Carg06553 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06553
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein NEOXANTHIN-DEFICIENT 1
Location	Cucurbita_argyrosperma_scaffold_051 : 1281779 .. 1285896 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTCAAAATGCTGCCACGTGTATCACCTTTTTTCATTGAAATCCGCCATCCATTGCCACCTCGACATCTTATCCTTCAAATTGGATATCCATTCCCCCTCTTCCTCTTCCAACGAACACGCCGAAAAGACCTCCATGGAAAATGGAGAGAAGAAACGCTCAACGGGTTACGGCAGGCCGCCATGGACATTCAGAGGAAGGTTATTGAAGAGCTCCGTTTACTTTTTTGTCTTCATTGCTTTCCATTTCTCTGATTTGACACTTCCCATTGTTCAGGGCTCTGTATCAACTGCATCTTGTTAAGGCTAAAACTGCTCGAAAGTGTATTCCAAAGGAGTTGAGACTCGTTGAAGCATTTGGGTATTGTTTAATCACTGAGATTAGTTTAATCGCTGTGGATTATACTGATTAATGGGTGTTTTTTGGTTCAATGCATATTTAAAAGGGTTGTTGTTGATGTTGTTGTTGTTGCTCTGTTTCTGCCTCTCCAGTTATACTCTTGGTGGGTTTTTTCTTGCGAACTATGATGATAGTCCAGCAGGAAGTTTTGATGAGGTATGGATTTTGGCTCCCTTTTTTTTTTTTGTCTTTGAAGCTAAACAATGGAGATTTGGTGATGAACCCATGTTTTGGTTGATTTTGATATGGCAGCTTGTGGTAATTGCTGGAATTGTTTGGAATCGTCCAACATCCTGCGCGTATGCTTTTCTATTACCCTTTTTGAAAGAGATGGCTAGATTGTTGAGGCTTACCTGGTTTTGTTTTTCTGAAAGCAGATGGGCAGCTAAGGTTCTAGTGAACAGTGATGAAGCTTGTGATCATGGACGAAAGGTATGGGATTTGAAGGATTGTTGTTGATTTCTGAGGCTTGATTTGTATGGTTGTTTGTGAACTTGTTTGAAGACTATGAATCTGTGTTGTAGGACTCTTCTATGACTGAATTTTCTGGTTTTCTTTACTCGTATAATATGAAGGGAGGGCATATATCAGAGCCCATTAGAAAGGGTACTTATAATGTATTGCTTCACCCAAGACACTCCTTTTCTCAGTGTTCCAACCCTCTCTTACTGTAACATCTCGTACGTGAGATCTCAAATTGGTTGGGGAGAAGAATGAAACATTCTTTATAAGAATGTAGAAACCTCTCCCTAGCAGACATGTTTTAAAACCTCGAGGGGAAGTCCAGAAGGGAAAGCCCAAAGAGGACAATATCTGATTGCGGTGGACTTGAGTTGTTACAATGGTATTAGAACTTGACACCGAGTGATGTGCTAGCGAGGAAGTTGAGCCCTGAAGGTGGCGTGGACACCAAGCAGTGTGTTAGCAAGGACGCAGAAACTCGAATGAGGTGAATTAAAGGGTTCCATATCGATTGGAGAGAGAACGAGTGCCAGTAAGGACGCTAGGCCCTGAAGGGGGGGTGGATTGTGAGATCCCACATCGATTGGGGAAGATAACGAAACATTTTTTACAAGAGTGTGAAAATAACTTCTTAGTAGACGCGTTTTAAAACTTTGCAGGAAAAATCTGAAGAGGGCCATATCTGCTAGGAGTGGGATTGGGCTATTAGATTTAGGTGATATGTGAAATTGAGTACCCATATTGAGTGATTTAAACAAGTGTTTTTAAGCAATTAGTCATATTCCACACAGGACCTTAATTGTCTTAGTTCTAACTTGCCAAGGTGGGATCTAACTGATAACCCAGCCCCTAGAAGAGGATCTTGATAGCAAAGCGGTGGGCAACTTGGTTAAGCAGTCCAGCACCATCAGCATAGTGTCCATTCTCTTTCATTTAGGTCTTCCTTCAATGAAATTCAATCCATTCCCTGTTGGAGTTTGAGTGTCCTATGAGTTTAGTATCCATTTTGATCTTTGGTAATGGATGATGTTTCAATTGCATTCTCTCTCTCTTGCAGGAAGTGGGGCTTCCAAGTCAGGTTGCAAGGTTTACAAAAGTAAGCTACAGTTCTGTATCTTATGGTTTTTCAATATGGAATTCATGGATACATGTTTGTTCCATGTTATCATCCGACCTCCAAACTTTAACACACTGCAACAGCCAATGAGCAATATCGACTCGTAATGTATTGAATGGAAATGGTTTCTATCATGAAAACAGAGGACCGAGGCAGTTCCGAAGCATCGGGGTGAAAGAGGACTTCTCAACTCCTTTCGTGGAAGTAGTGATTTCTGCAACCAGAAGAATCAGGAGCATGTTCAAGTGACTGAAGTGAAGAATCCTACTTCAATAGATGTCTGCAATATCAACCTTTCAATTTCTGGTGAGCTGCTAATTATGGAATCAATATTGCCTTATACTTCTTTTGAAAGAGAAAAATAGTCCTGCTCATCTCATCCACAACACGTATGTTCGTTTTGGAAACACGTCTTCCTATTCTATCTTTTCTCGAATCTCCTGCTAGGCCCGGGAATGGCTGCTATGCTCCTCTACTGCGACCTGAATTTGATTCCGACGGATGGCCTAGAAGCGACCTTTTGGATTAGAAACATGACCTCTAAGACCCGATCCTGTGTTGATCGAAGAGCGGTAGTACGAAGGGGGAATTGACCCAAAAATTGGATAAGGATCAAGATGCAGTCAGGCATCAACGGCTGACTCAAGTGCACCCTGAACCGCACGAAATGGTCACCTATTACACGGCTCACTAACTTTGTTTGGGGTGGGGTACCTATTGTTGAGGATTGTTGTGGAGGGAGTTGGCTAAGTTAGGGAACAATCCTGAGTTTATAAGTAAGGAATACATCTCCATTGATATGAGGCCTCTTGGTATCAAAGTCATGCCCTTAACTTAGCTATGTCAATAGAATCCTTAAATGTTGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGAACCAAATGTCGAACAAAGGATGTACTTTGTTCGAGGACTCTAGAGAAGGAGTTGAGCCTTGATTAAGGGGAAGTTGTTCGAGTGCTCCATAGGCATCAAGGGAGGCTCTATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGAGGGAGTTGGCTAATTTAGGGAATGATCATGAGTTTATAAGTAAAGAATACATCTCCATTGGTATGAGACATATTGAGGAAGCTCAAAGCAAAATCATAAGAGCTTATGCTCAAAATGGACAAGATCATACCACTCTGGAGATATGTGATCCCAAACCCCTATTATTAGTCGGCGGTTCAGCGCACCCCTGTTGCTTTATACTTCTTTTGAAAGAGAAAAATGGTCCTGCTCATCTCATCCACTGTTCACCAATGCCATCATATCTTTGATGTGTTCCTCACATTTCTTCTGCATTGACTTCATGTTCTTATCATCTGATGGAGACATTCATGGGGTCGGAAACTTTCCACAAAATTATTCTACTAGCTTAACTCTCTTTGTCCCCGAAATATATACTTCTTTCGACCAACTAGTAGCATCGGCCCCACTGCGGACACGTTCATGCGTACGGGTGGACTGTCGAGTCTTTCTCAGTCGTTTATGAACTTTTCTTTTCCTGGTTCCAATATTCAAGGAGTAGTGTAGTACTCGTACTTGGATTGTTCTGTTCAAATAGAATGTCCCTTATGTTTCTGATAACAAGTTGATGTTAGCAGATCCTTTAAGCAAATGGATGGGGCCAGCTATCAGAATGTCTCTCCCAAGTTACAGGTAATGTATCTACCAGTTTACAAATGTTTGTGTTTGCCAAATTCACACTTCAAGGCTTACGACAGTTTCATTGTTCTAAAATATCAGTGGGCACACAGAAAATACTCCTGAACTACTCAAATATTCCTGCCAAATTCAATGCCGGTTTGTGTTCCTGTCTTCTGATGTTTAACTATTTGGTTCGTTTGGTGGTGGGTTTATTTGAATTCGAGTACTCGAATATCATTTTCATTTAGGGTGCGAGCAGTAAAGCCAGCAGCGGTCGCAATCGAACAAGCTGGAGAAGATGAACAACATGAACATGAACAAAGCCTCAGCACAACTGTACTGTTATCAAAGCCCATCCTGGCTTTAGAGTTTAGCTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAATATTTTAAACACTCTCTTAGAACACCATGA

mRNA sequence

ATGTTGCTCAAAATGCTGCCACGTGTATCACCTTTTTTCATTGAAATCCGCCATCCATTGCCACCTCGACATCTTATCCTTCAAATTGGATATCCATTCCCCCTCTTCCTCTTCCAACGAACACGCCGAAAAGACCTCCATGGAAAATGGAGAGAAGAAACGCTCAACGGGTTACGGCAGGCCGCCATGGACATTCAGAGGAAGGCTAAAACTGCTCGAAAGTGTATTCCAAAGGAGTTGAGACTCGTTGAAGCATTTGGTTATACTCTTGGTGGGTTTTTTCTTGCGAACTATGATGATAGTCCAGCAGGAAGTTTTGATGAGCTTGTGGTAATTGCTGGAATTGTTTGGAATCGTCCAACATCCTGCGCGTATGCTTTTCTATTACCCTTTTTGAAAGAGATGGCTAGATTGTTGAGGCTTACCTGGTTTTGTTTTTCTGAAAGCAGATGGGCAGCTAAGGTTCTAGTGAACAGTGATGAAGCTTGTGATCATGGACGAAAGGAAGTGGGGCTTCCAAGTCAGGTTGCAAGGTTTACAAAAAGGACCGAGGCAGTTCCGAAGCATCGGGGTGAAAGAGGACTTCTCAACTCCTTTCGTGGAAGTAGTGATTTCTGCAACCAGAAGAATCAGGAGCATGTTCAAGTGACTGAAGTGAAGAATCCTACTTCAATAGATGTCTGCAATATCAACCTTTCAATTTCTGATCCTTTAAGCAAATGGATGGGGCCAGCTATCAGAATGTCTCTCCCAAGTTACAGGGTGCGAGCAGTAAAGCCAGCAGCGGTCGCAATCGAACAAGCTGGAGAAGATGAACAACATGAACATGAACAAAGCCTCAGCACAACTGTACTGTTATCAAAGCCCATCCTGGCTTTAGAGTTTAGCTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAATATTTTAAACACTCTCTTAGAACACCATGA

Coding sequence (CDS)

ATGTTGCTCAAAATGCTGCCACGTGTATCACCTTTTTTCATTGAAATCCGCCATCCATTGCCACCTCGACATCTTATCCTTCAAATTGGATATCCATTCCCCCTCTTCCTCTTCCAACGAACACGCCGAAAAGACCTCCATGGAAAATGGAGAGAAGAAACGCTCAACGGGTTACGGCAGGCCGCCATGGACATTCAGAGGAAGGCTAAAACTGCTCGAAAGTGTATTCCAAAGGAGTTGAGACTCGTTGAAGCATTTGGTTATACTCTTGGTGGGTTTTTTCTTGCGAACTATGATGATAGTCCAGCAGGAAGTTTTGATGAGCTTGTGGTAATTGCTGGAATTGTTTGGAATCGTCCAACATCCTGCGCGTATGCTTTTCTATTACCCTTTTTGAAAGAGATGGCTAGATTGTTGAGGCTTACCTGGTTTTGTTTTTCTGAAAGCAGATGGGCAGCTAAGGTTCTAGTGAACAGTGATGAAGCTTGTGATCATGGACGAAAGGAAGTGGGGCTTCCAAGTCAGGTTGCAAGGTTTACAAAAAGGACCGAGGCAGTTCCGAAGCATCGGGGTGAAAGAGGACTTCTCAACTCCTTTCGTGGAAGTAGTGATTTCTGCAACCAGAAGAATCAGGAGCATGTTCAAGTGACTGAAGTGAAGAATCCTACTTCAATAGATGTCTGCAATATCAACCTTTCAATTTCTGATCCTTTAAGCAAATGGATGGGGCCAGCTATCAGAATGTCTCTCCCAAGTTACAGGGTGCGAGCAGTAAAGCCAGCAGCGGTCGCAATCGAACAAGCTGGAGAAGATGAACAACATGAACATGAACAAAGCCTCAGCACAACTGTACTGTTATCAAAGCCCATCCTGGCTTTAGAGTTTAGCTGCATGGAAATGCAAGTCCAAGCTCCCACTGTTGTTTCTCAATATTTTAAACACTCTCTTAGAACACCATGA

Protein sequence

MLLKMLPRVSPFFIEIRHPLPPRHLILQIGYPFPLFLFQRTRRKDLHGKWREETLNGLRQAAMDIQRKAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAFLLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVPKHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIRMSLPSYRVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP

Homology

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BLAST of Carg06553 vs. NCBI nr
Match: XP_022956122.1 (protein NEOXANTHIN-DEFICIENT 1 [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 2.0e-117
Identity = 226/271 (83.39%), Postives = 226/271 (83.39%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA   
Sbjct: 31  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP
Sbjct: 91  -----------------------WAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 150

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR
Sbjct: 151 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 210

Query: 248 MSLPSY-------------------RVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLSK 307
           MSLPSY                   RVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLSK
Sbjct: 211 MSLPSYSGHTENTPELLKYSCQIQCRVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLSK 270

Query: 308 PILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
           PILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 271 PILALEFSCMEMQVQAPTVVSQYFKHSLRTP 275

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BLAST of Carg06553 vs. NCBI nr
Match: XP_022980792.1 (protein NEOXANTHIN-DEFICIENT 1 [Cucurbita maxima])

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 220/271 (81.18%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KAKTARKCIPKELRLVE FGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA   
Sbjct: 31  KAKTARKCIPKELRLVEVFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNSDEACDHGRKEVGLPSQVARFTKR EAVP
Sbjct: 91  -----------------------WAAKVLVNSDEACDHGRKEVGLPSQVARFTKRIEAVP 150

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           KHR ERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSIS PLSKWMGPAIR
Sbjct: 151 KHRSERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISVPLSKWMGPAIR 210

Query: 248 MSLPSY-------------------RVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLSK 307
           MSLPSY                   RVRAVKPAAV IE+AGEDEQHEHEQSLSTTVLLSK
Sbjct: 211 MSLPSYSGHTENTPELLKYSCQIQCRVRAVKPAAVTIERAGEDEQHEHEQSLSTTVLLSK 270

Query: 308 PILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
           PILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 271 PILALEFSCMEMQVQAPTVVSQYFKHSLRTP 275

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BLAST of Carg06553 vs. NCBI nr
Match: XP_023528318.1 (protein NEOXANTHIN-DEFICIENT 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109
Identity = 215/271 (79.34%), Postives = 219/271 (80.81%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA   
Sbjct: 31  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNSDEACDHGRKEVGLPSQVARF KR EAVP
Sbjct: 91  -----------------------WAAKVLVNSDEACDHGRKEVGLPSQVARFAKRIEAVP 150

Query: 188 -KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAI 247
            KHR ERGL+NSFRGSSDFCNQKNQEHVQVTEVK+PTSIDVCNINLSIS P SKWMGPAI
Sbjct: 151 KKHRSERGLINSFRGSSDFCNQKNQEHVQVTEVKDPTSIDVCNINLSISVPSSKWMGPAI 210

Query: 248 RMSLPSY-------------------RVRAVKPAAVAIEQAGEDEQHEHEQSLSTTVLLS 307
           +MSLPSY                   RVRAVKPA VAIE+AGEDEQHEHEQSLSTTVLLS
Sbjct: 211 KMSLPSYSGHTENTPELLKYSCQIQCRVRAVKPAVVAIERAGEDEQHEHEQSLSTTVLLS 270

Query: 308 KPILALEFSCMEMQVQAPTVVSQYFKHSLRT 319
           KPILALEFSCMEMQVQAPTVVSQYFKHSLRT
Sbjct: 271 KPILALEFSCMEMQVQAPTVVSQYFKHSLRT 275

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BLAST of Carg06553 vs. NCBI nr
Match: XP_004152157.1 (PREDICTED: uncharacterized protein LOC101204328 isoform X2 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 4.1e-94
Identity = 193/284 (67.96%), Postives = 207/284 (72.89%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR CIPKELRLVEAFGYTLGGFFLANYDDSPAG+FDELVVI+GIVWNRPTSCA   
Sbjct: 32  KATTARACIPKELRLVEAFGYTLGGFFLANYDDSPAGTFDELVVISGIVWNRPTSCA--- 91

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNS EACDHGRKEVGLPSQVARFTKR EAVP
Sbjct: 92  -----------------------WAAKVLVNSAEACDHGRKEVGLPSQVARFTKRIEAVP 151

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           KH+ E+GLL+  RG+S+F NQKNQEHVQV EVK PTS+DVCNINLS S P SKWMGPAI+
Sbjct: 152 KHQSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIK 211

Query: 248 MSLPSY-------------------RVRAVKPAAV---AIEQAGEDEQH----------E 307
           MSLPSY                   RVRAVKPA V   A+ +A + + H          E
Sbjct: 212 MSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHITRTGEYGE 271

Query: 308 HEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
           HEQSL T+VLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 272 HEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 289

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BLAST of Carg06553 vs. NCBI nr
Match: XP_011653014.1 (PREDICTED: uncharacterized protein LOC101204328 isoform X1 [Cucumis sativus] >KGN52976.1 hypothetical protein Csa_4G008790 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 4.1e-94
Identity = 193/284 (67.96%), Postives = 207/284 (72.89%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR CIPKELRLVEAFGYTLGGFFLANYDDSPAG+FDELVVI+GIVWNRPTSCA   
Sbjct: 49  KATTARACIPKELRLVEAFGYTLGGFFLANYDDSPAGTFDELVVISGIVWNRPTSCA--- 108

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNS EACDHGRKEVGLPSQVARFTKR EAVP
Sbjct: 109 -----------------------WAAKVLVNSAEACDHGRKEVGLPSQVARFTKRIEAVP 168

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           KH+ E+GLL+  RG+S+F NQKNQEHVQV EVK PTS+DVCNINLS S P SKWMGPAI+
Sbjct: 169 KHQSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIK 228

Query: 248 MSLPSY-------------------RVRAVKPAAV---AIEQAGEDEQH----------E 307
           MSLPSY                   RVRAVKPA V   A+ +A + + H          E
Sbjct: 229 MSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHITRTGEYGE 288

Query: 308 HEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
           HEQSL T+VLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 289 HEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 306

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BLAST of Carg06553 vs. TAIR10
Match: AT1G28100.4 (unknown protein)

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-59
Identity = 138/282 (48.94%), Postives = 169/282 (59.93%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR  IPKE RLVEAFGYTLGGFFLA+YDDSPAG FDELVVIAGIVWN PTSCA   
Sbjct: 31  KAATARAFIPKEFRLVEAFGYTLGGFFLASYDDSPAGVFDELVVIAGIVWNPPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTE--- 187
                                  WAA+VLVNSDEAC HGRKEVGLPSQVARF+K ++   
Sbjct: 91  -----------------------WAARVLVNSDEACHHGRKEVGLPSQVARFSKVSDTLF 150

Query: 188 -----AVPKHRGER--GLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINL-SISD 247
                AVPK + +R  G L++F   +   + +N   V+V+EV +  S D+CNI + S   
Sbjct: 151 LKNITAVPKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDET 210

Query: 248 PLSKWMGPAIRMSLPSY-------------------RVRAVKPAAV--AIEQAGE----- 307
            +  WMGPAI+M+LPS+                   RVR V+PA V  A+E   E     
Sbjct: 211 KVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQ 270

Query: 308 ----DEQHEHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVV 309
                E  E+E+ LS  V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 271 NHTSQESLENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 286

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BLAST of Carg06553 vs. Swiss-Prot
Match: sp|Q8GWB2|NDX1_ARATH (Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=NDX1 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.5e-60
Identity = 138/274 (50.36%), Postives = 167/274 (60.95%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR  IPKE RLVEAFGYTLGGFFLA+YDDSPAG FDELVVIAGIVWN PTSCA   
Sbjct: 31  KAATARAFIPKEFRLVEAFGYTLGGFFLASYDDSPAGVFDELVVIAGIVWNPPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAA+VLVNSDEAC HGRKEVGLPSQVARF+K   AVP
Sbjct: 91  -----------------------WAARVLVNSDEACHHGRKEVGLPSQVARFSKNITAVP 150

Query: 188 KHRGER--GLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINL-SISDPLSKWMGP 247
           K + +R  G L++F   +   + +N   V+V+EV +  S D+CNI + S    +  WMGP
Sbjct: 151 KQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQIRSDETKVGNWMGP 210

Query: 248 AIRMSLPSY-------------------RVRAVKPAAV--AIEQAGE---------DEQH 307
           AI+M+LPS+                   RVR V+PA V  A+E   E          E  
Sbjct: 211 AIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGALEDETEKFTEQNHTSQESL 270

Query: 308 EHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVV 309
           E+E+ LS  V+LSKPI+AL+F C+ MQV+AP V+
Sbjct: 271 ENERQLSKAVMLSKPIIALQFKCLTMQVEAPVVI 278

[Close]

BLAST of Carg06553 vs. Swiss-Prot
Match: sp|K4DEY3|NDX1_SOLLC (Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum OX=4081 GN=NXD1 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 9.1e-53
Identity = 133/285 (46.67%), Postives = 168/285 (58.95%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA+ AR  IPKE +LVEAFGYTLGGFFLA+YDDSPAG FDELVVIAG+VWN PTSCA   
Sbjct: 32  KAENARAFIPKECKLVEAFGYTLGGFFLASYDDSPAGIFDELVVIAGLVWNPPTSCA--- 91

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAA+VLV SDEAC HGRK VGLPSQVARF+K+  A+P
Sbjct: 92  -----------------------WAARVLVGSDEACLHGRKVVGLPSQVARFSKKITALP 151

Query: 188 KHRGERGLLNSFR---GSSDFCNQKNQEHVQVTEVKNPTSIDVCNINL--SISDPLSK-W 247
           +    +   +SF    G     N KN   V+VTE+K  T++ +CNIN+  + S   SK W
Sbjct: 152 QKPESKS--SSFLRRIGLRTSSNYKNHMDVEVTEIKKQTAMSICNINVNATASQQDSKGW 211

Query: 248 MGPAIRMSLPSY-------------------RVRAVKPAAVA--------IEQAGEDEQH 307
           MGP I+MSLP++                   RVRAV+PA V+         E + ED+  
Sbjct: 212 MGPLIKMSLPNFSGRTKYNSDLLKYSCQIECRVRAVQPAKVSGPSESDADKENSSEDQSS 271

Query: 308 EHE----------QSLSTTVLLSKPILALEFSCMEMQVQAPTVVS 310
             E          ++ S +V+LSKPILALEF+ ++M+V+APT V+
Sbjct: 272 NVESVSRVPRGTKRNFSISVMLSKPILALEFNHLKMRVEAPTTVT 288

[Close]

BLAST of Carg06553 vs. Swiss-Prot
Match: sp|Q0IWM5|NDX1_ORYSJ (Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NDX1 PE=3 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-49
Identity = 129/285 (45.26%), Postives = 154/285 (54.04%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR  +P+ELRLVEAFGYTLGG FLA YDDSPAG FDELVVIAGIVWN PTSCA   
Sbjct: 36  KAATARAFVPRELRLVEAFGYTLGGMFLARYDDSPAGKFDELVVIAGIVWNPPTSCA--- 95

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAA+VLVNS EAC HGRKEVGLPS VA F+ +TEA  
Sbjct: 96  -----------------------WAARVLVNSAEACRHGRKEVGLPSHVATFS-QTEADA 155

Query: 188 KHRGERGLLNSFRG----SSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSIS-DPLSKWM 247
                    NSF       S   NQ N   ++++E K   +  +CNI++ ++     KWM
Sbjct: 156 LRNKPLVKSNSFLSLLGMRSTVSNQGNDREIEISETKGSCTRHLCNISVPLTGSHKHKWM 215

Query: 248 GPAIRMSLPSY-------------------RVRAVKPAAV--------------AIEQAG 307
           GPAIRMSLPS+                   RVR V+PA +               I   G
Sbjct: 216 GPAIRMSLPSFSGQIEDHPDLLKYSCQVECRVRPVRPAKIWRPRITEPQECPDGKISSKG 275

Query: 308 EDEQHEHE-QSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFK 314
            +   E + Q  +  VLLSKPILALEF+ +EM V AP +V  + K
Sbjct: 276 SEVLAEPDAQKHTVMVLLSKPILALEFNSLEMHVDAPKIVIPHSK 293

[Close]

BLAST of Carg06553 vs. TrEMBL
Match: tr|A0A0A0KYQ3|A0A0A0KYQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008790 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.7e-94
Identity = 193/284 (67.96%), Postives = 207/284 (72.89%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR CIPKELRLVEAFGYTLGGFFLANYDDSPAG+FDELVVI+GIVWNRPTSCA   
Sbjct: 49  KATTARACIPKELRLVEAFGYTLGGFFLANYDDSPAGTFDELVVISGIVWNRPTSCA--- 108

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNS EACDHGRKEVGLPSQVARFTKR EAVP
Sbjct: 109 -----------------------WAAKVLVNSAEACDHGRKEVGLPSQVARFTKRIEAVP 168

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           KH+ E+GLL+  RG+S+F NQKNQEHVQV EVK PTS+DVCNINLS S P SKWMGPAI+
Sbjct: 169 KHQSEKGLLSFLRGNSNFHNQKNQEHVQVAEVKGPTSMDVCNINLSFSVPFSKWMGPAIK 228

Query: 248 MSLPSY-------------------RVRAVKPAAV---AIEQAGEDEQH----------E 307
           MSLPSY                   RVRAVKPA V   A+ +A + + H          E
Sbjct: 229 MSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHITRTGEYGE 288

Query: 308 HEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
           HEQSL T+VLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP
Sbjct: 289 HEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 306

[Close]

BLAST of Carg06553 vs. TrEMBL
Match: tr|A0A1S3BZ40|A0A1S3BZ40_CUCME (protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo OX=3656 GN=LOC103494625 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 193/286 (67.48%), Postives = 203/286 (70.98%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA TAR CIPKELRLVEAFGYTLGGFFLANYDDSPAG+FDELVVI+GIVWNRPTSCA   
Sbjct: 32  KAGTARACIPKELRLVEAFGYTLGGFFLANYDDSPAGTFDELVVISGIVWNRPTSCA--- 91

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAAKVLVNS EACDHGRKEVGLPS VARFTKR EAVP
Sbjct: 92  -----------------------WAAKVLVNSVEACDHGRKEVGLPSHVARFTKRIEAVP 151

Query: 188 KHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDPLSKWMGPAIR 247
           K + ERGLL+  R +S+F NQKNQEHVQVTEVK PTSIDVCNINLS S P SKWMGPAI+
Sbjct: 152 KRQSERGLLSFLRENSNFHNQKNQEHVQVTEVKGPTSIDVCNINLSFSVPFSKWMGPAIK 211

Query: 248 MSLPSY-------------------RVRAVKPAAVAIE----QAGEDEQH---------- 307
           MSLPSY                   RVRAVKPA V++E       ED  H          
Sbjct: 212 MSLPSYSGHTEYSPELLKYSCQIQCRVRAVKPATVSVELPALNRAEDGDHHSHITRSGED 271

Query: 308 -EHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHSLRTP 320
            EHEQSL T+VLLSKPILALEFSCMEMQVQAPTVVSQYF HSLRTP
Sbjct: 272 GEHEQSLCTSVLLSKPILALEFSCMEMQVQAPTVVSQYFNHSLRTP 291

[Close]

BLAST of Carg06553 vs. TrEMBL
Match: tr|A0A2P5F1X6|A0A2P5F1X6_9ROSA (Acetoacetate decarboxylase beta barrel domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_124010 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 148/281 (52.67%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA+TAR CIPKE RLVEAFGYTLGGFFLANYDDSPAG FDELVVIAG+VWN PTSCA   
Sbjct: 26  KAETARACIPKEFRLVEAFGYTLGGFFLANYDDSPAGVFDELVVIAGLVWNPPTSCA--- 85

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WA KVLVNSDEAC+HGRKEVGLPSQVARF KR  A+P
Sbjct: 86  -----------------------WATKVLVNSDEACEHGRKEVGLPSQVARFKKRITAIP 145

Query: 188 KHRGER--GLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDP---LSKWM 247
           + +     G LN     +   N +++  VQVTEVK+P+  D C+ NL+   P   L KWM
Sbjct: 146 RRKSSESIGFLNMIGMGTTLSNSRDRMDVQVTEVKSPSVEDSCSFNLTTLVPALSLDKWM 205

Query: 248 GPAIRMSLPSY-------------------RVRAVKPAAVA----IEQAGEDEQHEHEQS 307
           GP I+MSLPS+                   RVRAV PA V+    +EQ    E ++ ++S
Sbjct: 206 GPTIKMSLPSFSGRTEHSPDLLKYSCKIQCRVRAVHPAKVSGNSELEQC--SELNKCDES 265

Query: 308 LSTTVLLSKPILALEFSCMEMQVQAPTVVS--QYFKHSLRT 319
            S  V+LSKPI AL+FSCM MQV+AP VVS      +SLRT
Sbjct: 266 TSAAVMLSKPIFALKFSCMTMQVEAPVVVSDCSSSNNSLRT 278

[Close]

BLAST of Carg06553 vs. TrEMBL
Match: tr|A0A2P4JKX2|A0A2P4JKX2_QUESU (Protein neoxanthin-deficient 1 OS=Quercus suber OX=58331 GN=CFP56_15895 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 146/292 (50.00%), Postives = 177/292 (60.62%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA+TAR CIPKE RLVEAFGYTLGGFFLA+YDDSPAG FDELVVIAG+VWN PTSCA   
Sbjct: 202 KAETARACIPKEFRLVEAFGYTLGGFFLASYDDSPAGIFDELVVIAGLVWNPPTSCA--- 261

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAV- 187
                                  WAAKVLVNS+ ACDHGRKEVGLPSQVARF+KR  A+ 
Sbjct: 262 -----------------------WAAKVLVNSNVACDHGRKEVGLPSQVARFSKRITAIT 321

Query: 188 -PKHRGERGLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDP---LSKWM 247
            P    + G LN     + FC+ ++  +VQVTE+K P + D+CNINL+   P     KW 
Sbjct: 322 SPPKSKDMGFLNMVGMGAAFCSPRDHMNVQVTEIKIPDAKDICNINLTSVVPTLDYKKWK 381

Query: 248 GPAIRMSLPSY-------------------RVRAVKPAAVA------------------- 307
           GPAI+MSLPSY                   RVRAV+PA V+                   
Sbjct: 382 GPAIKMSLPSYSGRTEYNPNLLKYSCQIECRVRAVQPAKVSGPTLILNNDRERPTEHGSC 441

Query: 308 -IEQAGEDEQHEHEQSLSTTVLLSKPILALEFSCMEMQVQAPTVVSQYFKHS 316
               +   E  ++ ++LS +V+LSKPILALEFSC++MQV+APTVVS   ++S
Sbjct: 442 NSVDSTTGEHRDNGENLSLSVMLSKPILALEFSCLKMQVEAPTVVSPVSRNS 467

[Close]

BLAST of Carg06553 vs. TrEMBL
Match: tr|A0A0B0NNR7|A0A0B0NNR7_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_17704 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.1e-62
Identity = 144/268 (53.73%), Postives = 172/268 (64.18%), Query Frame = 0


Query: 68  KAKTARKCIPKELRLVEAFGYTLGGFFLANYDDSPAGSFDELVVIAGIVWNRPTSCAYAF 127
           KA+T R  IPKELRLVEAFGYTLGGFFLANYDDSPAG FDELVVIAGIVWN PTSCA   
Sbjct: 31  KAETVRAFIPKELRLVEAFGYTLGGFFLANYDDSPAGVFDELVVIAGIVWNPPTSCA--- 90

Query: 128 LLPFLKEMARLLRLTWFCFSESRWAAKVLVNSDEACDHGRKEVGLPSQVARFTKRTEAVP 187
                                  WAA+VLVNS+EAC HGRKEVGLPSQVARF+KR   VP
Sbjct: 91  -----------------------WAARVLVNSEEACHHGRKEVGLPSQVARFSKRITPVP 150

Query: 188 KHRGER--GLLNSFRGSSDFCNQKNQEHVQVTEVKNPTSIDVCNINLSISDP---LSKWM 247
           + R  +  G L+     +  C+ K+   VQVTEV  P S D+CNI L    P    +KWM
Sbjct: 151 RQRKYKFGGFLSMIGVGTTICHSKDCMDVQVTEVVGPASSDLCNIKLMTDVPTPKFNKWM 210

Query: 248 GPAIRMSLPSYRVRAVKPAAVA------------IEQAG--EDEQHEHEQSLSTTVLLSK 307
           GP+I MSLPS+RVRAV+PA V+             E  G   +E  ++ ++LS +V+LSK
Sbjct: 211 GPSITMSLPSFRVRAVRPAKVSGPSPLKKERSHDSESRGFTAEEVVDNARNLSISVMLSK 270

Query: 308 PILALEFSCMEMQVQAPTVVSQYFKHSL 317
           PILALEF+ +EMQV+AP ++S     SL
Sbjct: 271 PILALEFNFLEMQVEAPIILSNNTTSSL 272

The following BLAST results are available for this feature:

BLAST of Carg06553 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956122.1	2.0e-117	83.39	protein NEOXANTHIN-DEFICIENT 1 [Cucurbita moschata]	[more]
XP_022980792.1	1.4e-113	81.18	protein NEOXANTHIN-DEFICIENT 1 [Cucurbita maxima]	[more]
XP_023528318.1	2.0e-109	79.34	protein NEOXANTHIN-DEFICIENT 1 [Cucurbita pepo subsp. pepo]	[more]
XP_004152157.1	4.1e-94	67.96	PREDICTED: uncharacterized protein LOC101204328 isoform X2 [Cucumis sativus]	[more]
XP_011653014.1	4.1e-94	67.96	PREDICTED: uncharacterized protein LOC101204328 isoform X1 [Cucumis sativus] >KG...	[more]

BLAST of Carg06553 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28100.4	1.8e-59	48.94	unknown protein	[more]

BLAST of Carg06553 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWB2\|NDX1_ARATH	3.5e-60	50.36	Protein NEOXANTHIN-DEFICIENT 1 OS=Arabidopsis thaliana OX=3702 GN=NDX1 PE=2 SV=1	[more]
sp\|K4DEY3\|NDX1_SOLLC	9.1e-53	46.67	Protein NEOXANTHIN-DEFICIENT 1 OS=Solanum lycopersicum OX=4081 GN=NXD1 PE=4 SV=1	[more]
sp\|Q0IWM5\|NDX1_ORYSJ	3.6e-49	45.26	Protein NEOXANTHIN-DEFICIENT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NDX1 ...	[more]

BLAST of Carg06553 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYQ3\|A0A0A0KYQ3_CUCSA	2.7e-94	67.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G008790 PE=4 SV=1	[more]
tr\|A0A1S3BZ40\|A0A1S3BZ40_CUCME	1.1e-92	67.48	protein NEOXANTHIN-DEFICIENT 1 OS=Cucumis melo OX=3656 GN=LOC103494625 PE=4 SV=1	[more]
tr\|A0A2P5F1X6\|A0A2P5F1X6_9ROSA	1.6e-62	52.67	Acetoacetate decarboxylase beta barrel domain containing protein OS=Trema orient...	[more]
tr\|A0A2P4JKX2\|A0A2P4JKX2_QUESU	3.6e-62	50.00	Protein neoxanthin-deficient 1 OS=Quercus suber OX=58331 GN=CFP56_15895 PE=4 SV=...	[more]
tr\|A0A0B0NNR7\|A0A0B0NNR7_GOSAR	6.1e-62	53.73	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_17704 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR039343	NDX1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06553-RA	Carg06553-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039343	Protein NEOXANTHIN-DEFICIENT 1-like	PANTHER	PTHR35467	FAMILY NOT NAMED	coord: 254..314
IPR039343	Protein NEOXANTHIN-DEFICIENT 1-like	PANTHER	PTHR35467	FAMILY NOT NAMED	coord: 68..126
IPR039343	Protein NEOXANTHIN-DEFICIENT 1-like	PANTHER	PTHR35467	FAMILY NOT NAMED	coord: 133..253
None	No IPR available	PANTHER	PTHR35467:SF2	PROTEIN NEOXANTHIN-DEFICIENT 1	coord: 133..253
None	No IPR available	PANTHER	PTHR35467:SF2	PROTEIN NEOXANTHIN-DEFICIENT 1	coord: 68..126
None	No IPR available	PANTHER	PTHR35467:SF2	PROTEIN NEOXANTHIN-DEFICIENT 1	coord: 254..314

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06553	Cla012782	Watermelon (97103) v1	carwmB0120
Carg06553	Csa4G008790	Cucumber (Chinese Long) v2	carcuB0128
Carg06553	MELO3C017808	Melon (DHL92) v3.5.1	carmeB0127
Carg06553	ClCG07G011870	Watermelon (Charleston Gray)	carwcgB0121
Carg06553	CSPI04G02440	Wild cucumber (PI 183967)	carcpiB0133
Carg06553	Cucsa.095670	Cucumber (Gy14) v1	carcgyB0141
Carg06553	CmaCh14G014010	Cucurbita maxima (Rimu)	carcmaB0154
Carg06553	CmoCh14G014380	Cucurbita moschata (Rifu)	carcmoB0163
Carg06553	Lsi07G003810	Bottle gourd (USVL1VR-Ls)	carlsiB109
Carg06553	Cp4.1LG03g13330	Cucurbita pepo (Zucchini)	carcpeB0176
Carg06553	CsGy4G002320	Cucumber (Gy14) v2	carcgybB0127
Carg06553	MELO3C017808.2	Melon (DHL92) v3.6.1	carmedB0131
Carg06553	CsaV3_4G002340	Cucumber (Chinese Long) v3	carcucB0137
Carg06553	Cla97C07G138580	Watermelon (97103) v2	carwmbB0126
Carg06553	Bhi01G002909	Wax gourd	carwgoB0143

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06553	Silver-seed gourd	carcarB142
Carg06553	Cucurbita maxima (Rimu)	carcmaB0158
Carg06553	Cucurbita moschata (Rifu)	carcmoB0167
Carg06553	Cucurbita pepo (Zucchini)	carcpeB0178
Carg06553	Wax gourd	carwgoB0139