Carg07063 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07063
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein trichome birefringence-like
Location	Cucurbita_argyrosperma_scaffold_065 : 1218390 .. 1221385 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAAGTAAGTCTTCTTTTTTTTTTCTCTGTCTTTATTGTTTTCCTCCATTATTGAATGTTGGCTTGGAGCCCTACAAATAATTTTCTCAGAGTAGATAATTACCATTTTAGCCCTCTTAGTTTTACGAGTCGAATAATTTCTAAGTTCAGTCCCTGAACTTTGGTTATCCGTTCAAATCTCACTGTAAATAATTACCTTTTTAACCCTTTTAGTTTTACGAGTGAGTAAATTACAAGTTTAGTCTCTAAATTTTGGTTAGATCTCACCGTAGATAATTACCATTTTAGCCCTTTTAGTTTTACGAGTCGAGTAAATTACAAGTTTAGTCTCTAAATCTTGGTTATCCCTTTAAACCTCACTGTAGATAATTACCGTTTTAGCTCTTTTAGTTTTATGAGTCGAATAAATTACAAGTTTGGTCCCTAAACTTTGGTTATCCCTTCAAATCTCACCGTTGATAAGTACCATTTTAACCCTGGTAGTTTTATGAGTTGAATAAATTACAAGTTCAGTCACTAAACTTTGGTTATCCCTTCCTATCTTACCATAGATAATTACCATTTTAGCCCTTTTAGTTTTACGAATGGAATAATTTTACAAATTTAGTCTCTAAACTTTTACATTTGTATCTATTTGGTTCTTCTGGTTATCCCTTTAGATCGCACGGTAGATAATTACCATTTTACCCCTTTTAGTTTTACTAGTTGAAAAAATTACAAATTTAGCCTCTAAACTTTTAGATTTCTATCTATTTGGTTCTTGAATTTTAAAAAGTGTCTAATAATAATAATAAATAAATCATAGAAATTATATAAAAAAACTTCGAACTTAAAGCATAATTCAACCAACTAAGTGATATATAGTTTGACGTTCTGAATTAAAAAAATAATTATATTTTAGCCTCTGAACTTTCAAGTTTATCCCATTTTTTAACCCCTCAATTTTCGAAGTGTCCATTTTGGTTAATGGGTTTTTAATTTTATTCCATCTTAGTCCATAAACTTTTAAAATGTCTAATTAAATAGACGTTTTAAAAGCGGAAGGACGAAAATGAGATTAAAAAAAATAAAAAGACCATTTTACCCCGAGGAGGAAAATATCTTACACAACTTTAACATAATCCAAACCTGTCGGTGGGACAGATCGATTTTGAGAATTATATATATAAACGTTTATATATATTTATTGTAAGATATTTTCAAGACATTTAAAAGGGAAATATAAATTGTAAATAAGGATGCTTCTTTGAAGCTTCCTGGTCCCACGTGTTGGGTTGTCTTAATTTCCTGAATTGAAAATGATATGAAATTAAAGCATCTTTCCAACATTATGTCTTATTCCCTGAATTTGGTAACATAAGTCATCTTAGGTTTTAGCTCTTATTTTATTTAATAAAGTATTAGTATGTGATTTGTTATCTCAAATGGTATCAGAGCGCTACGTTTTTCGATCTATTTAGATCATGTAGATCGGCCTATGATGTAGGCCCAACCAACTTCCATGGTCCTCTAGCAGATGTATTGGCACTGTAACAACGGGTGTAATACAATAATATATGTAGTAGATTACGAGAGTTAGATACTGGGTGATGTGCCAATGAGAAAGCTGAGCCCCAAAAAGGGATCGACACGAGGCGGTGTCCCAACAAGGACACTGGGTTCCGAAGGGGGTAGATTTGGGGGGTCACATATCGATTGGAGAATGGAACGAGTGTCAGCGAGGACGCTGGCCCCAAAGAGGGTGGATTGTGAGATCCCACATCATCAGTGGGGAGGAGAACAAAGCAGTCTTTATAAAAGTGTGAAAACCTCTCCAAATACGACAATATCTAGTGGTTGTGGGCTTGGATAGTTCCATTCATTGTTGTCATTAATGCCTAACTAATGATATCAAGATTTTTTTCTTCTTGACGTAGTCAATTCCCTTTCCCTCTTTGCAATACCACTGATTCTTTTCTGTCTGTTCATAGCATTGGTTTGAATGAACGGTTAAAATGTTGTATGCAACTAAACTTGTTCATGGTTGTGATTATCCGAACAGTCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAGATCATCAATCTTATTCTTCAATCATACTCAAATTTATTCTCTTCCCTCTCCTTTGATGTAATTCGTGGAGGAATATAGATTATTCGTAACGTAGGGGCACCATTACATTACAAAATAGTTTTACGTTCGTTGTACTTTACTTATCTGGTTCAATACGTCCTAAAGTTCTGTACCATATGGCTTGCCCAAGGTTGGGAAGCAACACTACAACATCCCATACTCAACAAGGTTCATGTTGCACGCCCGAAGGCACCTGGCAGAGAGGTTCATGTTGTATACTAACGAGGCTCATGTTGCATACTCAAAGGCACTTGACTCTGCCCCACCGTGCATGTTTCGTTGCTGTGTTACTGTCAAACACCCTCGACCTGAAATATTTATGGATTTATAAATTAAACGTTTAGGGTTTTATTAGACCAATCTTTAACTTT

mRNA sequence

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAATCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAGATCATCAATCTTATTCTTCAATCATACTCAAATTTATTCTCTTCCCTCTCCTTTGATGTAATTCGTGGAGGAATATAGATTATTCGTAACGTAGGGGCACCATTACATTACAAAATAGTTTTACGTTCGTTGTACTTTACTTATCTGGTTCAATACGTCCTAAAGTTCTGTACCATATGGCTTGCCCAAGGTTGGGAAGCAACACTACAACATCCCATACTCAACAAGGTTCATGTTGCACGCCCGAAGGCACCTGGCAGAGAGGTTCATGTTGTATACTAACGAGGCTCATGTTGCATACTCAAAGGCACTTGACTCTGCCCCACCGTGCATGTTTCGTTGCTGTGTTACTGTCAAACACCCTCGACCTGAAATATTTATGGATTTATAAATTAAACGTTTAGGGTTTTATTAGACCAATCTTTAACTTT

Coding sequence (CDS)

ATGAACGGTGTTGATTGTGTTTGTTTCAGGTGGGATTATATGGAATCTGGAGGATCATATTACCAAGACATGGATCGGTTGGCTGCAATGGAGAAGGGTCTAAGAACATGGGCTGATTGGGTTGATAAGAACATTGATGTTACTACAACAAGGGTTTTCTTCCAAGCTATCTCTCCCACTCATTACAATCCATCCGAATGGAACACCGGGACAACTTCGACGATGACAACAACAAAGAATTGCTATGGCGAAACGACACCGATGGGGGGGATGACGTACCCGGGTGGGTACCCAATTCAAATGAGGGTTGTGGATGAAGTGCTAAATGACATGAGGAATCCAGTGTACTTGTTGGACATAACAATGCTATCTGAGCTAAGAAAAGATGGGCACCCTTCCATTTACAGTGGTGATTTGAGCCCTGAGCAAAGGGCTAACCCTGGTAGATCAGCTGATTGTAGCCATTGGTGCCTTCCTGGGTTACCTGATACTTGGAACCAATTATTTTACACTGCTTTGTTCTTTTAG

Protein sequence

MNGVDCVCFRWDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF

Homology

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BLAST of Carg07063 vs. NCBI nr
Match: XP_022949350.1 (protein PMR5-like [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-95
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: XP_023521759.1 (protein PMR5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-95
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

[Close]

BLAST of Carg07063 vs. NCBI nr
Match: XP_022998581.1 (protein PMR5-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG
Sbjct: 223 WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 282

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           TTS MTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG
Sbjct: 283 TTSMMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 342

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 343 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 387

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BLAST of Carg07063 vs. NCBI nr
Match: XP_022150921.1 (protein PMR5 [Momordica charantia])

HSP 1 Score: 332.8 bits (852), Expect = 7.0e-88
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYY+DMDRLAAMEKGLRTWADWVDKNIDVT TRVFFQAISPTHYNPSEWNTG
Sbjct: 224 WDYMESGGSYYEDMDRLAAMEKGLRTWADWVDKNIDVTRTRVFFQAISPTHYNPSEWNTG 283

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T ST T +KNCYGET PMGGMTYP GYP QMR+VDEV+ DMRNPVYLLDITMLSELRKDG
Sbjct: 284 TASTTTMSKNCYGETVPMGGMTYPAGYPEQMRIVDEVIRDMRNPVYLLDITMLSELRKDG 343

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 344 HPSIYSGDLSPEQRANPQRSADCSHWCLPGLPDTWNQLFYTALFF 388

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BLAST of Carg07063 vs. NCBI nr
Match: XP_004145251.1 (PREDICTED: protein PMR5-like [Cucumis sativus] >KGN65821.1 hypothetical protein Csa_1G532290 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 5.0e-86
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRL AMEK LRTWADWV+KNIDV+ TRVFFQAISPTHYNPSEWNTG
Sbjct: 226 WDYMESGGSYYQDMDRLGAMEKALRTWADWVEKNIDVSRTRVFFQAISPTHYNPSEWNTG 285

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T S MT+TKNCYGET PMGG TYPGGYPIQMRVVDEV+ +MR PVYLLDITMLSELRKDG
Sbjct: 286 TASMMTSTKNCYGETAPMGGTTYPGGYPIQMRVVDEVIREMRKPVYLLDITMLSELRKDG 345

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDL+P+QRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 346 HPSIYSGDLNPQQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 390

[Close]

BLAST of Carg07063 vs. TAIR10
Match: AT2G30010.1 (TRICHOME BIREFRINGENCE-LIKE 45)

HSP 1 Score: 221.1 bits (562), Expect = 5.4e-58
Identity = 103/168 (61.31%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNT- 70
           W+ ME+GG YY DMDRL A+ KGL TW+ WV + I+   TRVFF ++SPTHYNP+EW + 
Sbjct: 231 WEQMETGGRYYGDMDRLVALRKGLGTWSSWVLRYINSPLTRVFFLSVSPTHYNPNEWTSR 290

Query: 71  GTTSTMTT-TKNCYGETTPMGGMTYP-GGYPIQMRVVDEVLNDMRNPVYLLDITMLSELR 130
             TST+T   K+CYG+TTP  G TYP   Y  Q +V+D+V+ +M++ V L+DITMLS LR
Sbjct: 291 SKTSTITQGGKSCYGQTTPFSGTTYPTSSYVNQKKVIDDVVKEMKSHVSLMDITMLSALR 350

Query: 131 KDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
            DGHPSIYSGDL+P  + NP RS+DCSHWCLPGLPDTWNQLFY AL +
Sbjct: 351 VDGHPSIYSGDLNPSLKRNPDRSSDCSHWCLPGLPDTWNQLFYAALLY 398

[Close]

BLAST of Carg07063 vs. TAIR10
Match: AT5G58600.1 (Plant protein of unknown function (DUF828))

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-56
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD ++SG SYYQDMDR  AMEK LRTWA WV+ ++D + T+V F +ISPTH NPS+W   
Sbjct: 239 WDLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDW--- 298

Query: 71  TTSTMTTTKNCYGETTPMGGMTYP-GGYPIQMR-VVDEVLNDMRNPVYLLDITMLSELRK 130
             S+ + +KNCYGET P+ G  YP   Y  Q+R V+ EVL+ M NP +LLDIT+LS LRK
Sbjct: 299 AASSSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRK 358

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPS+YSG +S  QR+ P +SADCSHWCLPGLPDTWNQL YT L +
Sbjct: 359 DGHPSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402

[Close]

BLAST of Carg07063 vs. TAIR10
Match: AT1G29050.1 (TRICHOME BIREFRINGENCE-LIKE 38)

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDY+  G S  +DM+RL A  KGL TWA WVD+N+D   TRVFFQ ISPTHY   EWN  
Sbjct: 233 WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWN-- 292

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+GG +YP G P    VV +VL+ M+ PV LLDIT LS+LRKD 
Sbjct: 293 -----EPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 352

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 353 HPSSYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 378

[Close]

BLAST of Carg07063 vs. TAIR10
Match: AT2G34070.1 (TRICHOME BIREFRINGENCE-LIKE 37)

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD++  G S  +DMDRL A  KGL TW  WVD+N++V+ TRVFFQ ISPTHY   EWN  
Sbjct: 238 WDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWN-- 297

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+ G TYPGG      +V  VL+ MR PVYLLDIT LS+LRKD 
Sbjct: 298 -----EPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDA 357

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 358 HPSTYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 383

[Close]

BLAST of Carg07063 vs. TAIR10
Match: AT2G31110.2 (Plant protein of unknown function (DUF828))

HSP 1 Score: 177.6 bits (449), Expect = 6.9e-45
Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYM  G   Y+DM+RL A  KGL TWA W++ NI  + T+VFFQ +SP HY+  EWN  
Sbjct: 216 WDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRTQVFFQGVSPVHYDGREWN-- 275

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K+C G+T P  G  YPGG P+   VV++VL+ +R PV+LLD+T LSE RKD 
Sbjct: 276 -----EPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHLLDLTTLSEYRKDA 335

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Sbjct: 336 HPSLYNG---------ISKDLDCSHWCLPGLPDTWNLLLYSSL 362

[Close]

BLAST of Carg07063 vs. Swiss-Prot
Match: sp|O80872|TBL45_ARATH (Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.8e-57
Identity = 103/168 (61.31%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNT- 70
           W+ ME+GG YY DMDRL A+ KGL TW+ WV + I+   TRVFF ++SPTHYNP+EW + 
Sbjct: 231 WEQMETGGRYYGDMDRLVALRKGLGTWSSWVLRYINSPLTRVFFLSVSPTHYNPNEWTSR 290

Query: 71  GTTSTMTT-TKNCYGETTPMGGMTYP-GGYPIQMRVVDEVLNDMRNPVYLLDITMLSELR 130
             TST+T   K+CYG+TTP  G TYP   Y  Q +V+D+V+ +M++ V L+DITMLS LR
Sbjct: 291 SKTSTITQGGKSCYGQTTPFSGTTYPTSSYVNQKKVIDDVVKEMKSHVSLMDITMLSALR 350

Query: 131 KDGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
            DGHPSIYSGDL+P  + NP RS+DCSHWCLPGLPDTWNQLFY AL +
Sbjct: 351 VDGHPSIYSGDLNPSLKRNPDRSSDCSHWCLPGLPDTWNQLFYAALLY 398

[Close]

BLAST of Carg07063 vs. Swiss-Prot
Match: sp|Q9LUZ6|TBL44_ARATH (Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.1e-55
Identity = 102/167 (61.08%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD ++SG SYYQDMDR  AMEK LRTWA WV+ ++D + T+V F +ISPTH NPS+W   
Sbjct: 239 WDLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDW--- 298

Query: 71  TTSTMTTTKNCYGETTPMGGMTYP-GGYPIQMR-VVDEVLNDMRNPVYLLDITMLSELRK 130
             S+ + +KNCYGET P+ G  YP   Y  Q+R V+ EVL+ M NP +LLDIT+LS LRK
Sbjct: 299 AASSSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRK 358

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPS+YSG +S  QR+ P +SADCSHWCLPGLPDTWNQL YT L +
Sbjct: 359 DGHPSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402

[Close]

BLAST of Carg07063 vs. Swiss-Prot
Match: sp|O22960|TBL37_ARATH (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WD++  G S  +DMDRL A  KGL TW  WVD+N++V+ TRVFFQ ISPTHY   EWN  
Sbjct: 238 WDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWN-- 297

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+ G TYPGG      +V  VL+ MR PVYLLDIT LS+LRKD 
Sbjct: 298 -----EPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDA 357

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 358 HPSTYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 383

[Close]

BLAST of Carg07063 vs. Swiss-Prot
Match: sp|Q8VY22|TBL38_ARATH (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-46
Identity = 90/163 (55.21%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDY+  G S  +DM+RL A  KGL TWA WVD+N+D   TRVFFQ ISPTHY   EWN  
Sbjct: 233 WDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWN-- 292

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K C G+  P+GG +YP G P    VV +VL+ M+ PV LLDIT LS+LRKD 
Sbjct: 293 -----EPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDA 352

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS Y GD             DCSHWCLPGLPDTWNQL Y AL
Sbjct: 353 HPSSYGGD----------GGTDCSHWCLPGLPDTWNQLLYAAL 378

[Close]

BLAST of Carg07063 vs. Swiss-Prot
Match: sp|Q67XC4|TBL40_ARATH (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 83/163 (50.92%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYM  G   Y+DM+RL A  KGL TWA W++ NI  + T+VFFQ +SP HY+  EWN  
Sbjct: 216 WDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRTQVFFQGVSPVHYDGREWN-- 275

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                   K+C G+T P  G  YPGG P+   VV++VL+ +R PV+LLD+T LSE RKD 
Sbjct: 276 -----EPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHLLDLTTLSEYRKDA 335

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTAL 174
           HPS+Y+G           +  DCSHWCLPGLPDTWN L Y++L
Sbjct: 336 HPSLYNG---------ISKDLDCSHWCLPGLPDTWNLLLYSSL 362

[Close]

BLAST of Carg07063 vs. TrEMBL
Match: tr|A0A0A0M0U4|A0A0A0M0U4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.3e-86
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRL AMEK LRTWADWV+KNIDV+ TRVFFQAISPTHYNPSEWNTG
Sbjct: 226 WDYMESGGSYYQDMDRLGAMEKALRTWADWVEKNIDVSRTRVFFQAISPTHYNPSEWNTG 285

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T S MT+TKNCYGET PMGG TYPGGYPIQMRVVDEV+ +MR PVYLLDITMLSELRKDG
Sbjct: 286 TASMMTSTKNCYGETAPMGGTTYPGGYPIQMRVVDEVIREMRKPVYLLDITMLSELRKDG 345

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDL+P+QRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 346 HPSIYSGDLNPQQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 390

[Close]

BLAST of Carg07063 vs. TrEMBL
Match: tr|A0A1S3C4W9|A0A1S3C4W9_CUCME (protein PMR5-like OS=Cucumis melo OX=3656 GN=LOC103497067 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 5.3e-84
Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWN-- 70
           WDYMESGGSYYQDMDRL AMEK LRTWADWV+KNIDV+ TRVFFQAISPTHYNPSEWN  
Sbjct: 226 WDYMESGGSYYQDMDRLGAMEKALRTWADWVEKNIDVSRTRVFFQAISPTHYNPSEWNTG 285

Query: 71  TGTTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRK 130
           TGT S MT+TKNCYGET PMGG TYPG YPIQMRVVDEV+ +MR PVYLLDITMLSELRK
Sbjct: 286 TGTASMMTSTKNCYGETAPMGGTTYPGAYPIQMRVVDEVIREMRKPVYLLDITMLSELRK 345

Query: 131 DGHPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           DGHPSIYSGDL+P+QRANP RSADCSHWCLPGLPDTWNQLFYTALFF
Sbjct: 346 DGHPSIYSGDLNPQQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 392

[Close]

BLAST of Carg07063 vs. TrEMBL
Match: tr|A0A1Q3BEY9|A0A1Q3BEY9_CEPFO (PC-Esterase domain-containing protein/PMR5N domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10106 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-77
Identity = 137/165 (83.03%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGGSYYQDMDRL A+E+GLRTWA+WVD NID T TRVFFQ+ISPTHYNPSEW+TG
Sbjct: 198 WDYMESGGSYYQDMDRLVALEEGLRTWANWVDTNIDRTRTRVFFQSISPTHYNPSEWSTG 257

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
                TTTKNCYGET P+ G TYPG +P QMRVVD V+ DM NP +LLDITMLSELRKDG
Sbjct: 258 --GGTTTTKNCYGETAPVIGTTYPGAFPNQMRVVDVVIRDMHNPPFLLDITMLSELRKDG 317

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALF+
Sbjct: 318 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFY 360

[Close]

BLAST of Carg07063 vs. TrEMBL
Match: tr|A0A2K1Z493|A0A2K1Z493_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G072800v3 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.4e-76
Identity = 133/165 (80.61%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGG++YQDMDRL A+E+GLRTWA WVD NID T TRVFFQ+ISPTHYNPSEW+ G
Sbjct: 232 WDYMESGGTFYQDMDRLVALERGLRTWAKWVDSNIDTTRTRVFFQSISPTHYNPSEWSAG 291

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
           T  T+ TT+NCYGETTPM GMTYPG YP QMRVVD V+  M  P YLLDITMLSELRKDG
Sbjct: 292 T--TVATTRNCYGETTPMNGMTYPGAYPDQMRVVDTVIRGMHTPAYLLDITMLSELRKDG 351

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALFF 176
           HPSIYSGDLSP+QRA+P  SADCSHWCLPGLPDTWNQLFY ALFF
Sbjct: 352 HPSIYSGDLSPQQRADPSGSADCSHWCLPGLPDTWNQLFYAALFF 394

[Close]

BLAST of Carg07063 vs. TrEMBL
Match: tr|A0A2I4FV86|A0A2I4FV86_9ROSI (protein PMR5-like OS=Juglans regia OX=51240 GN=LOC109002326 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.3e-76
Identity = 133/164 (81.10%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 11  WDYMESGGSYYQDMDRLAAMEKGLRTWADWVDKNIDVTTTRVFFQAISPTHYNPSEWNTG 70
           WDYMESGG +YQDMDRLAA++KGLRTWA+WVD NID T T+VFF +ISPTHYNPSEWN G
Sbjct: 230 WDYMESGGKFYQDMDRLAALDKGLRTWANWVDTNIDSTRTKVFFMSISPTHYNPSEWNVG 289

Query: 71  TTSTMTTTKNCYGETTPMGGMTYPGGYPIQMRVVDEVLNDMRNPVYLLDITMLSELRKDG 130
            TS  +TTKNCYGET P+ G TYPG YP QMRVVD V+ DM NP YLLDITMLSELRKDG
Sbjct: 290 ATS--STTKNCYGETVPITGTTYPGTYPDQMRVVDSVIRDMHNPAYLLDITMLSELRKDG 349

Query: 131 HPSIYSGDLSPEQRANPGRSADCSHWCLPGLPDTWNQLFYTALF 175
           HPSIYSGDLSP+QRANP RSADCSHWCLPGLPDTWNQLFY  LF
Sbjct: 350 HPSIYSGDLSPKQRANPARSADCSHWCLPGLPDTWNQLFYNTLF 391

The following BLAST results are available for this feature:

BLAST of Carg07063 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949350.1	2.0e-95	100.00	protein PMR5-like [Cucurbita moschata]	[more]
XP_023521759.1	2.0e-95	100.00	protein PMR5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998581.1	1.0e-94	99.39	protein PMR5-like [Cucurbita maxima]	[more]
XP_022150921.1	7.0e-88	92.12	protein PMR5 [Momordica charantia]	[more]
XP_004145251.1	5.0e-86	89.70	PREDICTED: protein PMR5-like [Cucumis sativus] >KGN65821.1 hypothetical protein ...	[more]

BLAST of Carg07063 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30010.1	5.4e-58	61.31	TRICHOME BIREFRINGENCE-LIKE 45	[more]
AT5G58600.1	1.7e-56	61.08	Plant protein of unknown function (DUF828)	[more]
AT1G29050.1	1.5e-47	55.21	TRICHOME BIREFRINGENCE-LIKE 38	[more]
AT2G34070.1	1.5e-47	55.21	TRICHOME BIREFRINGENCE-LIKE 37	[more]
AT2G31110.2	6.9e-45	50.92	Plant protein of unknown function (DUF828)	[more]

BLAST of Carg07063 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80872\|TBL45_ARATH	9.8e-57	61.31	Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 ...	[more]
sp\|Q9LUZ6\|TBL44_ARATH	3.1e-55	61.08	Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1	[more]
sp\|O22960\|TBL37_ARATH	2.7e-46	55.21	Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 ...	[more]
sp\|Q8VY22\|TBL38_ARATH	2.7e-46	55.21	Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 ...	[more]
sp\|Q67XC4\|TBL40_ARATH	1.2e-43	50.92	Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 ...	[more]

BLAST of Carg07063 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0U4\|A0A0A0M0U4_CUCSA	3.3e-86	89.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=4 SV=1	[more]
tr\|A0A1S3C4W9\|A0A1S3C4W9_CUCME	5.3e-84	88.02	protein PMR5-like OS=Cucumis melo OX=3656 GN=LOC103497067 PE=4 SV=1	[more]
tr\|A0A1Q3BEY9\|A0A1Q3BEY9_CEPFO	1.7e-77	83.03	PC-Esterase domain-containing protein/PMR5N domain-containing protein OS=Cephalo...	[more]
tr\|A0A2K1Z493\|A0A2K1Z493_POPTR	2.4e-76	80.61	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G072800v3 PE=...	[more]
tr\|A0A2I4FV86\|A0A2I4FV86_9ROSI	5.3e-76	81.10	protein PMR5-like OS=Juglans regia OX=51240 GN=LOC109002326 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029962	TBL
IPR029981	TBL45/PMR5
IPR026057	PC-Esterase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07063-RA	Carg07063-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 10..171 e-value: 6.0E-52 score: 177.0
IPR029981	Trichome birefringence-like 45/PMR5	PANTHER	PTHR32285:SF14	PROTEIN PMR5-RELATED	coord: 10..175
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	FAMILY NOT NAMED	coord: 10..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07063	Cucsa.151620	Cucumber (Gy14) v1	carcgyB0602
Carg07063	CsaV3_1G036320	Cucumber (Chinese Long) v3	carcucB0556
Carg07063	Cla97C03G051430	Watermelon (97103) v2	carwmbB0545
Carg07063	Bhi08G000408	Wax gourd	carwgoB0630

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07063	Silver-seed gourd	carcarB497
Carg07063	Cucumber (Gy14) v2	carcgybB0525
Carg07063	Cucurbita maxima (Rimu)	carcmaB0728
Carg07063	Cucurbita maxima (Rimu)	carcmaB0731
Carg07063	Cucurbita moschata (Rifu)	carcmoB0705
Carg07063	Cucurbita moschata (Rifu)	carcmoB0708
Carg07063	Cucurbita pepo (Zucchini)	carcpeB0737
Carg07063	Cucurbita pepo (Zucchini)	carcpeB0739
Carg07063	Wild cucumber (PI 183967)	carcpiB0557
Carg07063	Cucumber (Chinese Long) v2	carcuB0550
Carg07063	Bottle gourd (USVL1VR-Ls)	carlsiB472
Carg07063	Melon (DHL92) v3.5.1	carmeB0522
Carg07063	Melon (DHL92) v3.6.1	carmedB0528
Carg07063	Watermelon (Charleston Gray)	carwcgB0504
Carg07063	Watermelon (97103) v1	carwmB0515