Carg06939 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATGGGAACAGAGTATCCAAGCGCCTGGCTTTATATATACACCCAGAGAGATGCTATGGGTCTTTGTCTTTGAGCTCCCACGCCTACGATTCCATGGCAACAATCTATCCATTCTTCGTCTTTCTCTCTTTCTTCATCTCCTCCGCCATGGCTGTCGCTATGCCCCAAGTGGAACACTCCTTTGCAAGAACGGTGGACAGAAAACTTATGGGTTACAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTATGAGTGGCAAAAACCCAACCTCGATCCAAGTGGTGCCCCCTGTCTCGAACATGTCGAGCACATTTTTCGGGACCGTCCAAATGATCGACAACCCATTAACAGCAACTCCAGATCCGAAGTCGAAACTATGGGGAAGAGCTCAGGGATTGTACGCATCGACTTCGCAGGAGGAGCTTGTGCTGTTAATGGCGATGAATTTGGAGTTTACGAGCGGGAAATATAAGGGGAGCTCCATCACTATATTTGGAAGAAACCAAGTTATGGCAAAAGTTAGGGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTCGCGAGAGGGTATGCGGAAGCCAGAACCAGCAAGGTGGATTTCAAGACCGGGGATGCCGTTGTTGAATACAACATTTACGTACTTCATTATTGACCCCATTTATTTTTTTGTCTGTGTTTGCGTTTTGTTTCCTTAATTTAGTTGTTTGGAACAGAACAGAGTATGTTTTTGGTTTCAATAATTTAAATGTCTGTTTGTGTTAGTGGGTTTGGTGGGTGAAAGTGGAAGGCTGGGAGTGGGTTTCCTTTATTGTCTCATTTCAAACCTCCATTAACTTTTCTTCACATTCTACAAACTATATGAATTGCGAACCCGAGAAGGATTGGTTGAACAAACAAGCTCTGCTGCAGCTACCAAGCAACACTCAGATGTTGTGAGCTCCATAAGGAATACATCTCTATTCAAATTAAGTATTTTTAGAGAAATTGGAAACAAACCCACTATAAGCTCAAATTTGATAATATTATAACACTGTTAAGATGGGTGATTCCTAACCTCGATGATGAAGTAAAGATACCCAAAAGATGGAAGGATTAGATGATGGAAGGCCACCCTTAAGTGACAAGTCTATCTCCCGTTTCCTTTACGTTTTTAATTTAAATATCATTTTCACGTGTTTTCAAGATCTTAAAGAGGTAAAAGACCTATTTCTTTCCCTTAAAAAGTCTTATATCAATTTAAATAATTGTTTTTTATTATTCTTAGAGACTTCGGGGTCACTCCAGGTTCACATGATCCACGTGTAAATATGGGATTGGTTGAATCATAATGATGAACCGCACTAACACTTGGCACATGTACTCTTACTCAGCTTTTTTTTTTTTTTTTTTTTTATAATAAATTTACAATTGTTACTGATAATGAGACAAAATTGTTGGATGACAATTTTTATAGTAATAGATGAACAATATAACATAATATAATTAATGGAAAATTGATTTTTAGGATTCTTTTGATAAAATAATTTCAAAATTCAAGAAATAAAATCCTTTATCATTTATGATATTTTGATGATCAAACCATAAATTTTCATGAACGACATTAAACATTTTCTTTTAGTGCGCGGGTAGCAAAGGAAAAAGAGAGATTAATTAGAACAATGAATCCGACCGTACCTCCATGATTGGAACGTTTTCCGTCAGTCACAGTTAAAGGTATCTCATGATTCACACGTCTATATAAAAAGGCTTGTTTAGTTCATAAGTTCAGGAACCTGAAGCTCCAAAAGACCGGGTGGGAAAGAAACAGAGTTCCGGCAGGCATGGAAGGTAAAGTCAGGATTTTGAGCGTTATTTTGTTGTCGTTGGCCATCCACAATTGGGTGGTCAGGGTAATGGGAAAGAAGGAGGGATATGCAAGCGAGCTAGACCCCAAAGTGTTGAAGCTGAAGAAAGAGAAGCTCACCCATTTTCACTTGTACTGGCACGACACAGTGGGCGGGAGAAACCCATCGAGCGTGGCAGTATTGCCATCGCTGAAGAACGGGTCGACGTTGGGGCTGATGCACATGTTCGACAACCCATTAAGCGTCGGGCCTGACCTTAAAAAGTCGGAGCTGGTTGGGAGGTCGCAAGGGATTTATGCTTCTACTGCACTAGACCAGGTGGGGCTTCTCATGGCCATGAATTTCGCTTTCACTCACGGTAAATACAACGGCAGCAGCATCACCATCTTGGGCCGCAACGCCATCCTCCAGAGGGTTCGTGAATTGCCCATCATCGGTGGCAGTGGCCGCTTCCGCTTGGCCAGAGGCTATGCTCTTGCCAAAACTTACTATTTCAACCCCGCCACTTTTGATGCCATCATCCAGTACGATGTTTATGTCTTGCATTATTGA ATGGAAAATGGGAACAGAGTATCCAAGCGCCTGGCTTTATATATACACCCAGAGAGATGCTATGGGTCTTTGTCTTTGAGCTCCCACGCCTACGATTCCATGGCAACAATCTATCCATTCTTCGTCTTTCTCTCTTTCTTCATCTCCTCCGCCATGGCTGTCGCTATGCCCCAAGTGGAACACTCCTTTGCAAGAACGGTGGACAGAAAACTTATGGGTTACAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTATGAGTGGCAAAAACCCAACCTCGATCCAAGTGGTGCCCCCTGTCTCGAACATGTCGAGCACATTTTTCGGGACCGTCCAAATGATCGACAACCCATTAACAGCAACTCCAGATCCGAAGTCGAAACTATGGGGAAGAGCTCAGGGATTGTACGCATCGACTTCGCAGGAGGAGCTTGTGCTGTTAATGGCGATGAATTTGGAGTTTACGAGCGGGAAATATAAGGGGAGCTCCATCACTATATTTGGAAGAAACCAAGTTATGGCAAAAGTTAGGGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTCGCGAGAGGGTATGCGGAAGCCAGAACCAGCAAGGTGGATTTCAAGACCGGGGATGCCGTTGTTGAATACAACATTTACAGACTTCGGGGTCACTCCAGGAACCTGAAGCTCCAAAAGACCGGGTGGGAAAGAAACAGAGTTCCGGCAGGCATGGAAGGTAAAGTCAGGATTTTGAGCGTTATTTTGTTGTCGTTGGCCATCCACAATTGGGTGGTCAGGGTAATGGGAAAGAAGGAGGGATATGCAAGCGAGCTAGACCCCAAAGTGTTGAAGCTGAAGAAAGAGAAGCTCACCCATTTTCACTTGTACTGGCACGACACAGTGGGCGGGAGAAACCCATCGAGCGTGGCAGTATTGCCATCGCTGAAGAACGGGTCGACGTTGGGGCTGATGCACATGTTCGACAACCCATTAAGCGTCGGGCCTGACCTTAAAAAGTCGGAGCTGGTTGGGAGGTCGCAAGGGATTTATGCTTCTACTGCACTAGACCAGGTGGGGCTTCTCATGGCCATGAATTTCGCTTTCACTCACGGTAAATACAACGGCAGCAGCATCACCATCTTGGGCCGCAACGCCATCCTCCAGAGGGTTCGTGAATTGCCCATCATCGGTGGCAGTGGCCGCTTCCGCTTGGCCAGAGGCTATGCTCTTGCCAAAACTTACTATTTCAACCCCGCCACTTTTGATGCCATCATCCAGTACGATGTTTATGTCTTGCATTATTGA ATGGAAAATGGGAACAGAGTATCCAAGCGCCTGGCTTTATATATACACCCAGAGAGATGCTATGGGTCTTTGTCTTTGAGCTCCCACGCCTACGATTCCATGGCAACAATCTATCCATTCTTCGTCTTTCTCTCTTTCTTCATCTCCTCCGCCATGGCTGTCGCTATGCCCCAAGTGGAACACTCCTTTGCAAGAACGGTGGACAGAAAACTTATGGGTTACAGAAAAGAGAAGCTCAGCCACTTCCGTTTCTACTGGCACGACGTTATGAGTGGCAAAAACCCAACCTCGATCCAAGTGGTGCCCCCTGTCTCGAACATGTCGAGCACATTTTTCGGGACCGTCCAAATGATCGACAACCCATTAACAGCAACTCCAGATCCGAAGTCGAAACTATGGGGAAGAGCTCAGGGATTGTACGCATCGACTTCGCAGGAGGAGCTTGTGCTGTTAATGGCGATGAATTTGGAGTTTACGAGCGGGAAATATAAGGGGAGCTCCATCACTATATTTGGAAGAAACCAAGTTATGGCAAAAGTTAGGGAGATGCCTGTGATCGGTGGAAGTGGGCTGTTCAGATTCGCGAGAGGGTATGCGGAAGCCAGAACCAGCAAGGTGGATTTCAAGACCGGGGATGCCGTTGTTGAATACAACATTTACAGACTTCGGGGTCACTCCAGGAACCTGAAGCTCCAAAAGACCGGGTGGGAAAGAAACAGAGTTCCGGCAGGCATGGAAGGTAAAGTCAGGATTTTGAGCGTTATTTTGTTGTCGTTGGCCATCCACAATTGGGTGGTCAGGGTAATGGGAAAGAAGGAGGGATATGCAAGCGAGCTAGACCCCAAAGTGTTGAAGCTGAAGAAAGAGAAGCTCACCCATTTTCACTTGTACTGGCACGACACAGTGGGCGGGAGAAACCCATCGAGCGTGGCAGTATTGCCATCGCTGAAGAACGGGTCGACGTTGGGGCTGATGCACATGTTCGACAACCCATTAAGCGTCGGGCCTGACCTTAAAAAGTCGGAGCTGGTTGGGAGGTCGCAAGGGATTTATGCTTCTACTGCACTAGACCAGGTGGGGCTTCTCATGGCCATGAATTTCGCTTTCACTCACGGTAAATACAACGGCAGCAGCATCACCATCTTGGGCCGCAACGCCATCCTCCAGAGGGTTCGTGAATTGCCCATCATCGGTGGCAGTGGCCGCTTCCGCTTGGCCAGAGGCTATGCTCTTGCCAAAACTTACTATTTCAACCCCGCCACTTTTGATGCCATCATCCAGTACGATGTTTATGTCTTGCATTATTGA MENGNRVSKRLALYIHPERCYGSLSLSSHAYDSMATIYPFFVFLSFFISSAMAVAMPQVEHSFARTVDRKLMGYRKEKLSHFRFYWHDVMSGKNPTSIQVVPPVSNMSSTFFGTVQMIDNPLTATPDPKSKLWGRAQGLYASTSQEELVLLMAMNLEFTSGKYKGSSITIFGRNQVMAKVREMPVIGGSGLFRFARGYAEARTSKVDFKTGDAVVEYNIYRLRGHSRNLKLQKTGWERNRVPAGMEGKVRILSVILLSLAIHNWVVRVMGKKEGYASELDPKVLKLKKEKLTHFHLYWHDTVGGRNPSSVAVLPSLKNGSTLGLMHMFDNPLSVGPDLKKSELVGRSQGIYASTALDQVGLLMAMNFAFTHGKYNGSSITILGRNAILQRVRELPIIGGSGRFRLARGYALAKTYYFNPATFDAIIQYDVYVLHY
BLAST of Carg06939 vs. NCBI nr
Match: XP_022944408.1 (dirigent protein 7-like [Cucurbita moschata]) HSP 1 Score: 440.7 bits (1132), Expect = 6.0e-120 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Carg06939 vs. NCBI nr
Match: XP_023513147.1 (dirigent protein 7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 428.7 bits (1101), Expect = 2.3e-116 Identity = 214/222 (96.40%), Postives = 218/222 (98.20%), Query Frame = 0
BLAST of Carg06939 vs. NCBI nr
Match: XP_022985846.1 (dirigent protein 7-like [Cucurbita maxima]) HSP 1 Score: 428.3 bits (1100), Expect = 3.1e-116 Identity = 213/222 (95.95%), Postives = 216/222 (97.30%), Query Frame = 0
BLAST of Carg06939 vs. NCBI nr
Match: XP_022944410.1 (dirigent protein 22-like [Cucurbita moschata]) HSP 1 Score: 375.6 bits (963), Expect = 2.4e-100 Identity = 186/191 (97.38%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Carg06939 vs. NCBI nr
Match: GAY58138.1 (hypothetical protein CUMW_184790 [Citrus unshiu]) HSP 1 Score: 367.5 bits (942), Expect = 6.4e-98 Identity = 189/405 (46.67%), Postives = 257/405 (63.46%), Query Frame = 0
BLAST of Carg06939 vs. TAIR10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 202.2 bits (513), Expect = 6.5e-52 Identity = 101/181 (55.80%), Postives = 130/181 (71.82%), Query Frame = 0
BLAST of Carg06939 vs. TAIR10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 202.2 bits (513), Expect = 6.5e-52 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0
BLAST of Carg06939 vs. TAIR10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-50 Identity = 97/181 (53.59%), Postives = 131/181 (72.38%), Query Frame = 0
BLAST of Carg06939 vs. TAIR10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 195.7 bits (496), Expect = 6.1e-50 Identity = 96/162 (59.26%), Postives = 124/162 (76.54%), Query Frame = 0
BLAST of Carg06939 vs. TAIR10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-44 Identity = 90/188 (47.87%), Postives = 129/188 (68.62%), Query Frame = 0
BLAST of Carg06939 vs. Swiss-Prot
Match: sp|Q9C891|DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-50 Identity = 101/181 (55.80%), Postives = 130/181 (71.82%), Query Frame = 0
BLAST of Carg06939 vs. Swiss-Prot
Match: sp|Q9LID5|DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-50 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0
BLAST of Carg06939 vs. Swiss-Prot
Match: sp|Q9C523|DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.2e-49 Identity = 97/181 (53.59%), Postives = 131/181 (72.38%), Query Frame = 0
BLAST of Carg06939 vs. Swiss-Prot
Match: sp|Q9FI66|DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-48 Identity = 96/162 (59.26%), Postives = 124/162 (76.54%), Query Frame = 0
BLAST of Carg06939 vs. Swiss-Prot
Match: sp|Q9SS03|DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 5.3e-43 Identity = 90/188 (47.87%), Postives = 129/188 (68.62%), Query Frame = 0
BLAST of Carg06939 vs. TrEMBL
Match: tr|A0A2H5Q0I4|A0A2H5Q0I4_CITUN (Dirigent protein OS=Citrus unshiu OX=55188 GN=CUMW_184790 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.2e-98 Identity = 189/405 (46.67%), Postives = 257/405 (63.46%), Query Frame = 0
BLAST of Carg06939 vs. TrEMBL
Match: tr|A0A118JU72|A0A118JU72_CYNCS (Dirigent protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_007373 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.9e-92 Identity = 183/403 (45.41%), Postives = 268/403 (66.50%), Query Frame = 0
BLAST of Carg06939 vs. TrEMBL
Match: tr|A0A2H5MXI3|A0A2H5MXI3_CITUN (Dirigent protein OS=Citrus unshiu OX=55188 GN=CUMW_003810 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 4.3e-74 Identity = 158/360 (43.89%), Postives = 211/360 (58.61%), Query Frame = 0
BLAST of Carg06939 vs. TrEMBL
Match: tr|A0A1S3BNH6|A0A1S3BNH6_CUCME (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103491573 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 6.2e-73 Identity = 145/193 (75.13%), Postives = 158/193 (81.87%), Query Frame = 0
BLAST of Carg06939 vs. TrEMBL
Match: tr|A0A2N9EP36|A0A2N9EP36_FAGSY (Dirigent protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4332 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 8.1e-73 Identity = 158/353 (44.76%), Postives = 211/353 (59.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |