Carg06964 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATTTCGAAGCTACGGACGGATGTGGGGTGGATGAGATCCCATTTTCGGCTGCATCCGCATCTCCCAACAACCGCAACCATTGAAGCCCTGTGATCCGATTCGTTCTCTTCCTGCAAATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTCTTATTCCTTCTCTTCCCTAATTCCTTCTACTCGGGCATTTTTGTTGTTTTGCTTGATTAAGATGCCGGGCTCCGGCTGTTGGATTTGGGAATACCTGGAACAAACCCTCCCCATCCCTATTTCATTTTTGCTGCTGATATCATCACTACCCTGCTGTTCGAGATGTTTCCGATTTTTACCGGGTTTTCTTTTTCTCTTTCTTATCTGTAGTTTCGTGTTATGCTAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGGTTTTATTCGATTTGATACTTCGTGGAGTAAAGATTTATCAATGGAATGTTAGGAGTCTTCAAACGATTTGTTGTTGTAAGTTATGATGTGCTTTTGTTCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGGTATAGGCCTTGCACTCCCAATGGGCAATAGCTTGCAGTTTTTCTTAGTGTGTTTAACCATCTGCCCAATTCTATCCATCCACCCATAACATTTGGTATTTTGGCATACAACTACTACAATATGCAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGTATTGCCAATATGTCCTACAACTGCCACTACATTAGTAGAATTGAGATTTTCATTTTTTTCTCTGTTAATTTGAACCTTGAACGGCTAACTCGGTCAGAGTGGATGTTAGTCTTGAGTATACCTTTTATTTTGTCAAGTGTTCGCATTCTTTTTGAAAGGTTTATGAGTGGTTATGAGTATTCGTATGGCTGGACTGGGTGTGAATATTTTGTGGCTGCTAGTTACTAAGATGACGTTGGATGCTTTTTAGTTGTGTTTAAGCATTCTATTATTGAGTTTGAGGAGTTATTCTCTTTTGTTTGAATTGGTACGTTTACACAATTTTTTGGCTGGATTTTGGTTCTTTATTTGTTACTGTTGGGTGATTTATGGCTGGTTGAGTAATGTTTATTATTTATGTATATCGTTTGAGGAGGCATTGTTTTAACCACTCATCAAGTTTTAGAGTTTGAATTGGACGGAATAAAAAATTGAAGGCAAAGATTGACATAAGTTAAGGAAAAAAATCAGTCCCTTTGGGGGATTGGGATTCATAATAAAACATAAGGTTATATTAGAACTTCGAGGAGCGCATTGAACAGCCCAACTGTTTCTGGTCTCAAATTTTCTGTTTTGGAGGAGCGAGGTACTTAAAATATTAGATTTTTGACATTTGATGTGGGAAAATCTAAAACTGGGGCACGGGTTCTGGGGTCATATCTATTATTTATGGAGTGGGTGTCTGTTTGTGTGCGCGAGTGGTGACAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTATGGGTATAGGCATGGGCATGGGCTAAGTTTGAGCTTAAGTTTTGAGTAAGGATTGATTCGTATTTATTTTCTGTTTGTCCTATAAATAAGCAGATCCCATCAGCATTTCTGAACGTTTCTTTTTTGTGTTTTGAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGTGCTCATTCTCCTCTCTTAAATTTGGATTTGGAAGGTACCCCACATTGAGATTTAGATATTGCCTTGCAAATCCGAACTGAAACCTTCTAGTTTACTGGTGTTTATAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGGTAACAACTTGGGGTTTTATAATTTTGGAAATATATTCTGCAGTTTCATGTCGTTTTACAATCTCTCTCTGCTCCGTACAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGGTATGCATGCTTTGCTTCATTCGTTTTTCTTTCTCTCTGTAAGAGAAAGTTTGTGCTAAAAACAGGCATTGTTGTTCATTTTGCGACAGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGAAGTAAATGTGTATCCAACAAACAATGATATGTTAAACCCAATATTTGGTATTGAACTTGATGTGATATGCAGACATACAGCTACTGGGTTCACATTAAAGAAAAGGTAAGGCAAGGAAAGAAGTTACAGAAAAGCAGCAATGCTGTCGCTCTCTCTGCTACCAACAATCCCACACTTTATGAGGCTCCCAATGGTGTTCCACATCAACTTTGCATCTTCCACTCTGTTTCCCTCTGCCAATTTCTTGTATAGATAGCTTTCGAAAGTCATTCTCTGCACATACTCGTTCCCACACATCTCCACCAATGCTTCCCTTCCGGCGTTGTCTCCATAGAACACTCTCTGCAACAGATCCAAGAACCTGAACGTCCCCACGTACTTGGCGTCCCACTCTCTCAGGTACTCTCTCTTCAGATCCCTTTCTCCGATCATCCTCTCCCCTCCTTCCGATGCTCGCACCACTGCCTCCCCGCACATTCTCCCGGATTTTGCAGCGAAATATATGCCTTCCCCGGAGCACTTCGTTACGTACCCTGCCGCGTCCCCGACCAGTGCCACCCGCCCTATCACTCGCCTAGCTCGCGGGTGCTCCGGTATTGGATGTGCCTCTACTTTAATCACCTTCCCTCCACTTATCTTAC ATATATTTCGAAGCTACGGACGGATGTGGGGTGGATGAGATCCCATTTTCGGCTGCATCCGCATCTCCCAACAACCGCAACCATTGAAGCCCTGTGATCCGATTCGTTCTCTTCCTGCAAATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGAAGTAAATGTGTATCCAACAAACAATGATATGTTAAACCCAATATTTGGTATTGAACTTGATGTGATATGCAGACATACAGCTACTGGGTTCACATTAAAGAAAAGGTAAGGCAAGGAAAGAAGTTACAGAAAAGCAGCAATGCTGTCGCTCTCTCTGCTACCAACAATCCCACACTTTATGAGGCTCCCAATGGTGTTCCACATCAACTTTGCATCTTCCACTCTGTTTCCCTCTGCCAATTTCTTGTATAGATAGCTTTCGAAAGTCATTCTCTGCACATACTCGTTCCCACACATCTCCACCAATGCTTCCCTTCCGGCGTTGTCTCCATAGAACACTCTCTGCAACAGATCCAAGAACCTGAACGTCCCCACGTACTTGGCGTCCCACTCTCTCAGGTACTCTCTCTTCAGATCCCTTTCTCCGATCATCCTCTCCCCTCCTTCCGATGCTCGCACCACTGCCTCCCCGCACATTCTCCCGGATTTTGCAGCGAAATATATGCCTTCCCCGGAGCACTTCGTTACGTACCCTGCCGCGTCCCCGACCAGTGCCACCCGCCCTATCACTCGCCTAGCTCGCGGGTGCTCCGGTATTGGATGTGCCTCTACTTTAATCACCTTCCCTCCACTTATCTTAC ATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTTGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTCAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCGATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGTGTCTAGGTTCCCCTCCCGCTTTTCTGTCTACTATGTGCTCGATCAGCCTCCTGAAGGATGGGATGGCGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCAAATGTTCGGGTGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAATCCAACCAACCCCATTATTTACTCTCCTCTTTGCCGATCTAATTCAATCTTCCCATCCCCATCCCAAAAGCAATTGA MATSFVHSHRPEFLTVAVAAVAIGVATAYYFYITKKSKPQGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHMSCRGKDSEGEEVVKPYTPTSLDTDVGYFDLVIKMYPQGRMSHHFREMREGDFLAVKGPKGRFKYEANEVEAFGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANATYEDILLKEELDSLVSRFPSRFSVYYVLDQPPEGWDGGVGFVTEEMIRLHCPGPSPNVRVDIEVRTTPHEQSYGCLPQNYWLYFPNAVPVLIQPTPLFTLLFADLIQSSHPHPKSN
BLAST of Carg06964 vs. NCBI nr
Match: XP_022944291.1 (NADH--cytochrome b5 reductase 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 617.1 bits (1590), Expect = 3.3e-173 Identity = 297/306 (97.06%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022985759.1 (NADH--cytochrome b5 reductase 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 611.7 bits (1576), Expect = 1.4e-171 Identity = 294/306 (96.08%), Postives = 296/306 (96.73%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022944292.1 (NADH--cytochrome b5 reductase 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 562.4 bits (1448), Expect = 9.6e-157 Identity = 276/306 (90.20%), Postives = 278/306 (90.85%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022985760.1 (NADH--cytochrome b5 reductase 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 557.0 bits (1434), Expect = 4.1e-155 Identity = 273/306 (89.22%), Postives = 275/306 (89.87%), Query Frame = 0
BLAST of Carg06964 vs. NCBI nr
Match: XP_022944293.1 (NADH--cytochrome b5 reductase 1-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 521.2 bits (1341), Expect = 2.5e-144 Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Carg06964 vs. TAIR10
Match: AT5G17770.1 (NADH:cytochrome B5 reductase 1) HSP 1 Score: 369.8 bits (948), Expect = 1.7e-102 Identity = 174/254 (68.50%), Postives = 208/254 (81.89%), Query Frame = 0
BLAST of Carg06964 vs. TAIR10
Match: AT5G20080.1 (FAD/NAD(P)-binding oxidoreductase) HSP 1 Score: 196.4 bits (498), Expect = 2.5e-50 Identity = 105/258 (40.70%), Postives = 160/258 (62.02%), Query Frame = 0
BLAST of Carg06964 vs. TAIR10
Match: AT1G37130.1 (nitrate reductase 2) HSP 1 Score: 168.7 bits (426), Expect = 5.6e-42 Identity = 86/213 (40.38%), Postives = 131/213 (61.50%), Query Frame = 0
BLAST of Carg06964 vs. TAIR10
Match: AT1G77760.1 (nitrate reductase 1) HSP 1 Score: 162.2 bits (409), Expect = 5.3e-40 Identity = 80/213 (37.56%), Postives = 128/213 (60.09%), Query Frame = 0
BLAST of Carg06964 vs. Swiss-Prot
Match: sp|Q9ZNT1|NB5R1_ARATH (NADH--cytochrome b5 reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CBR1 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.0e-101 Identity = 174/254 (68.50%), Postives = 208/254 (81.89%), Query Frame = 0
BLAST of Carg06964 vs. Swiss-Prot
Match: sp|Q6BUX2|NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CBR1 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.5e-63 Identity = 118/237 (49.79%), Postives = 159/237 (67.09%), Query Frame = 0
BLAST of Carg06964 vs. Swiss-Prot
Match: sp|Q6CA86|NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=CBR1 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.7e-62 Identity = 119/244 (48.77%), Postives = 164/244 (67.21%), Query Frame = 0
BLAST of Carg06964 vs. Swiss-Prot
Match: sp|A1C7E9|NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=cbr1 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 8.0e-62 Identity = 123/250 (49.20%), Postives = 162/250 (64.80%), Query Frame = 0
BLAST of Carg06964 vs. Swiss-Prot
Match: sp|Q59P03|NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CBR1 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.8e-61 Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 0
BLAST of Carg06964 vs. TrEMBL
Match: tr|A0A0A0KZ12|A0A0A0KZ12_CUCSA (NADH-cytochrome b5 reductase OS=Cucumis sativus OX=3659 GN=Csa_4G269170 PE=3 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 9.0e-127 Identity = 217/246 (88.21%), Postives = 231/246 (93.90%), Query Frame = 0
BLAST of Carg06964 vs. TrEMBL
Match: tr|A0A067L6P9|A0A067L6P9_JATCU (NADH-cytochrome b5 reductase OS=Jatropha curcas OX=180498 GN=JCGZ_23855 PE=3 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 4.9e-117 Identity = 196/248 (79.03%), Postives = 224/248 (90.32%), Query Frame = 0
BLAST of Carg06964 vs. TrEMBL
Match: tr|A0A1S3BN07|A0A1S3BN07_CUCME (NADH-cytochrome b5 reductase OS=Cucumis melo OX=3656 GN=LOC103491618 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 6.0e-115 Identity = 205/253 (81.03%), Postives = 215/253 (84.98%), Query Frame = 0
BLAST of Carg06964 vs. TrEMBL
Match: tr|A0A1R3HLC1|A0A1R3HLC1_COCAP (NADH-cytochrome b5 reductase OS=Corchorus capsularis OX=210143 GN=CCACVL1_18403 PE=3 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 1.8e-114 Identity = 192/246 (78.05%), Postives = 223/246 (90.65%), Query Frame = 0
BLAST of Carg06964 vs. TrEMBL
Match: tr|A0A2P2KF17|A0A2P2KF17_RHIMU (NADH-cytochrome b5 reductase OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 3.9e-114 Identity = 194/275 (70.55%), Postives = 233/275 (84.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|