Carg06470 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTTCTGATTTCCGAGACGGTGGTACATAAATTCGATGAGCAAAGCGTTGAAGGTCGAATATGGGCTTTGACTTGGAGAGGTAACAAAGCCCATATTGTCCATCGGCCCACATCAATGGGCTTTTCTCCAATATTACACCCATCCACAAAATCAAATTATAAGGTTAGAAAAAAAATCTCTTTTTATCTGTAATAAAAAAAAAAAAAAAAAGGTTCAATCCACTTTTTAAAAAAAATCCAAATACACCCGATGATTGTTATGATATTGATTGAAATTGTCCACATAGTATAAACTCTCGTAACTTTGCTTTGAGCTTTCTCAGGAAACCTCGTTCTAATAGTGATAGTATTTCTCACTTATAAACTCATGATCCTTTACTAGATTAACCAACGTGGGACTCACTCCTAATAATAATCTCCAATAATCCTCAACAAGCAATATAGGTTCAAATCTCTAGCCTTGATGTGAGAAGAAAGTTTTAGGAAACTAGGGTGTAAAGATTTTGAAAGAGAGTTTAAAAGTAAGGTTAAGAAATAAAAGCAAGAACAACTTTTTTTTTATCAGTCAATTATTGATTTTAGTCTAAATCCACCGTTTCTCTATAAATATAACCCTTCCAATTCTGTTCCCCATATCTCAGTCGTGAACAAAAAATTCAAATCTCTCCTCTTCTTCTCTCAAAAATCTCATCCAATATTCAAAAAATGGACCAAAATTTAGAAGCCGTATCCAAGAGATTATGGAATATGGTTCGTATAGCTTATTACATGCTCAGGAAAGGCATTTCCAAGAGCAAGCTTATGGCCGACCTCACAAATCTTATGTCCAAACGCCGTAAGATCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACCACCACGCCGCCTCCGCTGCCTTTTCCCTCACCCACTTTTCGCCGGGACCGCCACCTCGCTACTGCCGGTCACTACGAATTTAGCTGTACTAACAGCCCTGCTTTTCCTACTTTCCATTCCACCTTCAACAAACGCCGCCATTTCTTCGCCTGTGCTCACGCGCCCAACACGCTGGATGATGACGTGGCCGCAATGAACGCTTTCAAGGCCGTTTTGGAGGCTCTTAACAATGACGTGGCGGTTGATGTGGCTTCGCCCGTCCTACCTGGGTTCGGCAAGAGCCCGATGGTGGCGAGGCAACTTAGAGTCACTGACTCCCCGTTTCCGGTGTCTGGAGGCGGCGACGAGGACTGCCACGTGGACCAAGCAGCGGAGGAATTTATAAATCGGTTTTATAACGAACTCCGGTTGCAGACAACGGCGGAGTAA ATGGCGCTTCTGATTTCCGAGACGGTGGTACATAAATTCGATGAGCAAAGCGTTGAAGGTCGAATATGGGCTTTGACTTGGAGAGCTTATTACATGCTCAGGAAAGGCATTTCCAAGAGCAAGCTTATGGCCGACCTCACAAATCTTATGTCCAAACGCCGTAAGATCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACCACCACGCCGCCTCCGCTGCCTTTTCCCTCACCCACTTTTCGCCGGGACCGCCACCTCGCTACTGCCGCCCTGCTTTTCCTACTTTCCATTCCACCTTCAACAAACGCCGCCATTTCTTCGCCTGTGCTCACGCGCCCAACACGCTGGATGATGACGTGGCCGCAATGAACGCTTTCAAGGCCGTTTTGGAGGCTCTTAACAATGACGTGGCGGTTGATGTGGCTTCGCCCGTCCTACCTGGGTTCGGCAAGAGCCCGATGGTGGCGAGGCAACTTAGAGTCACTGACTCCCCGTTTCCGGTGTCTGGAGGCGGCGACGAGGACTGCCACGTGGACCAAGCAGCGGAGGAATTTATAAATCGGTTTTATAACGAACTCCGGTTGCAGACAACGGCGGAGTAA ATGGCGCTTCTGATTTCCGAGACGGTGGTACATAAATTCGATGAGCAAAGCGTTGAAGGTCGAATATGGGCTTTGACTTGGAGAGCTTATTACATGCTCAGGAAAGGCATTTCCAAGAGCAAGCTTATGGCCGACCTCACAAATCTTATGTCCAAACGCCGTAAGATCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACCACCACGCCGCCTCCGCTGCCTTTTCCCTCACCCACTTTTCGCCGGGACCGCCACCTCGCTACTGCCGCCCTGCTTTTCCTACTTTCCATTCCACCTTCAACAAACGCCGCCATTTCTTCGCCTGTGCTCACGCGCCCAACACGCTGGATGATGACGTGGCCGCAATGAACGCTTTCAAGGCCGTTTTGGAGGCTCTTAACAATGACGTGGCGGTTGATGTGGCTTCGCCCGTCCTACCTGGGTTCGGCAAGAGCCCGATGGTGGCGAGGCAACTTAGAGTCACTGACTCCCCGTTTCCGGTGTCTGGAGGCGGCGACGAGGACTGCCACGTGGACCAAGCAGCGGAGGAATTTATAAATCGGTTTTATAACGAACTCCGGTTGCAGACAACGGCGGAGTAA MALLISETVVHKFDEQSVEGRIWALTWRAYYMLRKGISKSKLMADLTNLMSKRRKITGKALKNLMFHHHHHAASAAFSLTHFSPGPPPRYCRPAFPTFHSTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVLEALNNDVAVDVASPVLPGFGKSPMVARQLRVTDSPFPVSGGGDEDCHVDQAAEEFINRFYNELRLQTTAE
BLAST of Carg06470 vs. NCBI nr
Match: XP_022955942.1 (uncharacterized protein LOC111457776 [Cucurbita moschata]) HSP 1 Score: 284.6 bits (727), Expect = 2.5e-73 Identity = 155/200 (77.50%), Postives = 162/200 (81.00%), Query Frame = 0
BLAST of Carg06470 vs. NCBI nr
Match: XP_023528331.1 (uncharacterized protein LOC111791285 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 280.8 bits (717), Expect = 3.7e-72 Identity = 159/196 (81.12%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of Carg06470 vs. NCBI nr
Match: XP_022979606.1 (uncharacterized protein LOC111479283 [Cucurbita maxima]) HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70 Identity = 163/201 (81.09%), Postives = 171/201 (85.07%), Query Frame = 0
BLAST of Carg06470 vs. NCBI nr
Match: XP_016900382.1 (PREDICTED: uncharacterized protein LOC103490087 [Cucumis melo]) HSP 1 Score: 251.5 bits (641), Expect = 2.4e-63 Identity = 136/201 (67.66%), Postives = 148/201 (73.63%), Query Frame = 0
BLAST of Carg06470 vs. NCBI nr
Match: XP_011651489.1 (PREDICTED: uncharacterized protein LOC105434903 [Cucumis sativus] >KGN58047.1 hypothetical protein Csa_3G462680 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62 Identity = 136/188 (72.34%), Postives = 143/188 (76.06%), Query Frame = 0
BLAST of Carg06470 vs. TAIR10
Match: AT1G52140.1 (unknown protein) HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20 Identity = 70/202 (34.65%), Postives = 102/202 (50.50%), Query Frame = 0
BLAST of Carg06470 vs. TAIR10
Match: AT3G16330.1 (unknown protein) HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20 Identity = 76/194 (39.18%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of Carg06470 vs. TAIR10
Match: AT4G29110.1 (unknown protein) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12 Identity = 60/182 (32.97%), Postives = 83/182 (45.60%), Query Frame = 0
BLAST of Carg06470 vs. TAIR10
Match: AT4G32860.1 (unknown protein) HSP 1 Score: 41.6 bits (96), Expect = 6.8e-04 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 0
BLAST of Carg06470 vs. TrEMBL
Match: tr|A0A1S4DWM0|A0A1S4DWM0_CUCME (uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63 Identity = 136/201 (67.66%), Postives = 148/201 (73.63%), Query Frame = 0
BLAST of Carg06470 vs. TrEMBL
Match: tr|A0A0A0LBN4|A0A0A0LBN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 7.8e-63 Identity = 136/188 (72.34%), Postives = 143/188 (76.06%), Query Frame = 0
BLAST of Carg06470 vs. TrEMBL
Match: tr|A0A2P4JC04|A0A2P4JC04_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_71187 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.8e-36 Identity = 114/189 (60.32%), Postives = 128/189 (67.72%), Query Frame = 0
BLAST of Carg06470 vs. TrEMBL
Match: tr|A0A1Q3B0F5|A0A1Q3B0F5_CEPFO (DUF761 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04790 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.3e-33 Identity = 96/183 (52.46%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Carg06470 vs. TrEMBL
Match: tr|A0A0L9UP38|A0A0L9UP38_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g208800 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33 Identity = 91/188 (48.40%), Postives = 113/188 (60.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |