Carg06495 (gene) Silver-seed gourd

NameCarg06495
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCytochrome C oxidase subunit 5b
LocationCucurbita_argyrosperma_scaffold_051 : 866234 .. 872026 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTCCAAAAGCATAGAAACTGAAGAGGGCGAGAGAGTGAAGAAAGAAAGAGCCAAATTCGCCGTCCTAGTGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGGTAGATCTTGCTGTTTTATTTGGATTTTATAGTATGTCTCTGTATGTATGAAGAATCTATGATACGATTGCGAATCTGGAATTGGTCGTTTGGTTGTTAATCGATTAGAATGTATACGCGTTGAATGTTATGTATTGTGCAGTCTGTGTCACTGTATGTGTGAATCTACTATTGGTCTCGTGGTTATTTATTAATTAGAATGTATGCTCGTGGATTGTTAGTGTTTTACAGTCTGTTTCGCTGTATGTGTGAATCTATAATATGAGCACGAATGTGGTCTTGATGTCCTGTGGTTAAATTTATTTTTTTAGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGTGAAATTTATTGTATTTCTTGATTACCTGGATCTCTTTCCGTGGTTCCTTTCCCCCACCCCATTTTATGATGTGAAATGTATCGGACTAAGGAGTAGTTTAAAATTTATACCTCAATTTATCGAATCATTTTCATTTTTGAACTCAGTCTGGTATTGGAATTTTCAGTTTCGGAAAGGCAGGTTAAAATAATAGATTCGTTGATCGATTCATTTTCATTTTCATTTTCAAACTCTCTGGCTTATGTTAATATTTTGATAGGCTGGCCTCTGATGGATGTATTTCTCATTTGGATGTGAGTCTTATTTCGGTTCGTTTAACCTTTGCAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTTGCGATTAATTTTATCTTCTCTTGTTTTTGTTTGTTGGAAGTAACTCAGATGCTTTAGCTTTTATCAAGGTTCATTCCATGTAGCTTTCAAGGCATGACGAGACAGCAATATTTAATGAGTTTATTACTTTCACTTGAATTTAAGCTGCAGTTTTGTTATGCTATCAGGATATCTTCTCTGGTTAAACTGTTTCATTGAGGTATCAGACACCCAAGATATTTGGAAAGTAATTGTTCTGAATTTTTGTTTCCAGTCCTTTTTCCCGTTCCTCTTCTGGTTATCCATTCCATATCTTTCTTTCATTCTCCATGGCATATCATAACTTAATATTGCAGTATAATTAACAATACCTAGGAAGGTTCTATTTTCTTTTAAAATATGTTTTAAGAATCCAAGCTTTGATTCAGAAAAATGAAAGAAAGAACATATAAAAGCATACAGTAAAAGAAAGAACATTAAGACCATACAAAAAAGCTATGTCCACAGAGAAAAGAACTCCAATTCAAAATAATCAAATAAAGCTCATTATACAGATAGGTCAAGGAACAGGACACTAAGATAAGGAGTTCTTTCCTCTTTATCGAACGGAAAATCTCCCCAACTGGTTTGAATTAGAAATAAGTTAAAATGCTAAATGCTATGACTTTGTGCTACATTTAGAAGCAAGAAAATATGCCAAGTTCCTTAATATCTGTCTCATCTCTAACATTATCTCTAAGATTTTATTATTCTGCACTAGCCTGCTAACCTAAATCAAATCTGGAGAATAAAGTCATTCAAAGAATTTTAGGCTTCCTTTTAAGGCTATAACCAACAATCTTAGGCTTCCTTTTGCATCTTGAATCAAGTCTGTTCCTTTTGAACCATTTTGATTTTGTCTGGTTTAGGTGGTTTTTTGTTTTGGAAAGTTAAACGCTTGTGGTTGGCTGCAAAAACCGTCTCTTTTGTTTCCTTTCTCTGAAGTCTGAACTTTAAACTGTTGATCAATTGTGTCAAAGCACATGAATTGGCGCTTGAAATTCTCAGGGTTGTGATCTTTCCATAATTTTTGGGTCAGTTCCTCCTTCACTTTGATGTTTTTTCGGGTACTTCAAAAGATATGCAATCTCTCTGTAGTTTGGATATGCTTGGAATATAACCAATCAATGACAGAATGCCTTTTCATTTTGGATATGTTAGTTTCAACTCGTTGTGCAATTTGATTAGAAAATTTTCAACTCAATTTGTAACTGGTCAATGGCGGAATGCCTTTTGGTTTTGGACATATCAGTTTCAACTGTTTGCACAATTTCGTTAGAAACTTTTCACCTCGTTTGGAAGTTAATTTTGTAATTGGACAGTTGTTTGAGGAAATAATCTTATCATATTTTGTTGTTTTAAGAATGTATCAAGAAGTGGCCACATCGGTTGAGGGGCCTGGGTGTCAAACCTTAGCTCAGACCTTTGGTTGAATCTCCTTAGTGTCTTTAAAAGTTGGAATATAAGTGCATGAAGTAAGGTTTCTCTCCTAATCTTTGATGCACCAAGATTAGCATATAGAATCCTAAACATTAAAGGGTGAATGAAACTGAAGCCGAGAGTTCGGAAAACTCTCTGACTGAAGCACCAATATTCAATTTACATAAAAAAAAAAAAAAAAAAAAAAAGTCCAGAAAACTCTACCTATCTGTTGGATTGATATGACAACCCTAGAAGGGGGTGAATAGGGTGTAAAAAGAATATATTTTAGTCCGCTTAATTTTACAAATGATCACACTTTTTTAGAGCAATTAAAAATTGCCAATTAACACGAGAAGTACAAAAATAATAATACGATTCAAAACAATAAAAAATTATGAAAACTTAGTGATTGAAAAGGCATAACAATAAAAAATTATGCTTAATTTTTATTTTAGTCATAACTTCTTCGTTTTAGCTCCAATTGAGTTATTCCAAAGGTGTTGGAATCGTGATTCCAAGCTCTACACTATGTACACTTCAAAACACTAAAATTATTAGTAATTAGGAGCATGTTATCATCAAAATATTAATTAATTAATTTGAGATTAAGAGCCAAAAAGTCAACACTATTGTCAATTAGAGATAGAACAGTTCAAGAAGAGGTTTAGTGGATTTTCCATCCTTTTTTCTGGAAAGAATGGTTACATTGTTTAAAACAAAGAGGAGAGATCCTTCTCTGAACGCAATCATATTGTATACTCTTGGACGAAAGCTGACTAAAGATATACCTTGCAATTTTTAGTAAGTTTGGGTCTGCAAAACCTTTTTTATATAACTCCAAGATAATAGAGGGGTTTTTTTTTAAAACCACAATATAATAAACAGAGGGAACTGAAAAGGCACTTGAATTGGAAGTTTGAACTCTTGGAATCCTGGTTTAAGGAGACATGAAGATCGTTCAACATGATAATAAGAATGATTCTCACTTCGACTTCTCTCTGTTGCTGTTCTTTCTGTTATCTTGAAATGCAACTTTTGATAATGAATAAAGATTAGCCTCATCCCGTAAGTCTTAATTCAACGATACAACCACCTACGTTGCACTGAAGGTAGTGTTTATGTTATAAGCTATTCTAACTGAAGCACTCTTACCCAATTGGAACAAGAGACTTGTAATTATTTAGCACTAGAGCAAGCTTATGACTGTCGTCCACCATCATGGGCCTTTAGTGGAAGAATAGGAGCATACCTTATGAATTGCCTATTGCACTGCTTCATATTTGCGACCAATCACAATCTGCCAGATATCTTCCCTGGGAGATTTTCATAACCAATTGTGAGGAAGGTTAATGTTTTTCCTTTTGATATTTGTTATGTTTAAACCTTCATTCATAAGAGTGACCAGAGACCACATCAATCTAACTAGGTGATTACTCCTTTAGTCATTGGAACCTTCCCAAAAGGAATTCCTAATGTCTTTCTCTAAAATTCCATCTCTTCAGAGGGAATGTGTTAGAGACTGAAAGAAAGTATCAAGGGAGGTTGGTGAGGATTTTCTTTTTCTTTTTCTTTATCAAAAGATGTCTTGTTGTCTCTCCTATCTCGACAGGCACAATAATTCTTCAGTTAATATAATTGTTGTTTTCTATGAGGCCATTGATGATATCTGGTTAACATCACTGAAGGTTGAAGAGACTGAGAACTCCAGCAGATTTTCTTTGCGAAATTACCATGAATATAAATGCCTTGATTTTCACTATCCTGCTGATAGAACATCAACTTTGGAGAAACAAATCTTAGGATGAGGAATCTTCTCCCTTCCCAATATTTTTTATTGTCTTGTTTCTCATTTGAAAATAGTGTTGTTTTAGTGCATCTGTGATTCAGTATGCTAAGCAGATCTATGGTGTATTGCTGCCATCTAAGTGGGGTTTTGTTGAGGTTCCTCCCTTGTTATTAAATTTCTGTTTAGTTCGTACAAGTCTATGACTTTGACTATTCGCTTTTATGTTCTTATAAATTAAAAAAAACAACACTTTTATGTAGTTATTGATTTCCTGATCAGTTGTGTAATTATCTAAGGCTTTTCTTTTCTTCTGTATGAAAAAAGGCTGTAACTTTCTTTGCGTTTTATGGAGTACGTGCTTCACACGTAGAAATACTGTGTTAGGGTATGTGAATGAAAGAAGGATTTTCTTGCATGACTTATTTCTGGGAGAAATCTTAATACTTTTTTATTTCTTTAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGGTGGGTACTCGCAATCTCTCCTTTTCCATGCTTTTTCATAATTTTTGTGCGAGTCTAACAAAATGTTACATAGGCAAATTCCGTGTTCTATTACACATAAGAATTTCAATCTTCTGATGCATACTTTTCAATTGTAGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGGTGAGTATTTATTTTAATTTATTATGTTTTGTTGACATGGTAGAAAGCTGGATATTTTTCCCCATTGTGGGTGGGTGGGGGCAAACTCTGCAACCTTACCTAATTTTCACGATAGTAAAAGGTCGGCATTCTTCAACCAAGCATATGCAGAAGTATAGCTCCATTGGAGGGAAAGGACACAATAGTGAAAATACTAAAATGTCAATACCATAACTGTGAAAAGTGTTTTTTAACTAATCTTGCAAATAGTATTCAATTTCTTTTTTGATATTTGTTGCCCACTTAACCAAAAATGCTTAGATCAAAAGATTGTTTTTTGAGAAATAAATTATTGACAATATTTTCATATGCGCATGCGCGCACACACATATATATGTACAAGTGTTCCACTAGTAAACCTACTCTAACATGGCCTTGCAACAATAGGGATTAGAATTTCTCTATCTGCCTCTCTTCCATGTTATCCCACTTTCTCCTTTGATGGAATGGGCTACTGGTGTCCAAAATTACTTTGCAGAATTTTCCTAATCGTAACTTGTGTTCGCAGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGGAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTAATGGTCTTTGTTTTTTTTTTTTT

mRNA sequence

ATATTTCCAAAAGCATAGAAACTGAAGAGGGCGAGAGAGTGAAGAAAGAAAGAGCCAAATTCGCCGTCCTAGTGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGGAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTAATGGTCTTTGTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGA

Protein sequence

MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSAGTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
BLAST of Carg06495 vs. NCBI nr
Match: XP_022956147.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_022980065.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLK LKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEA LEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

BLAST of Carg06495 vs. NCBI nr
Match: XP_023528417.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 2.2e-94
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLLASQLK LKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  GTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           GTGVKKVEDVMPIATGHEREELEA L+GKDILDINHPVGPFGTKEAPAVIKSYYDERLVG
Sbjct: 61  GTGVKKVEDVMPIATGHEREELEASLQGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Sbjct: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 173

BLAST of Carg06495 vs. NCBI nr
Match: XP_004151243.1 (PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 hypothetical protein Csa_3G538670 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 8.0e-84
Identity = 152/174 (87.36%), Postives = 163/174 (93.68%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LK LKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK VEDVMPIATGHEREELEA LEGKDILDINHP+GPFGTKEAPAVIKSYYDER+V
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           GCPGGE EDEHDV+WFRLRK VPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Sbjct: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

BLAST of Carg06495 vs. NCBI nr
Match: XP_022998035.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 6.7e-83
Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+SQLK LKSLPSSSTPASAPLGCIS+ATRL A+S VS S+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTPASAPLGCISQATRLAASSRVSHSSSVSLFARHYASDSA 60

Query: 61  GTGV-KKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+ KK EDV+PI TGHEREELEA LEG+DILDINHPVGPFGTKE PAVIKSYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDG+GDDDH H
Sbjct: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

BLAST of Carg06495 vs. NCBI nr
Match: XP_023523890.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.4 bits (799), Expect = 9.7e-82
Identity = 152/174 (87.36%), Postives = 160/174 (91.95%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+SQLK LKSLPSSST ASAPLGCIS+ATRL A+S VS S  VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTSASAPLGCISQATRLAASSRVSHSPSVSLFARHYASDSA 60

Query: 61  GTGV-KKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+ KK EDV+PI TGHEREELEA LEG+DILDINHPVGPFGTKE PAVIKSYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDG+GDDDH H
Sbjct: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

BLAST of Carg06495 vs. TAIR10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-53
Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATR-LG---AASHVSPSAPVSLFARYYA 60
           MWRR+++SQLK L    ++   A++P   I+  TR +G   AA+  + SA   +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSAGT-GVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           SDS  T   KKVEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTKEAPA++KSYYD
Sbjct: 61  SDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH 174
           +R+VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Sbjct: 121 KRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

BLAST of Carg06495 vs. TAIR10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-52
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSP-SAPVSLFARYYASDS 60
           MWRR+++S LK + ++ S + P+      + ++T L  ++  S   A  S+F+R   S +
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCR--HAVVESTHLSLSTRASSIPAYSSIFSRLIGSAA 60

Query: 61  AGTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERL 120
           A T VKK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTKEAPAV+KSYYD R+
Sbjct: 61  ADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRI 120

Query: 121 VGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH 172
           VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG GDD H
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDDHH 171

BLAST of Carg06495 vs. TAIR10
Match: AT1G52710.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 5.8e-28
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 82  LEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDV 141
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGEGED HDVVWF L K  
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 142 PHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH 174
             ECPVCSQYF        G PDG GDD DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9LW15|CX5B1_ARATH (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-52
Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATR-LG---AASHVSPSAPVSLFARYYA 60
           MWRR+++SQLK L    ++   A++P   I+  TR +G   AA+  + SA   +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSAGT-GVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           SDS  T   KKVEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTKEAPA++KSYYD
Sbjct: 61  SDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH 174
           +R+VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Sbjct: 121 KRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9SSB8|CX5B2_ARATH (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSP-SAPVSLFARYYASDS 60
           MWRR+++S LK + ++ S + P+      + ++T L  ++  S   A  S+F+R   S +
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCR--HAVVESTHLSLSTRASSIPAYSSIFSRLIGSAA 60

Query: 61  AGTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERL 120
           A T VKK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTKEAPAV+KSYYD R+
Sbjct: 61  ADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRI 120

Query: 121 VGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH 172
           VGCPGGEGEDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG GDD H
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDDHH 171

BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9SSS5|CX5BL_ARATH (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 82  LEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDV 141
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGEGED HDVVWF L K  
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 142 PHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH 174
             ECPVCSQYF        G PDG GDD DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

BLAST of Carg06495 vs. Swiss-Prot
Match: sp|P29505|COX5_DICDI (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 8.3e-08
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0

Query: 93  DINHPV--GPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQ 152
           D  H V  G FGT ++P +++S +  R+V C GG+GE EHD+++  + +  P  C  C Q
Sbjct: 46  DFGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQ 105

Query: 153 YFVLEVVGPGG 162
            F L+ +   G
Sbjct: 106 VFKLKHISSEG 115

BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A0A0LDH6|A0A0A0LDH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 5.3e-84
Identity = 152/174 (87.36%), Postives = 163/174 (93.68%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LK LKSLPSSSTPASAPLGCIS+A RL AASH+SPS+ + LFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  GTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120
            TG+KK VEDVMPIATGHEREELEA LEGKDILDINHP+GPFGTKEAPAVIKSYYDER+V
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           GCPGGE EDEHDV+WFRLRK VPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Sbjct: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A1S4DWP7|A0A1S4DWP7_CUCME (LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489917 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70
Identity = 143/189 (75.66%), Postives = 153/189 (80.95%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRRLL+S LK LKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  GTGV-KKVEDVMPIATGHEREELEALLE-----------GKDILDINHPVGP----FGTK 120
            TG+ KKVEDVMPIATGHEREELEA LE            K+ +      GP        
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLELFNDPRLAFLLWKEPVTSIASYGPNLILVFLX 120

Query: 121 EAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPD 174
           EAPAVIKSYYDER+VGCPGGE EDEHDVVWFRLRK VPHECPVCSQYFVLEVVGPGGSPD
Sbjct: 121 EAPAVIKSYYDERIVGCPGGEDEDEHDVVWFRLRKGVPHECPVCSQYFVLEVVGPGGSPD 180

BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A0A0KYD4|A0A0A0KYD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 5.3e-68
Identity = 136/179 (75.98%), Postives = 155/179 (86.59%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPAS-APLGCISKATRL--GAASHVSPSAPVSLFARYYAS 60
           MWRRLL+ +L  LK LPSSST AS AP G IS A+RL   A+S VSPS  VSLFAR++++
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  DSA-GTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           ++A   G+KK VEDVMPIATGHEREELEA LEG+DILDI++PVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFG-DDDHHH 174
           ER+VGCPGGEG+DEHDVVWFRL+K  PHECPVC+QYF LEVVGPGGSPDG+G DDDHHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179

BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A1S3BYC3|A0A1S3BYC3_CUCME (cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494723 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 9.0e-68
Identity = 135/178 (75.84%), Postives = 152/178 (85.39%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPAS-APLGCISKATRL--GAASHVSPSAPVSLFARYYAS 60
           MWRRLL+  L  LK LPSSST AS AP G IS A+RL   A+S VSPS  VSLFAR++++
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  DSA-GTGVKK-VEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYD 120
           ++A   G++K VEDVMPIATGHEREELEA LEG+DILDIN+PVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           ER+VGCPGGEGEDEHDV+WFRLRK  P ECPVC+QYF LEVVGPGGSPDG+GDDD HH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 178

BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A2C9W1M5|A0A2C9W1M5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G117400 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.3e-62
Identity = 121/173 (69.94%), Postives = 141/173 (81.50%), Query Frame = 0

Query: 1   MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60
           MWRR L+SQ   LK+L SS+  ASA +   +++ R    S +SPS   SLF RY+++DS 
Sbjct: 1   MWRRSLSSQ---LKTLASSNLSASAAIR-FARSNR----SFISPSPSASLFHRYFSADSD 60

Query: 61  GTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVG 120
           G+  K+VEDVMPIATGHEREELEA L+GKD+L+INHPVGPFGTKEAPAV+KSYYD+R+VG
Sbjct: 61  GSVKKRVEDVMPIATGHEREELEAALQGKDVLEINHPVGPFGTKEAPAVVKSYYDKRIVG 120

Query: 121 CPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH 174
           CPGGEGEDEHDVVWF L K  PHECPVCSQYFVLEVVGPGG PDG GDD+ HH
Sbjct: 121 CPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDEDHH 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022956147.11.0e-9498.84cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
XP_023528417.12.2e-9498.27cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pep... [more]
XP_004151243.18.0e-8487.36PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >K... [more]
XP_022998035.16.7e-8387.93cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima][more]
XP_023523890.19.7e-8287.36cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pep... [more]
Match NameE-valueIdentityDescription
AT3G15640.11.0e-5360.56Rubredoxin-like superfamily protein[more]
AT1G80230.11.2e-5259.54Rubredoxin-like superfamily protein[more]
AT1G52710.15.8e-2860.22Rubredoxin-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LW15|CX5B1_ARATH1.9e-5260.56Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9SSB8|CX5B2_ARATH2.1e-5159.54Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9SSS5|CX5BL_ARATH1.0e-2660.22Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|P29505|COX5_DICDI8.3e-0836.62Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LDH6|A0A0A0LDH6_CUCSA5.3e-8487.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1[more]
tr|A0A1S4DWP7|A0A1S4DWP7_CUCME1.1e-7075.66LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial OS=Cucumis... [more]
tr|A0A0A0KYD4|A0A0A0KYD4_CUCSA5.3e-6875.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1[more]
tr|A0A1S3BYC3|A0A1S3BYC3_CUCME9.0e-6875.84cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A2C9W1M5|A0A2C9W1M5_MANES4.3e-6269.94Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G117400 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR036972Cyt_c_oxidase_su5b_sf
IPR002124Cyt_c_oxidase_su5b
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0015992 proton transport
cellular_component GO:0005740 mitochondrial envelope
cellular_component GO:0045277 respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06495-RACarg06495-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002124Cytochrome c oxidase, subunit VbPFAMPF01215COX5Bcoord: 74..160
e-value: 1.4E-16
score: 60.3
IPR002124Cytochrome c oxidase, subunit VbPANTHERPTHR10122CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIALcoord: 9..172
IPR002124Cytochrome c oxidase, subunit VbPRODOMPD007270coord: 74..154
e-value: 3.0E-31
score: 335.0
IPR002124Cytochrome c oxidase, subunit VbPROSITEPS51359COX5B_2coord: 62..161
score: 21.188
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3DG3DSA:2.60.11.10coord: 64..157
e-value: 4.4E-29
score: 102.3
NoneNo IPR availablePANTHERPTHR10122:SF8SUBFAMILY NOT NAMEDcoord: 9..172
NoneNo IPR availableSUPERFAMILYSSF57802Rubredoxin-likecoord: 66..160

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06495Carg04245Silver-seed gourdcarcarB139