Carg06932 (gene) Silver-seed gourd

NameCarg06932
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_065 : 385830 .. 386150 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGCAAGTGCGACGCCAACCTGACCCCAACATTATCGCGGACGCACTTTATCATCGCTTGCCAGCTCGGACGACGGAAACAACCGTTATTCCACTTTGACGTCGCACCGACGGACGAGTTTGCGACAACGCTATATTACACCGATGTTGGTCGGCATCGAGTCTTTTCCAATCGGATCAAGAGCTTTTCTCCACCGAAGGGGCCGAAACCATCGCCGCCGACAACCGTTTTGCCACCAATCAGTCCTGCATCCTTGGCTCCAGTTCCGGTGAGTCTGATGATTAAAGATGGCGGAAGCATTGAACCCTTTAATTGA

mRNA sequence

ATGGCATGCAAGTGCGACGCCAACCTGACCCCAACATTATCGCGGACGCACTTTATCATCGCTTGCCAGCTCGGACGACGGAAACAACCGTTATTCCACTTTGACGTCGCACCGACGGACGAGTTTGCGACAACGCTATATTACACCGATGTTGGTCGGCATCGAGTCTTTTCCAATCGGATCAAGAGCTTTTCTCCACCGAAGGGGCCGAAACCATCGCCGCCGACAACCGTTTTGCCACCAATCAGTCCTGCATCCTTGGCTCCAGTTCCGGTGAGTCTGATGATTAAAGATGGCGGAAGCATTGAACCCTTTAATTGA

Coding sequence (CDS)

ATGGCATGCAAGTGCGACGCCAACCTGACCCCAACATTATCGCGGACGCACTTTATCATCGCTTGCCAGCTCGGACGACGGAAACAACCGTTATTCCACTTTGACGTCGCACCGACGGACGAGTTTGCGACAACGCTATATTACACCGATGTTGGTCGGCATCGAGTCTTTTCCAATCGGATCAAGAGCTTTTCTCCACCGAAGGGGCCGAAACCATCGCCGCCGACAACCGTTTTGCCACCAATCAGTCCTGCATCCTTGGCTCCAGTTCCGGTGAGTCTGATGATTAAAGATGGCGGAAGCATTGAACCCTTTAATTGA

Protein sequence

MACKCDANLTPTLSRTHFIIACQLGRRKQPLFHFDVAPTDEFATTLYYTDVGRHRVFSNRIKSFSPPKGPKPSPPTTVLPPISPASLAPVPVSLMIKDGGSIEPFN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06932-RACarg06932-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..82

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06932Silver-seed gourdcarcarB209
Carg06932Silver-seed gourdcarcarB381
Carg06932Silver-seed gourdcarcarB452
Carg06932Silver-seed gourdcarcarB463
Carg06932Silver-seed gourdcarcarB498
Carg06932Cucumber (Gy14) v2carcgybB0527
Carg06932Cucumber (Gy14) v2carcgybB0529
Carg06932Cucumber (Gy14) v1carcgyB0593
Carg06932Cucumber (Gy14) v1carcgyB0599
Carg06932Cucumber (Gy14) v1carcgyB0603
Carg06932Cucurbita maxima (Rimu)carcmaB0726
Carg06932Cucurbita maxima (Rimu)carcmaB0730
Carg06932Cucurbita maxima (Rimu)carcmaB0732
Carg06932Cucurbita maxima (Rimu)carcmaB0733
Carg06932Cucurbita maxima (Rimu)carcmaB0734
Carg06932Cucurbita moschata (Rifu)carcmoB0703
Carg06932Cucurbita moschata (Rifu)carcmoB0704
Carg06932Cucurbita moschata (Rifu)carcmoB0707
Carg06932Cucurbita moschata (Rifu)carcmoB0709
Carg06932Cucurbita moschata (Rifu)carcmoB0710
Carg06932Cucurbita moschata (Rifu)carcmoB0711
Carg06932Cucurbita pepo (Zucchini)carcpeB0732
Carg06932Cucurbita pepo (Zucchini)carcpeB0733
Carg06932Cucurbita pepo (Zucchini)carcpeB0734
Carg06932Cucurbita pepo (Zucchini)carcpeB0735
Carg06932Cucurbita pepo (Zucchini)carcpeB0741
Carg06932Wild cucumber (PI 183967)carcpiB0558
Carg06932Wild cucumber (PI 183967)carcpiB0559
Carg06932Wild cucumber (PI 183967)carcpiB0561
Carg06932Cucumber (Chinese Long) v2carcuB0552
Carg06932Cucumber (Chinese Long) v2carcuB0554
Carg06932Cucumber (Chinese Long) v3carcucB0557
Carg06932Cucumber (Chinese Long) v3carcucB0559
Carg06932Cucumber (Chinese Long) v3carcucB0561
Carg06932Bottle gourd (USVL1VR-Ls)carlsiB471
Carg06932Bottle gourd (USVL1VR-Ls)carlsiB473
Carg06932Melon (DHL92) v3.5.1carmeB0526
Carg06932Melon (DHL92) v3.5.1carmeB0528
Carg06932Melon (DHL92) v3.6.1carmedB0532
Carg06932Melon (DHL92) v3.6.1carmedB0533
Carg06932Watermelon (Charleston Gray)carwcgB0503
Carg06932Watermelon (97103) v1carwmB0520
Carg06932Watermelon (97103) v2carwmbB0543
Carg06932Wax gourdcarwgoB0629
Carg06932Wax gourdcarwgoB0634