Carg06544 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTCAGCTTTCGAGGTCTGTAGAGCGTAACGCAACGCCGAAGGAGAAGTCGGAATGGACGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAAAAGGAGTTCAAGGAGTGTGTGGAAGAACCAAATGGTTCTCTGACGCCTGTGATTGATGATAGCTTGGAGAGCAATGAGCTTGAGAAACAGAAGCTCGCGATCATGAGAGCTTTTGTTGAAGGAGAAGACTCCTCTGCTAAGGTTACTTACTTCTTTTTAGTTTACTCGTATGAATAAGATCGAGAAAACTTCGCTTTCCTGCGTTTCTTTTGTTGCGATTGATGCTTTGTCATTGAGAATCAGTTGCTTTTGCTGCTTTTGAAAATTTTGGTTCTTAAGATCTGGAGGATTGTTTTTCTCGAGAAATTTTTTACTACATCTTGTATACAGTGGTCGGATTCGATCTTGTCTGTTTTCCTGTTATTCTACATTGATTTTGCTCATCAGGTCCCCGTCCAACCTTTCCACTGGATCAATATTTTTGCGCTCATGTATTCGTCAAATCTGCAACTCATGCTATTGCATCGTTAGAAGTATTTTTTAAATCATGAGGTTGAATCCTCCTTTTATTCTTCAATTAATTTGGCCATTGTCTTTACTAGAATCGGCCCACAGATATGAATCACAAGAGTTTTTAAAACTATTTTCGGAACACATAGATATAGTTGCAGATTTAGCGAACTAACCATATTTTAAAAATATCCAAACATTAAGCAAGAGCAATTAGCATAAAAGAATCCTGTGAAATGGAAACTGTTGCGAGCAATTCATTTGTAGGAATATTTGTTATGAGAATTGAGAGGGTAAATTTTACCAGATGCATACCACCTAAAATAACAAGCCATTTGTTTTTGGCATTGAAGAACATGTAAGGATAATCGAATGAATTGCAATTGTCGCTGGTTTCAAGCTGCACGGTGGATGAGTATTTGCTACTGTTGTTTTTTACTATTTACTATAACTTAAGAACAGTTTGTGCATGCGAATAACCTTTGATGATTTTGTTATTTAAGGATGTTGGACATTGTGCATCATGTTTGCAGGATGTAGATGATTTCATGCTACGAAGGTTTTTACGAGCTCGTGATTTAGATATAGAGAAGGCTTCTGCCATGTTTCTGAAGTACTTGAGCTGGAGAAGATCAGCTATTCCTGACGGATTTATATCAGTGTCTGAGCTATCAACCAATCTCGCTCACAACAAGTTGTTCATGCAAGGTGTTGATAAGAAGGGACGTCCAATTGTAGTTGGCTTTGGTAACAGGCACAAACAAGGAAATTTAGAAGAGTTTATTCGTATGTTATGAATCTGAACTCATGTGATGTGAATCCAAATTTGATGATGTTTATTTCATTTAAAATCACAGATGAGGGTTCTCAGTTCATCTTCTTAACCTTTTGCAGGTTTCGTAATCTTTGCTTTAGATAAAATATGTTCCAGGTAATTTATGCTCCTCTATCACTTCAGTTGCCTGCATTTTAGTTGGTTCCAATGGAAAATAGTACCTTGAAGTAACTTGAGGGGAAATCTTGAAGAAGCTCAAGTCTTCATTCACCATGATTATCCCCTAACTTATTCTAACAACATAGATTCCAGAGTCAATGACGAATTATTGTTATTTTTCTTTCACTTTGTGAGAAAAAAAGGTTGAAAATAATTTATGGCAGATTTGTTCTATCTTTCAGGATTCCAAGAGGGCAGGAAAAGTTTGTGTGTATTGGTGACCTTCAGGGATGGGGATACTCTAATAGCGATATTCGTGGATATCGAGCAGCTCTATCAATCTTGCAGGTTTAACATTTGAACATTCGAGGAATCCTTTACAGAATAGTAGTGGTTCACTGTTAGCAAGTGTGAGATCTCACATCGGTTGGAGAGGAGAACGAAACATATTTTATAAGGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACTTTGAGGGGAAGCACGAAAAAGAAAGCCCAAACAGGACAATATCTATTAGTAGTAGACTGGATAGACTTGAGCTGTTACAAAGTATTAGGGCTAGATACCGAGCGATGCCAATAAAGAGGTTGAGCCCCGAAGGGGGTGGATACAAGTCGGTGTGCGAGCAAGGACACTAGCCCCGAAGGTAGGTGGATTGGTGGTCTCACATCGATTGGAGAAGAGAACGTGTGTCAGCGAGGACGCTAGGCCTCGAAGGGGGGTGGATTGTTATATCTCACATAAGTTGTGGGGGAGACGAAACATTCTTTAGAAGCATGTGGAAACATCTCTATAGCAGACATGTTTTAAAAACCTTGAGGGGAAGTCCAAAAGAAAAAACTCAAAAAAGACAATATCTGCTAGCGTTGGACTTGAACGATTACCGTAAGATTATAGAATTAGAATTGCATACCAATTAGTATAACAGTAGTTTGATTGTTTTGATCACAGGACTACTACCCAGAGAGACTGGGCAAGCTATACATTGTCCACGTCCCTTACATATTCATGACAGCATGGAAGATGGTTTACCCATTTATTGACAAGAAAACCAAGAACAAGGTTAAATTTCTATAGCATTTCTATTGAAACAGATTCTTGTGTGCATAAGTGGGGACATCATTTACTATCAATTCTTTGACTGTGGTTAAAAGTAGTTTTACTAATTACTCAAAACTACACTTTTGTCATACTGCATGTTTGCAGATAAGCTTTGTGGAGGACAAAAAGCTGAATTCCACGCTGCTTGACGACATTGATGAGAGCCAGCTCCCTGATGCGTATGGGGGCAAACTTTCGTTAGTTCCAATCCAAGACTGCTAAATCTCTTCAGAGATGTTATCTTAAATATCCATCACACGGTTAATACTCATACCCCTCCTCTTCTCGCTCTACCTTTCTTTTACTGGTTTTCTAGTTGCTGGTAACGCAATATTCAATAAGGTTAGTGGTATAAGCTTTTACAGGGAAATAACTCTCTTAGAGAAGTTCGATTGTAGAAATCAGACTCCTCCTACCCATGTTACTGAATTAGAGGATTACTTTATCTTCATGTTCTAGAAGATTACTTATCTTCATGTTCTTACGAATTATGGTCAAAATATAGCTTGGTTTCC ATGGCGACTCAGCTTTCGAGGTCTGTAGAGCGTAACGCAACGCCGAAGGAGAAGTCGGAATGGACGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAAAAGGAGTTCAAGGAGTGTGTGGAAGAACCAAATGGTTCTCTGACGCCTGTGATTGATGATAGCTTGGAGAGCAATGAGCTTGAGAAACAGAAGCTCGCGATCATGAGAGCTTTTGTTGAAGGAGAAGACTCCTCTGCTAAGGATGTAGATGATTTCATGCTACGAAGGTTTTTACGAGCTCGTGATTTAGATATAGAGAAGGCTTCTGCCATGTTTCTGAAGTACTTGAGCTGGAGAAGATCAGCTATTCCTGACGGATTTATATCAGTGTCTGAGCTATCAACCAATCTCGCTCACAACAAGTTGTTCATGCAAGGTGTTGATAAGAAGGGACGTCCAATTGTAGTTGGCTTTGGTAACAGGCACAAACAAGGAAATTTAGAAGAGTTTATTCGTTTCGTAATCTTTGCTTTAGATAAAATATGTTCCAGGATTCCAAGAGGGCAGGAAAAGTTTGTGTGTATTGGTGACCTTCAGGGATGGGGATACTCTAATAGCGATATTCGTGGATATCGAGCAGCTCTATCAATCTTGCAGGACTACTACCCAGAGAGACTGGGCAAGCTATACATTGTCCACGTCCCTTACATATTCATGACAGCATGGAAGATGGTTTACCCATTTATTGACAAGAAAACCAAGAACAAGATAAGCTTTGTGGAGGACAAAAAGCTGAATTCCACGCTGCTTGACGACATTGATGAGAGCCAGCTCCCTGATGCGTATGGGGGCAAACTTTCGTTAGTTCCAATCCAAGACTGCTAAATCTCTTCAGAGATGTTATCTTAAATATCCATCACACGGTTAATACTCATACCCCTCCTCTTCTCGCTCTACCTTTCTTTTACTGGTTTTCTAGTTGCTGGTAACGCAATATTCAATAAGGTTAGTGGTATAAGCTTTTACAGGGAAATAACTCTCTTAGAGAAGTTCGATTGTAGAAATCAGACTCCTCCTACCCATGTTACTGAATTAGAGGATTACTTTATCTTCATGTTCTAGAAGATTACTTATCTTCATGTTCTTACGAATTATGGTCAAAATATAGCTTGGTTTCC ATGGCGACTCAGCTTTCGAGGTCTGTAGAGCGTAACGCAACGCCGAAGGAGAAGTCGGAATGGACGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAAAAGGAGTTCAAGGAGTGTGTGGAAGAACCAAATGGTTCTCTGACGCCTGTGATTGATGATAGCTTGGAGAGCAATGAGCTTGAGAAACAGAAGCTCGCGATCATGAGAGCTTTTGTTGAAGGAGAAGACTCCTCTGCTAAGGATGTAGATGATTTCATGCTACGAAGGTTTTTACGAGCTCGTGATTTAGATATAGAGAAGGCTTCTGCCATGTTTCTGAAGTACTTGAGCTGGAGAAGATCAGCTATTCCTGACGGATTTATATCAGTGTCTGAGCTATCAACCAATCTCGCTCACAACAAGTTGTTCATGCAAGGTGTTGATAAGAAGGGACGTCCAATTGTAGTTGGCTTTGGTAACAGGCACAAACAAGGAAATTTAGAAGAGTTTATTCGTTTCGTAATCTTTGCTTTAGATAAAATATGTTCCAGGATTCCAAGAGGGCAGGAAAAGTTTGTGTGTATTGGTGACCTTCAGGGATGGGGATACTCTAATAGCGATATTCGTGGATATCGAGCAGCTCTATCAATCTTGCAGGACTACTACCCAGAGAGACTGGGCAAGCTATACATTGTCCACGTCCCTTACATATTCATGACAGCATGGAAGATGGTTTACCCATTTATTGACAAGAAAACCAAGAACAAGATAAGCTTTGTGGAGGACAAAAAGCTGAATTCCACGCTGCTTGACGACATTGATGAGAGCCAGCTCCCTGATGCGTATGGGGGCAAACTTTCGTTAGTTCCAATCCAAGACTGCTAA MATQLSRSVERNATPKEKSEWTKEEEEEEEEEKEFKECVEEPNGSLTPVIDDSLESNELEKQKLAIMRAFVEGEDSSAKDVDDFMLRRFLRARDLDIEKASAMFLKYLSWRRSAIPDGFISVSELSTNLAHNKLFMQGVDKKGRPIVVGFGNRHKQGNLEEFIRFVIFALDKICSRIPRGQEKFVCIGDLQGWGYSNSDIRGYRAALSILQDYYPERLGKLYIVHVPYIFMTAWKMVYPFIDKKTKNKISFVEDKKLNSTLLDDIDESQLPDAYGGKLSLVPIQDC
BLAST of Carg06544 vs. NCBI nr
Match: XP_022955736.1 (patellin-4-like [Cucurbita moschata]) HSP 1 Score: 526.6 bits (1355), Expect = 5.4e-146 Identity = 280/286 (97.90%), Postives = 281/286 (98.25%), Query Frame = 0
BLAST of Carg06544 vs. NCBI nr
Match: XP_023526485.1 (patellin-4-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 521.2 bits (1341), Expect = 2.3e-144 Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0
BLAST of Carg06544 vs. NCBI nr
Match: XP_022980819.1 (patellin-4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 517.7 bits (1332), Expect = 2.5e-143 Identity = 267/286 (93.36%), Postives = 272/286 (95.10%), Query Frame = 0
BLAST of Carg06544 vs. NCBI nr
Match: XP_023539819.1 (phosphatidylinositol transfer protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 484.2 bits (1245), Expect = 3.1e-133 Identity = 239/286 (83.57%), Postives = 254/286 (88.81%), Query Frame = 0
BLAST of Carg06544 vs. NCBI nr
Match: XP_022932698.1 (phosphatidylinositol transfer protein 3 [Cucurbita moschata]) HSP 1 Score: 479.2 bits (1232), Expect = 9.9e-132 Identity = 237/285 (83.16%), Postives = 252/285 (88.42%), Query Frame = 0
BLAST of Carg06544 vs. TAIR10
Match: AT1G01630.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 336.3 bits (861), Expect = 1.9e-92 Identity = 162/240 (67.50%), Postives = 192/240 (80.00%), Query Frame = 0
BLAST of Carg06544 vs. TAIR10
Match: AT1G14820.3 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-38 Identity = 92/234 (39.32%), Postives = 126/234 (53.85%), Query Frame = 0
BLAST of Carg06544 vs. TAIR10
Match: AT1G22180.2 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 111.3 bits (277), Expect = 9.9e-25 Identity = 66/208 (31.73%), Postives = 113/208 (54.33%), Query Frame = 0
BLAST of Carg06544 vs. TAIR10
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23 Identity = 66/202 (32.67%), Postives = 104/202 (51.49%), Query Frame = 0
BLAST of Carg06544 vs. TAIR10
Match: AT4G08690.2 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23 Identity = 68/239 (28.45%), Postives = 124/239 (51.88%), Query Frame = 0
BLAST of Carg06544 vs. Swiss-Prot
Match: sp|Q55CU8|PITC_DICDI (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.4e-20 Identity = 59/205 (28.78%), Postives = 105/205 (51.22%), Query Frame = 0
BLAST of Carg06544 vs. Swiss-Prot
Match: sp|P24280|SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEC14 PE=1 SV=3) HSP 1 Score: 95.1 bits (235), Expect = 1.3e-18 Identity = 76/247 (30.77%), Postives = 114/247 (46.15%), Query Frame = 0
BLAST of Carg06544 vs. Swiss-Prot
Match: sp|F4JVA9|SFH2_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana OX=3702 GN=SFH2 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.8e-18 Identity = 78/261 (29.89%), Postives = 121/261 (46.36%), Query Frame = 0
BLAST of Carg06544 vs. Swiss-Prot
Match: sp|Q10137|SEC14_SCHPO (Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sec14 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.0e-18 Identity = 77/252 (30.56%), Postives = 118/252 (46.83%), Query Frame = 0
BLAST of Carg06544 vs. Swiss-Prot
Match: sp|Q94C59|PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana OX=3702 GN=PATL4 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 2.5e-17 Identity = 62/212 (29.25%), Postives = 102/212 (48.11%), Query Frame = 0
BLAST of Carg06544 vs. TrEMBL
Match: tr|A0A1S3BXF1|A0A1S3BXF1_CUCME (random slug protein 5 OS=Cucumis melo OX=3656 GN=LOC103494639 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 4.4e-128 Identity = 241/286 (84.27%), Postives = 259/286 (90.56%), Query Frame = 0
BLAST of Carg06544 vs. TrEMBL
Match: tr|A0A0A0KVQ7|A0A0A0KVQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007640 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 4.6e-125 Identity = 238/286 (83.22%), Postives = 259/286 (90.56%), Query Frame = 0
BLAST of Carg06544 vs. TrEMBL
Match: tr|A0A2N9FBF4|A0A2N9FBF4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12212 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 2.1e-101 Identity = 181/231 (78.35%), Postives = 203/231 (87.88%), Query Frame = 0
BLAST of Carg06544 vs. TrEMBL
Match: tr|A0A2P4JYQ9|A0A2P4JYQ9_QUESU (Random slug protein 5 OS=Quercus suber OX=58331 GN=CFP56_18236 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 4.6e-101 Identity = 182/237 (76.79%), Postives = 208/237 (87.76%), Query Frame = 0
BLAST of Carg06544 vs. TrEMBL
Match: tr|M5XM97|M5XM97_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G214400 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 2.5e-99 Identity = 178/234 (76.07%), Postives = 202/234 (86.32%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |