Carg06495 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTCCAAAAGCATAGAAACTGAAGAGGGCGAGAGAGTGAAGAAAGAAAGAGCCAAATTCGCCGTCCTAGTGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGGTAGATCTTGCTGTTTTATTTGGATTTTATAGTATGTCTCTGTATGTATGAAGAATCTATGATACGATTGCGAATCTGGAATTGGTCGTTTGGTTGTTAATCGATTAGAATGTATACGCGTTGAATGTTATGTATTGTGCAGTCTGTGTCACTGTATGTGTGAATCTACTATTGGTCTCGTGGTTATTTATTAATTAGAATGTATGCTCGTGGATTGTTAGTGTTTTACAGTCTGTTTCGCTGTATGTGTGAATCTATAATATGAGCACGAATGTGGTCTTGATGTCCTGTGGTTAAATTTATTTTTTTAGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGTGAAATTTATTGTATTTCTTGATTACCTGGATCTCTTTCCGTGGTTCCTTTCCCCCACCCCATTTTATGATGTGAAATGTATCGGACTAAGGAGTAGTTTAAAATTTATACCTCAATTTATCGAATCATTTTCATTTTTGAACTCAGTCTGGTATTGGAATTTTCAGTTTCGGAAAGGCAGGTTAAAATAATAGATTCGTTGATCGATTCATTTTCATTTTCATTTTCAAACTCTCTGGCTTATGTTAATATTTTGATAGGCTGGCCTCTGATGGATGTATTTCTCATTTGGATGTGAGTCTTATTTCGGTTCGTTTAACCTTTGCAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTTGCGATTAATTTTATCTTCTCTTGTTTTTGTTTGTTGGAAGTAACTCAGATGCTTTAGCTTTTATCAAGGTTCATTCCATGTAGCTTTCAAGGCATGACGAGACAGCAATATTTAATGAGTTTATTACTTTCACTTGAATTTAAGCTGCAGTTTTGTTATGCTATCAGGATATCTTCTCTGGTTAAACTGTTTCATTGAGGTATCAGACACCCAAGATATTTGGAAAGTAATTGTTCTGAATTTTTGTTTCCAGTCCTTTTTCCCGTTCCTCTTCTGGTTATCCATTCCATATCTTTCTTTCATTCTCCATGGCATATCATAACTTAATATTGCAGTATAATTAACAATACCTAGGAAGGTTCTATTTTCTTTTAAAATATGTTTTAAGAATCCAAGCTTTGATTCAGAAAAATGAAAGAAAGAACATATAAAAGCATACAGTAAAAGAAAGAACATTAAGACCATACAAAAAAGCTATGTCCACAGAGAAAAGAACTCCAATTCAAAATAATCAAATAAAGCTCATTATACAGATAGGTCAAGGAACAGGACACTAAGATAAGGAGTTCTTTCCTCTTTATCGAACGGAAAATCTCCCCAACTGGTTTGAATTAGAAATAAGTTAAAATGCTAAATGCTATGACTTTGTGCTACATTTAGAAGCAAGAAAATATGCCAAGTTCCTTAATATCTGTCTCATCTCTAACATTATCTCTAAGATTTTATTATTCTGCACTAGCCTGCTAACCTAAATCAAATCTGGAGAATAAAGTCATTCAAAGAATTTTAGGCTTCCTTTTAAGGCTATAACCAACAATCTTAGGCTTCCTTTTGCATCTTGAATCAAGTCTGTTCCTTTTGAACCATTTTGATTTTGTCTGGTTTAGGTGGTTTTTTGTTTTGGAAAGTTAAACGCTTGTGGTTGGCTGCAAAAACCGTCTCTTTTGTTTCCTTTCTCTGAAGTCTGAACTTTAAACTGTTGATCAATTGTGTCAAAGCACATGAATTGGCGCTTGAAATTCTCAGGGTTGTGATCTTTCCATAATTTTTGGGTCAGTTCCTCCTTCACTTTGATGTTTTTTCGGGTACTTCAAAAGATATGCAATCTCTCTGTAGTTTGGATATGCTTGGAATATAACCAATCAATGACAGAATGCCTTTTCATTTTGGATATGTTAGTTTCAACTCGTTGTGCAATTTGATTAGAAAATTTTCAACTCAATTTGTAACTGGTCAATGGCGGAATGCCTTTTGGTTTTGGACATATCAGTTTCAACTGTTTGCACAATTTCGTTAGAAACTTTTCACCTCGTTTGGAAGTTAATTTTGTAATTGGACAGTTGTTTGAGGAAATAATCTTATCATATTTTGTTGTTTTAAGAATGTATCAAGAAGTGGCCACATCGGTTGAGGGGCCTGGGTGTCAAACCTTAGCTCAGACCTTTGGTTGAATCTCCTTAGTGTCTTTAAAAGTTGGAATATAAGTGCATGAAGTAAGGTTTCTCTCCTAATCTTTGATGCACCAAGATTAGCATATAGAATCCTAAACATTAAAGGGTGAATGAAACTGAAGCCGAGAGTTCGGAAAACTCTCTGACTGAAGCACCAATATTCAATTTACATAAAAAAAAAAAAAAAAAAAAAAAGTCCAGAAAACTCTACCTATCTGTTGGATTGATATGACAACCCTAGAAGGGGGTGAATAGGGTGTAAAAAGAATATATTTTAGTCCGCTTAATTTTACAAATGATCACACTTTTTTAGAGCAATTAAAAATTGCCAATTAACACGAGAAGTACAAAAATAATAATACGATTCAAAACAATAAAAAATTATGAAAACTTAGTGATTGAAAAGGCATAACAATAAAAAATTATGCTTAATTTTTATTTTAGTCATAACTTCTTCGTTTTAGCTCCAATTGAGTTATTCCAAAGGTGTTGGAATCGTGATTCCAAGCTCTACACTATGTACACTTCAAAACACTAAAATTATTAGTAATTAGGAGCATGTTATCATCAAAATATTAATTAATTAATTTGAGATTAAGAGCCAAAAAGTCAACACTATTGTCAATTAGAGATAGAACAGTTCAAGAAGAGGTTTAGTGGATTTTCCATCCTTTTTTCTGGAAAGAATGGTTACATTGTTTAAAACAAAGAGGAGAGATCCTTCTCTGAACGCAATCATATTGTATACTCTTGGACGAAAGCTGACTAAAGATATACCTTGCAATTTTTAGTAAGTTTGGGTCTGCAAAACCTTTTTTATATAACTCCAAGATAATAGAGGGGTTTTTTTTTAAAACCACAATATAATAAACAGAGGGAACTGAAAAGGCACTTGAATTGGAAGTTTGAACTCTTGGAATCCTGGTTTAAGGAGACATGAAGATCGTTCAACATGATAATAAGAATGATTCTCACTTCGACTTCTCTCTGTTGCTGTTCTTTCTGTTATCTTGAAATGCAACTTTTGATAATGAATAAAGATTAGCCTCATCCCGTAAGTCTTAATTCAACGATACAACCACCTACGTTGCACTGAAGGTAGTGTTTATGTTATAAGCTATTCTAACTGAAGCACTCTTACCCAATTGGAACAAGAGACTTGTAATTATTTAGCACTAGAGCAAGCTTATGACTGTCGTCCACCATCATGGGCCTTTAGTGGAAGAATAGGAGCATACCTTATGAATTGCCTATTGCACTGCTTCATATTTGCGACCAATCACAATCTGCCAGATATCTTCCCTGGGAGATTTTCATAACCAATTGTGAGGAAGGTTAATGTTTTTCCTTTTGATATTTGTTATGTTTAAACCTTCATTCATAAGAGTGACCAGAGACCACATCAATCTAACTAGGTGATTACTCCTTTAGTCATTGGAACCTTCCCAAAAGGAATTCCTAATGTCTTTCTCTAAAATTCCATCTCTTCAGAGGGAATGTGTTAGAGACTGAAAGAAAGTATCAAGGGAGGTTGGTGAGGATTTTCTTTTTCTTTTTCTTTATCAAAAGATGTCTTGTTGTCTCTCCTATCTCGACAGGCACAATAATTCTTCAGTTAATATAATTGTTGTTTTCTATGAGGCCATTGATGATATCTGGTTAACATCACTGAAGGTTGAAGAGACTGAGAACTCCAGCAGATTTTCTTTGCGAAATTACCATGAATATAAATGCCTTGATTTTCACTATCCTGCTGATAGAACATCAACTTTGGAGAAACAAATCTTAGGATGAGGAATCTTCTCCCTTCCCAATATTTTTTATTGTCTTGTTTCTCATTTGAAAATAGTGTTGTTTTAGTGCATCTGTGATTCAGTATGCTAAGCAGATCTATGGTGTATTGCTGCCATCTAAGTGGGGTTTTGTTGAGGTTCCTCCCTTGTTATTAAATTTCTGTTTAGTTCGTACAAGTCTATGACTTTGACTATTCGCTTTTATGTTCTTATAAATTAAAAAAAACAACACTTTTATGTAGTTATTGATTTCCTGATCAGTTGTGTAATTATCTAAGGCTTTTCTTTTCTTCTGTATGAAAAAAGGCTGTAACTTTCTTTGCGTTTTATGGAGTACGTGCTTCACACGTAGAAATACTGTGTTAGGGTATGTGAATGAAAGAAGGATTTTCTTGCATGACTTATTTCTGGGAGAAATCTTAATACTTTTTTATTTCTTTAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGGTGGGTACTCGCAATCTCTCCTTTTCCATGCTTTTTCATAATTTTTGTGCGAGTCTAACAAAATGTTACATAGGCAAATTCCGTGTTCTATTACACATAAGAATTTCAATCTTCTGATGCATACTTTTCAATTGTAGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGGTGAGTATTTATTTTAATTTATTATGTTTTGTTGACATGGTAGAAAGCTGGATATTTTTCCCCATTGTGGGTGGGTGGGGGCAAACTCTGCAACCTTACCTAATTTTCACGATAGTAAAAGGTCGGCATTCTTCAACCAAGCATATGCAGAAGTATAGCTCCATTGGAGGGAAAGGACACAATAGTGAAAATACTAAAATGTCAATACCATAACTGTGAAAAGTGTTTTTTAACTAATCTTGCAAATAGTATTCAATTTCTTTTTTGATATTTGTTGCCCACTTAACCAAAAATGCTTAGATCAAAAGATTGTTTTTTGAGAAATAAATTATTGACAATATTTTCATATGCGCATGCGCGCACACACATATATATGTACAAGTGTTCCACTAGTAAACCTACTCTAACATGGCCTTGCAACAATAGGGATTAGAATTTCTCTATCTGCCTCTCTTCCATGTTATCCCACTTTCTCCTTTGATGGAATGGGCTACTGGTGTCCAAAATTACTTTGCAGAATTTTCCTAATCGTAACTTGTGTTCGCAGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGGAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTAATGGTCTTTGTTTTTTTTTTTTT ATATTTCCAAAAGCATAGAAACTGAAGAGGGCGAGAGAGTGAAGAAAGAAAGAGCCAAATTCGCCGTCCTAGTGGTGCGACCTGAGATCATAGTCGGAGAAATCACCGATTTCAATCTACGATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGATTGGAAGCATGCCCTTCTCGAAAATAAACCTTTGGCTTTTAGAAGAGACAAATCCCACAATATGCTGCAGTTCTTATTTAAAGCTGTGTTTTGTTTGTTTTCTAATGGTCTTTGTTTTTTTTTTTTT ATGTGGAGGAGATTGCTCGCTTCGCAGCTCAAACCCCTCAAATCTCTTCCCTCATCATCGACGCCCGCATCCGCTCCGTTAGGATGCATTTCCAAAGCCACTCGTCTCGGTGCTGCTTCTCATGTTTCTCCTTCCGCGCCTGTTTCGCTCTTCGCTCGCTATTACGCCTCTGATTCTGCTGGTACTGGTGTGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGACACGAGCGTGAAGAGCTTGAGGCTTTGCTTGAGGGAAAGGACATCCTTGACATAAACCATCCTGTTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGATTAGTTGGATGTCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGACGTGCCACACGAATGCCCTGTGTGCTCACAGTACTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCCCCGGATGGTTTTGGAGATGATGACCACCACCATTGA MWRRLLASQLKPLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSAGTGVKKVEDVMPIATGHEREELEALLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
BLAST of Carg06495 vs. NCBI nr
Match: XP_022956147.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_022980065.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94 Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Carg06495 vs. NCBI nr
Match: XP_023528417.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354.4 bits (908), Expect = 2.2e-94 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Carg06495 vs. NCBI nr
Match: XP_004151243.1 (PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 hypothetical protein Csa_3G538670 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 8.0e-84 Identity = 152/174 (87.36%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of Carg06495 vs. NCBI nr
Match: XP_022998035.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 316.2 bits (809), Expect = 6.7e-83 Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of Carg06495 vs. NCBI nr
Match: XP_023523890.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.4 bits (799), Expect = 9.7e-82 Identity = 152/174 (87.36%), Postives = 160/174 (91.95%), Query Frame = 0
BLAST of Carg06495 vs. TAIR10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein) HSP 1 Score: 206.8 bits (525), Expect = 1.0e-53 Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 0
BLAST of Carg06495 vs. TAIR10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein) HSP 1 Score: 203.4 bits (516), Expect = 1.2e-52 Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0
BLAST of Carg06495 vs. TAIR10
Match: AT1G52710.1 (Rubredoxin-like superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 5.8e-28 Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9LW15|CX5B1_ARATH (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.9e-52 Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 0
BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9SSB8|CX5B2_ARATH (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51 Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0
BLAST of Carg06495 vs. Swiss-Prot
Match: sp|Q9SSS5|CX5BL_ARATH (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26 Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Carg06495 vs. Swiss-Prot
Match: sp|P29505|COX5_DICDI (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3) HSP 1 Score: 58.5 bits (140), Expect = 8.3e-08 Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A0A0LDH6|A0A0A0LDH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.3e-84 Identity = 152/174 (87.36%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A1S4DWP7|A0A1S4DWP7_CUCME (LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489917 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70 Identity = 143/189 (75.66%), Postives = 153/189 (80.95%), Query Frame = 0
BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A0A0KYD4|A0A0A0KYD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 5.3e-68 Identity = 136/179 (75.98%), Postives = 155/179 (86.59%), Query Frame = 0
BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A1S3BYC3|A0A1S3BYC3_CUCME (cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494723 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 9.0e-68 Identity = 135/178 (75.84%), Postives = 152/178 (85.39%), Query Frame = 0
BLAST of Carg06495 vs. TrEMBL
Match: tr|A0A2C9W1M5|A0A2C9W1M5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G117400 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 4.3e-62 Identity = 121/173 (69.94%), Postives = 141/173 (81.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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