Carg07054 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07054
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription termination factor family protein
Location	Cucurbita_argyrosperma_scaffold_065 : 1167314 .. 1173747 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTGGGCTTCGTCGCCTCATTTCATTGCAGGGTTTTACCAAGATTTTAACAATGTCCGCAGTGACGGCCAGGCTCACAGCTTCCAGTTCTCAGTAACCTCAACAATGGCTTCCGTCTTCTTCCCCATTCCAACCATTCATCGTAGCTTTAAATCTTCAACTCCCATTCCAATCAATCGCTTCTCCCTTTCCCAACCTCGCTCCCTCCTTCCTCTCGATTCCTGCCCCTTCCGTTCCTGCTTTCACTTCTCCTCCACGTCTTCCCGTTTCATCCCCCTCGCCTCCACTTCCTCCGATGTCCCTCCAGACGACTCACTCCATTCTTTGGAAGAAGCTCGACTTGCTGTTTCCGAGTATCTTCAACGATTAGGGGTTTCCGAGGAGGAATCCGTGTCCATCGCCTCCAATTCACCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTTCTTGGAGTAGCGAAGGAGAACGGCCGGTAGGTGATGGCTTTGGGTTTAAGGAAAAGGTGGCGTTGATGGCCAGAGAAAAGGGTGATAATGGAAAGGTTGCTTTCTTGGAGAGCGCTGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGAGAGATGCTTCCATCTCTAATTTACAAGGTAGTAGGTCGCTATATTTGTTGTTTAGTAGTCTTTTAGAACTAATACCAGTTGTTCTTCAATAAACGGATTCAAAATGCCTGAGATCTTATTTTACTTGAGTTGGTATCTGATTGATAAGTTCGTCGACGATGGTTTATTTTTAAATTTTCTCTTTAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAATTCATAGGAAAAAGTGCTCGCCGAATGATGACGAACTTATCAATTCCTCCTGATGATGATGTGCAGCAGACTCTATCCTTTTTCGAGAAGGTCTTGTAACATTTTTCAATTTCCAAGTTGTTAACTTATTTTGGATTTATACATTGTAAGACGTGTTTTTGAATATCATCACAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCGAATGAAGAATCCTTCCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAATACAATCCCATGTGAAACCCATGGTGGAATTTCTTGAAGCCATTGGCATCCCTAAGGAGCGCATGAGAGGCATATTTCTGTCATTTCCACCCATAATTTTCTTCGGTACTGAAGTTCTGAAGTCAAGGATAATGACTTTTGAGAAGGTACTATTGATCAAAAGAAAGAGAAATTTCTTTGATTTTATTTTGCTAGAGCCTTCTTTCTGTTACTATGGCTTAGAAGGAAGAATTCAACAACACAGAAAATTAATCCCAACATTTTTGTCATTCGCTTACGTTTGTGGCACTTGGAATGAATTTTATAATCCTTTTAACTACTGCAACATAAGTTCTCTTTGTGCCACTGGGAACAGCTTATTGTAGTCTTCATTTGCTTCGAAGCTTGGTGTCTTCCTTTTTTGTAGTTTCACTTTTTTTTCAATGAATATAGTTTCTTATATCGAAGAAAAAAGATAACTGAACAGTATACTGTTATGTTGATATTCTCTCATCACTGATCTTCAATTATCCTGTAGGTTGGCATAGTAGAGATGGAATTTGGTAAATTATTACCTAAATATCCATGGATTACGTCCAATTGCATCCAAGGCAACCTTAAACAAATTGTTTCTTTCTTTGAATTGGAGAAGGTACGCCTTCCGTCTAGTCATTCAATCTTGCTTGTACTAATTAGATTAATTGCATGTTTTAAAATCCTCTCTCAAAAGAATTTGATATACAACTATGCCCGTGAGCGCCATTGGTTAATATTTTGAATTTCATTGCAGCTTCAGCTGATGTGCTAACCATTCTACTTCTCATATGCTTATTTAAGAATTGACTAGTATATCTTTTGCAAGTTGAGTGAAAATAAGTAAAATTGTAAGGAAAAAGCAGAGATTGTAATTGGGCCAAACTGCAACTTTCCTCGGGAAGGCTTCAATTGAGAATCCGTTATTTGGAGACTTTTCTTTGGGAAGGAACTCAAGTGAAAGGTGGATTCCACTGGTAAAAATTGGGCCAACATTTAGTTTCCGCTTGAGTTTGGGGTGGTTGGCATTGAAATATAAGGATAAGGAATCATTCTCGTCTTGCAAAACGGCCATGGAAATTCCAGTTTGAGAGAGAGGATTAGTGGAAATTCCACTTCGAGAAAGAAGCTTAATGGAGAAAAGCTACTGTGGCTAAATTTTGAACCACCACCCATGCTTCTTGGCTGGGCACTTCAAACTTCCTATGGTCTTGAACAGGATGGGAGTATTTGTGAGAAATCACAGTTCTCTTTCTGAATGATTTTTGTATTTGTAACGAACCCTTTCAAAGACTTCACCAAGAATATTCTATCTTTTCATTTGGAAAATCTCTTTTATCAAAGAAAGTTGCAATTCCCAGCTCAAAATTTGGGACCTCGATTATTGAAGTACTTTCTTGGACATGTAATCCAAGATGGGCCTCTATCTCTAATTTGGTCGCCTGTTTCTCCATAAACTCTCTTCCCTTGTACAAATGGATGTATCTGACAATACAAGGGTTTTCTTACGCAAGTTTTTTCTTGAAGAACACTATGAGCAAGGGTGTCTCAAAGAAACGTTTTCAACCTCCTAGTTCAGTTGGCTCTTGATGGTAGCACTCACATTTCTTTGGTCTTCCTCTTCTCTTTGCCTTTGTGGTTTGAGCTATCCCCTCCTATCTTGTCTTCCTTCATTTTTGTGCTGTCCATCCATATCCTTCTTGTTTGCCTTCTATCTCCATCTCCTCTCCCTAGGATTTCATTTTTTTGCCTCCTAGGACTCAACTCCGAGATGAAGTTGTTTGGGAATATGATGAGGTACATTTGCGTGAAAAATCTTAGTGGAATATATGATGTTAGTTGGAACTTGTAGCGCTTATATGTAATGTTTGATGTTAGTTTGGTCCTGTGTTAGATTTACTGCATATTTTGGGCATTTACCAAGGATTCTTATAGTTCTTCTTTTGGACTTTCACTTTTGGATGTAAATTGTTTGTAGTCTAGGTTTTGGTTGGCCTCTTCTTGCCGTGTAATTGTTTTTTAGTAGGCCTCTTGTTTTCTTTCACTCGGTGAAATCTCAGCCTTCCTGTCACAAAGAATCTGTCAACCTTGTTCATTTTGATTCGGTGGGTGAACACCTTGGGTTGTCTTTTGGGGCATTTGTCCTCTGTGCTGAATCTGCATTGGTGCATTTTTGTAAGAGGACAGTCTAAGACTTGAATCATGTTGTATGGAGCTGTTCTGTCTTTTGGGCTTGTTTGTTAGTTATTCAATTGGTTGGGCAAGGAACAAAGTTCGCAGCTCTATCGTAGAGGAAGTTCTTCATAATTTTCCCTTTTGTAATAGGGGCCATATTTTATGGTAGGTTTGTGGGCAAAAGGAATTATAGAATTTTAAAGAACTTTTAAGAATGTTGATAGATCGTGAATGTCAAATGTGTTACTCTTGTTTGGAATTTGGCAACAACTTAAATATGTATTTTACATTTTTTTAATGATTTTTTAATTATTATTATTTAAAATGATGCTTACGCCTCATATTGCTTCAAGGCCTCACCTCATTTTGAGAAAATGCCTCAAGGTTCTCTTAAGCCTTTTAATTTAAAACATTGATTTTAGCCCACAACAAGGGCATTTTTTTTTTTACTTTTTAAGTTATAATTTACCAGATAGATAGCCCCTGACCGGTACTTGTCTGAAGTTGGGAGACATAACCCGTGCAATCTTATGTTTTCACTTTTTAAAATTTAGAATCTAAAATGGTTGAAACTTGAAACATATTAATTTTACTTTCAAAGTTTCTACTTCTTAAATAAAAATATATAAACTATTTTAAATATGATCCCACAAATACAGAAATTTACTAGACCAATTTTAGTTCATATATTTGCAAACAGTACACATGATGATTTTTTGTTGTTTTTCCCCCCAATTAGCATGGTTTTGTATTAGGCGTCCTTAAGGCTGTTGAAAGTCTGTTAATGTAACGAATGTCACCTGTATATATGGAAATTCTTGTTTACGAGATGATATTTCATGACAGGTACCAAATGCAAGCATCACTGATGCAATCAGGAGTTGGCCACTGATTTTAGGAAGCTCCGCTAGTAAATTGGAATTGATGGTGGACAGCTTTGATGAGCTTGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGTTATTACTCCAGAGACCTCAAGAATTTCTTCAGGTTGGTAACTTCTATTCTTTACGAGTCGTTGTTTCCTGTATTGCAATCAGAGATGATAGATTCATGAATACTTCTATGCTAGTGGCTTTTATAATTTTTCTTTATTTTTAATTGCTTTCGAGCTTCTGAAATTTATAAATATAATTTGCAAATACAGGTCGTTTCATACTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATACTTGCTCGTTGTCCAGAGATATTTGCAACTAGTGTTGAGAAAACACTAAGGAGGAAGCTTGAATTTCTAATCAGTATTGGTGTTTCCAAGACTCATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACAGAACTTTATTCCCACGGTAATGCTGAGACTTTACTTCTATGTATATATATATATGTGTGTGTGTGTGTGTGTGTTGATGTGGTTGAATTGGAGTGCATAGCTTCCATGGATGAGGCATCTTATACTAGAGTTAATTAATTTTATGCAACAAACATGTACACAGTGATCAAATTAAAAGATTCTCAAATTAATTTATGAAAACTATATAATTGAAAAGTTAAAATTGTAATTGAAGATGATAAATATCAACTTCACTCTCAAATATATTTAGTATACTTAAAACAGTCCCAGAAAAGGTATTTGACAATTTGATTAAATGCTACAATCAGAGATTAAAAACCAATAATATAAAATTAGATCATATATTGTTTTCCTTTTACAAGAAGTAGCAATTATAAAATTCCATCTGGAAATGAGGGGCAAGATAAGAAAGTCATCAACAGAGAGGTGTCACTATATAGTTTGTCTCTAAACATGTATATGCTAAGGGATAAAAAGGTTTATCATTTATGAAAGATTATAAATTGAAGATAAAAACTTCTATCTAAATTTATTGTGGTTATAGTTGAAATTGTCATGGATCCTTACACTTCATTATTCTGTTATATGATGTGCTGGCCTAAATTTTAATAATGATCACAATATTTGCAGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAAAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAAGTATTGAAACCCAAACTAGATTTCCTTGTAAACGTCATGGAGAAGCCAATAAAGGAAGTGGTCGAGTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCGAGGTTCCGGGTGTTAAAGGAGAGGAATATAGAATGCAATCTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTATGTTTATGGGCGACAAAGGAACGTAATATTATTTAAGTTCTTCACCCACTGAAGTGTAAGAAATTTTGTCTCTAGTCATAAAGTTGTGTAAATAATCTCCTACCTTTTTAGGATACTATTTGTAGATTATATTCAGTCAAATGGCCAAGCCAGTTTCAATTTTTGGGTTCTAATAGGGAGGGATCTAGGCTGGATCCGTGTAGAACTTATATCGCGTTCGTATTAATGTTCTCCTTTTCACTACATGCCATGATACCATTTGAAAGTTGAGGATGTGAAAGCTTATTAGCTAGCTCGGAGGTCATCGGTGCGCGCCAGCATACAAACAAAGCAATTCAAGCTTTAGGTATGTTTTAATTCATCACCAACACTATTTCCTCGTTGATTTCGTTTCTAGAACATATATATATGATTTGAGATATCATATTTTCTTTGATGAAGTAAATTTTACAGAATCTATCTAGCCTAGCCCTCAAAAGCTTTATTAGTAGATGGTTAGATTGAGTTACGGCTAGGAAGGCCTTGAAAGGATTGATGATGCCAGTTCTTTTGAACAAATGGGTACAAATATTTGAACCTCTTGCCTTAAGAGGAGGGAGGAGTATATATCAACTACGGTAGCTCAACTTAAATGTTGTGTTATTAATAATTCATTGTTTGTGTTACATGATTCTTTATATATATGATTGCAGCAAGCTTTGGTGAACTACTGGTGAGTGGCATTGTCAGCTTAACGACACGAGAAGAAACAAATCAAGCTTTCGAGTTTTTAACGAG

mRNA sequence

CGGTGGGCTTCGTCGCCTCATTTCATTGCAGGGTTTTACCAAGATTTTAACAATGTCCGCAGTGACGGCCAGGCTCACAGCTTCCAGTTCTCAGTAACCTCAACAATGGCTTCCGTCTTCTTCCCCATTCCAACCATTCATCGTAGCTTTAAATCTTCAACTCCCATTCCAATCAATCGCTTCTCCCTTTCCCAACCTCGCTCCCTCCTTCCTCTCGATTCCTGCCCCTTCCGTTCCTGCTTTCACTTCTCCTCCACGTCTTCCCGTTTCATCCCCCTCGCCTCCACTTCCTCCGATGTCCCTCCAGACGACTCACTCCATTCTTTGGAAGAAGCTCGACTTGCTGTTTCCGAGTATCTTCAACGATTAGGGGTTTCCGAGGAGGAATCCGTGTCCATCGCCTCCAATTCACCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTTCTTGGAGTAGCGAAGGAGAACGGCCGGTAGGTGATGGCTTTGGGTTTAAGGAAAAGGTGGCGTTGATGGCCAGAGAAAAGGGTGATAATGGAAAGGTTGCTTTCTTGGAGAGCGCTGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGAGAGATGCTTCCATCTCTAATTTACAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAATTCATAGGAAAAAGTGCTCGCCGAATGATGACGAACTTATCAATTCCTCCTGATGATGATGTGCAGCAGACTCTATCCTTTTTCGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCGAATGAAGAATCCTTCCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAATACAATCCCATGTGAAACCCATGGTGGAATTTCTTGAAGCCATTGGCATCCCTAAGGAGCGCATGAGAGGCATATTTCTGTCATTTCCACCCATAATTTTCTTCGGTACTGAAGTTCTGAAGTCAAGGATAATGACTTTTGAGAAGGTTGGCATAGTAGAGATGGAATTTGGTAAATTATTACCTAAATATCCATGGATTACGTCCAATTGCATCCAAGGCAACCTTAAACAAATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATCACTGATGCAATCAGGAGTTGGCCACTGATTTTAGGAAGCTCCGCTAGTAAATTGGAATTGATGGTGGACAGCTTTGATGAGCTTGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGTTATTACTCCAGAGACCTCAAGAATTTCTTCAGGTCGTTTCATACTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATACTTGCTCGTTGTCCAGAGATATTTGCAACTAGTGTTGAGAAAACACTAAGGAGGAAGCTTGAATTTCTAATCAGTATTGGTGTTTCCAAGACTCATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACAGAACTTTATTCCCACGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAAAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAAGTATTGAAACCCAAACTAGATTTCCTTGTAAACGTCATGGAGAAGCCAATAAAGGAAGTGGTCGAGTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCGAGGTTCCGGGTGTTAAAGGAGAGGAATATAGAATGCAATCTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTATGTTTATGGGCGACAAAGGAACGTAATATTATTTAAGTTCTTCACCCACTGAAGTGTAAGAAATTTTGTCTCTAGTCATAAAGTTGTGTAAATAATCTCCTACCTTTTTAGGATACTATTTGTAGATTATATTCAGTCAAATGGCCAAGCCAGTTTCAATTTTTGGGTTCTAATAGGGAGGGATCTAGGCTGGATCCGTGTAGAACTTATATCGCGTTCGTATTAATGTTCTCCTTTTCACTACATGCCATGATACCATTTGAAAGTTGAGGATGTGAAAGCTTATTAGCTAGCTCGGAGGTCATCGGTGCGCGCCAGCATACAAACAAAGCAATTCAAGCTTTAGGTATGTTTTAATTCATCACCAACACTATTTCCTCGTTGATTTCGTTTCTAGAACATATATATATGATTTGAGATATCATATTTTCTTTGATGAAGTAAATTTTACAGAATCTATCTAGCCTAGCCCTCAAAAGCTTTATTAGTAGATGGTTAGATTGAGTTACGGCTAGGAAGGCCTTGAAAGGATTGATGATGCCAGTTCTTTTGAACAAATGGGTACAAATATTTGAACCTCTTGCCTTAAGAGGAGGGAGGAGTATATATCAACTACGGTAGCTCAACTTAAATGTTGTGTTATTAATAATTCATTGTTTGTGTTACATGATTCTTTATATATATGATTGCAGCAAGCTTTGGTGAACTACTGGTGAGTGGCATTGTCAGCTTAACGACACGAGAAGAAACAAATCAAGCTTTCGAGTTTTTAACGAG

Coding sequence (CDS)

CGGTGGGCTTCGTCGCCTCATTTCATTGCAGGGTTTTACCAAGATTTTAACAATGTCCGCAGTGACGGCCAGGCTCACAGCTTCCAGTTCTCAGTAACCTCAACAATGGCTTCCGTCTTCTTCCCCATTCCAACCATTCATCGTAGCTTTAAATCTTCAACTCCCATTCCAATCAATCGCTTCTCCCTTTCCCAACCTCGCTCCCTCCTTCCTCTCGATTCCTGCCCCTTCCGTTCCTGCTTTCACTTCTCCTCCACGTCTTCCCGTTTCATCCCCCTCGCCTCCACTTCCTCCGATGTCCCTCCAGACGACTCACTCCATTCTTTGGAAGAAGCTCGACTTGCTGTTTCCGAGTATCTTCAACGATTAGGGGTTTCCGAGGAGGAATCCGTGTCCATCGCCTCCAATTCACCTCGGTTCTTGAAGATGCTCGTTGATGGAGTTCGTGAATTGGACGAGACGTCCATGTGGATTTCTTGGAGTAGCGAAGGAGAACGGCCGGTAGGTGATGGCTTTGGGTTTAAGGAAAAGGTGGCGTTGATGGCCAGAGAAAAGGGTGATAATGGAAAGGTTGCTTTCTTGGAGAGCGCTGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGAGAGATGCTTCCATCTCTAATTTACAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAATTCATAGGAAAAAGTGCTCGCCGAATGATGACGAACTTATCAATTCCTCCTGATGATGATGTGCAGCAGACTCTATCCTTTTTCGAGAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCGAATGAAGAATCCTTCCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAATACAATCCCATGTGAAACCCATGGTGGAATTTCTTGAAGCCATTGGCATCCCTAAGGAGCGCATGAGAGGCATATTTCTGTCATTTCCACCCATAATTTTCTTCGGTACTGAAGTTCTGAAGTCAAGGATAATGACTTTTGAGAAGGTTGGCATAGTAGAGATGGAATTTGGTAAATTATTACCTAAATATCCATGGATTACGTCCAATTGCATCCAAGGCAACCTTAAACAAATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATCACTGATGCAATCAGGAGTTGGCCACTGATTTTAGGAAGCTCCGCTAGTAAATTGGAATTGATGGTGGACAGCTTTGATGAGCTTGGTGTTCGAAGCAAGAAGTTGGGTCAGGTGATTGCCACAAGTCCTCAGTTATTACTCCAGAGACCTCAAGAATTTCTTCAGGTCGTTTCATACTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATACTTGCTCGTTGTCCAGAGATATTTGCAACTAGTGTTGAGAAAACACTAAGGAGGAAGCTTGAATTTCTAATCAGTATTGGTGTTTCCAAGACTCATCTACCTCGGGCAATTAGAAAATATCCTGAGCTTCTCGTGTCTGACCCTGACAGAACTTTATTCCCACGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAAAGAGGGATATTGCCTTCATGGTTGGTAGATTCTCTCCTCTACTGGGGTATAGTATAGAGGAAGTATTGAAACCCAAACTAGATTTCCTTGTAAACGTCATGGAGAAGCCAATAAAGGAAGTGGTCGAGTATCCAAGGTATTTTAGCTATTCGTTGGAAAAGAAGATAACTCCGAGGTTCCGGGTGTTAAAGGAGAGGAATATAGAATGCAATCTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTATGTTTATGGGCGACAAAGGAACGTAA

Protein sequence

RWASSPHFIAGFYQDFNNVRSDGQAHSFQFSVTSTMASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIPLASTSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLGQVIATSPQLLLQRPQEFLQVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFLISIGVSKTHLPRAIRKYPELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT

Homology

[Close]

BLAST of Carg07054 vs. NCBI nr
Match: XP_023521598.1 (transcription termination factor MTERF2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521599.1 transcription termination factor MTERF2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023522938.1 transcription termination factor MTERF2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 857.8 bits (2215), Expect = 2.2e-245
Identity = 586/589 (99.49%), Postives = 587/589 (99.66%), Query Frame = 0


Query: 36  MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIPLAS 95
           MASVFFPIPTIHRSF+SSTPIPINRFSLSQPRSLLPLDSCPFRS FHFS TSSRFIPLAS
Sbjct: 1   MASVFFPIPTIHRSFESSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSPTSSRFIPLAS 60

Query: 96  TSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS 155
           TSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS
Sbjct: 61  TSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS 120

Query: 156 MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM 215
           MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM
Sbjct: 121 MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM 180

Query: 216 LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGG 275
           LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGG
Sbjct: 181 LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGG 240

Query: 276 LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF 335
           LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF
Sbjct: 241 LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF 300

Query: 336 GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITD 395
           GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITD
Sbjct: 301 GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITD 360

Query: 396 AIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           AIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 AIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 456 XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 515
           XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 516 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY 575
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY 540

Query: 576 PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT
Sbjct: 541 PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 589

[Close]

BLAST of Carg07054 vs. NCBI nr
Match: XP_022949554.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 853.6 bits (2204), Expect = 4.2e-244
Identity = 584/589 (99.15%), Postives = 585/589 (99.32%), Query Frame = 0


Query: 36  MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIPLAS 95
           MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRS FHFSSTSSRFIPLAS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 96  TSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS 155
           TSSDVPPDDSL+SLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS
Sbjct: 61  TSSDVPPDDSLNSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETS 120

Query: 156 MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM 215
           MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM
Sbjct: 121 MWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEM 180

Query: 216 LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGG 275
           LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTN SIPPDDDVQQTLSFFEKIEARRGG
Sbjct: 181 LPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNFSIPPDDDVQQTLSFFEKIEARRGG 240

Query: 276 LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF 335
           LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF
Sbjct: 241 LDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFF 300

Query: 336 GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITD 395
           GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQ NLKQIVSFFELEKVPNASITD
Sbjct: 301 GTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQCNLKQIVSFFELEKVPNASITD 360

Query: 396 AIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 455
           AIRSWPLILGSSASKLELMVDSFDELGVRSKK XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 AIRSWPLILGSSASKLELMVDSFDELGVRSKKLXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 456 XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 515
           XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 516 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY 575
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEY 540

Query: 576 PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT
Sbjct: 541 PRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 589

[Close]

BLAST of Carg07054 vs. NCBI nr
Match: XP_022998571.1 (transcription termination factor MTERF2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 828.2 bits (2138), Expect = 1.9e-236
Identity = 571/598 (95.48%), Postives = 574/598 (95.99%), Query Frame = 0


Query: 36  MASVFFP---IPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIP 95
           MASV FP   IPTIHRSF SSTPIPINRFSLSQPRSLL LDSCPFRS FHFSSTSSRFIP
Sbjct: 1   MASVVFPIPTIPTIHRSFASSTPIPINRFSLSQPRSLLSLDSCPFRSHFHFSSTSSRFIP 60

Query: 96  LAS------TSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVD 155
           LAS       SSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVD
Sbjct: 61  LASLSSDALPSSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVD 120

Query: 156 GVRELDETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMN 215
           GVRELDETSMWISWSSEGERPVGDGFGFKEKV LMAREKGDNGKVAFLESAGMNLSSAMN
Sbjct: 121 GVRELDETSMWISWSSEGERPVGDGFGFKEKVELMAREKGDNGKVAFLESAGMNLSSAMN 180

Query: 216 VARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFF 275
           VARYLSGEMLPSLIYKVKYMKELFFSGSGDGK IGKSARRMMTNLSIPPDDDVQQTLSFF
Sbjct: 181 VARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKSARRMMTNLSIPPDDDVQQTLSFF 240

Query: 276 EKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIF 335
           EKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIF
Sbjct: 241 EKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIF 300

Query: 336 LSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELE 395
           LSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELE
Sbjct: 301 LSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELE 360

Query: 396 KVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXX 455
           KVPNASITDAIRSWPLILGSSAS+LELMVDSFDELGVRSKK      XXXXXXXXXXXXX
Sbjct: 361 KVPNASITDAIRSWPLILGSSASRLELMVDSFDELGVRSKKLGQVIAXXXXXXXXXXXXX 420

Query: 456 XXXXXXXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXX 515
           XXXXXXXXXXXXXXXXXXXXXXXXXXX ATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXFATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXX 480

Query: 516 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVME 575
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVME
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVME 540

Query: 576 KPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           KPIKEVVEYPRYFSYSLEKKITPRFR+LKERNIECNL+DMLGKNDEEFAVMFM DKGT
Sbjct: 541 KPIKEVVEYPRYFSYSLEKKITPRFRMLKERNIECNLEDMLGKNDEEFAVMFMDDKGT 598

[Close]

BLAST of Carg07054 vs. NCBI nr
Match: XP_008457343.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo])

HSP 1 Score: 649.4 bits (1674), Expect = 1.2e-182
Identity = 447/600 (74.50%), Postives = 477/600 (79.50%), Query Frame = 0


Query: 34  STMAS--VFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFI 93
           +TMAS  +FFPIPTI+   KSS  IP++RF L Q      L+ CPF S FH   TSS F+
Sbjct: 2   ATMASFFLFFPIPTINACTKSSPLIPLHRFILPQ-----SLNFCPFPSRFHSLLTSSHFL 61

Query: 94  PLAST-------SSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKML 153
           PLAS        S D P +D L SL EA+LAVSEYLQR GVSE+ESVSIASNSPRFLKML
Sbjct: 62  PLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKML 121

Query: 154 VDGVRELDETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSA 213
           VD VRELDETSMW+SWS   ER   DGFGFKEKVALMA EKGD G+VAFLES GMNLSSA
Sbjct: 122 VDAVRELDETSMWVSWSK--ERGELDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLSSA 181

Query: 214 MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLS 273
           MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGK IGK+ARRMMTNLSIPPDDDVQQTLS
Sbjct: 182 MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQTLS 241

Query: 274 FFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRG 333
           FFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLS++SHVKPMVEFLE I IPKERMR 
Sbjct: 242 FFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERMRS 301

Query: 334 IFLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFE 393
           IFL FPP+IFF TEVLKSRIM FE+VG+     GKLL KYPWI SNCI GNLKQI+SFFE
Sbjct: 302 IFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISFFE 361

Query: 394 LEKVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXX 453
           LEKVPNASI +AI SWPLILGSS SKL+LMVD FD LGVRSKK                 
Sbjct: 362 LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLEPQ 421

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXX 513
                                         ATS+EKTL+RKXXXXXXXXXXXXXXXXXXX
Sbjct: 422 EFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKXXXXXXXXXXXXXXXXXXX 481

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNV 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN+
Sbjct: 482 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNI 541

Query: 574 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           MEKPIKEVV+YPRYFSYSLE KI PRF VLK  N+EC+LKDMLGKNDEEF+V F+  K T
Sbjct: 542 MEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYKRT 594

[Close]

BLAST of Carg07054 vs. NCBI nr
Match: XP_004145310.2 (PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus])

HSP 1 Score: 635.6 bits (1638), Expect = 1.8e-178
Identity = 488/599 (81.47%), Postives = 514/599 (85.81%), Query Frame = 0


Query: 35  TMAS--VFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIP 94
           TMAS  +FFP PTI  S KSS  IP++   L Q      L+ CPF S FH   TSS F+P
Sbjct: 3   TMASFFLFFPTPTITGSSKSSPLIPLHPSILPQ-----SLNFCPFPSRFHSLLTSSHFLP 62

Query: 95  LASTSSDV-------PPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLV 154
           LAS S D        P +D LHSL EA+LAVSEYLQR GV E+E+VSIASNSPRFLKMLV
Sbjct: 63  LASISPDALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLV 122

Query: 155 DGVRELDETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAM 214
           D VRELDETSMW SWS   ER   DGFGFKEKVA MA EKGD GKVAFLES GMNLSSAM
Sbjct: 123 DAVRELDETSMWDSWSK--ERGELDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAM 182

Query: 215 NVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSF 274
           NVARYLSGEMLPSLIYKVKYMK LFFSGSGDG  IGK+ARRMMTNLSIPPDDDVQQTLSF
Sbjct: 183 NVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSF 242

Query: 275 FEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGI 334
           FEKIEARRGGLDMLSSNEESF LLLESFPRMLLLS++SHVKPMVEFLE IGIPKERMR I
Sbjct: 243 FEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERMRSI 302

Query: 335 FLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFEL 394
           FL FPP+IFF TEVLKSRIM FE+VG+    FGKLL KYPWITSNCI GNLKQIVSFFE 
Sbjct: 303 FLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSFFES 362

Query: 395 EKVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXX 454
           EKVP+ASI +AI SWPLILGSS SKLELMVD  D LGVRSKK  XXXXXXXXXXXXXXXX
Sbjct: 363 EKVPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGXXXXXXXXXXXXXXXX 422

Query: 455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXX 514
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX ATSVEKTL+RKXXXXXXXXXXXXXXXXXXXX
Sbjct: 423 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSATSVEKTLKRKXXXXXXXXXXXXXXXXXXXX 482

Query: 515 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVM 574
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN+M
Sbjct: 483 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNIM 542

Query: 575 EKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           +KP KEVV+YPRYFSYSLE KI PRFR LK  N+EC+LKDMLGKNDEEF+V F+G+K T
Sbjct: 543 KKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNKRT 594

[Close]

BLAST of Carg07054 vs. TAIR10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-79
Identity = 327/572 (57.17%), Postives = 384/572 (67.13%), Query Frame = 0


Query: 70  LPLDSCPFRSCFHFSSTSSRFIPLAST------------SSDVPPDDSLHSL------EE 129
           L L S P +SC +FSS+S  F P   T            S+ +   DS  S       +E
Sbjct: 13  LTLISPPLKSC-NFSSSSLFFSPRRVTLFPAYHSGRVTVSASLQHGDSNFSSNSSQTNQE 72

Query: 130 ARLAVSEYLQR-LGVSEEESVSIASNSPRFLKMLVDGVRELDETSMWISWSSEGE-RPVG 189
           A+ +++ +L+R  G+SE +S  I+SN P++ +M+V+GVR+L+E   W SW   GE   V 
Sbjct: 73  AQNSIAGFLRRDTGLSEADSDFISSNCPKYTRMIVEGVRDLEE---WNSWKGSGESERVE 132

Query: 190 DGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEMLPSLIYKVKYMKEL 249
           +G GFKEKV  M ++KGD GKVAFLES G++LSSAM +A Y+S E LP L+ KVKY+KE+
Sbjct: 133 EGLGFKEKVIYMVKQKGDGGKVAFLESLGLSLSSAMYLAHYVSSESLPILLDKVKYLKEI 192

Query: 250 FFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLL 309
           FFSGS +   +GK ARRMM  LSIP D+DVQQTLSFFEKIEARRGGLDML S + SFR L
Sbjct: 193 FFSGSDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGLDMLGSVDASFRFL 252

Query: 310 LESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGI-FLSFPPIIFFGTEVLKSRIMTFE 369
           LESFPR+LLLS ++ +KPMVEFLE+IGIPK  +  +                        
Sbjct: 253 LESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVXXXXXXXXXXXXXXXXXXXXXXXX 312

Query: 370 KVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITDAIRSWPLILGSSA 429
                                                                      A
Sbjct: 313 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 372

Query: 430 SKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 489
           S +E+MV  FD+LGVR K+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 373 SNMEMMVKEFDKLGVRDKRMGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 432

Query: 490 XXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 549
           XXXXXX   +EKTL++K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 433 XXXXXXXXXIEKTLQKKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 492

Query: 550 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEYPRYFSYSLEKKIT 609
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N MEKP++EV+EYPRYFSYSLEK+I 
Sbjct: 493 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSMEKPVREVIEYPRYFSYSLEKRIK 552

Query: 610 PRFRVLKERNIECNLKDMLGKNDEEFAVMFMG 621
           PRFRVLK RNIEC L++MLGKNDEEFA  F+G
Sbjct: 553 PRFRVLKGRNIECTLQEMLGKNDEEFAADFLG 580

[Close]

BLAST of Carg07054 vs. TAIR10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-07
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGD 622
           M +P+KE+VEYP YF+YSLE +I PR++ L+ + I  +L   L  +D+ F     G+
Sbjct: 406 MGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQGN 462

[Close]

BLAST of Carg07054 vs. TAIR10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-07
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 562 VNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMF 619
           V VM + + EV  YP +F + L+KK+  RF+++K+ NI+C+L++ML  N ++F   F
Sbjct: 268 VQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Carg07054 vs. TAIR10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-07
Identity = 22/50 (44.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEF 615
           M +P+++++E+PR+FSYSLE++I PR  ++ E  +   L+ ML   DEEF
Sbjct: 543 MIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of Carg07054 vs. TAIR10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 50.4 bits (119), Expect = 4.5e-06
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEF 615
           M   +KE+  +P+YFS+SLE+KI PR R+LKE  I   L +ML  +D +F
Sbjct: 219 MRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268

[Close]

BLAST of Carg07054 vs. Swiss-Prot
Match: sp|Q9SZL6|MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-06
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 562 VNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMF 619
           V VM + + EV  YP +F + L+KK+  RF+++K+ NI+C+L++ML  N ++F   F
Sbjct: 268 VQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Carg07054 vs. Swiss-Prot
Match: sp|F4IHL3|MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.4e-06
Identity = 22/50 (44.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEF 615
           M +P+++++E+PR+FSYSLE++I PR  ++ E  +   L+ ML   DEEF
Sbjct: 543 MIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of Carg07054 vs. Swiss-Prot
Match: sp|Q84X53|MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 8.1e-05
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEF 615
           M   +KE+  +P+YFS+SLE+KI PR R+LKE  I   L +ML  +D +F
Sbjct: 220 MRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269

[Close]

BLAST of Carg07054 vs. Swiss-Prot
Match: sp|Q9ZT96|MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-04
Identity = 18/50 (36.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 565 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEF 615
           M++P++++V++P +F+Y LE  + PR + + ++ I+C+L  ML  +DE+F
Sbjct: 441 MKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKF 490

[Close]

BLAST of Carg07054 vs. TrEMBL
Match: tr|A0A1S3C6K3|A0A1S3C6K3_CUCME (transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497057 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 8.0e-183
Identity = 447/600 (74.50%), Postives = 477/600 (79.50%), Query Frame = 0


Query: 34  STMAS--VFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFI 93
           +TMAS  +FFPIPTI+   KSS  IP++RF L Q      L+ CPF S FH   TSS F+
Sbjct: 2   ATMASFFLFFPIPTINACTKSSPLIPLHRFILPQ-----SLNFCPFPSRFHSLLTSSHFL 61

Query: 94  PLAST-------SSDVPPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKML 153
           PLAS        S D P +D L SL EA+LAVSEYLQR GVSE+ESVSIASNSPRFLKML
Sbjct: 62  PLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKML 121

Query: 154 VDGVRELDETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSA 213
           VD VRELDETSMW+SWS   ER   DGFGFKEKVALMA EKGD G+VAFLES GMNLSSA
Sbjct: 122 VDAVRELDETSMWVSWSK--ERGELDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLSSA 181

Query: 214 MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLS 273
           MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGK IGK+ARRMMTNLSIPPDDDVQQTLS
Sbjct: 182 MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQTLS 241

Query: 274 FFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRG 333
           FFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLS++SHVKPMVEFLE I IPKERMR 
Sbjct: 242 FFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERMRS 301

Query: 334 IFLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFE 393
           IFL FPP+IFF TEVLKSRIM FE+VG+     GKLL KYPWI SNCI GNLKQI+SFFE
Sbjct: 302 IFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISFFE 361

Query: 394 LEKVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXX 453
           LEKVPNASI +AI SWPLILGSS SKL+LMVD FD LGVRSKK                 
Sbjct: 362 LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLEPQ 421

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXX 513
                                         ATS+EKTL+RKXXXXXXXXXXXXXXXXXXX
Sbjct: 422 EFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKXXXXXXXXXXXXXXXXXXX 481

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNV 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN+
Sbjct: 482 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNI 541

Query: 574 MEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           MEKPIKEVV+YPRYFSYSLE KI PRF VLK  N+EC+LKDMLGKNDEEF+V F+  K T
Sbjct: 542 MEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYKRT 594

[Close]

BLAST of Carg07054 vs. TrEMBL
Match: tr|A0A0A0LV84|A0A0A0LV84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 4.6e-178
Identity = 484/593 (81.62%), Postives = 510/593 (86.00%), Query Frame = 0


Query: 39  VFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIPLASTSS 98
           +FFP PTI  S KSS  IP++   L Q      L+ CPF S FH   TSS F+PLAS S 
Sbjct: 6   LFFPTPTITGSSKSSPLIPLHPSILPQ-----SLNFCPFPSRFHSLLTSSHFLPLASISP 65

Query: 99  DV-------PPDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVREL 158
           D        P +D LHSL EA+LAVSEYLQR GV E+E+VSIASNSPRFLKMLVD VREL
Sbjct: 66  DALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLVDAVREL 125

Query: 159 DETSMWISWSSEGERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYL 218
           DETSMW SWS   ER   DGFGFKEKVA MA EKGD GKVAFLES GMNLSSAMNVARYL
Sbjct: 126 DETSMWDSWSK--ERGELDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAMNVARYL 185

Query: 219 SGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEA 278
           SGEMLPSLIYKVKYMK LFFSGSGDG  IGK+ARRMMTNLSIPPDDDVQQTLSFFEKIEA
Sbjct: 186 SGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSFFEKIEA 245

Query: 279 RRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPP 338
           RRGGLDMLSSNEESF LLLESFPRMLLLS++SHVKPMVEFLE IGIPKERMR IFL FPP
Sbjct: 246 RRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERMRSIFLLFPP 305

Query: 339 IIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNA 398
           +IFF TEVLKSRIM FE+VG+    FGKLL KYPWITSNCI GNLKQIVSFFE EKVP+A
Sbjct: 306 VIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSFFESEKVPSA 365

Query: 399 SITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXX 458
           SI +AI SWPLILGSS SKLELMVD  D LGVRSKK  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 366 SIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGXXXXXXXXXXXXXXXXXXXXXX 425

Query: 459 XXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXX 518
           XXXXXXXXXXXXXXXXXXXXXX ATSVEKTL+RKXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 426 XXXXXXXXXXXXXXXXXXXXXXSATSVEKTLKRKXXXXXXXXXXXXXXXXXXXXXXXXXX 485

Query: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKE 578
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN+M+KP KE
Sbjct: 486 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNIMKKPKKE 545

Query: 579 VVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 625
           VV+YPRYFSYSLE KI PRFR LK  N+EC+LKDMLGKNDEEF+V F+G+K T
Sbjct: 546 VVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNKRT 591

[Close]

BLAST of Carg07054 vs. TrEMBL
Match: tr|A0A2N9IZM6|A0A2N9IZM6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58234 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.1e-126
Identity = 347/572 (60.66%), Postives = 412/572 (72.03%), Query Frame = 0


Query: 52  SSTPIPINRFSLSQPRSLLPLDSCPFRSCFHFSSTSSRFIPLASTSSDVPPDDSLHSLEE 111
           SS  IP    SL  P+ L PL   P                LAS  ++  P  +  S +E
Sbjct: 29  SSHKIPFKSHSLLLPK-LKPLHFHPL---------------LASPPTNPAPLPNDQSSQE 88

Query: 112 ARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETSMWISWSSEGERPV--- 171
           A+ A+SE+LQ  GVSE +S SI+SNSPR+L MLVDGVR+LDE S+W S  SEG   V   
Sbjct: 89  AQEAISEFLQGFGVSEADSDSISSNSPRYLAMLVDGVRDLDELSLWGSCGSEGNEFVAAA 148

Query: 172 GDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEMLPSLIYKVKYMKE 231
           GD  GFK+KV  MA+EKGDNGKVAFLES G++LS+AMNVARYLS E LP+L+ KVK MKE
Sbjct: 149 GDVVGFKKKVLYMAKEKGDNGKVAFLESVGLSLSAAMNVARYLSAETLPALVLKVKCMKE 208

Query: 232 LFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRL 291
           LFFSGS DG  IGK+ARRMM +LSIP D+++Q TLSFFEKIEARRGGL++L SN+ SFR 
Sbjct: 209 LFFSGSNDGGLIGKNARRMMMHLSIPIDEELQLTLSFFEKIEARRGGLNLLGSNDASFRY 268

Query: 292 LLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFFGTEVLKSRIMTFE 351
           L+ESFPR+LLLS++SH+KPMVEFLE IG+P+  +  + L FPPIIF+  E +K R++ F+
Sbjct: 269 LIESFPRLLLLSVESHMKPMVEFLENIGVPRGCLINLILLFPPIIFYNIEGIKQRVLAFK 328

Query: 352 KVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITDAIRSWPLILGSSA 411
           +V +V+ + GKLL KYPWI S+ I+ N K++VSFF  EKVP  S+  AI+SWP ILG S 
Sbjct: 329 EVAVVDKDIGKLLLKYPWILSSSIRENYKEVVSFFNSEKVPILSVHRAIKSWPHILGCST 388

Query: 412 SKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
           SKL+LMV+ FDELGVR++K                                         
Sbjct: 389 SKLKLMVEQFDELGVRNRKLGQVIAKSPQLLLRKPQELFHVIAFLEDLGIDKETIRRIIC 448

Query: 472 XXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 531
                 ATS+EKTL+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 449 RCPEIFATSIEKTLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 508

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEYPRYFSYSLEKKIT 591
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N MEKPI +VV+YPRYFSYSLEKKI 
Sbjct: 509 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTMEKPITDVVDYPRYFSYSLEKKIK 568

Query: 592 PRFRVLKERNIECNLKDMLGKNDEEFAVMFMG 621
           PRF VLK RN+E +L DMLGK+DE+FA  +MG
Sbjct: 569 PRFWVLKGRNVEFSLNDMLGKSDEDFAAQYMG 584

[Close]

BLAST of Carg07054 vs. TrEMBL
Match: tr|A0A2P4MUV2|A0A2P4MUV2_QUESU (Transcription termination factor mterf2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_33054 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 2.0e-125
Identity = 376/538 (69.89%), Postives = 441/538 (81.97%), Query Frame = 0


Query: 89  RFIPLASTSSDVP---PDDSLHSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLV 148
           RF PL ++    P   P+D      EA+ A+SE+LQ  GVS+ +S SI+SNSPR+LKMLV
Sbjct: 50  RFHPLLASPPSNPAPLPNDQSWQTHEAQQAISEFLQGFGVSQADSDSISSNSPRYLKMLV 109

Query: 149 DGVRELDETSMWISWSSEGE--RPVGDG-FGFKEKVALMAREKGDNGKVAFLESAGMNLS 208
           DGVR+LDE S+W S   EG+     GD   GFK+KV  MA+EKGDNGKVAFLES G++LS
Sbjct: 110 DGVRDLDELSLWGSCGDEGKDFAVAGDAVVGFKKKVLYMAKEKGDNGKVAFLESVGLSLS 169

Query: 209 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNLSIPPDDDVQQT 268
           +AMNVARYLS E LP+L++KVK MKEL FSG+ DG  IGK+ARRMM  LSI  D+++QQT
Sbjct: 170 AAMNVARYLSSESLPALVHKVKCMKELLFSGNNDGGHIGKNARRMMMYLSISIDEELQQT 229

Query: 269 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERM 328
           LSFFEKI+ARRGGLDML SN++SFR L+ESFPR+LLLS++SH+KPMVEFLE IG+P+ R+
Sbjct: 230 LSFFEKIQARRGGLDMLGSNDDSFRYLIESFPRLLLLSVESHMKPMVEFLENIGVPRGRL 289

Query: 329 RGIFLSFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQGNLKQIVSF 388
             + L FPPIIF+  E++K R+  F++V +V+ + GKLL KYPWI S  I+ N K+++ F
Sbjct: 290 INLILLFPPIIFYNIELIKLRVQAFKEVAVVDKDMGKLLLKYPWILSTSIRENYKEVLYF 349

Query: 389 FELEKVPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKXXXXXXXXXXXXXXX 448
           F LEKVP  S+  AI+SWP ILG S SKL+LMV+ FD+LGVR+KK     XXXXXXXXXX
Sbjct: 350 FNLEKVPILSVHRAIKSWPHILGCSTSKLKLMVEHFDKLGVRNKKLGQVIXXXXXXXXXX 409

Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSVEKTLRRKXXXXXXXXXXXXXXXXX 508
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATS+EKT    XXXXXXXXXXXXXXXXX
Sbjct: 410 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFATSIEKTXXXXXXXXXXXXXXXXXXXXX 469

Query: 509 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 568
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 470 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 529

Query: 569 NVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMG 621
           N MEKPI +VV+YPRYFSYSLEKKI PRF VLK RN+EC+LKDMLGKND++FA  +MG
Sbjct: 530 NTMEKPITDVVDYPRYFSYSLEKKIKPRFWVLKGRNVECSLKDMLGKNDDDFAADYMG 587

[Close]

BLAST of Carg07054 vs. TrEMBL
Match: tr|A0A2I4H279|A0A2I4H279_9ROSI (transcription termination factor MTERF2, chloroplastic OS=Juglans regia OX=51240 GN=LOC109012864 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.6e-122
Identity = 361/503 (71.77%), Postives = 416/503 (82.70%), Query Frame = 0


Query: 117 SEYLQRLGVSEEESVSIASNSPRFLKMLVDGVRELDETSMWISWSSEGERPVGDGFGFKE 176
           SE+LQ+ GVS  +S  I+SNSPR+L MLVDGV+ELDE S+W SW SEG+  V    GFK+
Sbjct: 91  SEFLQQFGVSAADSDLISSNSPRYLAMLVDGVKELDELSLWDSWKSEGKESVAGDVGFKK 150

Query: 177 KVALMAREKGDNGKVAFLESAGMNLSSAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGD 236
           KV  MA+EKGDNGKVAFLES G++LSSAMNVARYLS E LP LI++VK MKE+ F GS D
Sbjct: 151 KVFYMAKEKGDNGKVAFLESVGLSLSSAMNVARYLSAETLPCLIHRVKCMKEMLFCGSND 210

Query: 237 GKFIGKSARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLESFPRM 296
           G  IGK+ARRMM  LSI  D++VQQTLSFFEKI ARRGGL+ L SN  SF+ L+ESFPR+
Sbjct: 211 GGLIGKNARRMMMFLSITIDEEVQQTLSFFEKIAARRGGLETLGSNNASFQYLIESFPRL 270

Query: 297 LLLSIQSHVKPMVEFLEAIGIPKERMRGIFLSFPPIIFFGTEVLKSRIMTFEKVGIVEME 356
           LLLS++SH+KPMVEFLE IG+P+ERM  + L FPPIIF   EV+K R++ F++V  ++ +
Sbjct: 271 LLLSVESHMKPMVEFLENIGVPRERMINVILLFPPIIFCNIEVIKRRVLAFKEVAAMDKD 330

Query: 357 FGKLLPKYPWITSNCIQGNLKQIVSFFELEKVPNASITDAIRSWPLILGSSASKLELMVD 416
            GK+L KYPWI S  IQ N K ++SFF LEKVP  S+  AI+SWP +LG S SKL+LMV+
Sbjct: 331 VGKVLVKYPWILSTSIQDNYKVVLSFFNLEKVPTVSVHRAIKSWPHLLGCSTSKLKLMVE 390

Query: 417 SFDELGVRSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT 476
            F+ELGVR+KK       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AT
Sbjct: 391 QFEELGVRNKKLGLVIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAT 450

Query: 477 SVEKTLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 536
           S+EKT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 451 SIEKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 510

Query: 537 XXXXXXXXXXXXXXXXXXXXXXXXXVNVMEKPIKEVVEYPRYFSYSLEKKITPRFRVLKE 596
           XXXXXXXXXXXXXXXXXXXXXXXXX N ME+PI +VV+YPRYFSYSLEKKI PRF VL+ 
Sbjct: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXNTMERPITDVVDYPRYFSYSLEKKIKPRFWVLRG 570

Query: 597 RNIECNLKDMLGKNDEEFAVMFM 620
           RN+EC+L DMLGKNDEEFAV ++
Sbjct: 571 RNVECSLMDMLGKNDEEFAVEYL 593

The following BLAST results are available for this feature:

BLAST of Carg07054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521598.1	2.2e-245	99.49	transcription termination factor MTERF2, chloroplastic-like isoform X1 [Cucurbit...	[more]
XP_022949554.1	4.2e-244	99.15	transcription termination factor MTERF2, chloroplastic [Cucurbita moschata]	[more]
XP_022998571.1	1.9e-236	95.48	transcription termination factor MTERF2, chloroplastic [Cucurbita maxima]	[more]
XP_008457343.1	1.2e-182	74.50	PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo]	[more]
XP_004145310.2	1.8e-178	81.47	PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus]	[more]

BLAST of Carg07054 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78930.1	1.8e-79	57.17	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	3.1e-07	42.11	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	3.1e-07	40.35	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	4.1e-07	44.00	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	4.5e-06	48.00	Mitochondrial transcription termination factor family protein	[more]

BLAST of Carg07054 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZL6\|MTEF6_ARATH	5.6e-06	40.35	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
sp\|F4IHL3\|MTEF2_ARATH	7.4e-06	44.00	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
sp\|Q84X53\|MTEF1_ARATH	8.1e-05	48.00	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
sp\|Q9ZT96\|MTEF4_ARATH	4.0e-04	36.00	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Carg07054 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6K3\|A0A1S3C6K3_CUCME	8.0e-183	74.50	transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0LV84\|A0A0A0LV84_CUCSA	4.6e-178	81.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=4 SV=1	[more]
tr\|A0A2N9IZM6\|A0A2N9IZM6_FAGSY	3.1e-126	60.66	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58234 PE=4 SV=1	[more]
tr\|A0A2P4MUV2\|A0A2P4MUV2_QUESU	2.0e-125	69.89	Transcription termination factor mterf2, chloroplastic OS=Quercus suber OX=58331...	[more]
tr\|A0A2I4H279\|A0A2I4H279_9ROSI	4.6e-122	71.77	transcription termination factor MTERF2, chloroplastic OS=Juglans regia OX=51240...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07054-RA	Carg07054-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 500..531 e-value: 0.11 score: 21.6 coord: 569..600 e-value: 1.4E-5 score: 34.6 coord: 323..353 e-value: 84.0 score: 12.0 coord: 464..495 e-value: 3.7E-7 score: 39.8 coord: 394..424 e-value: 5.1 score: 16.1 coord: 429..459 e-value: 1.2 score: 18.2 coord: 287..318 e-value: 0.0061 score: 25.8 coord: 536..568 e-value: 0.016 score: 24.3 coord: 358..389 e-value: 2500.0 score: 0.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 118..344 e-value: 2.2E-8 score: 33.3 coord: 310..615 e-value: 4.6E-93 score: 311.5
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 420..619 e-value: 3.9E-40 score: 139.7 coord: 174..345 e-value: 3.1E-7 score: 31.8
None	No IPR available	PANTHER	PTHR13068:SF42	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 102..620
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 102..620

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07054	Cla008145	Watermelon (97103) v1	carwmB0515
Carg07054	Csa1G532380	Cucumber (Chinese Long) v2	carcuB0550
Carg07054	MELO3C020528	Melon (DHL92) v3.5.1	carmeB0522
Carg07054	ClCG03G000530	Watermelon (Charleston Gray)	carwcgB0504
Carg07054	CSPI01G24100	Wild cucumber (PI 183967)	carcpiB0557
Carg07054	Cucsa.151720	Cucumber (Gy14) v1	carcgyB0602
Carg07054	CmaCh01G006880	Cucurbita maxima (Rimu)	carcmaB0731
Carg07054	CmoCh01G007150	Cucurbita moschata (Rifu)	carcmoB0708
Carg07054	Lsi02G012590	Bottle gourd (USVL1VR-Ls)	carlsiB472
Carg07054	Cp4.1LG02g12050	Cucurbita pepo (Zucchini)	carcpeB0739
Carg07054	CsGy1G023590	Cucumber (Gy14) v2	carcgybB0525
Carg07054	MELO3C020528.2	Melon (DHL92) v3.6.1	carmedB0528
Carg07054	CsaV3_1G036410	Cucumber (Chinese Long) v3	carcucB0556
Carg07054	Cla97C03G051310	Watermelon (97103) v2	carwmbB0545
Carg07054	Bhi08G000399	Wax gourd	carwgoB0630

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07054	Silver-seed gourd	carcarB497
Carg07054	Cucurbita maxima (Rimu)	carcmaB0728
Carg07054	Cucurbita moschata (Rifu)	carcmoB0705
Carg07054	Cucurbita pepo (Zucchini)	carcpeB0737
Carg07054	Watermelon (97103) v2	carwmbB0544