Carg06498 (gene) Silver-seed gourd

Overview
NameCarg06498
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGlutaredoxin
LocationCucurbita_argyrosperma_scaffold_051 : 893683 .. 895713 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTAGGACAATTTGATATTTGCGCTAGATTTTTTATAAAAAATTTGATGACTGCCACCTAGTGTGAAATTATATGGTAGTGAGGACATACAAATCATCATGACCTTACTTGAACATGATATATAAGAACTTTAGACTTAATTTTGATGTACATCCTTGAGTTCTAAGACAACATCCAAATTATAAAAGTTGACCGACAAAGCTTACTATGATATATTATGGTGCCTCATTTTGAACTGTTGATAGGTGGTGCCTGGGTTTAATTACCAGCATGGAATGAGATACTCAACGACTGTACCTAATGATCCTGATACTCATGATGATTTCAAACCTACTAACAAACTTGAGAATTCTAGCCTTTCTTTGAGGGATGTTGTTGAACAGGTATGTATGCTTTTGCGAAAGAACTGGCAACATTTATCTAGGAAGCACATTAGAAACTATGTGCTTTCCCTTTTCCTTTTTTTGATAAGAGAAAATTTCATGATTAAATGAAATACACAAAATGGACAAAAAGTAGAAAAGTTATTTGTTTAAGGGTGTGAGTTGGATGTGAGGAATTTAAAAACAAGTACTAAATTTCGTTCTGTATTGTTATTAGGATGTACAGCAAAATCCTGTGATGATTTATATGAAAGGGGTGCCGGATGCTCCTCAATGTGGATTTAGCTCTCTTGCTGTTAGAGTGTTGAATTTATATAGTAAGTGTTCATTGTGTGTGCGTGTGTTTGTTTTAACGAGTATGTTCTCTTTTGGTTAAGCTTATTTTACGACGTACCTATTTGTTCTCCTGGAACGGAAATTGATGGTCTAATAATCCTATGTTTTGAGCCAATATTGTGTCTGTTTTCTTTGTTTGTAATGTTTGTAAAGAGTACATTATCACTATATGGTCTCAATACTTCAAATTACTGGCACAGTGATCGCTTATGTATACCATTATCTTGCTTCTTTATAATCACATGAATTTTGTTTGTATGGTCTTCGGTTTTCTGCTCATTTCTGCTACAATAATATAGTTGAATCTGTATTGAATTTTCTAATAATATAGTTGAATGTTTGTTCCGTGTCCATCACGGGATATAAATCCTTGCAACCCCACTCTGTTGCTTGTCATCTTTTTCCGTGATTCTCATATGTTTAAGTATTGCAGACGTACCTTTGAGTGCTAGAAATATCTTGGAAGATGCCGAGCTTAAAAATGCTGTGAAATCCTTTAGGTATGCACTCTTCGATACCAAACTTTCTCTCGAAATATTTGAGTTGAAAGAGATTAAGTCATCTCGAAATATTTGATTTGAAAAAGATTAAGTCATGTCTGCGTAATATTTATAAATATAATCTACGAAACTGCGAAGGACTTATTAAATGAACTACAGTTTGTATGATGATATCTGCTACTTGGAAAACGTTTCCAAACAGCAAATATAAACTCGTGATATTGTTGGTCGAAGAAGTAAAATTGTTATGAATATGTTGTGATATGAGAAATTTTTGTATGCAGCAACTGGCCAACATTTCCCCAGATTTTCATCAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGGTATCCAATTTACAACCTACGCAGTTCATTTCTCTTAGGATCGTTCAAGGATTTCTGGGGTTATTATCACTTTTTCCCCCAGAAAACATGACTCAACATTATTTTCAAGGTGCCCCCTGTTGACATTGTTCTTATTCGTGTGTAGACTGGAGAATTGAAGGAAAAGCTCAATGATATTGCAGCGAATCAGAAGACTGAATAAGTTCTCAGTCACCAAGTATGAAGAAAGAGATATGGTTAAACCCATCTTCCATGGAGGGTTTGTGTTCAATCATTTGAACTTTTTTTTTTTATATTCCCTAATAAATGTGACTAACACTGTTATTATTATTATTATTTTCCTCGTTTAGAATATTACATCACAAGTGATTAGCCAATTTGGAGTTACTATTTGTATGAATTTACTAAGCTATTTTTTTTTATAACGATTAGCGATTGAATAAAAA

mRNA sequence

CAAATTAGGACAATTTGATATTTGCGCTAGATTTTTTATAAAAAATTTGATGACTGCCACCTAGTGTGAAATTATATGGTAGTGAGGACATACAAATCATCATGACCTTACTTGAACATGATATATAAGAACTTTAGACTTAATTTTGATGTACATCCTTGAGTTCTAAGACAACATCCAAATTATAAAAGTTGACCGACAAAGCTTACTATGATATATTATGGTGCCTCATTTTGAACTGTTGATAGGTGGTGCCTGGGTTTAATTACCAGCATGGAATGAGATACTCAACGACTGTACCTAATGATCCTGATACTCATGATGATTTCAAACCTACTAACAAACTTGAGAATTCTAGCCTTTCTTTGAGGGATGTTGTTGAACAGGATGTACAGCAAAATCCTGTGATGATTTATATGAAAGGGGTGCCGGATGCTCCTCAATGTGGATTTAGCTCTCTTGCTGTTAGAGTGTTGAATTTATATAACGTACCTTTGAGTGCTAGAAATATCTTGGAAGATGCCGAGCTTAAAAATGCTGTGAAATCCTTTAGCAACTGGCCAACATTTCCCCAGATTTTCATCAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGACTGGAGAATTGAAGGAAAAGCTCAATGATATTGCAGCGAATCAGAAGACTGAATAAGTTCTCAGTCACCAAGTATGAAGAAAGAGATATGGTTAAACCCATCTTCCATGGAGGGTTTGTGTTCAATCATTTGAACTTTTTTTTTTTATATTCCCTAATAAATGTGACTAACACTGTTATTATTATTATTATTTTCCTCGTTTAGAATATTACATCACAAGTGATTAGCCAATTTGGAGTTACTATTTGTATGAATTTACTAAGCTATTTTTTTTTATAACGATTAGCGATTGAATAAAAA

Coding sequence (CDS)

ATGAGATACTCAACGACTGTACCTAATGATCCTGATACTCATGATGATTTCAAACCTACTAACAAACTTGAGAATTCTAGCCTTTCTTTGAGGGATGTTGTTGAACAGGATGTACAGCAAAATCCTGTGATGATTTATATGAAAGGGGTGCCGGATGCTCCTCAATGTGGATTTAGCTCTCTTGCTGTTAGAGTGTTGAATTTATATAACGTACCTTTGAGTGCTAGAAATATCTTGGAAGATGCCGAGCTTAAAAATGCTGTGAAATCCTTTAGCAACTGGCCAACATTTCCCCAGATTTTCATCAAAGGAGAGTTTATTGGAGGATCTGATATCATACTCAATCTGCATCAGACTGGAGAATTGAAGGAAAAGCTCAATGATATTGCAGCGAATCAGAAGACTGAATAA

Protein sequence

MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELKEKLNDIAANQKTE
Homology
[Close]
BLAST of Carg06498 vs. NCBI nr
Match: XP_022956299.1 (monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_022956300.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_023526757.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526758.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 4.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS
Sbjct: 35  MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 94

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG
Sbjct: 95  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 154

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 155 ELKEKLNDIAANQKTE 170

[Close]
BLAST of Carg06498 vs. NCBI nr
Match: XP_022980464.1 (monothiol glutaredoxin-S15, mitochondrial [Cucurbita maxima] >XP_022980465.1 monothiol glutaredoxin-S15, mitochondrial [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-70
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVE DVQQNPVMIYMKGVPDAPQCGFSS
Sbjct: 35  MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVELDVQQNPVMIYMKGVPDAPQCGFSS 94

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG
Sbjct: 95  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 154

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 155 ELKEKLNDIAANQKTE 170

[Close]
BLAST of Carg06498 vs. NCBI nr
Match: XP_004152214.1 (PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis sativus] >KGN52871.1 hypothetical protein Csa_4G004820 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-66
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPN+PDTHDDFKPTNKLENS LSLRDVVEQDV+QNPVMIYMKGVPD PQCGFS+
Sbjct: 36  MRYSTTVPNEPDTHDDFKPTNKLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSA 95

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL LYNVPLSARNILEDAELK+AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ+G
Sbjct: 96  LAVRVLKLYNVPLSARNILEDAELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQSG 155

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 156 ELKEKLNDIAANQKTE 171

[Close]
BLAST of Carg06498 vs. NCBI nr
Match: XP_008454263.1 (PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 3.5e-66
Identity = 126/136 (92.65%), Postives = 133/136 (97.79%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPN+PDTHDDFKPTNKLE+S LSL+DVVEQDV+QNPVMIYMKGVPD PQCGFS+
Sbjct: 36  MRYSTTVPNEPDTHDDFKPTNKLESSGLSLKDVVEQDVRQNPVMIYMKGVPDVPQCGFSA 95

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL LYNVPLSARNILEDAELK+AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ+G
Sbjct: 96  LAVRVLKLYNVPLSARNILEDAELKSAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQSG 155

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 156 ELKEKLNDIAANQKTE 171

[Close]
BLAST of Carg06498 vs. NCBI nr
Match: XP_022153542.1 (monothiol glutaredoxin-S15, mitochondrial [Momordica charantia])

HSP 1 Score: 255.8 bits (652), Expect = 8.5e-65
Identity = 123/136 (90.44%), Postives = 132/136 (97.06%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYST+VPNDPDTH+DFKPTNKLE+S +SL+DVVEQDVQQNPVMIYMKGVPD PQCGFS+
Sbjct: 34  MRYSTSVPNDPDTHEDFKPTNKLESSGISLKDVVEQDVQQNPVMIYMKGVPDLPQCGFSA 93

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVLNLYNVPLSARNILE+ ELK+AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ+G
Sbjct: 94  LAVRVLNLYNVPLSARNILENVELKSAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQSG 153

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKL DIAANQKTE
Sbjct: 154 ELKEKLKDIAANQKTE 169

[Close]
BLAST of Carg06498 vs. TAIR10
Match: AT3G15660.1 (glutaredoxin 4)

HSP 1 Score: 213.8 bits (543), Expect = 6.7e-56
Identity = 101/134 (75.37%), Postives = 121/134 (90.30%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKL-ENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFS 60
           MR+S+TVP+D DTHDDFKPT K+  +S+ SL+D+VE DV+ NPVMIYMKGVP++PQCGFS
Sbjct: 35  MRFSSTVPSDSDTHDDFKPTQKVPPDSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFS 94

Query: 61  SLAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQT 120
           SLAVRVL  YNVP+S+RNILED ELKNAVKSFS+WPTFPQIFIKGEFIGGSDIILN+H+ 
Sbjct: 95  SLAVRVLQQYNVPISSRNILEDQELKNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHKE 154

Query: 121 GELKEKLNDIAANQ 134
           GEL++KL D++ NQ
Sbjct: 155 GELEQKLKDVSGNQ 168

[Close]
BLAST of Carg06498 vs. TAIR10
Match: AT4G04950.1 (thioredoxin family protein)

HSP 1 Score: 107.8 bits (268), Expect = 5.2e-24
Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 0 

Query: 20  TNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNIL 79
           T K      SL D ++  +  + VM++MKG PD P+CGFSS  V+ L   NV   + +IL
Sbjct: 380 TEKGITGEQSLEDRLKALINSSEVMLFMKGSPDEPKCGFSSKVVKALRGENVSFGSFDIL 439

Query: 80  EDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELKEKLND 129
            D E++  +K+FSNWPTFPQ++ KGE IGG DII+ L ++G+LK  L++
Sbjct: 440 TDEEVRQGIKNFSNWPTFPQLYYKGELIGGCDIIMELSESGDLKATLSE 488

[Close]
BLAST of Carg06498 vs. TAIR10
Match: AT3G54900.1 (CAX interacting protein 1)

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-23
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 0 

Query: 18  KPTN-KLENSSLS--LRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLS 77
           KPT  +   S+L+  L+D +E+ V    V+++MKG  D P CGFS+  V++L   NVP  
Sbjct: 56  KPTKFRCSASALTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFE 115

Query: 78  ARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELKEKL 127
             NILE+  L+  +K +SNWPTFPQ++I GEF GG DI L   +TGEL+E++
Sbjct: 116 DVNILENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEV 167

[Close]
BLAST of Carg06498 vs. TAIR10
Match: AT2G38270.1 (CAX-interacting protein 2)

HSP 1 Score: 91.7 bits (226), Expect = 3.9e-19
Identity = 46/128 (35.94%), Postives = 77/128 (60.16%), Query Frame = 0 

Query: 4   STTVPNDPDTHDDFKPT-NKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLA 63
           +T V   P    D + T  +    ++ L +++++ V+++ V+ ++KG   APQCGFS   
Sbjct: 166 NTFVKQTPRKKSDIRLTPGRHVELTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRV 225

Query: 64  VRVLNLYNVPLSARNILEDA---ELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQT 123
           V +L    V     ++L+D     L+  +K++SNWPTFPQIF+KGE +GG DI+ ++++ 
Sbjct: 226 VGILESQGVDYETVDVLDDEYNHGLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYEN 285

Query: 124 GELKEKLN 128
           GEL   LN
Sbjct: 286 GELANILN 293

[Close]
BLAST of Carg06498 vs. TAIR10
Match: AT5G20500.1 (Glutaredoxin family protein)

HSP 1 Score: 44.3 bits (103), Expect = 7.1e-05
Identity = 30/107 (28.04%), Postives = 55/107 (51.40%), Query Frame = 0 

Query: 32  DVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNL--YNVPLSARNILEDAELKNAVK 91
           D V++ +  + ++I+ K     P C  +    R L+   Y V L  R   +   ++ A+ 
Sbjct: 33  DFVKKTISSHKIVIFSKSY--CPYCKKAKSVFRELDQVPYVVELDERE--DGWSIQTALG 92

Query: 92  SFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELKEKLNDIAANQKTE 137
                 T PQ+FI G+ +GGSD  ++ +++GEL  KL  ++ N++ E
Sbjct: 93  EIVGRRTVPQVFINGKHLGGSDDTVDAYESGEL-AKLLGVSGNKEAE 134

[Close]
BLAST of Carg06498 vs. Swiss-Prot
Match: sp|Q8LBK6|GRS15_ARATH (Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GRXS15 PE=1 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 101/134 (75.37%), Postives = 121/134 (90.30%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKL-ENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFS 60
           MR+S+TVP+D DTHDDFKPT K+  +S+ SL+D+VE DV+ NPVMIYMKGVP++PQCGFS
Sbjct: 35  MRFSSTVPSDSDTHDDFKPTQKVPPDSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFS 94

Query: 61  SLAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQT 120
           SLAVRVL  YNVP+S+RNILED ELKNAVKSFS+WPTFPQIFIKGEFIGGSDIILN+H+ 
Sbjct: 95  SLAVRVLQQYNVPISSRNILEDQELKNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHKE 154

Query: 121 GELKEKLNDIAANQ 134
           GEL++KL D++ NQ
Sbjct: 155 GELEQKLKDVSGNQ 168

[Close]
BLAST of Carg06498 vs. Swiss-Prot
Match: sp|Q0JM76|GRXS4_ORYSJ (Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS4 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-44
Identity = 84/131 (64.12%), Postives = 109/131 (83.21%), Query Frame = 0 

Query: 4   STTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAV 63
           ST V  DPDTH DF+PT K  +S++S  D+V QD+++NPV+IYMKG PDAP+CGFS+LAV
Sbjct: 52  STRVAADPDTHQDFQPTTK--SSNMSFDDIVSQDIKENPVLIYMKGYPDAPRCGFSALAV 111

Query: 64  RVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELK 123
           RVL  Y+VP+SAR+IL D +LK +VK+ +NWPTFPQIFIKGEF+GGSDIIL++HQ G+LK
Sbjct: 112 RVLKQYDVPISARDILGDLKLKESVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQKGQLK 171

Query: 124 EKLNDIAANQK 135
           + L DIA  ++
Sbjct: 172 DVLGDIAQKRE 180

[Close]
BLAST of Carg06498 vs. Swiss-Prot
Match: sp|Q0JQ97|GRXS1_ORYSJ (Monothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS1 PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 82/127 (64.57%), Postives = 107/127 (84.25%), Query Frame = 0 

Query: 4   STTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAV 63
           ST V  DPDTH DF+PT+K  +S++S  D+V QD+++NPV+IYMKG P++P CGFS+LAV
Sbjct: 52  STRVAADPDTHQDFQPTSK--SSNMSFDDIVAQDIKENPVLIYMKGFPESPMCGFSALAV 111

Query: 64  RVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELK 123
           +VL LY+VP+SAR+IL D +LK  VK+ +NWPTFPQIFIKGEF+GGSDIIL++HQ G+LK
Sbjct: 112 KVLKLYDVPISARDILGDLKLKECVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQKGQLK 171

Query: 124 EKLNDIA 131
           + L DIA
Sbjct: 172 DVLGDIA 176

[Close]
BLAST of Carg06498 vs. Swiss-Prot
Match: sp|Q555C8|GLRX5_DICDI (Monothiol glutaredoxin-5, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=grx5 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.7e-25
Identity = 49/115 (42.61%), Postives = 82/115 (71.30%), Query Frame = 0 

Query: 22  KLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILED 81
           K E+   +L D VE  V ++P ++YMKG+P+ P+CGFS+ AVR+L       ++ N+L++
Sbjct: 30  KSESYKKALED-VETQVAESPCILYMKGIPERPECGFSNTAVRILQAEGAVFTSYNVLKN 89

Query: 82  AELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTGELKEKLNDIAANQKTE 137
            +++ AVK F +WPT PQ+++KG+FIGG+DI++ L+++GEL + LN+    +K E
Sbjct: 90  NDMREAVKEFGDWPTIPQLYVKGQFIGGADILMGLYKSGELSKLLNEAGVVKKDE 143

[Close]
BLAST of Carg06498 vs. Swiss-Prot
Match: sp|P73056|YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1846 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-24
Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 34  VEQDVQQNPVMIYMKGVPDAPQCGFSSLAVRVLNLYNVPLSARNILEDAELKNAVKSFSN 93
           ++Q V  N VM++MKG    PQCGFS+  V++LN+  +P    ++L DAE++  +K +SN
Sbjct: 9   IDQLVTANKVMVFMKGTKLMPQCGFSNNVVQILNMLGIPFETLDVLADAEIRQGIKEYSN 68

Query: 94  WPTFPQIFIKGEFIGGSDIILNLHQTGELKEKL 127
           WPT PQ+++ GEF+GGSDI++ L+Q GEL+E L
Sbjct: 69  WPTIPQVYVNGEFVGGSDIMIELYQNGELQEML 101

[Close]
BLAST of Carg06498 vs. TrEMBL
Match: tr|A0A0A0KYD9|A0A0A0KYD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004820 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPN+PDTHDDFKPTNKLENS LSLRDVVEQDV+QNPVMIYMKGVPD PQCGFS+
Sbjct: 36  MRYSTTVPNEPDTHDDFKPTNKLENSGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSA 95

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL LYNVPLSARNILEDAELK+AVKSFS+WPTFPQIFIKGEFIGGSDIILNLHQ+G
Sbjct: 96  LAVRVLKLYNVPLSARNILEDAELKSAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQSG 155

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 156 ELKEKLNDIAANQKTE 171

[Close]
BLAST of Carg06498 vs. TrEMBL
Match: tr|A0A1S3BXP4|A0A1S3BXP4_CUCME (monothiol glutaredoxin-S15, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494718 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.3e-66
Identity = 126/136 (92.65%), Postives = 133/136 (97.79%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPN+PDTHDDFKPTNKLE+S LSL+DVVEQDV+QNPVMIYMKGVPD PQCGFS+
Sbjct: 36  MRYSTTVPNEPDTHDDFKPTNKLESSGLSLKDVVEQDVRQNPVMIYMKGVPDVPQCGFSA 95

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL LYNVPLSARNILEDAELK+AVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQ+G
Sbjct: 96  LAVRVLKLYNVPLSARNILEDAELKSAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQSG 155

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKLNDIAANQKTE
Sbjct: 156 ELKEKLNDIAANQKTE 171

[Close]
BLAST of Carg06498 vs. TrEMBL
Match: tr|A0A2N9G2J0|A0A2N9G2J0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21432 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPNDPDTH+DFKPTNKL++S LSL DVVEQDV+ NPVMIYMKGVPD PQCGFSS
Sbjct: 63  MRYSTTVPNDPDTHEDFKPTNKLDSSGLSLNDVVEQDVKDNPVMIYMKGVPDFPQCGFSS 122

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL  Y+VPLSARNILED ELK+AVK+FS+WPTFPQIFIKGEFIGGSDIILNLHQTG
Sbjct: 123 LAVRVLKQYDVPLSARNILEDPELKSAVKTFSHWPTFPQIFIKGEFIGGSDIILNLHQTG 182

Query: 121 ELKEKLNDIAANQK 135
           ELKEKL D+AANQ+
Sbjct: 183 ELKEKLKDVAANQQ 196

[Close]
BLAST of Carg06498 vs. TrEMBL
Match: tr|A0A2I4F7H6|A0A2I4F7H6_9ROSI (monothiol glutaredoxin-S15, mitochondrial OS=Juglans regia OX=51240 GN=LOC108996269 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 115/134 (85.82%), Postives = 128/134 (95.52%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVP+DPDTH+DF+PTNKLE+S LSL+DVVEQDV++NPVMIYMKGVP+ PQCGFSS
Sbjct: 31  MRYSTTVPSDPDTHEDFRPTNKLESSPLSLKDVVEQDVKENPVMIYMKGVPEFPQCGFSS 90

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL  YNVPLSARNILE+ ELK+AVKSFSNWPTFPQIFIKGEFIGGSDIILN+HQTG
Sbjct: 91  LAVRVLKQYNVPLSARNILENPELKSAVKSFSNWPTFPQIFIKGEFIGGSDIILNMHQTG 150

Query: 121 ELKEKLNDIAANQK 135
           ELKEK+ DIAANQ+
Sbjct: 151 ELKEKVKDIAANQE 164

[Close]
BLAST of Carg06498 vs. TrEMBL
Match: tr|A0A2C9W338|A0A2C9W338_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G117000 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 113/136 (83.09%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 1   MRYSTTVPNDPDTHDDFKPTNKLENSSLSLRDVVEQDVQQNPVMIYMKGVPDAPQCGFSS 60
           MRYSTTVPNDPDTH+DF+P NKLE+S +SL+D+VEQDV+ NPVMIYMKGVPD PQCGFSS
Sbjct: 36  MRYSTTVPNDPDTHEDFQPNNKLESSGMSLKDIVEQDVKDNPVMIYMKGVPDFPQCGFSS 95

Query: 61  LAVRVLNLYNVPLSARNILEDAELKNAVKSFSNWPTFPQIFIKGEFIGGSDIILNLHQTG 120
           LAVRVL  YN+PLSARNILED ELK+AVKSFSNWPTFPQIFIKGEFIGGSDIILN+HQ+G
Sbjct: 96  LAVRVLKHYNIPLSARNILEDPELKSAVKSFSNWPTFPQIFIKGEFIGGSDIILNMHQSG 155

Query: 121 ELKEKLNDIAANQKTE 137
           ELKEKL D+A +QK+E
Sbjct: 156 ELKEKLQDVATSQKSE 171

The following BLAST results are available for this feature:
BLAST of Carg06498 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956299.14.7e-71100.00monothiol glutaredoxin-S15, mitochondrial [Cucurbita moschata] >XP_022956300.1 m... [more]
XP_022980464.13.0e-7099.26monothiol glutaredoxin-S15, mitochondrial [Cucurbita maxima] >XP_022980465.1 mon... [more]
XP_004152214.11.5e-6693.38PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis sativus] >KGN52871... [more]
XP_008454263.13.5e-6692.65PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Cucumis melo][more]
XP_022153542.18.5e-6590.44monothiol glutaredoxin-S15, mitochondrial [Momordica charantia][more]
BLAST of Carg06498 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15660.16.7e-5675.37glutaredoxin 4[more]
AT4G04950.15.2e-2445.87thioredoxin family protein[more]
AT3G54900.13.4e-2346.43CAX interacting protein 1[more]
AT2G38270.13.9e-1935.94CAX-interacting protein 2[more]
AT5G20500.17.1e-0528.04Glutaredoxin family protein[more]
BLAST of Carg06498 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LBK6|GRS15_ARATH1.2e-5475.37Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GRX... [more]
sp|Q0JM76|GRXS4_ORYSJ1.9e-4464.12Monothiol glutaredoxin-S4, mitochondrial OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q0JQ97|GRXS1_ORYSJ1.3e-4364.57Monothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q555C8|GLRX5_DICDI7.7e-2542.61Monothiol glutaredoxin-5, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=... [more]
sp|P73056|YC64L_SYNY32.9e-2448.39Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain P... [more]
BLAST of Carg06498 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KYD9|A0A0A0KYD9_CUCSA1.0e-6693.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004820 PE=4 SV=1[more]
tr|A0A1S3BXP4|A0A1S3BXP4_CUCME2.3e-6692.65monothiol glutaredoxin-S15, mitochondrial OS=Cucumis melo OX=3656 GN=LOC10349471... [more]
tr|A0A2N9G2J0|A0A2N9G2J0_FAGSY1.1e-6086.57Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21432 PE=4 SV=1[more]
tr|A0A2I4F7H6|A0A2I4F7H6_9ROSI1.9e-6085.82monothiol glutaredoxin-S15, mitochondrial OS=Juglans regia OX=51240 GN=LOC108996... [more]
tr|A0A2C9W338|A0A2C9W338_MANES1.9e-6083.09Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G117000 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015036disulfide oxidoreductase activity
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR033658GRX_PICOT-like
IPR014434Monothiol_GRX
IPR004480Monothiol_GRX-rel
IPR002109Glutaredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0015036 disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06498-RACarg06498-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 33..128
e-value: 4.5E-33
score: 115.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR10293:SF54SUBFAMILY NOT NAMEDcoord: 4..132
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 43..107
e-value: 6.1E-17
score: 61.5
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 31..133
score: 25.277
IPR004480Monothiol glutaredoxin-relatedTIGRFAMTIGR00365TIGR00365coord: 32..127
e-value: 5.5E-38
score: 127.1
IPR004480Monothiol glutaredoxin-relatedPANTHERPTHR10293GLUTAREDOXIN-RELATED PROTEINcoord: 4..132
IPR014434Monothiol glutaredoxinPIRSFPIRSF005894Monothiol_GRXcoord: 24..134
e-value: 9.4E-40
score: 132.9
IPR033658Glutaredoxin, PICOT-likeCDDcd03028GRX_PICOT_likecoord: 34..123
e-value: 1.55751E-51
score: 159.581
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 29..129

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06498Csa4G004820Cucumber (Chinese Long) v2carcuB0128
Carg06498MELO3C017902Melon (DHL92) v3.5.1carmeB0127
Carg06498CSPI04G01390Wild cucumber (PI 183967)carcpiB0133
Carg06498Cucsa.096600Cucumber (Gy14) v1carcgyB0141
Carg06498CmaCh14G013360Cucurbita maxima (Rimu)carcmaB0154
Carg06498CmaCh01G001310Cucurbita maxima (Rimu)carcmaB0157
Carg06498CmoCh01G001390Cucurbita moschata (Rifu)carcmoB0166
Carg06498CmoCh14G013640Cucurbita moschata (Rifu)carcmoB0163
Carg06498Lsi07G004810Bottle gourd (USVL1VR-Ls)carlsiB109
Carg06498Cp4.1LG03g13760Cucurbita pepo (Zucchini)carcpeB0176
Carg06498Cp4.1LG02g14860Cucurbita pepo (Zucchini)carcpeB0175
Carg06498CsGy4G001280Cucumber (Gy14) v2carcgybB0127
Carg06498MELO3C017902.2Melon (DHL92) v3.6.1carmedB0131
Carg06498CsaV3_4G001380Cucumber (Chinese Long) v3carcucB0137
Carg06498Bhi01G002780Wax gourdcarwgoB0145
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06498Carg04241Silver-seed gourdcarcarB139
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06498Watermelon (97103) v2carwmbB0126
Carg06498Watermelon (97103) v2carwmbB0127
Carg06498Wax gourdcarwgoB0150
Carg06498Silver-seed gourdcarcarB143
Carg06498Cucurbita maxima (Rimu)carcmaB0160
Carg06498Cucurbita moschata (Rifu)carcmoB0169
Carg06498Cucurbita pepo (Zucchini)carcpeB0173
Carg06498Wild cucumber (PI 183967)carcpiB0135
Carg06498Cucumber (Chinese Long) v2carcuB0130
Carg06498Cucumber (Chinese Long) v3carcucB0139
Carg06498Bottle gourd (USVL1VR-Ls)carlsiB106
Carg06498Melon (DHL92) v3.5.1carmeB0121
Carg06498Melon (DHL92) v3.6.1carmedB0130
Carg06498Melon (DHL92) v3.6.1carmedB0124
Carg06498Watermelon (Charleston Gray)carwcgB0117
Carg06498Watermelon (Charleston Gray)carwcgB0121
Carg06498Watermelon (97103) v1carwmB0117
Carg06498Watermelon (97103) v1carwmB0120