Carg06879 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06879
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ankyrin repeat-containing protein
Location	Cucurbita_argyrosperma_scaffold_065 : 103329 .. 107422 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACGCCTCAAGTTCTAGCTTTGCTCTGACGCTGCAACCAGTAGGTGCTTCGCTCTCTTCTCCTAGAATCGCCGATTTAGGGTTTCTGCGTGTTCTCTGGTTCACTTTCTCTTTACAGTGTTAGACTGATTAGTCGATCGTCAGGAAGAGTTACAGTCCAGATTGTCAAGGATTCTTCACGTTGGAGACTTCAGCGGCAGCACGATGGTAGTGGAAGAGAATCGATTGGAAGATCTGAGTACCGTGGGAACGACTACGGATGACATCGAAGCTCTGGTTGATGTAAAATCTTCATCCTCTTTCTTTATTAAATCATTTATTTCTGGTTTGTTCACTTTTCCTTCCGTATAGTTTTCCTTTCATATCTCTTTATCTTCTTATCAATCTTTCATATAGTTTTCCTTGGTGCATTTAAACGAATTCGCGTTCAAGTTCAGTGAACCTTCAATCTTTTATACCACATGTTTAAATAGCAATAAAAGTCGCTCAGTCTTGTCCTCAACCAATTCTCGAGAAAGCATAAATGAAAAATTCGTATGTGACTGTTATTCTTTTCTATATTTTTCAGAATTTGCACAATATCTGCGGTTCATTGAAGCTTTTGGTTTGAATTATAACAAGCAAATTTCTAGAAAATGCGGATGTTTCCTATTCGATGCTAAGGAATCTAAAATGATGTTTCCTATTCGATGCTAAGGAATCTAAAATGATGTTTCCTATTCGATGCTAAGGAATCTAAAATGATGTTTCCTATTCGATGATAAGGAATCTAAAATGAACACTACTCTGCCGCGTTAAGTGTCGTGGTAGAAGCTATGTTTCTACAATTTTAAGTCATCATAAGGTCATAGAACGTCATGGAGAGCATTTTGGTTCGCATTTTGGTTCGCATTTTGACCAAGGAAACGATGAACAACAAGAATACTGAGAATACTGTGGATTAGCAAATTGATCACCTATGCAATGATTTTGGAAACTTAGTACATCATATTTGAGAAACTAATCTATATATTTGTTATTTAAGGGTTCAGTAATGAAGGACTTGGATTTTGTGATGTCACTTGACAGGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGGTATTTTTCTTCAATATTTAACAATATGCTTTTTTAATTTATTTATGGTATTTTTCTTCAATATTTAACAATATGCTTTTTTAATTTATTTATGTGCATCACAATAGCTTGATATAGAAATCCAATAATTTTATGAGTTTTTGTTAAATCGCCATTAAACAAAATGCCTAAGCTTATGAGATGATTGATTGGTGATTCAAAATGGTATCAGAGTAGGAGTTAGAGCATGAGGTCCTATGTTCAAACCCTATGATGTCATATCTTCAATCCCATAAGTGAGGAAAGTGTTGAAGTGGTTTGTTGAAAACTTTGATATCCCTGTTAAATCACTCGTTAACCAAAAAGGTTGCTTGATGATTTAACAAGTTTAGTCTACGACTTATGTTCCCTCAGCTATTCCAACATTTCAATTAAAGCTTTTGTTCCTATTAAGAAACACTTAAGCTGAATTGATAAACATTTTGTTTTTGAAAACTAAGCTCATAAACACTATTTTCTTTTATAGCTTTCTTGTTTTGTTACCTATTTTTGGAAACATTCTAAAATATGAAGCCAATATTTTGAAACTAAAAAAAAAAAAGAAGAATGTAGTTCTTACATTTTGGATTTTGTTTTTTTAATTTTGGCTTACAATTGAGAAGTGTTTTTAAGAAATGTGAAACGCCTAACCAAAAGTGTTTAAGAAACAAGCAATATATTAAAACAGAAAAAAATCTTAAACAAGATGGTTATTGAATGGGGACTTTTACTCTATTGAACATACCCGTACTTTCTGTCCTGGTATATTTTGTAATTCAATTTACAAACAACAATTTTTTAGTTAGTCGAGGTTCTCAGATGTGAACTTAATTGATTTTGTTTTGGGTGTAAGAATATTTTGCTAATTTCTAGACCATTCGATGAGTATGGAGTCATTGAGAAAGCTATCAAGTCAGCTCTTTCATTGTAATCTCTGTTATTTGATTGTAGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGTAAGATATCTACTTGTAATTTTACCTGCTGCTTGGGTTATCTATTTTTCTCCACTGACTAATAGTTGACAGAGGGGTTAGCCTTTCTCAAGAAACATCTCCTTGCATCAGTTTTCCATGCATCTGTGTTATCCATAATGATGATTATATTACCGTATCATCATCATTCTTGTCGTCATTCTGGCTGTTGAACTATTTAGTTAATGAATTTGGACTGCTACAATTCCTTTTGTCTGATTGATTTGAACTTGGTTATTTTTCCAACGACTCTAGTCCCGTTATATATATTCTGTTGTAGTGTTTTATACTGGATACAGTTCAATTCAGTTTGTTCACTTGTATGTTTGTCACCGACTTGCCTTACTCTGTATCTTCCCAATTTATTTTAATCTTCTGTTTGATGAAAATGGCAATTGTAACTTACCATTTTAAATCCTGTGATTGGATTCAGCGAATTTTACCCATGCAATCTTGACCTCCAATCTTATTTTTAACCTCTTCGAGTGTGAACAGGATGTGAATGCTTTGAATGCGGAGAAGAATACACCACTTCATTGGGCATGTCTGAATGGGCATATTGAGGTAATGCTCTAAATTCTATAGCTAATTTCTAGGTTTAGTTTCTGATTTTTCATATCTTATATATCTCCTAACTTCAATAATGGATAAGTTAAAGAACTTTAAACGTATCAAATAGAACATTAAAACTTTCAATTTTGTAGTTGATAGATTGTTTGTTTATTCAACATTTTCTGAATTTTCAAACCTACTAAACATTAAATTGATTAAAAGAATTTTAAACTTCTAATTTTATATTCATTGGGGTCATAATTTTTGACAAGTTGGACTTGAAATAGAAAATTTAGAAAATTGAGGAACTTATTAGACACTTCTTACCATAAAAATTCTATTTCTCATCTTGTTTACTCATTCCTTTAGGTGGTTAAAAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGGTATGTTATATTTTATAACTAGATGAGAGATTTAATAAAAACATTATAAAATGGATCTCTATCTGTTCGTAAAATTTTAAACATTATATTTGTGTATAGCCATGAGAAAACTCCCATGGATGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACGGCAGTGGCGCAAATCGAGCTCTCGGGCATCAGTGTTTCAAGTATGGAAACATAGGTGAGGGAATTCGACATTTTTTATTATTTATTTGCTTAATAAGTAGGAAAAATTCTCAGTCTTAGGATCAGAAATATGCTTCCATCTTATTTTGCACTTCTCCACCCAGGAACTCTTAGTTAGAGTTTCAAATTACTTTGAACTAAAAATTAAGCATCCATCTCCTTTTGAATACCCCAATTACTTTCTTTTCAATTTCGCATATTTTAATTAGATATGCAGTTATTTCTAAAAAATTATATAAAAGTACGCAATGGAAGGCATAAAGGGAATTTACTTTTATTTTATTTATATAGCCGATCGAATAATTATTGTCGTTAACATCTAGTTTTTTCTTTTCACCCAAATCTTTATTTTTATTGATTAGTATTTTCAAAAATATATTTTATTTCTTTGTTTTATAACAACCCCTAAATCTCCTTTTCTGTGGACACTGACTGATTACCTGAAATGGCAACAATATGGGTGCTAAAACTATTTTTAAAAAAATTCAGTCACAAGCATTATATCTGAAAATCTGTCTGTTCTGCATTTGACCTTAAAATATAAAAAGAGTCAACCAACCATACCATTTAAATCTGGTTATTTATCATGTCTTCAATTTTTACCAGATAAAAATTAATTCTCATGTATCCATGACTATTACTTGAAATCATATTTTATTTTGAAATATTGTAAAATAAATTACTAAT

mRNA sequence

TAACGCCTCAAGTTCTAGCTTTGCTCTGACGCTGCAACCAGTAGGTGCTTCGCTCTCTTCTCCTAGAATCGCCGATTTAGGGTTTCTGCGTGTTCTCTGGTTCACTTTCTCTTTACAGTGTTAGACTGATTAGTCGATCGTCAGGAAGAGTTACAGTCCAGATTGTCAAGGATTCTTCACGTTGGAGACTTCAGCGGCAGCACGATGGTAGTGGAAGAGAATCGATTGGAAGATCTGAGTACCGTGGGAACGACTACGGATGACATCGAAGCTCTGGTTGATGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGATGTGAATGCTTTGAATGCGGAGAAGAATACACCACTTCATTGGGCATGTCTGAATGGGCATATTGAGGTGGTTAAAAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGCCATGAGAAAACTCCCATGGATGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACGGCAGTGGCGCAAATCGAGCTCTCGGGCATCAGTGTTTCAAGTATGGAAACATAGGTGAGGGAATTCGACATTTTTTATTATTTATTTGCTTAATAAGTAGGAAAAATTCTCAGTCTTAGGATCAGAAATATGCTTCCATCTTATTTTGCACTTCTCCACCCAGGAACTCTTAGTTAGAGTTTCAAATTACTTTGAACTAAAAATTAAGCATCCATCTCCTTTTGAATACCCCAATTACTTTCTTTTCAATTTCGCATATTTTAATTAGATATGCAGTTATTTCTAAAAAATTATATAAAAGTACGCAATGGAAGGCATAAAGGGAATTTACTTTTATTTTATTTATATAGCCGATCGAATAATTATTGTCGTTAACATCTAGTTTTTTCTTTTCACCCAAATCTTTATTTTTATTGATTAGTATTTTCAAAAATATATTTTATTTCTTTGTTTTATAACAACCCCTAAATCTCCTTTTCTGTGGACACTGACTGATTACCTGAAATGGCAACAATATGGGTGCTAAAACTATTTTTAAAAAAATTCAGTCACAAGCATTATATCTGAAAATCTGTCTGTTCTGCATTTGACCTTAAAATATAAAAAGAGTCAACCAACCATACCATTTAAATCTGGTTATTTATCATGTCTTCAATTTTTACCAGATAAAAATTAATTCTCATGTATCCATGACTATTACTTGAAATCATATTTTATTTTGAAATATTGTAAAATAAATTACTAAT

Coding sequence (CDS)

ATGGTAGTGGAAGAGAATCGATTGGAAGATCTGAGTACCGTGGGAACGACTACGGATGACATCGAAGCTCTGGTTGATGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGATGTGAATGCTTTGAATGCGGAGAAGAATACACCACTTCATTGGGCATGTCTGAATGGGCATATTGAGGTGGTTAAAAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGCCATGAGAAAACTCCCATGGATGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACGGCAGTGGCGCAAATCGAGCTCTCGGGCATCAGTGTTTCAAGTATGGAAACATAG

Protein sequence

MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLISKGVDVNALNAEKNTPLHWACLNGHIEVVKKLILSGANVSLLNSHEKTPMDEALTRGKMDVIDAINTAVAQIELSGISVSSMET

Homology

[Close]

BLAST of Carg06879 vs. NCBI nr
Match: XP_022943784.1 (ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita moschata] >XP_022943785.1 ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita moschata])

HSP 1 Score: 110.5 bits (275), Expect = 5.1e-21
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          MVVEENRLE+ STVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM
Sbjct: 1  MVVEENRLEEQSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 59

[Close]

BLAST of Carg06879 vs. NCBI nr
Match: XP_022987031.1 (ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima] >XP_022987033.1 ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima])

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALH 59
          MVVEENRLE+ STVGTTTDDIEALVDAARYND+DDVVSLASAGVHLDSKDSEGRTALH
Sbjct: 1  MVVEENRLEEQSTVGTTTDDIEALVDAARYNDIDDVVSLASAGVHLDSKDSEGRTALH 58

[Close]

BLAST of Carg06879 vs. NCBI nr
Match: XP_023513227.1 (ankyrin repeat domain-containing protein 2A [Cucurbita pepo subsp. pepo] >XP_023513228.1 ankyrin repeat domain-containing protein 2A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALH 59
          MVVEENRLE+ STVGT TDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALH
Sbjct: 1  MVVEENRLEEQSTVGTNTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALH 58

[Close]

BLAST of Carg06879 vs. NCBI nr
Match: XP_022943787.1 (ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita moschata])

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          +VVEENR E+ STV TT +DIEALV+AARYNDVDDVVSLASAGVHLDSKDSEGRTALHM
Sbjct: 2  VVVEENRSEEQSTVETTMNDIEALVEAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60

[Close]

BLAST of Carg06879 vs. NCBI nr
Match: XP_022987034.1 (ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita maxima])

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALH 59
          +VVEENR E+ STV TT +DIEALV+AARYND+DDVVSLASAGVHLDSKDSEGRTALH
Sbjct: 2  VVVEENRSEEQSTVETTMNDIEALVEAARYNDIDDVVSLASAGVHLDSKDSEGRTALH 59

[Close]

BLAST of Carg06879 vs. TAIR10
Match: AT5G12320.1 (ankyrin repeat family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 24/41 (58.54%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 19 DDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          + ++ L++AARYND+DD+ +LAS G+ L S+DS+GRTALHM
Sbjct: 10 EKVDDLLEAARYNDIDDLRTLASDGLSLHSRDSQGRTALHM 50

[Close]

BLAST of Carg06879 vs. TrEMBL
Match: tr|A0A1S3BNG7|A0A1S3BNG7_CUCME (ankyrin repeat-containing protein P16F5.05c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491475 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          MVVE N+ E+ STV TT +DIE LVDAARYND++DV  L SAGV LDSKDSEGRTALHM
Sbjct: 1  MVVEANQSEEQSTVQTTMNDIEDLVDAARYNDLEDVERLTSAGVCLDSKDSEGRTALHM 59

[Close]

BLAST of Carg06879 vs. TrEMBL
Match: tr|A0A0A0KI98|A0A0A0KI98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G431770 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.3e-12
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 1  MVVEENRLEDLSTVGTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          MVV+ N+ E+ STV TT +DIE LVDAARYND+DDV  LASAGV LDS DSE RTALHM
Sbjct: 1  MVVDANQSEEQSTVETTMNDIEDLVDAARYNDLDDVKRLASAGVCLDSTDSESRTALHM 59

[Close]

BLAST of Carg06879 vs. TrEMBL
Match: tr|A0A2G3CF43|A0A2G3CF43_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_13034 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 15 GTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          GTT++ IEAL++AARY+D+DDV+SLAS+GV LDSKDSEGRTALHM
Sbjct: 14 GTTSESIEALLEAARYDDLDDVMSLASSGVSLDSKDSEGRTALHM 58

[Close]

BLAST of Carg06879 vs. TrEMBL
Match: tr|A0A1U8GUL0|A0A1U8GUL0_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_14213 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 15 GTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          GTT++ IEAL++AARY+D+DDV+SLAS+GV LDSKDSEGRTALHM
Sbjct: 14 GTTSESIEALLEAARYDDLDDVMSLASSGVSLDSKDSEGRTALHM 58

[Close]

BLAST of Carg06879 vs. TrEMBL
Match: tr|A0A2G2ZGS2|A0A2G2ZGS2_CAPAN (ankyrin repeat domain-containing protein 54 OS=Capsicum annuum OX=4072 GN=LOC107870449 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 15 GTTTDDIEALVDAARYNDVDDVVSLASAGVHLDSKDSEGRTALHM 60
          GTT++ IEAL++AARY+D+DDV+SLAS+GV LDSKDSEGRTALHM
Sbjct: 14 GTTSESIEALLEAARYDDLDDVMSLASSGVSLDSKDSEGRTALHM 58

The following BLAST results are available for this feature:

BLAST of Carg06879 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943784.1	5.1e-21	96.61	ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022987031.1	2.5e-20	94.83	ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima] >XP_02...	[more]
XP_023513227.1	7.4e-20	94.83	ankyrin repeat domain-containing protein 2A [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022943787.1	3.4e-17	86.44	ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita moschata]	[more]
XP_022987034.1	1.7e-16	84.48	ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg06879 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12320.1	1.3e-07	58.54	ankyrin repeat family protein	[more]

BLAST of Carg06879 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg06879 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BNG7\|A0A1S3BNG7_CUCME	1.3e-12	74.58	ankyrin repeat-containing protein P16F5.05c isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0KI98\|A0A0A0KI98_CUCSA	8.3e-12	72.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G431770 PE=4 SV=1	[more]
tr\|A0A2G3CF43\|A0A2G3CF43_CAPCH	1.0e-09	77.78	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_13034 PE=4 SV=1	[more]
tr\|A0A1U8GUL0\|A0A1U8GUL0_CAPAN	1.0e-09	77.78	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_14213 PE=4 SV=1	[more]
tr\|A0A2G2ZGS2\|A0A2G2ZGS2_CAPAN	1.0e-09	77.78	ankyrin repeat domain-containing protein 54 OS=Capsicum annuum OX=4072 GN=LOC107...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06879-RA	Carg06879-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 53..68 score: 46.84 coord: 101..115 score: 34.33
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 85..114 e-value: 3.9E-7 score: 39.7 coord: 52..81 e-value: 3.1E-8 score: 43.4 coord: 118..147 e-value: 740.0 score: 6.0
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 85..117 score: 13.304
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 52..84 score: 15.734
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	G3DSA:1.25.40.20		coord: 4..150 e-value: 1.8E-37 score: 131.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	SSF48403	Ankyrin repeat	coord: 18..142
None	No IPR available	PFAM	PF13637	Ank_4	coord: 64..106 e-value: 6.9E-12 score: 45.5
None	No IPR available	PANTHER	PTHR45387	FAMILY NOT NAMED	coord: 14..153
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 19..150 score: 35.756
IPR020683	Ankyrin repeat-containing domain	CDD	cd00204	ANK	coord: 23..138 e-value: 3.02186E-33 score: 114.788

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06879	Cla008575	Watermelon (97103) v1	carwmB0520
Carg06879	Csa6G431770	Cucumber (Chinese Long) v2	carcuB0553
Carg06879	MELO3C014563	Melon (DHL92) v3.5.1	carmeB0528
Carg06879	ClCG02G022890	Watermelon (Charleston Gray)	carwcgB0503
Carg06879	CSPI06G23880	Wild cucumber (PI 183967)	carcpiB0560
Carg06879	Cucsa.087020	Cucumber (Gy14) v1	carcgyB0595
Carg06879	CmaCh20G001090	Cucurbita maxima (Rimu)	carcmaB0732
Carg06879	CmaCh02G012740	Cucurbita maxima (Rimu)	carcmaB0733
Carg06879	CmoCh20G001180	Cucurbita moschata (Rifu)	carcmoB0709
Carg06879	Lsi10G010880	Bottle gourd (USVL1VR-Ls)	carlsiB471
Carg06879	Cp4.1LG16g08540	Cucurbita pepo (Zucchini)	carcpeB0733
Carg06879	CsGy6G023230	Cucumber (Gy14) v2	carcgybB0530
Carg06879	MELO3C014563.2	Melon (DHL92) v3.6.1	carmedB0533
Carg06879	CsaV3_6G039020	Cucumber (Chinese Long) v3	carcucB0560
Carg06879	Cla97C02G048960	Watermelon (97103) v2	carwmbB0543
Carg06879	Bhi10G000199	Wax gourd	carwgoB0629

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06879	Silver-seed gourd	carcarB498
Carg06879	Cucurbita moschata (Rifu)	carcmoB0710
Carg06879	Cucurbita pepo (Zucchini)	carcpeB0741