Carg06509 (gene) Silver-seed gourd

Overview
NameCarg06509
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein LURP-one-related like
LocationCucurbita_argyrosperma_scaffold_051 : 932525 .. 933270 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTTCTTCCATTGATGACTCTGAGTTTTCCTGTAATGGAATTGGATCCATTCCCACCACCACCGACACCCACTTCACTGTCATGAAAACGTCTCTCTTCTTCGCCGGCGACGGCTTCACTGTCTATGACTGCAAAGGGAAGCTCGTCTTTCGAGTCGATTCCTATGGCCCTGATGCTCGTTACAGGGATGAACTAGTTCTCATGGACCCTCATGGTCATTGCCTCTTCACAGTCCGCCGCAAGGTAATTTGTGTTTCTTTTTCCTTCATTTAAAGTGGGTTTTGTCTAATTTTGGATTTGGGTTCTTGTTTGTTTGAGTTATTGACTCTGTTTCGTTTTGCTCTGTTTTTTTCCGAAAACAGAGGCCGAGTTTGCATCAACGGTGGGAAGGGTATCTTCGGGAGAGGATCAACGGGCAGAAACCAGTTTTTGGAGTGCGACGGTCGTCGATCATCGGACCGTCGAGTTTGACGGTGGATATGTATGGAAATCCCGGTAAGGAGTATCAGATCGAGGGGTCATTTGGGCAGCGTTTATGCACAGTTTTGAATGTGAAGAAAGAGGCGGTGGCTAAGATTAGAAGGAAAGTTGATGCTTCGACTAATGTGGTGCTTGGAAAAGATGTGTTTTCCCTTTCTTTAAAGCCTGGTTTTGATGGGGCTTTCGCTATGGCTTTGGTGCTTATTCTTGATCAGATAAGCGGTGATGAAGGGATTGGTGGCGAACCAGATCGGACACTA

mRNA sequence

ATGAAGGTTTCTTCCATTGATGACTCTGAGTTTTCCTGTAATGGAATTGGATCCATTCCCACCACCACCGACACCCACTTCACTGTCATGAAAACGTCTCTCTTCTTCGCCGGCGACGGCTTCACTGTCTATGACTGCAAAGGGAAGCTCGTCTTTCGAGTCGATTCCTATGGCCCTGATGCTCGTTACAGGGATGAACTAGTTCTCATGGACCCTCATGGTCATTGCCTCTTCACAGTCCGCCGCAAGAGGCCGAGTTTGCATCAACGGTGGGAAGGGTATCTTCGGGAGAGGATCAACGGGCAGAAACCAGTTTTTGGAGTGCGACGGTCGTCGATCATCGGACCGTCGAGTTTGACGGTGGATATGTATGGAAATCCCGGTAAGGAGTATCAGATCGAGGGGTCATTTGGGCAGCGTTTATGCACAGTTTTGAATGTGAAGAAAGAGGCGGTGGCTAAGATTAGAAGGAAAGTTGATGCTTCGACTAATGTGGTGCTTGGAAAAGATGTGTTTTCCCTTTCTTTAAAGCCTGGTTTTGATGGGGCTTTCGCTATGGCTTTGGTGCTTATTCTTGATCAGATAAGCGGTGATGAAGGGATTGGTGGCGAACCAGATCGGACACTA

Coding sequence (CDS)

ATGAAGGTTTCTTCCATTGATGACTCTGAGTTTTCCTGTAATGGAATTGGATCCATTCCCACCACCACCGACACCCACTTCACTGTCATGAAAACGTCTCTCTTCTTCGCCGGCGACGGCTTCACTGTCTATGACTGCAAAGGGAAGCTCGTCTTTCGAGTCGATTCCTATGGCCCTGATGCTCGTTACAGGGATGAACTAGTTCTCATGGACCCTCATGGTCATTGCCTCTTCACAGTCCGCCGCAAGAGGCCGAGTTTGCATCAACGGTGGGAAGGGTATCTTCGGGAGAGGATCAACGGGCAGAAACCAGTTTTTGGAGTGCGACGGTCGTCGATCATCGGACCGTCGAGTTTGACGGTGGATATGTATGGAAATCCCGGTAAGGAGTATCAGATCGAGGGGTCATTTGGGCAGCGTTTATGCACAGTTTTGAATGTGAAGAAAGAGGCGGTGGCTAAGATTAGAAGGAAAGTTGATGCTTCGACTAATGTGGTGCTTGGAAAAGATGTGTTTTCCCTTTCTTTAAAGCCTGGTTTTGATGGGGCTTTCGCTATGGCTTTGGTGCTTATTCTTGATCAGATAAGCGGTGATGAAGGGATTGGTGGCGAACCAGATCGGACACTA

Protein sequence

MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDEGIGGEPDRTL
Homology
[Close]
BLAST of Carg06509 vs. NCBI nr
Match: XP_023526859.1 (protein LURP-one-related 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.1 bits (1089), Expect = 2.8e-115
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60
           MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD
Sbjct: 1   MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60

Query: 61  ARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120
           ARYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT
Sbjct: 61  ARYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120

Query: 121 VDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF 180
           V+MYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF
Sbjct: 121 VEMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF 180

Query: 181 DGAFAMALVLILDQISGDEGIGGEPDRTL 210
           DGAFAMALVLILDQISGDEGIGGEPDRTL
Sbjct: 181 DGAFAMALVLILDQISGDEGIGGEPDRTL 209

[Close]
BLAST of Carg06509 vs. NCBI nr
Match: XP_022955632.1 (protein LURP-one-related 5-like [Cucurbita moschata])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNGIGSIP---TTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSY 60
           MKVSSIDDSEFSCNGIGSIP   TTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSY
Sbjct: 1   MKVSSIDDSEFSCNGIGSIPTTTTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSY 60

Query: 61  GPDARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPS 120
           GPDARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPS
Sbjct: 61  GPDARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPS 120

Query: 121 SLTVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLK 180
           SLTVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLK
Sbjct: 121 SLTVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLK 180

Query: 181 PGFDGAFAMALVLILDQISGDEGIGGEPDRTL 210
           PGFDGAFAMALVLILDQISGD+GIGGEPDRTL
Sbjct: 181 PGFDGAFAMALVLILDQISGDDGIGGEPDRTL 212

[Close]
BLAST of Carg06509 vs. NCBI nr
Match: XP_022979417.1 (protein LURP-one-related 5-like [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60
           MKVSSIDDSEFSCN IGS P T DTHFTVMKTSLFFAGDGFTVYDC+GKLVFRVDSYGPD
Sbjct: 1   MKVSSIDDSEFSCNRIGSTP-TADTHFTVMKTSLFFAGDGFTVYDCEGKLVFRVDSYGPD 60

Query: 61  ARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120
           ARYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT
Sbjct: 61  ARYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120

Query: 121 VDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF 180
           V+MYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLS+KPGF
Sbjct: 121 VEMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSVKPGF 180

Query: 181 DGAFAMALVLILDQISGDEGIGGEPDRTL 210
           DGAFAMALVLILDQISGDEGIGGEPDRTL
Sbjct: 181 DGAFAMALVLILDQISGDEGIGGEPDRTL 208

[Close]
BLAST of Carg06509 vs. NCBI nr
Match: XP_004152197.1 (PREDICTED: protein LURP-one-related 5 [Cucumis sativus] >KGN52896.1 hypothetical protein Csa_4G005540 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 9.9e-97
Identity = 179/211 (84.83%), Postives = 191/211 (90.52%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60
           MKVSSIDDS FSC G+    TTT THFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD
Sbjct: 1   MKVSSIDDSLFSCKGLVGSSTTTTTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60

Query: 61  ARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120
           +RYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKP+FGVRRSSIIG SS T
Sbjct: 61  SRYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPIFGVRRSSIIGRSSFT 120

Query: 121 VDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF 180
           V+MYGNPG+EYQIEG FGQRLCTVLNVKKE VA IRRKVDASTNV+LGKDVFSLSL PGF
Sbjct: 121 VEMYGNPGEEYQIEGCFGQRLCTVLNVKKEPVATIRRKVDASTNVLLGKDVFSLSLNPGF 180

Query: 181 DGAFAMALVLILDQISGDEGI--GGEPDRTL 210
           DGAFAMALVL+LD+I+G EG+   G P++ L
Sbjct: 181 DGAFAMALVLVLDRING-EGVDSSGNPEQIL 210

[Close]
BLAST of Carg06509 vs. NCBI nr
Match: XP_008454228.1 (PREDICTED: protein LURP-one-related 5 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 2.7e-94
Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNG-IGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP 60
           MKVSSIDDS FSC G +GS       HFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP
Sbjct: 1   MKVSSIDDSLFSCKGLVGSSXXXXXXHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP 60

Query: 61  DARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSL 120
           D+RYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKP+FGVRRSSIIG SS 
Sbjct: 61  DSRYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPIFGVRRSSIIGRSSF 120

Query: 121 TVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPG 180
           TV+MYGNPG+EYQIEG FGQRLCTVLNV+KE VA IRRKVDAST V+LGKDVFSLSL PG
Sbjct: 121 TVEMYGNPGEEYQIEGCFGQRLCTVLNVRKEPVATIRRKVDASTKVLLGKDVFSLSLNPG 180

Query: 181 FDGAFAMALVLILDQISGDEGI--GGEPDRTL 210
           FDGAFAMALVL+LD+I+G EG+   G PD+TL
Sbjct: 181 FDGAFAMALVLVLDRING-EGVDSSGNPDQTL 211

[Close]
BLAST of Carg06509 vs. TAIR10
Match: AT1G80120.1 (Protein of unknown function (DUF567))

HSP 1 Score: 253.8 bits (647), Expect = 9.0e-68
Identity = 128/175 (73.14%), Postives = 148/175 (84.57%), Query Frame = 0 

Query: 28  TVMKTSLFFAGDGFTVYDCKGKLVFRVDSY-GPDARYRDELVLMDPHGHCLFTVRRKRPS 87
           TV KTSLFFAGDGFTVYDCKG LVFRVDSY GP+ R  DE+VLMD HG CL T+RRKRPS
Sbjct: 20  TVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPS 79

Query: 88  LHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGN-PGKEYQIEGSFGQRLCTVL 147
           L +RWEGYL ER +GQKP+FGVRRSSIIG +S+TV++YG+    EY IEGSFG R CTV+
Sbjct: 80  LRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQCSEYLIEGSFGARNCTVV 139

Query: 148 NVK-KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
             + +  VA+IRRKVDASTNV+LGKDVFSL++KPGFDGAFAM LVL+LDQI GD+
Sbjct: 140 EAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQIYGDD 194

[Close]
BLAST of Carg06509 vs. TAIR10
Match: AT3G15810.1 (Protein of unknown function (DUF567))

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-65
Identity = 113/178 (63.48%), Postives = 141/178 (79.21%), Query Frame = 0 

Query: 24  DTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRK 83
           D   TV KTSLF+ GDGF  YDC+G ++FRVDSYGPD R  DE+VLMD  G CL TV+RK
Sbjct: 30  DKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRK 89

Query: 84  RPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCT 143
           RP+LHQRWEG+L ER  GQKP+F VRRSSIIG  ++ V++Y   G+EY I+G F QR C 
Sbjct: 90  RPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYIIDGDFSQRSCL 149

Query: 144 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDEGI 202
           + + KK  VA+I+RKVDASTNV+LG+DVF+L +KPGFDGAFAM LV++LDQI+GD+ +
Sbjct: 150 IYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGDDPV 207

[Close]
BLAST of Carg06509 vs. TAIR10
Match: AT2G38640.1 (Protein of unknown function (DUF567))

HSP 1 Score: 111.3 bits (277), Expect = 7.2e-25
Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 0 

Query: 28  TVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRKRPSL 87
           TV K SL F  DGFTVY+  G+LVFRVD+Y      RD +VLMD  G  L ++RRK+ SL
Sbjct: 26  TVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCP--RDNIVLMDASGFPLLSIRRKKLSL 85

Query: 88  HQRWEGYLRERINGQKPVFGVRRS-SIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCTVLN 147
              W  Y  E    + P+F  R++ SII        +       Y+IEGS+GQR C +L+
Sbjct: 86  GDCWMVYDGE--TERDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQRSCKILD 145

Query: 148 VK--KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQI 196
            +  K+  A+I+RK      V  GKDV+ L ++   +   AMAL +ILDQ+
Sbjct: 146 ERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQM 192

[Close]
BLAST of Carg06509 vs. TAIR10
Match: AT5G41590.1 (Protein of unknown function (DUF567))

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 0 

Query: 25  THFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYR-DELVLMDPHGHCLFTVRR- 84
           T  TV + SL  + +GFTV D  G L++RVD+Y   AR R +EL+LMD  G+ L  + R 
Sbjct: 37  TTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNY---ARTRPEELILMDKDGNSLLLMHRT 96

Query: 85  KRPSLHQRWEGYLRERINGQK-----PVFGVRRSSIIGPSSLTVDMYG-------NPGKE 144
           K+ +L   W  Y      G+      P + +R++  +   S   D+         +    
Sbjct: 97  KKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNS 156

Query: 145 YQIEGSFGQRLCTVLNVK-KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALV 196
           Y I+GS+  + C +++V   + V +I+RK   +  V  G DVF L + PGFD   AMALV
Sbjct: 157 YIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALV 216

[Close]
BLAST of Carg06509 vs. TAIR10
Match: AT3G11740.1 (Protein of unknown function (DUF567))

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16
Identity = 47/176 (26.70%), Postives = 91/176 (51.70%), Query Frame = 0 

Query: 29  VMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRKRPSLH 88
           +++  +      F V D  G L+F+V    P     D+ +L+D +   + T+R  + SLH
Sbjct: 18  IVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLDAYDTPILTLRENKVSLH 77

Query: 89  QRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKE-----YQIEGSFGQRLCT 148
            RW  Y  +  +    ++ ++RSS+I      +D++    KE     + ++GS+  R C 
Sbjct: 78  DRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCV 137

Query: 149 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
           V   K +A+     K   + ++++GK  FS+++ P  D AF ++L++ILD I+ ++
Sbjct: 138 VYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINRED 191

[Close]
BLAST of Carg06509 vs. Swiss-Prot
Match: sp|Q9SSC7|LOR5_ARATH (Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-66
Identity = 128/175 (73.14%), Postives = 148/175 (84.57%), Query Frame = 0 

Query: 28  TVMKTSLFFAGDGFTVYDCKGKLVFRVDSY-GPDARYRDELVLMDPHGHCLFTVRRKRPS 87
           TV KTSLFFAGDGFTVYDCKG LVFRVDSY GP+ R  DE+VLMD HG CL T+RRKRPS
Sbjct: 20  TVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPS 79

Query: 88  LHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGN-PGKEYQIEGSFGQRLCTVL 147
           L +RWEGYL ER +GQKP+FGVRRSSIIG +S+TV++YG+    EY IEGSFG R CTV+
Sbjct: 80  LRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQCSEYLIEGSFGARNCTVV 139

Query: 148 NVK-KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
             + +  VA+IRRKVDASTNV+LGKDVFSL++KPGFDGAFAM LVL+LDQI GD+
Sbjct: 140 EAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQIYGDD 194

[Close]
BLAST of Carg06509 vs. Swiss-Prot
Match: sp|Q9LVZ8|LOR12_ARATH (Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-64
Identity = 113/178 (63.48%), Postives = 141/178 (79.21%), Query Frame = 0 

Query: 24  DTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRK 83
           D   TV KTSLF+ GDGF  YDC+G ++FRVDSYGPD R  DE+VLMD  G CL TV+RK
Sbjct: 30  DKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRK 89

Query: 84  RPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCT 143
           RP+LHQRWEG+L ER  GQKP+F VRRSSIIG  ++ V++Y   G+EY I+G F QR C 
Sbjct: 90  RPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYIIDGDFSQRSCL 149

Query: 144 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDEGI 202
           + + KK  VA+I+RKVDASTNV+LG+DVF+L +KPGFDGAFAM LV++LDQI+GD+ +
Sbjct: 150 IYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGDDPV 207

[Close]
BLAST of Carg06509 vs. Swiss-Prot
Match: sp|Q9ZVI6|LOR8_ARATH (Protein LURP-one-related 8 OS=Arabidopsis thaliana OX=3702 GN=At2g38640 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 0 

Query: 28  TVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRKRPSL 87
           TV K SL F  DGFTVY+  G+LVFRVD+Y      RD +VLMD  G  L ++RRK+ SL
Sbjct: 26  TVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCP--RDNIVLMDASGFPLLSIRRKKLSL 85

Query: 88  HQRWEGYLRERINGQKPVFGVRRS-SIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCTVLN 147
              W  Y  E    + P+F  R++ SII        +       Y+IEGS+GQR C +L+
Sbjct: 86  GDCWMVYDGE--TERDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQRSCKILD 145

Query: 148 VK--KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQI 196
            +  K+  A+I+RK      V  GKDV+ L ++   +   AMAL +ILDQ+
Sbjct: 146 ERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQM 192

[Close]
BLAST of Carg06509 vs. Swiss-Prot
Match: sp|A0MFL4|LOR17_ARATH (Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 8.2e-18
Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 0 

Query: 25  THFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYR-DELVLMDPHGHCLFTVRR- 84
           T  TV + SL  + +GFTV D  G L++RVD+Y   AR R +EL+LMD  G+ L  + R 
Sbjct: 37  TTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNY---ARTRPEELILMDKDGNSLLLMHRT 96

Query: 85  KRPSLHQRWEGYLRERINGQK-----PVFGVRRSSIIGPSSLTVDMYG-------NPGKE 144
           K+ +L   W  Y      G+      P + +R++  +   S   D+         +    
Sbjct: 97  KKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNS 156

Query: 145 YQIEGSFGQRLCTVLNVK-KEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALV 196
           Y I+GS+  + C +++V   + V +I+RK   +  V  G DVF L + PGFD   AMALV
Sbjct: 157 YIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALV 216

[Close]
BLAST of Carg06509 vs. Swiss-Prot
Match: sp|Q9SF24|LOR10_ARATH (Protein LURP-one-related 10 OS=Arabidopsis thaliana OX=3702 GN=At3g11740 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 6.5e-15
Identity = 47/176 (26.70%), Postives = 91/176 (51.70%), Query Frame = 0 

Query: 29  VMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRKRPSLH 88
           +++  +      F V D  G L+F+V    P     D+ +L+D +   + T+R  + SLH
Sbjct: 18  IVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLDAYDTPILTLRENKVSLH 77

Query: 89  QRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKE-----YQIEGSFGQRLCT 148
            RW  Y  +  +    ++ ++RSS+I      +D++    KE     + ++GS+  R C 
Sbjct: 78  DRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCV 137

Query: 149 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
           V   K +A+     K   + ++++GK  FS+++ P  D AF ++L++ILD I+ ++
Sbjct: 138 VYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINRED 191

[Close]
BLAST of Carg06509 vs. TrEMBL
Match: tr|A0A0A0KYG2|A0A0A0KYG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005540 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 6.6e-97
Identity = 179/211 (84.83%), Postives = 191/211 (90.52%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNGIGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60
           MKVSSIDDS FSC G+    TTT THFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD
Sbjct: 1   MKVSSIDDSLFSCKGLVGSSTTTTTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPD 60

Query: 61  ARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLT 120
           +RYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKP+FGVRRSSIIG SS T
Sbjct: 61  SRYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPIFGVRRSSIIGRSSFT 120

Query: 121 VDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGF 180
           V+MYGNPG+EYQIEG FGQRLCTVLNVKKE VA IRRKVDASTNV+LGKDVFSLSL PGF
Sbjct: 121 VEMYGNPGEEYQIEGCFGQRLCTVLNVKKEPVATIRRKVDASTNVLLGKDVFSLSLNPGF 180

Query: 181 DGAFAMALVLILDQISGDEGI--GGEPDRTL 210
           DGAFAMALVL+LD+I+G EG+   G P++ L
Sbjct: 181 DGAFAMALVLVLDRING-EGVDSSGNPEQIL 210

[Close]
BLAST of Carg06509 vs. TrEMBL
Match: tr|A0A1S3BXM0|A0A1S3BXM0_CUCME (protein LURP-one-related 5 OS=Cucumis melo OX=3656 GN=LOC103494698 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.8e-94
Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 1   MKVSSIDDSEFSCNG-IGSIPTTTDTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP 60
           MKVSSIDDS FSC G +GS       HFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP
Sbjct: 1   MKVSSIDDSLFSCKGLVGSSXXXXXXHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGP 60

Query: 61  DARYRDELVLMDPHGHCLFTVRRKRPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSL 120
           D+RYRDELVLMDPHG CLFTVRRKRPSLHQRWEGYLRERINGQKP+FGVRRSSIIG SS 
Sbjct: 61  DSRYRDELVLMDPHGRCLFTVRRKRPSLHQRWEGYLRERINGQKPIFGVRRSSIIGRSSF 120

Query: 121 TVDMYGNPGKEYQIEGSFGQRLCTVLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPG 180
           TV+MYGNPG+EYQIEG FGQRLCTVLNV+KE VA IRRKVDAST V+LGKDVFSLSL PG
Sbjct: 121 TVEMYGNPGEEYQIEGCFGQRLCTVLNVRKEPVATIRRKVDASTKVLLGKDVFSLSLNPG 180

Query: 181 FDGAFAMALVLILDQISGDEGI--GGEPDRTL 210
           FDGAFAMALVL+LD+I+G EG+   G PD+TL
Sbjct: 181 FDGAFAMALVLVLDRING-EGVDSSGNPDQTL 211

[Close]
BLAST of Carg06509 vs. TrEMBL
Match: tr|A0A2P5EX30|A0A2P5EX30_9ROSA (LURP1-related protein domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_141240 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.3e-76
Identity = 140/176 (79.55%), Postives = 156/176 (88.64%), Query Frame = 0 

Query: 24  DTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRK 83
           +T  TV KTSLFFAGDGFTVYD KG+LVFRVDSYGPD R +DELVLMDPHG CL TVRRK
Sbjct: 16  ETSLTVSKTSLFFAGDGFTVYDPKGELVFRVDSYGPDIRDKDELVLMDPHGRCLLTVRRK 75

Query: 84  RPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCT 143
           RPSLHQRWEG+L ER +GQKP+F VRRSSIIG SS+TV++YGN G+EYQIEGSFGQR CT
Sbjct: 76  RPSLHQRWEGFLGERSDGQKPIFSVRRSSIIGRSSVTVEVYGNTGEEYQIEGSFGQRCCT 135

Query: 144 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
           + N  KE VA+I+RKVDASTNVVLGKDVFSL LKPGFDGAFAM LVL+LDQI+GD+
Sbjct: 136 IFNAGKETVAEIKRKVDASTNVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQINGDD 191

[Close]
BLAST of Carg06509 vs. TrEMBL
Match: tr|A0A2P5BH23|A0A2P5BH23_PARAD (LURP1-related protein domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_239910 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75
Identity = 139/176 (78.98%), Postives = 155/176 (88.07%), Query Frame = 0 

Query: 24  DTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRK 83
           +T  TV KTSLFF GDGFTVYD KG+LVFRVDSYGPD R +DELVLMDPHG CL TVRRK
Sbjct: 16  ETSLTVSKTSLFFTGDGFTVYDSKGELVFRVDSYGPDIRDKDELVLMDPHGRCLLTVRRK 75

Query: 84  RPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCT 143
           RPSLHQRWEG+L ER +GQKP+F VRRSSIIG SS+TV++YGN G+EYQIEGSFGQR CT
Sbjct: 76  RPSLHQRWEGFLGERSDGQKPIFSVRRSSIIGRSSVTVEVYGNTGEEYQIEGSFGQRCCT 135

Query: 144 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDE 200
           + N  KE VA+I+RKVDASTNVVLGKDVFSL LKPGFDGAFAM LVL+LDQI+GD+
Sbjct: 136 IFNAGKETVAEIKRKVDASTNVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQINGDD 191

[Close]
BLAST of Carg06509 vs. TrEMBL
Match: tr|W9R426|W9R426_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_025775 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 6.0e-74
Identity = 135/180 (75.00%), Postives = 155/180 (86.11%), Query Frame = 0 

Query: 24  DTHFTVMKTSLFFAGDGFTVYDCKGKLVFRVDSYGPDARYRDELVLMDPHGHCLFTVRRK 83
           +TH TV KTSLF+AGDGFTVYD K +LVFRVD+YGPD R + ELVLMDPHG CL TVRRK
Sbjct: 16  ETHLTVSKTSLFYAGDGFTVYDSKAELVFRVDTYGPDIREKYELVLMDPHGRCLLTVRRK 75

Query: 84  RPSLHQRWEGYLRERINGQKPVFGVRRSSIIGPSSLTVDMYGNPGKEYQIEGSFGQRLCT 143
           RPSLHQRWEG+L ER +GQKP+F V+RSSIIG S +TV++YG PG+EYQIEGSF QR CT
Sbjct: 76  RPSLHQRWEGFLGERTDGQKPIFSVKRSSIIGRSGVTVEVYGRPGEEYQIEGSFAQRCCT 135

Query: 144 VLNVKKEAVAKIRRKVDASTNVVLGKDVFSLSLKPGFDGAFAMALVLILDQISGDEGIGG 203
           + N +KE VA+IRRKVDASTNVVLGKDVFSL LKPGFDGAFAM LVL+LDQI+G++   G
Sbjct: 136 IFNARKEIVAEIRRKVDASTNVVLGKDVFSLCLKPGFDGAFAMGLVLVLDQIAGEDYFPG 195

The following BLAST results are available for this feature:
BLAST of Carg06509 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526859.12.8e-11599.04protein LURP-one-related 5-like [Cucurbita pepo subsp. pepo][more]
XP_022955632.11.1e-11498.11protein LURP-one-related 5-like [Cucurbita moschata][more]
XP_022979417.12.1e-11096.17protein LURP-one-related 5-like [Cucurbita maxima][more]
XP_004152197.19.9e-9784.83PREDICTED: protein LURP-one-related 5 [Cucumis sativus] >KGN52896.1 hypothetical... [more]
XP_008454228.12.7e-9483.49PREDICTED: protein LURP-one-related 5 [Cucumis melo][more]
BLAST of Carg06509 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80120.19.0e-6873.14Protein of unknown function (DUF567)[more]
AT3G15810.11.1e-6563.48Protein of unknown function (DUF567)[more]
AT2G38640.17.2e-2541.52Protein of unknown function (DUF567)[more]
AT5G41590.14.5e-1934.95Protein of unknown function (DUF567)[more]
AT3G11740.13.6e-1626.70Protein of unknown function (DUF567)[more]
BLAST of Carg06509 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SSC7|LOR5_ARATH1.6e-6673.14Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=... [more]
sp|Q9LVZ8|LOR12_ARATH2.0e-6463.48Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV... [more]
sp|Q9ZVI6|LOR8_ARATH1.3e-2341.52Protein LURP-one-related 8 OS=Arabidopsis thaliana OX=3702 GN=At2g38640 PE=2 SV=... [more]
sp|A0MFL4|LOR17_ARATH8.2e-1834.95Protein LURP-one-related 17 OS=Arabidopsis thaliana OX=3702 GN=At5g41590 PE=2 SV... [more]
sp|Q9SF24|LOR10_ARATH6.5e-1526.70Protein LURP-one-related 10 OS=Arabidopsis thaliana OX=3702 GN=At3g11740 PE=2 SV... [more]
BLAST of Carg06509 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYG2|A0A0A0KYG2_CUCSA6.6e-9784.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G005540 PE=4 SV=1[more]
tr|A0A1S3BXM0|A0A1S3BXM0_CUCME1.8e-9483.49protein LURP-one-related 5 OS=Cucumis melo OX=3656 GN=LOC103494698 PE=4 SV=1[more]
tr|A0A2P5EX30|A0A2P5EX30_9ROSA8.3e-7679.55LURP1-related protein domain containing protein OS=Trema orientalis OX=63057 GN=... [more]
tr|A0A2P5BH23|A0A2P5BH23_PARAD1.4e-7578.98LURP1-related protein domain containing protein OS=Parasponia andersonii OX=3476... [more]
tr|W9R426|W9R426_9ROSA6.0e-7475.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_025775 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025659Tubby-like_C
IPR007612LOR
IPR038595LOR_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06509-RACarg06509-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038595LURP-one-related superfamilyGENE3DG3DSA:3.20.90.20coord: 20..201
e-value: 6.2E-58
score: 197.4
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 22..191
e-value: 7.7E-54
score: 182.0
IPR007612LURP-one-relatedPANTHERPTHR31087FAMILY NOT NAMEDcoord: 23..201
NoneNo IPR availablePANTHERPTHR31087:SF2PROTEIN LURP-ONE-RELATED 12-RELATEDcoord: 23..201
IPR025659Tubby-like, C-terminalSUPERFAMILYSSF54518Tubby C-terminal domain-likecoord: 21..195

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06509Cla015357Watermelon (97103) v1carwmB0117
Carg06509Cla012718Watermelon (97103) v1carwmB0120
Carg06509Csa4G005540Cucumber (Chinese Long) v2carcuB0128
Carg06509Csa7G432460Cucumber (Chinese Long) v2carcuB0130
Carg06509MELO3C017878Melon (DHL92) v3.5.1carmeB0127
Carg06509MELO3C023425Melon (DHL92) v3.5.1carmeB0121
Carg06509ClCG09G002930Watermelon (Charleston Gray)carwcgB0117
Carg06509ClCG07G012600Watermelon (Charleston Gray)carwcgB0121
Carg06509CSPI04G01630Wild cucumber (PI 183967)carcpiB0133
Carg06509CSPI07G20500Wild cucumber (PI 183967)carcpiB0135
Carg06509Cucsa.096370Cucumber (Gy14) v1carcgyB0141
Carg06509CmaCh01G001450Cucurbita maxima (Rimu)carcmaB0157
Carg06509CmaCh14G013490Cucurbita maxima (Rimu)carcmaB0154
Carg06509CmoCh01G001530Cucurbita moschata (Rifu)carcmoB0166
Carg06509CmoCh14G013750Cucurbita moschata (Rifu)carcmoB0163
Carg06509Lsi02G027060Bottle gourd (USVL1VR-Ls)carlsiB106
Carg06509Lsi07G004560Bottle gourd (USVL1VR-Ls)carlsiB109
Carg06509Cp4.1LG03g13690Cucurbita pepo (Zucchini)carcpeB0176
Carg06509Cp4.1LG02g14870Cucurbita pepo (Zucchini)carcpeB0175
Carg06509CsGy4G001480Cucumber (Gy14) v2carcgybB0127
Carg06509MELO3C017878.2Melon (DHL92) v3.6.1carmedB0131
Carg06509MELO3C023425.2Melon (DHL92) v3.6.1carmedB0124
Carg06509CsaV3_7G032340Cucumber (Chinese Long) v3carcucB0139
Carg06509CsaV3_4G001610Cucumber (Chinese Long) v3carcucB0137
Carg06509Cla97C07G139400Watermelon (97103) v2carwmbB0126
Carg06509Cla97C09G165150Watermelon (97103) v2carwmbB0127
Carg06509Bhi01G002752Wax gourdcarwgoB0145
Carg06509Bhi09G000013Wax gourdcarwgoB0150
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06509Silver-seed gourdcarcarB139
Carg06509Cucurbita pepo (Zucchini)carcpeB0173
Carg06509Wax gourdcarwgoB0139