Carg06887 (gene) Silver-seed gourd

NameCarg06887
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_065 : 166884 .. 168094 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACGGAATAGAAATTCACACTCTTCATCGTCTTCTTCCTCCTGAATCTGTTGTTAACGTTGCCACCTGGCGCATCTTTGCCGCCGCCGCCGCCGCCGTCGTCGACGACCATTTGAAATTCCTTGTTTTTTTCTTCCAAACTCGGCAATCCGAGCAGATTTTCGCTTTGCCGCCAATTCAGTTCCCGCGACTCACAATTGGCGCCGACGATAGGAATAGGATAACTCTTAGCATGCGCGTTATTTCCATCTTGATAAGTTGAACTTCATTCTCTGTCGTGCTTGCTTTCTGAAGGTGAGGGACTTCTGTTTTCGATCATCTATTTCCCTCTGCCTCCCGATCGTTCATTCCGCCGTAATTTCGAAGCCTTTTTCTTAAGGATTCTGATTGTGGATTGGGAGTTTGTTTGAATGCTAGGGTTTTTTCTGGGAGGGGTTCGAGGGGTTTTAGCTTTCAAAATGTTTATCGGCATTAGCTTGTTGATCTGAATATTGCAGTGTGGAATATATTTTTAGCATTAGCTTTCTGCTTTATTTGAATTTGTCTCCCCTACCGATATCCTCGTGTTTAGAATTCGATGAAGGAATTTTCTTTCTGATTGATGAACGAATTGCTTAGTCTCGAGTCACGTCTGTACACTCACTCGGGCTTCGTCGCATGCTGCACCTTCAGCTTGGATTTTGCATAAAAGAAGTAACTTCAAATAGGAGCTGATTCGTACTAAACTGTGCGGTTCAATTCTATACATTTGCTTAATTCATCTTTTGTTTGAAATAATTGCTGTGGTTCACCTATAACTGTTTTCTGCTGAACAAAAGAAACTACAAGCTGGTTTGTTGAATGTATGAGGTAAGTCAAGTCATCCAATGTATTTTGGGAGTTTTAACAAGGAATCTACAATAAAGTGTGCAGGACGGTGCCTACCAAGCTTTTCTTATACTAGTTTCTTTCTTGGACATTTTCTTGAGATTCTTGTTCCCGCTTTCTGTATTGTTGCTTTTCTCATTCACCACCCTTAGTTTTCTGTCTTCCTGATACGGGATATTTTTATGTTTTTTAATCCTTGTCCTTTTATATGGAAAAGCTTAATTTTTCTCGTATATTACTTTCCAATTTGATTGAGATGAGATAGTATGATGTTTATCCTTGCCATCTTGTTTGAACATGTTCTTATTTCAGGATACAAAGCTTCTTTTTCACCAGCACTAA

mRNA sequence

TTAAACGGAATAGAAATTCACACTCTTCATCGTCTTCTTCCTCCTGAATCTGTTGTTAACGTTGCCACCTGGCGCATCTTTGCCGCCGCCGCCGCCGCCGTCGTCGACGACCATTTGAAATTCCTTGTTTTTTTCTTCCAAACTCGGCAATCCGAGCAGATTTTCGCTTTGCCGCCAATTCAGTTCCCGCGACTCACAATTGGCGCCGACGATAGGAATAGGATAACTCTTAGCATGCGCGATACAAAGCTTCTTTTTCACCAGCACTAA

Coding sequence (CDS)

TTAAACGGAATAGAAATTCACACTCTTCATCGTCTTCTTCCTCCTGAATCTGTTGTTAACGTTGCCACCTGGCGCATCTTTGCCGCCGCCGCCGCCGCCGTCGTCGACGACCATTTGAAATTCCTTGTTTTTTTCTTCCAAACTCGGCAATCCGAGCAGATTTTCGCTTTGCCGCCAATTCAGTTCCCGCGACTCACAATTGGCGCCGACGATAGGAATAGGATAACTCTTAGCATGCGCGATACAAAGCTTCTTTTTCACCAGCACTAA

Protein sequence

LNGIEIHTLHRLLPPESVVNVATWRIFAAAAAAVVDDHLKFLVFFFQTRQSEQIFALPPIQFPRLTIGADDRNRITLSMRDTKLLFHQH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06887-RACarg06887-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06887CmaCh20G001010Cucurbita maxima (Rimu)carcmaB0732
Carg06887Cla97C02G049070Watermelon (97103) v2carwmbB0543
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06887Silver-seed gourdcarcarB463
Carg06887Silver-seed gourdcarcarB498
Carg06887Cucumber (Gy14) v2carcgybB0527
Carg06887Cucumber (Gy14) v2carcgybB0530
Carg06887Cucumber (Gy14) v1carcgyB0598
Carg06887Cucurbita maxima (Rimu)carcmaB0726
Carg06887Cucurbita maxima (Rimu)carcmaB0727
Carg06887Cucurbita maxima (Rimu)carcmaB0733
Carg06887Cucurbita moschata (Rifu)carcmoB0703
Carg06887Cucurbita moschata (Rifu)carcmoB0704
Carg06887Cucurbita moschata (Rifu)carcmoB0709
Carg06887Cucurbita moschata (Rifu)carcmoB0710
Carg06887Cucurbita pepo (Zucchini)carcpeB0733
Carg06887Cucurbita pepo (Zucchini)carcpeB0735
Carg06887Cucurbita pepo (Zucchini)carcpeB0740
Carg06887Cucurbita pepo (Zucchini)carcpeB0741
Carg06887Wild cucumber (PI 183967)carcpiB0558
Carg06887Wild cucumber (PI 183967)carcpiB0560
Carg06887Cucumber (Chinese Long) v2carcuB0551
Carg06887Cucumber (Chinese Long) v2carcuB0553
Carg06887Cucumber (Chinese Long) v3carcucB0557
Carg06887Cucumber (Chinese Long) v3carcucB0560
Carg06887Bottle gourd (USVL1VR-Ls)carlsiB471
Carg06887Bottle gourd (USVL1VR-Ls)carlsiB477
Carg06887Melon (DHL92) v3.5.1carmeB0527
Carg06887Melon (DHL92) v3.5.1carmeB0528
Carg06887Melon (DHL92) v3.6.1carmedB0533
Carg06887Watermelon (Charleston Gray)carwcgB0503
Carg06887Watermelon (Charleston Gray)carwcgB0505
Carg06887Watermelon (97103) v1carwmB0516
Carg06887Watermelon (97103) v1carwmB0520
Carg06887Watermelon (97103) v2carwmbB0546
Carg06887Wax gourdcarwgoB0629
Carg06887Wax gourdcarwgoB0635