Carg06502 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06502
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box domain containing protein
Location	Cucurbita_argyrosperma_scaffold_051 : 910506 .. 911624 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGTACACAAGCTATGTTTTGCTCACAATCCAATTTTTGAGAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGTGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGGAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCATCTTACTCAAATTGA

mRNA sequence

ATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGTACACAAGCTATGTTTTGCTCACAATCCAATTTTTGAGAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGTGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGGAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCATCTTACTCAAATTGA

Coding sequence (CDS)

ATGTGGAGTAGCCTTCCTCTTGATGTTCTTGCCAACATCTTCTCCTTCCTCTCCCCAGACTCCTTGGCACGAGCTAGATCGGCCTGCAGGCATTGGCACGAGTGCGTCGATACTCGCCCCTTGAGCACCAAGCCAATTCTTTCGCAGTATCATCCCTCATGGTTCATCGCCTTGCCTTTGCGAGTACACAAGCTATGTTTTGCTCACAATCCAATTTTTGAGAATTGGCATAAGCTCTCACTGGAATTTCTTCCTGATTTAGTCAAACCAATTGCCACAGTTGGTAATCTTCTGCTTTTAAGATCCGTAAGTTCTGTTGTTCTACAATTGATCATATGCAATCCATTCACTAGTCAATTCCGGTATCTTCCAAGGCCGAACATCACTAGGAGTAATCCGGCTGTGGGGGTTGTAATACAAAACACAAGCCAAGATTCTCAGTTTCCAGAATTCGAAGTCTATGTAGCAGGTGGGATGTCAGAGGCACCACAAGGTGGCACCACTTATGAATCAAAGTTGGAAATATATGATTCAAGAAACGACTCATGGAAAATTGTAGGATCACTGCCAGTGGAATTTTCCGTGAGGCTAACAGTCTGGACTCATAATGACAGTGTCTACTCTAATGGGGTTTTGTATTGGATAACCTCTGCAAGGGCATTCAGGGTGATGGGGTTTGAGATTAACTCAAACATTTGCAGGGAATTGCAGGTGCCAATGGCTGACCGACTTGAATTTGCCGCACTTACAAGCCGAAATGGAAGGCTAGCATTAGTTGGTGCCATATGCGGTGAAAACGCCTGTGTTTGGGAGCTTGGAGATAGAGATATGTGGGCAGTGGTTGAGAAGGTGCCAAATGACTTGGGAATAAAACTTCTAGGAGGAAGCAATGGGAGATGGATAAACACCAAGTGCGTAGCAAACAATGAGGTTATGTGCTTGTACAAGGAGCTTGGAAGTGGAATGGTAATTTGGAGAGAAAGAAAAGAGAAGAACAAATGGGAATGGAATTGGATCAATGGATGTTCTTCAATTAGAAGCCAAAGAGTTGATAACTTGCCAATAAAAGGACTGCTTCTTCAACCAAGCCTTGCTCCTTTTGCATCTTACTCAAATTGA

Protein sequence

MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPLRVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPMADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRWINTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLLQPSLAPFASYSN

Homology

[Close]

BLAST of Carg06502 vs. NCBI nr
Match: XP_023528565.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.4 bits (2001), Expect = 8.7e-221
Identity = 369/372 (99.19%), Postives = 370/372 (99.46%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL
Sbjct: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPIF+NWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF
Sbjct: 61  RAHKLCFAHNPIFDNWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN
Sbjct: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM
Sbjct: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW
Sbjct: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL
Sbjct: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFA YSN
Sbjct: 361 QPSLAPFAPYSN 372

[Close]

BLAST of Carg06502 vs. NCBI nr
Match: XP_022980071.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita maxima])

HSP 1 Score: 767.3 bits (1980), Expect = 2.4e-218
Identity = 364/372 (97.85%), Postives = 369/372 (99.19%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL
Sbjct: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPIF+NWHKLSLEFLPDLVKPI+ VGNLLLLRSVSSVVLQLIICNPFTSQF
Sbjct: 61  RAHKLCFAHNPIFDNWHKLSLEFLPDLVKPISPVGNLLLLRSVSSVVLQLIICNPFTSQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSR+
Sbjct: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRS 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSWKIVGSLPVEFSVRLTVWTHN+SVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM
Sbjct: 181 DSWKIVGSLPVEFSVRLTVWTHNESVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW
Sbjct: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           INTKCV NNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRS+RVDNLPIKGLLL
Sbjct: 301 INTKCVGNNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSKRVDNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFASYSN
Sbjct: 361 QPSLAPFASYSN 372

[Close]

BLAST of Carg06502 vs. NCBI nr
Match: XP_022956130.1 (protein UNUSUAL FLORAL ORGANS-like [Cucurbita moschata])

HSP 1 Score: 766.9 bits (1979), Expect = 3.1e-218
Identity = 365/372 (98.12%), Postives = 369/372 (99.19%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTK ILSQYHPSWFIALPL
Sbjct: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKSILSQYHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPIF+NWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF
Sbjct: 61  RAHKLCFAHNPIFDNWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLPRPNITRSNPAVGVVI+NTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN
Sbjct: 121 RYLPRPNITRSNPAVGVVIENTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM
Sbjct: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRLALVGAICGENACVWEL DRDMWAVVEKVPNDLGIKLLGGSNGRW
Sbjct: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELRDRDMWAVVEKVPNDLGIKLLGGSNGRW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           INTKCVANNEVMCLYKELGSGMVIWRERKE+NKWEWNWINGCSSIRS+RVDNLPIKGLLL
Sbjct: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEQNKWEWNWINGCSSIRSKRVDNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFASYSN
Sbjct: 361 QPSLAPFASYSN 372

[Close]

BLAST of Carg06502 vs. NCBI nr
Match: XP_004152210.1 (PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus] >KGN52875.1 hypothetical protein Csa_4G004860 [Cucumis sativus])

HSP 1 Score: 672.2 bits (1733), Expect = 1.0e-189
Identity = 311/372 (83.60%), Postives = 343/372 (92.20%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLP D+LANIFSFLSPDSLARARSAC+ WHEC+DT PL+T+PILSQ HPSWFIALPL
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACKQWHECIDTCPLNTEPILSQSHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPI +NWHKLSLEFLPDLVKPIATVG+LL LRS SSVVLQLI+CNPFT+QF
Sbjct: 61  RAHKLCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSTSSVVLQLILCNPFTTQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLPRPNI+R+NPAVGVVIQNT QDSQ P+F+VYVAGGMS APQGGTTYESKLE+YDSRN
Sbjct: 121 RYLPRPNISRTNPAVGVVIQNTRQDSQIPDFKVYVAGGMSVAPQGGTTYESKLEMYDSRN 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSW+IVGSLPVEF+VRLTVWTHN+SVYSNG+LYWITSARAF VMGF+I+SN CRELQVPM
Sbjct: 181 DSWEIVGSLPVEFAVRLTVWTHNESVYSNGILYWITSARAFSVMGFDIDSNNCRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRL +VG +CGE+ACVWE  D D+W +VEKVPN+LG KL+GGSNG W
Sbjct: 241 ADRLEFAALTSRNGRLTIVGGVCGEDACVWECRDGDVWVLVEKVPNELGRKLVGGSNGSW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           IN+KC  NNEVMCLYKELG+GMV+WRERKEKN WEW WI+GCSSIR + V NLPIKGLLL
Sbjct: 301 INSKCAWNNEVMCLYKELGNGMVVWRERKEKNTWEWVWIDGCSSIRGKIVHNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFAS SN
Sbjct: 361 QPSLAPFASKSN 372

[Close]

BLAST of Carg06502 vs. NCBI nr
Match: XP_022153631.1 (protein UNUSUAL FLORAL ORGANS-like [Momordica charantia])

HSP 1 Score: 662.9 bits (1709), Expect = 6.3e-187
Identity = 309/372 (83.06%), Postives = 338/372 (90.86%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWS LPLD+LANIFSFLSPDSLARARSAC+HWHECVDTRP  T+PI S  HPSWFIALPL
Sbjct: 11  MWSGLPLDLLANIFSFLSPDSLARARSACKHWHECVDTRPSCTEPISSPCHPSWFIALPL 70

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNP+ +NWH+LSLEFLP+LVK I+ VG+LLLLRS+SSVVLQL+ICNPFT QF
Sbjct: 71  RAHKLCFAHNPLLDNWHRLSLEFLPELVKSISPVGSLLLLRSISSVVLQLVICNPFTCQF 130

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           +YLP+PNI R+NPAVGVVIQNT Q+SQFP+F +YVAGGMSEAP+GGT YESKLE+YDSRN
Sbjct: 131 QYLPKPNIARTNPAVGVVIQNTGQNSQFPDFMIYVAGGMSEAPKGGTMYESKLEMYDSRN 190

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           +SW+IVGS+PVEFSVRLTVWT N+SVYSNGVLYWITSARAF VMGFEI+SNICRELQVPM
Sbjct: 191 NSWRIVGSMPVEFSVRLTVWTQNESVYSNGVLYWITSARAFSVMGFEIDSNICRELQVPM 250

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFA+LT RNGRLALVG ICGE+ACVWELGD DMW +VE VPNDLGIKLLGG N  W
Sbjct: 251 ADRLEFASLTCRNGRLALVGGICGEDACVWELGDGDMWVLVETVPNDLGIKLLGGCNRSW 310

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           INTKCV NNEVMCLYKELGSGMVIWRE KE NK EW W+ GCSSIR +RV NLPIKGLLL
Sbjct: 311 INTKCVGNNEVMCLYKELGSGMVIWREIKEINKREWVWVEGCSSIRGKRVHNLPIKGLLL 370

Query: 361 QPSLAPFASYSN 373
            PSLAPFASYSN
Sbjct: 371 HPSLAPFASYSN 382

[Close]

BLAST of Carg06502 vs. TAIR10
Match: AT3G22350.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 58.9 bits (141), Expect = 7.6e-09
Identity = 62/264 (23.48%), Postives = 107/264 (40.53%), Query Frame = 0


Query: 3   SSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYH--PSWFIALPL 62
           S LPLD++  I S +S  SL R RS C+ W+     R  S K     +H  P   + L L
Sbjct: 2   SDLPLDLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQK----HFHIAPKESMVLML 61

Query: 63  RVHKLCFAHNPIFENWHKLSLEFLPDL--------------VKPIATVGNLLLLRSVSSV 122
           + +++C  +  I  N    S+EF   L              +  +     LLL  +  + 
Sbjct: 62  KEYRVCSMN--INLNVSPPSVEFQGTLGIKDDSHSNLGQVEIVEVYHCDGLLLCATRDN- 121

Query: 123 VLQLIICNPFTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGG 182
             +L++ NP   + R++   +  R      +  +N     +  +   Y        P  G
Sbjct: 122 --RLVVWNPCLGETRWIQLKDECRRYSTFALGYENNKFCRRNYKILRYWGWFHDHIPDDG 181

Query: 183 TTYESKLEIYDSRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGF 242
             +  + EIYD R+DSWK++  +P +    ++V      V   G  YW  S +   +  F
Sbjct: 182 GRF--RFEIYDFRSDSWKVLDDVPDDRFPPVSV------VSLKGNTYWFGSNKKDFLRSF 241

Query: 243 EINSNICRELQVPMADRLEFAALT 251
           +  +     + +P +    F AL+
Sbjct: 242 DFTTERFNHIGLPPSRDHGFMALS 248

[Close]

BLAST of Carg06502 vs. TAIR10
Match: AT3G22650.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-07
Identity = 66/265 (24.91%), Postives = 118/265 (44.53%), Query Frame = 0


Query: 3   SSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPLRV 62
           S LP+D++  I   +  + L + +  C+ W   +  +    K +        FI    R+
Sbjct: 7   SLLPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFIYKYLDLFQEQERFI----RI 66

Query: 63  HKLCFAHNPI--FENWHKLSLEFLPDLVKPIATV---GNLLLLR--SVSSVVLQLIICNP 122
            ++    +P+    +   +  EF  D V  I+T+     LLL R  +  S   +L + NP
Sbjct: 67  DRIVQIIDPVKGARSSSPIPQEF--DNVAQISTMVHCDGLLLCRCKNERSRSYKLAVWNP 126

Query: 123 FTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEI 182
           F S+ +++   +   SN   G    N  +D ++    ++  G + +  +   +YE K++I
Sbjct: 127 FLSRVKWIEPMDFYSSNDFYGFGYDNVCRD-EYKLLRIF-DGEIEDESEIAGSYEPKIQI 186

Query: 183 YDSRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRE 242
           YD ++DSW+IV    V     +    H    ++N    +I S   F    F+I  N+  E
Sbjct: 187 YDFKSDSWRIVDDTRVSVKGNMYWIAH----WNNRPEIFIQSF-DFSTETFKIVCNLPFE 246

Query: 243 LQVPMADRLEFAALTS-RNGRLALV 260
             V     L+ AAL+S R  RL+L+
Sbjct: 247 CNV-----LDTAALSSLRGDRLSLL 253

[Close]

BLAST of Carg06502 vs. TAIR10
Match: AT1G57790.1 (F-box family protein)

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 56/229 (24.45%), Postives = 86/229 (37.55%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHE-CVDTRPLSTKPILSQYHPSWFIALP 60
           +W  LPL++L+++ +FL      RA   C+ W E  V  R +   P        W +  P
Sbjct: 12  LWKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDKSP--------WLMYFP 71

Query: 61  LRVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATV---GNLLLLRSVSSVVLQLIICNPF 120
              +   F ++P   N  K ++E    LV  I      G LL+ +  SS     ++ NPF
Sbjct: 72  ETKNTYDF-YDP--SNCKKYTMELPKSLVGFIVRYSKDGWLLMSQEDSS---HFVLFNPF 131

Query: 121 TSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIY 180
           T     LP  ++                      F  Y   G S AP         ++ Y
Sbjct: 132 TMDVVALPFLHL----------------------FTYYQLVGFSSAPTSSECVVFTIKDY 191

Query: 181 DSRNDSWKIVGSLPVEFSVRLTVWT------------HNDSVYSNGVLY 214
           D  + + +        +S   T+WT            HN+ V+SNGV Y
Sbjct: 192 DPGHVTIR-------TWSPGQTMWTSMQVESQFLDVDHNNVVFSNGVFY 197

[Close]

BLAST of Carg06502 vs. TAIR10
Match: AT3G17500.1 (F-box family protein)

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-05
Identity = 52/194 (26.80%), Postives = 79/194 (40.72%), Query Frame = 0


Query: 3   SSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL-- 62
           S+LPLD++  I S +   SL R RS C+ W+ C   +  + K   S      F+ L L  
Sbjct: 2   SNLPLDLVEEILSRVPATSLKRLRSTCKSWNNCYKDQRFTEKH--SVIAAKQFLVLMLKD 61

Query: 63  -RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNL-----LLLRSVSSVVLQLIICN 122
            RV  +    N I  N    S+E L  +V P   +  +     LLL +     L+  + N
Sbjct: 62  CRVSSVSVNLNEIHNNIAAPSIE-LKGVVGPQMQISGIFHCDGLLLCTTKDDRLE--VWN 121

Query: 123 PFTSQFRYLPRP--NITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESK 182
           P T Q R +       T S   +G V  N+    +   +  +                S+
Sbjct: 122 PCTGQTRRVQHSIHYKTNSEFVLGYVNNNSRHSYKILRYWNFYMSNYR---------VSE 181

Query: 183 LEIYDSRNDSWKIV 187
            EIYD  +DSW+ +
Sbjct: 182 FEIYDFSSDSWRFI 181

[Close]

BLAST of Carg06502 vs. Swiss-Prot
Match: sp|Q9LUJ6|FB176_ARATH (Putative F-box protein At3g22650 OS=Arabidopsis thaliana OX=3702 GN=At3g22650 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 67/275 (24.36%), Postives = 121/275 (44.00%), Query Frame = 0


Query: 3   SSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPLRV 62
           S LP+D++  I   +  + L + +  C+ W   +  +    K +        FI    R+
Sbjct: 7   SLLPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFIYKYLDLFQEQERFI----RI 66

Query: 63  HKLCFAHNPI--FENWHKLSLEFLPDLVKPIATV---GNLLLLR--SVSSVVLQLIICNP 122
            ++    +P+    +   +  EF  D V  I+T+     LLL R  +  S   +L + NP
Sbjct: 67  DRIVQIIDPVKGARSSSPIPQEF--DNVAQISTMVHCDGLLLCRCKNERSRSYKLAVWNP 126

Query: 123 FTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEI 182
           F S+ +++   +   SN   G    N  +D ++    ++  G + +  +   +YE K++I
Sbjct: 127 FLSRVKWIEPMDFYSSNDFYGFGYDNVCRD-EYKLLRIF-DGEIEDESEIAGSYEPKIQI 186

Query: 183 YDSRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWIT----------SARAFRVMG 242
           YD ++DSW+IV    +++S+          V   G +YWI            +  F    
Sbjct: 187 YDFKSDSWRIVDDTRLDWSIDPPC----KGVSVKGNMYWIAHWNNRPEIFIQSFDFSTET 246

Query: 243 FEINSNICRELQVPMADRLEFAALTS-RNGRLALV 260
           F+I  N+  E  V     L+ AAL+S R  RL+L+
Sbjct: 247 FKIVCNLPFECNV-----LDTAALSSLRGDRLSLL 264

[Close]

BLAST of Carg06502 vs. Swiss-Prot
Match: sp|Q1PEN2|FB174_ARATH (F-box protein At3g22350 OS=Arabidopsis thaliana OX=3702 GN=At3g22350 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.7e-06
Identity = 51/204 (25.00%), Postives = 85/204 (41.67%), Query Frame = 0


Query: 3   SSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYH--PSWFIALPL 62
           S LPLD++  I S +S  SL R RS C+ W+     R  S K     +H  P   + L L
Sbjct: 2   SDLPLDLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQK----HFHIAPKESMVLML 61

Query: 63  RVHKLCFAHNPIFENWHKLSLEFLPDL--------------VKPIATVGNLLLLRSVSSV 122
           + +++C  +  I  N    S+EF   L              +  +     LLL  +  + 
Sbjct: 62  KEYRVCSMN--INLNVSPPSVEFQGTLGIKDDSHSNLGQVEIVEVYHCDGLLLCATRDN- 121

Query: 123 VLQLIICNPFTSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGG 182
             +L++ NP   + R++   +  R      +  +N     +  +   Y        P  G
Sbjct: 122 --RLVVWNPCLGETRWIQLKDECRRYSTFALGYENNKFCRRNYKILRYWGWFHDHIPDDG 181

Query: 183 TTYESKLEIYDSRNDSWKIVGSLP 191
             +  + EIYD R+DSWK++  +P
Sbjct: 182 GRF--RFEIYDFRSDSWKVLDDVP 194

[Close]

BLAST of Carg06502 vs. Swiss-Prot
Match: sp|Q9FVS1|FBK23_ARATH (F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana OX=3702 GN=At1g57790 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-04
Identity = 56/229 (24.45%), Postives = 86/229 (37.55%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHE-CVDTRPLSTKPILSQYHPSWFIALP 60
           +W  LPL++L+++ +FL      RA   C+ W E  V  R +   P        W +  P
Sbjct: 12  LWKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDKSP--------WLMYFP 71

Query: 61  LRVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATV---GNLLLLRSVSSVVLQLIICNPF 120
              +   F ++P   N  K ++E    LV  I      G LL+ +  SS     ++ NPF
Sbjct: 72  ETKNTYDF-YDP--SNCKKYTMELPKSLVGFIVRYSKDGWLLMSQEDSS---HFVLFNPF 131

Query: 121 TSQFRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIY 180
           T     LP  ++                      F  Y   G S AP         ++ Y
Sbjct: 132 TMDVVALPFLHL----------------------FTYYQLVGFSSAPTSSECVVFTIKDY 191

Query: 181 DSRNDSWKIVGSLPVEFSVRLTVWT------------HNDSVYSNGVLY 214
           D  + + +        +S   T+WT            HN+ V+SNGV Y
Sbjct: 192 DPGHVTIR-------TWSPGQTMWTSMQVESQFLDVDHNNVVFSNGVFY 197

[Close]

BLAST of Carg06502 vs. TrEMBL
Match: tr|A0A0A0KTC6|A0A0A0KTC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004860 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 6.9e-190
Identity = 311/372 (83.60%), Postives = 343/372 (92.20%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLP D+LANIFSFLSPDSLARARSAC+ WHEC+DT PL+T+PILSQ HPSWFIALPL
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACKQWHECIDTCPLNTEPILSQSHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPI +NWHKLSLEFLPDLVKPIATVG+LL LRS SSVVLQLI+CNPFT+QF
Sbjct: 61  RAHKLCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSTSSVVLQLILCNPFTTQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLPRPNI+R+NPAVGVVIQNT QDSQ P+F+VYVAGGMS APQGGTTYESKLE+YDSRN
Sbjct: 121 RYLPRPNISRTNPAVGVVIQNTRQDSQIPDFKVYVAGGMSVAPQGGTTYESKLEMYDSRN 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSW+IVGSLPVEF+VRLTVWTHN+SVYSNG+LYWITSARAF VMGF+I+SN CRELQVPM
Sbjct: 181 DSWEIVGSLPVEFAVRLTVWTHNESVYSNGILYWITSARAFSVMGFDIDSNNCRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRL +VG +CGE+ACVWE  D D+W +VEKVPN+LG KL+GGSNG W
Sbjct: 241 ADRLEFAALTSRNGRLTIVGGVCGEDACVWECRDGDVWVLVEKVPNELGRKLVGGSNGSW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           IN+KC  NNEVMCLYKELG+GMV+WRERKEKN WEW WI+GCSSIR + V NLPIKGLLL
Sbjct: 301 INSKCAWNNEVMCLYKELGNGMVVWRERKEKNTWEWVWIDGCSSIRGKIVHNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFAS SN
Sbjct: 361 QPSLAPFASKSN 372

[Close]

BLAST of Carg06502 vs. TrEMBL
Match: tr|A0A1S4E0E5|A0A1S4E0E5_CUCME (protein UNUSUAL FLORAL ORGANS-like OS=Cucumis melo OX=3656 GN=LOC103494716 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 9.0e-182
Identity = 304/372 (81.72%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLP D+LANIFSFLSPDSLARARSAC+HWHEC+DT PL+T+PI SQ HPSWFIALPL
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACKHWHECIDTCPLNTEPIPSQCHPSWFIALPL 60

Query: 61  RVHKLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQF 120
           R HKLCFAHNPI +NWHKLSLEFLPDLVKPIATVG+LL LRS+SSVVLQLI+CNPFT+QF
Sbjct: 61  RAHKLCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSISSVVLQLILCNPFTTQF 120

Query: 121 RYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSRN 180
           RYLP PNI R+NPAVGVVIQNTSQDSQ P+F+VYVAGGMS APQGGTTYESKLE+YDSRN
Sbjct: 121 RYLPWPNIIRTNPAVGVVIQNTSQDSQIPDFKVYVAGGMSMAPQGGTTYESKLEMYDSRN 180

Query: 181 DSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVPM 240
           DSWKIVGSLPVEF+VRLTVWTHN+SVYSNG LYWITSARAF VMGF+++SN CRELQVPM
Sbjct: 181 DSWKIVGSLPVEFAVRLTVWTHNESVYSNGTLYWITSARAFSVMGFDVDSNNCRELQVPM 240

Query: 241 ADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGRW 300
           ADRLEFAALTSRNGRL +VG +CGE+ACVWE  D DMW +VEKVPN+LG KL+GGSNG W
Sbjct: 241 ADRLEFAALTSRNGRLTIVGGVCGEDACVWECRDGDMWVLVEKVPNELGRKLVGGSNGSW 300

Query: 301 INTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLLL 360
           INTKC  NNEVMCLYKELG+GMV+ RE           I+GCSSIR +RV NLPIKGLLL
Sbjct: 301 INTKCAWNNEVMCLYKELGNGMVVRREXXXXXXXXXXXIDGCSSIRGKRVHNLPIKGLLL 360

Query: 361 QPSLAPFASYSN 373
           QPSLAPFAS SN
Sbjct: 361 QPSLAPFASKSN 372

[Close]

BLAST of Carg06502 vs. TrEMBL
Match: tr|A0A1R3G865|A0A1R3G865_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27915 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.9e-132
Identity = 222/368 (60.33%), Postives = 279/368 (75.82%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWS+LP D+LA +FSFLSPDSLA ARSACRHWH C  T P S    L Q+H +WF+ALP 
Sbjct: 1   MWSNLPFDILAKVFSFLSPDSLACARSACRHWHTCAGTYPSSL--TLPQHHQAWFLALPT 60

Query: 61  RVH-KLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQ 120
           R   + C+ HNP+  NWH LS +FLPD ++P+A++G L+L+R  +  +LQL +CNPFT Q
Sbjct: 61  RSRGQRCYVHNPVINNWHMLSFDFLPDPIRPVASIGTLILVRPTNCTILQLALCNPFTRQ 120

Query: 121 FRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSR 180
           FRYLP  NITR+NPAVGVV   +      P+F VYVAGGMSEAP+GG TYE+ LE+YDS 
Sbjct: 121 FRYLPMLNITRTNPAVGVVTLESGHHGPNPQFRVYVAGGMSEAPRGGATYEATLEMYDSV 180

Query: 181 NDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVP 240
           +D+W+I G +P EF+VRLTVWT N+SVYSNGV+YW+TSARA+ VMG+EINSN  REL VP
Sbjct: 181 DDTWQITGFMPTEFAVRLTVWTPNESVYSNGVMYWMTSARAYSVMGYEINSNTWRELSVP 240

Query: 241 MADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGR 300
           MADRLEFAAL  RNGRL L G   G +AC+WEL + D W +++KVP++LG+K LGG    
Sbjct: 241 MADRLEFAALLWRNGRLTLAGGTSGGDACIWELKEGDDWCLIDKVPSELGMKFLGGKRS- 300

Query: 301 WINTKCVANNEVMCLYKELGSGMVIWRERKEKN-KWEWNWINGCSSIRSQRVDNLPIKGL 360
           W +TKCV +   +CLY+ELGSGMV+WRE +EK+ K EW W+ GC  I  ++V NL IKG+
Sbjct: 301 WRSTKCVGSEGAICLYRELGSGMVMWREIEEKSEKREWFWVEGCHFIGGKQVQNLAIKGV 360

Query: 361 LLQPSLAP 367
            LQP+LAP
Sbjct: 361 FLQPNLAP 365

[Close]

BLAST of Carg06502 vs. TrEMBL
Match: tr|A0A2P5BQC4|A0A2P5BQC4_PARAD (F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_219870 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.9e-132
Identity = 222/370 (60.00%), Postives = 286/370 (77.30%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MW  LP D+LANIFS L+PDSLA A S CR WH C    P  +   LSQ HP WF+ALP+
Sbjct: 1   MWRDLPFDLLANIFSCLTPDSLACAGSTCRQWHMCAKAWPFGSSSSLSQSHPGWFMALPI 60

Query: 61  RVH-KLCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQ 120
           R H  LC+A NPIF+NWH+LSL+F+P  V+P+A+V +LLL R+ +   L L++CNPFT +
Sbjct: 61  RGHTPLCYAQNPIFKNWHRLSLDFIPGQVRPLASVKSLLLFRATNPANLHLVLCNPFTRE 120

Query: 121 FRYLPRPNITRSNPAVGVVI--QNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYD 180
            + LP+ N++RSNPAVGV+     +SQ+  FP F+VYVAGGMSEAP+GG  YES LE+YD
Sbjct: 121 HKQLPKLNMSRSNPAVGVIALDDRSSQNLSFPCFQVYVAGGMSEAPRGGARYESTLEMYD 180

Query: 181 SRNDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQ 240
           SR+D+W++VGSLPVEF+VRLTVWT NDSVY +GVLYWITSARA+ +MGF+I+SN  REL+
Sbjct: 181 SRHDTWQVVGSLPVEFAVRLTVWTPNDSVYCDGVLYWITSARAYSLMGFDISSNTWRELR 240

Query: 241 VPMADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSN 300
           VPMAD+LEFAAL  RN RL LVG  CGE+A VWELG  D+W +VEKVP +LG+K LG   
Sbjct: 241 VPMADKLEFAALVLRNERLTLVGGTCGEDASVWELGQGDIWVLVEKVPVELGMKFLGEKE 300

Query: 301 GRWINTKCVANNEVMCLYKELGSGMVIWRE-RKEKNKWEWNWINGCSSIRSQRVDNLPIK 360
             W+NTKCV++N  + LY++LGSGM+ W+E R ++  WEW W+ GCSS+R ++V NL IK
Sbjct: 301 S-WVNTKCVSSNGAIYLYRDLGSGMIAWKEIRDQEGNWEWFWVEGCSSVRGKKVRNLQIK 360

Query: 361 GLLLQPSLAP 367
           G+++ P+LAP
Sbjct: 361 GVVISPNLAP 369

[Close]

BLAST of Carg06502 vs. TrEMBL
Match: tr|B9RV30|B9RV30_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis OX=3988 GN=RCOM_0898450 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 3.8e-132
Identity = 222/372 (59.68%), Postives = 279/372 (75.00%), Query Frame = 0


Query: 1   MWSSLPLDVLANIFSFLSPDSLARARSACRHWHECVDTRPLSTKPILSQYHPSWFIALPL 60
           MWSSLP D+LANIFSFLSPDSLARARSACRHWH CVD  PLS  P +  +HP WF+ALP 
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACRHWHTCVDAYPLSLAPSMLHHHPPWFVALPT 60

Query: 61  RVHK-LCFAHNPIFENWHKLSLEFLPDLVKPIATVGNLLLLRSVSSVVLQLIICNPFTSQ 120
           R  +  C+ HNP+ + WH LSLEFL D  +PI  +  L+LL++  S +L L +CNPFT Q
Sbjct: 61  RNREPCCYVHNPVTKRWHMLSLEFLSDPFRPITCISGLILLKATKSTILSLAMCNPFTRQ 120

Query: 121 FRYLPRPNITRSNPAVGVVIQNTSQDSQFPEFEVYVAGGMSEAPQGGTTYESKLEIYDSR 180
           FR+LP  NI R+NPAVGVVI N+SQ      F VYVAGGMSEA +GG TYE  LE+YDSR
Sbjct: 121 FRHLPLLNIARTNPAVGVVILNSSQ-----HFRVYVAGGMSEASRGGATYEPTLEMYDSR 180

Query: 181 NDSWKIVGSLPVEFSVRLTVWTHNDSVYSNGVLYWITSARAFRVMGFEINSNICRELQVP 240
           +++WKI GS+PVEF+VRLTVW+ N+SVYSNG+LYWITSARAF +M FEI SN  +E+ VP
Sbjct: 181 HNTWKIAGSMPVEFAVRLTVWSPNESVYSNGILYWITSARAFSMMAFEIESNKWQEVSVP 240

Query: 241 MADRLEFAALTSRNGRLALVGAICGENACVWELGDRDMWAVVEKVPNDLGIKLLGGSNGR 300
           MADRLEFA L  R+GRL LVG+  G  A VW+L   D+W ++EKVP +LG+KLL G    
Sbjct: 241 MADRLEFATLVQRSGRLTLVGSTGGGEAFVWKLNKGDIWCLIEKVPVELGVKLLRG-KAS 300

Query: 301 WINTKCVANNEVMCLYKELGSGMVIWRERKEKNKWEWNWINGCSSIRSQRVDNLPIKGLL 360
           W + KCV     +CLY++LGSGM++WRE +EK KWEW W+ GC SI  ++V+N+ ++GLL
Sbjct: 301 WGSIKCVGGEGAICLYRDLGSGMLVWREVREKGKWEWLWVEGCCSINGKQVENISVRGLL 360

Query: 361 LQPSLAPFASYS 372
           + P+LA   ++S
Sbjct: 361 IHPNLASSCAFS 366

The following BLAST results are available for this feature:

BLAST of Carg06502 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528565.1	8.7e-221	99.19	protein UNUSUAL FLORAL ORGANS-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980071.1	2.4e-218	97.85	protein UNUSUAL FLORAL ORGANS-like [Cucurbita maxima]	[more]
XP_022956130.1	3.1e-218	98.12	protein UNUSUAL FLORAL ORGANS-like [Cucurbita moschata]	[more]
XP_004152210.1	1.0e-189	83.60	PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus] >KGN52875.1 hypo...	[more]
XP_022153631.1	6.3e-187	83.06	protein UNUSUAL FLORAL ORGANS-like [Momordica charantia]	[more]

BLAST of Carg06502 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22350.1	7.6e-09	23.48	F-box and associated interaction domains-containing protein	[more]
AT3G22650.1	3.2e-07	24.91	F-box and associated interaction domains-containing protein	[more]
AT1G57790.1	2.3e-05	24.45	F-box family protein	[more]
AT3G17500.1	3.0e-05	26.80	F-box family protein	[more]

BLAST of Carg06502 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LUJ6\|FB176_ARATH	3.0e-07	24.36	Putative F-box protein At3g22650 OS=Arabidopsis thaliana OX=3702 GN=At3g22650 PE...	[more]
sp\|Q1PEN2\|FB174_ARATH	5.7e-06	25.00	F-box protein At3g22350 OS=Arabidopsis thaliana OX=3702 GN=At3g22350 PE=2 SV=1	[more]
sp\|Q9FVS1\|FBK23_ARATH	4.1e-04	24.45	F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana OX=3702 GN=At1g5779...	[more]

BLAST of Carg06502 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTC6\|A0A0A0KTC6_CUCSA	6.9e-190	83.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004860 PE=4 SV=1	[more]
tr\|A0A1S4E0E5\|A0A1S4E0E5_CUCME	9.0e-182	81.72	protein UNUSUAL FLORAL ORGANS-like OS=Cucumis melo OX=3656 GN=LOC103494716 PE=4 ...	[more]
tr\|A0A1R3G865\|A0A1R3G865_COCAP	2.9e-132	60.33	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27915 PE=4 ...	[more]
tr\|A0A2P5BQC4\|A0A2P5BQC4_PARAD	2.9e-132	60.00	F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2...	[more]
tr\|B9RV30\|B9RV30_RICCO	3.8e-132	59.68	Ubiquitin-protein ligase, putative OS=Ricinus communis OX=3988 GN=RCOM_0898450 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR017451	F-box-assoc_interact_dom
IPR006652	Kelch_1
IPR015915	Kelch-typ_b-propeller
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06502-RA	Carg06502-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 5..44 e-value: 1.3E-5 score: 34.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..44 e-value: 4.2E-10 score: 39.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..46 score: 9.789
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 2..41 e-value: 1.7E-10 score: 42.7
None	No IPR available	PANTHER	PTHR44829	FAMILY NOT NAMED	coord: 1..315
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 98..286 e-value: 1.6E-7 score: 32.4
IPR015915	Kelch-type beta propeller	SUPERFAMILY	SSF117281	Kelch motif	coord: 66..265
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 152..190 e-value: 1.1E-5 score: 24.8
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 108..316 e-value: 3.9E-12 score: 43.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 1..71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06502	Cla012701	Watermelon (97103) v1	carwmB0120
Carg06502	Csa4G004860	Cucumber (Chinese Long) v2	carcuB0128
Carg06502	MELO3C017898	Melon (DHL92) v3.5.1	carmeB0127
Carg06502	ClCG07G012780	Watermelon (Charleston Gray)	carwcgB0121
Carg06502	CSPI04G01430	Wild cucumber (PI 183967)	carcpiB0133
Carg06502	Cucsa.096560	Cucumber (Gy14) v1	carcgyB0141
Carg06502	CmaCh14G013410	Cucurbita maxima (Rimu)	carcmaB0154
Carg06502	CmoCh14G013690	Cucurbita moschata (Rifu)	carcmoB0163
Carg06502	Lsi07G004760	Bottle gourd (USVL1VR-Ls)	carlsiB109
Carg06502	Cp4.1LG03g13830	Cucurbita pepo (Zucchini)	carcpeB0176
Carg06502	CsGy4G001320	Cucumber (Gy14) v2	carcgybB0127
Carg06502	MELO3C017898.2	Melon (DHL92) v3.6.1	carmedB0131
Carg06502	CsaV3_4G001420	Cucumber (Chinese Long) v3	carcucB0137
Carg06502	Cla97C07G139580	Watermelon (97103) v2	carwmbB0126
Carg06502	Bhi01G002776	Wax gourd	carwgoB0145

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06502	Silver-seed gourd	carcarB139
Carg06502	Cucurbita maxima (Rimu)	carcmaB0157
Carg06502	Cucurbita moschata (Rifu)	carcmoB0166
Carg06502	Cucurbita pepo (Zucchini)	carcpeB0173
Carg06502	Cucurbita pepo (Zucchini)	carcpeB0175
Carg06502	Wild cucumber (PI 183967)	carcpiB0135
Carg06502	Cucumber (Chinese Long) v2	carcuB0130
Carg06502	Cucumber (Chinese Long) v3	carcucB0139
Carg06502	Bottle gourd (USVL1VR-Ls)	carlsiB106
Carg06502	Melon (DHL92) v3.5.1	carmeB0121
Carg06502	Melon (DHL92) v3.6.1	carmedB0124
Carg06502	Watermelon (Charleston Gray)	carwcgB0117
Carg06502	Watermelon (97103) v1	carwmB0117
Carg06502	Watermelon (97103) v2	carwmbB0127
Carg06502	Wax gourd	carwgoB0150
Carg06502	Wax gourd	carwgoB0139