Carg06462 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06462
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin-responsive protein
Location	Cucurbita_argyrosperma_scaffold_051 : 645687 .. 648787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTTGGGCTCTTTTGCTATCCAACCAGAATCTCTTCTTCCCACTCCGAATTATCGGCCTTCCTCTTTTGGCTCTAACCTTTTTAACAATTTTCTACGCCCAAAACTGATTGAGACACACCCCTTTCTTACAATTTATCCCAAATTCTTGCTTATACTCCTTTTTTCTCTGGTTTGCTTTCAAATCTTTGCCAACTTTTGCGATTTGGGTTGTGTTTTTCTTTTCATCTCTTGCTCGGGATTTTGAAAACCCAGTTTTCTTGCCTAATTTCTCGAGAAATTTTACTCAGAAAGGAAACCAAATCATTTTTTAGTGTTTATCCCATCTGGGTTTCGTCTAAACCTCCCTAATCTTTCAATGGAGATAAATGGGTGTTCTGAGAAAGACGGGGTTTGCCCCCAACTGCTGGATTTGATCCCCAAACACCGGCAATGGGTTGCTGCGGGAGATGTTGCCGGAAAACCCCACACCTCCGATGATAAGAAGCTTGAACTGAGGCTTGGCCTGCCCGGAGAAGGCGATTGGTCCGGCAAAGGAAAGGATGAAGCCGTTCCTTATTTTGGGTGTTTTCCTGTTTCTCATAAATTTTCTCCTTCTGAGAATCCATGGCCGCCGTCTCCAAATTTTCATGGAAAGTTTCAAGCGGCCAAACTGCCAGCGTTTTGCCTGTCGTCAATGGGAAAAGAATCAGTGTCACAGCCCTGTTGCACGAAAATGGTTGATCTACATAATGCTGAACCTAAATCATTTCCTTCCTCTGCAAACACAGCTGTTTCCAACTGTTCTCAGAAAAGGTAGCGATATTAGTATTGTTTTCATGGCTATTGAAATTTCAAGCATGTGTGAAAGGACATGAGTTTTATGGTAGAGGCTTGTGTTTCTGGTTTAATTTGATCTAGAATGGACCAGTTGATGAACAAGACAACCCACTAAATTGAACTTTGTCTGTTTCCAAAATGGAGCAATTTTTAGATGTTTGCTATTTCTTTGCCGTTTTTTGTTGTCAATATCATCATTATTGTTCATCTTTGTGGGAAAAATTCAAAGGACTGCACCGGCTCCAGTTGTGGGATGGCCACCAATTAGATCGTCGAGAAGGAACCTTACAAGCAGCAGCGGCAGCTTCCCAAAGCCTGTGTCGGAATCGTCCTTGGATGCAGCACCGAGCAAGCTCCCAGCTCCCAGTAAGAAGGCGGCTGAAGTTGGTGGAAAGGGTCTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAAATTGATCTCAATGCTCATGATAGCTATGAAAAACTTTCCTCTGCTGTTGATGAACTCTTCAGAGGTTTACTTGCAGGTAATCTACACGAGAATTATTCAAGTTCTTGTTCTGTTCATATCAATTTTAATCTACGCTTACTTGTTTGTTCCTGTCTGCAGCTCAAAGAGATTCCCCAGCTGGTGGCGTTTTGAAGAAGCAAGATGACGAGAGACCGATCACCGGTTTGCTCGATGGAAGCGGAGAATATACTCTTGTTTACGAGGATAACGAAGGAGACCGAGTTCTTGTTGGCGATGTCCCTTGGCAGTAAGCATATTTCACCTCCTCGCCTGTAGTTATTGTTGATTTTTGGCTTTCCCTCAAAGTTGTTAAAACGCGTATACTAGGAAGAAGTTTCTACACCCTTATAAGGAATGCTTCGATCCCCTCTCCAACCGATGTGGGATCTCACAATCTACTCCCACGAATGTTGAGTTGTGATATCACAAACATGGATTGAGCGTAGATAAGACCATAACTCTTGTAATTTTTTTGTTGCAGAATGTTTGTTTCGACTGTGAAGAGGTTGCGTGTGCTGAAAAGCTCGGAATTACCCGCCTTGAGTCGTGAGTTGAAACACAATTAACATTCTTGTTTTTTCATCATTTTATGTATCAATTTAGATTATGATAAAGTCGATGTGTCTGAATACAGTCGGTTGCTCGAAGCCACAGAAGATGGCGCTCGACTCTGCGACCTAAGTGAAGGAAGAGAGGTTTTTAAGCTGAGGCTTGAGAGAAGAAGACATTTGAATTATGATATCATTAGTAGTAACTAAAATGGTTAGCTTAATCACCAAACCCATAGAGTAATGGTTTAATCTCTGTAATTTCTTGTGAAATTGCAATGTAATCAAATCAATCTCTCATCTTCTTTCTTTGTAGAAAGCCTGAATTAGTCTAAGTTGCTTTCGCATTGTAACACCAAAACAAGTGAGTGATTTGGAGTTTTTAATGTAAGTTATCCAACACATTGAAAGGCCTTGGTTTGGTTTTGAATGTGTATTATCTTCCCATAGATTTGCTATTAGATTTTAGACGAGGACAAGGTGTTTGTGTCTCATGGTTATGGTTGTCCAGGGCGTGTTGTCCATAGCGTGCCTGACATGAAATGACCCCAAATGTACTATTACAAGAAGATATGACTCATCGTCAATTCTTTCTACTTAGAGTTATATGTTATCTAAGCCGTTATGTTGTATTTCTTGCATATTAGTCTGTAATGTTGCTTTCAAACTCTCCTTATGAAATCTGTCTGGCAGTGAGCTTTTGTTGAAAAGATGAAACGAAGGAGGGCATTAGGGAGGTGGGTTGGAAGGGCATATGGAATGGGAAGAAAGGAGTGTCATTGTCATGGAGAGCTGCCCAACTTCGGGCCCCAAAACTGACGAACTCTTTAGTCCTTTTCCCATCTGAATAAGTGGTCAGGGCTTACACAACATCTCACATGCTCTCCCCTTCCACACCAACATCGCATACTGTCTTTTACATACCTCCAACCCTCCAACCCTTCACATCATAACTACTTAACTTTCATCTACAAAATGAAAATGGAAAGATGGATAAGGTATTGATTAATATTTAATTAGGATTCAAAATGGTGATAACACAAAGTGGAGGGTGGGACAAATTCAAAATGGAAATCAATTATGATATTGACTCAAAAATTGTGAAGCCTTTGTCAAAGGTTTCATGAATGGATGAAGCATTTAGATGTTGTTTGTGTATTTTCAGGCCAGTGGACAGAATATAATCATTAATCCTTCGTTTTCATTTACCCGACCTTTTTTCAAAACCTAA

mRNA sequence

TGTTTTGGGCTCTTTTGCTATCCAACCAGAATCTCTTCTTCCCACTCCGAATTATCGGCCTTCCTCTTTTGGCTCTAACCTTTTTAACAATTTTCTACGCCCAAAACTGATTGAGACACACCCCTTTCTTACAATTTATCCCAAATTCTTGCTTATACTCCTTTTTTCTCTGGTTTGCTTTCAAATCTTTGCCAACTTTTGCGATTTGGGTTGTGTTTTTCTTTTCATCTCTTGCTCGGGATTTTGAAAACCCAGTTTTCTTGCCTAATTTCTCGAGAAATTTTACTCAGAAAGGAAACCAAATCATTTTTTAGTGTTTATCCCATCTGGGTTTCGTCTAAACCTCCCTAATCTTTCAATGGAGATAAATGGGTGTTCTGAGAAAGACGGGGTTTGCCCCCAACTGCTGGATTTGATCCCCAAACACCGGCAATGGGTTGCTGCGGGAGATGTTGCCGGAAAACCCCACACCTCCGATGATAAGAAGCTTGAACTGAGGCTTGGCCTGCCCGGAGAAGGCGATTGGTCCGGCAAAGGAAAGGATGAAGCCGTTCCTTATTTTGGGTGTTTTCCTGTTTCTCATAAATTTTCTCCTTCTGAGAATCCATGGCCGCCGTCTCCAAATTTTCATGGAAAGTTTCAAGCGGCCAAACTGCCAGCGTTTTGCCTGTCGTCAATGGGAAAAGAATCAGTGTCACAGCCCTGTTGCACGAAAATGGTTGATCTACATAATGCTGAACCTAAATCATTTCCTTCCTCTGCAAACACAGCTGTTTCCAACTGTTCTCAGAAAAGGACTGCACCGGCTCCAGTTGTGGGATGGCCACCAATTAGATCGTCGAGAAGGAACCTTACAAGCAGCAGCGGCAGCTTCCCAAAGCCTGTGTCGGAATCGTCCTTGGATGCAGCACCGAGCAAGCTCCCAGCTCCCAGTAAGAAGGCGGCTGAAGTTGGTGGAAAGGGTCTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAAATTGATCTCAATGCTCATGATAGCTATGAAAAACTTTCCTCTGCTGTTGATGAACTCTTCAGAGGTTTACTTGCAGCTCAAAGAGATTCCCCAGCTGGTGGCGTTTTGAAGAAGCAAGATGACGAGAGACCGATCACCGAGGTTGCGTGTGCTGAAAAGCTCGGAATTACCCGCCTTGAGTCTCGGTTGCTCGAAGCCACAGAAGATGGCGCTCGACTCTGCGACCTAAGTGAAGGAAGAGAGGCCAGTGGACAGAATATAATCATTAATCCTTCGTTTTCATTTACCCGACCTTTTTTCAAAACCTAA

Coding sequence (CDS)

ATGGAGATAAATGGGTGTTCTGAGAAAGACGGGGTTTGCCCCCAACTGCTGGATTTGATCCCCAAACACCGGCAATGGGTTGCTGCGGGAGATGTTGCCGGAAAACCCCACACCTCCGATGATAAGAAGCTTGAACTGAGGCTTGGCCTGCCCGGAGAAGGCGATTGGTCCGGCAAAGGAAAGGATGAAGCCGTTCCTTATTTTGGGTGTTTTCCTGTTTCTCATAAATTTTCTCCTTCTGAGAATCCATGGCCGCCGTCTCCAAATTTTCATGGAAAGTTTCAAGCGGCCAAACTGCCAGCGTTTTGCCTGTCGTCAATGGGAAAAGAATCAGTGTCACAGCCCTGTTGCACGAAAATGGTTGATCTACATAATGCTGAACCTAAATCATTTCCTTCCTCTGCAAACACAGCTGTTTCCAACTGTTCTCAGAAAAGGACTGCACCGGCTCCAGTTGTGGGATGGCCACCAATTAGATCGTCGAGAAGGAACCTTACAAGCAGCAGCGGCAGCTTCCCAAAGCCTGTGTCGGAATCGTCCTTGGATGCAGCACCGAGCAAGCTCCCAGCTCCCAGTAAGAAGGCGGCTGAAGTTGGTGGAAAGGGTCTGTTTGTGAAGATCAATATGGATGGAGTTCCCATTGGTAGGAAAATTGATCTCAATGCTCATGATAGCTATGAAAAACTTTCCTCTGCTGTTGATGAACTCTTCAGAGGTTTACTTGCAGCTCAAAGAGATTCCCCAGCTGGTGGCGTTTTGAAGAAGCAAGATGACGAGAGACCGATCACCGAGGTTGCGTGTGCTGAAAAGCTCGGAATTACCCGCCTTGAGTCTCGGTTGCTCGAAGCCACAGAAGATGGCGCTCGACTCTGCGACCTAAGTGAAGGAAGAGAGGCCAGTGGACAGAATATAATCATTAATCCTTCGTTTTCATTTACCCGACCTTTTTTCAAAACCTAA

Protein sequence

MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKGKDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKMVDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDERPITEVACAEKLGITRLESRLLEATEDGARLCDLSEGREASGQNIIINPSFSFTRPFFKT

Homology

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BLAST of Carg06462 vs. NCBI nr
Match: XP_022956222.1 (auxin-responsive protein IAA26-like [Cucurbita moschata])

HSP 1 Score: 529.3 bits (1362), Expect = 9.3e-147
Identity = 257/263 (97.72%), Postives = 258/263 (98.10%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM
Sbjct: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
           VDLHNAEPKSFPSSANT VSN SQKRTAPAPVVGWPPIRSSRRNLTSSSGSF KPVSESS
Sbjct: 121 VDLHNAEPKSFPSSANTTVSNSSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFSKPVSESS 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
           LDAAPSKLPAPSKKA EVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL
Sbjct: 181 LDAAPSKLPAPSKKAVEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDSPAGGV KKQDDE+PIT
Sbjct: 241 LAAQRDSPAGGVWKKQDDEKPIT 263

[Close]

BLAST of Carg06462 vs. NCBI nr
Match: XP_022980482.1 (auxin-responsive protein IAA26-like [Cucurbita maxima] >XP_022980483.1 auxin-responsive protein IAA26-like [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143
Identity = 253/263 (96.20%), Postives = 257/263 (97.72%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           MEINGCSEKDGVCPQLLDLIPKHRQWVA GDVAGKPHTSD+KKLELRLGLPGEGDWSGKG
Sbjct: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAGGDVAGKPHTSDEKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           +DEAVPYFG FPVSHKF P ENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM
Sbjct: 61  RDEAVPYFGSFPVSHKFCP-ENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
           VDLHNAEPKSFPSSANTAVSN SQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS
Sbjct: 121 VDLHNAEPKSFPSSANTAVSNSSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
           LDAAPSKLPAPSKKA EVGGKGLFVKINMDGVPIGRKIDLNAHDSY+KLSSAVDELFRGL
Sbjct: 181 LDAAPSKLPAPSKKAVEVGGKGLFVKINMDGVPIGRKIDLNAHDSYQKLSSAVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDSPAGGVLKKQDDE+PIT
Sbjct: 241 LAAQRDSPAGGVLKKQDDEKPIT 262

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BLAST of Carg06462 vs. NCBI nr
Match: XP_023529160.1 (auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.2 bits (1328), Expect = 8.2e-143
Identity = 254/263 (96.58%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           +DEAVPYFG FPVSHK SPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQP CTKM
Sbjct: 61  RDEAVPYFGRFPVSHKISPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPRCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
           VDLHNAEPKSFPSSANTAVSN SQKRTAPAPVVGWPPIRSSRRNLTSSSGSF KPVSESS
Sbjct: 121 VDLHNAEPKSFPSSANTAVSNSSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFSKPVSESS 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
           LDAAPSKLPAPSKKA EVGGKGLFVKINMDGVPIGRKIDLNA DSYEKLSSAVDELFRGL
Sbjct: 181 LDAAPSKLPAPSKKAVEVGGKGLFVKINMDGVPIGRKIDLNALDSYEKLSSAVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDSPAGGVLKKQDDE+PIT
Sbjct: 241 LAAQRDSPAGGVLKKQDDEKPIT 263

[Close]

BLAST of Carg06462 vs. NCBI nr
Match: XP_008447559.1 (PREDICTED: auxin-responsive protein IAA26-like [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 6.8e-113
Identity = 208/263 (79.09%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           ME+NGCSEKD   PQLLDLIPK RQW+  GDVAGK +TSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           + ++VP FG FPVS KFSPSENPWPPSPNF GK Q  K+  FCLS+MGKE VSQPCCTKM
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
            DL NAE K FPSS N AVSN SQKRTAPAPVVGWPPIRSSRRNL SS  SF KP SES+
Sbjct: 121 GDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASS--SFSKPASESA 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
            DA+PSKLP P +K  +VGGKGLFVKINMDGVPIGRKIDLNA+DSYEKLSS VDELFRGL
Sbjct: 181 -DASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDS  GGVL KQ++E+PIT
Sbjct: 241 LAAQRDSSGGGVLNKQEEEKPIT 260

[Close]

BLAST of Carg06462 vs. NCBI nr
Match: XP_004150768.1 (PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus] >KGN58028.1 hypothetical protein Csa_3G444560 [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 8.8e-113
Identity = 207/263 (78.71%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           M +NGCSEKD   PQLLDLIPK RQW+A GDVAGK +TSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MGMNGCSEKDEDYPQLLDLIPKDRQWLATGDVAGKANTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           +D++VP FG FPVS KF+PSENPWPP PNF GK Q  K+  FCLS+MGKE VSQPCCTKM
Sbjct: 61  RDDSVPSFGYFPVSRKFTPSENPWPPHPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
            DLHNAE K FPSS N AVSN SQKRTAPAPVVGWPPIRSSRRN+ SS  SF KP SESS
Sbjct: 121 GDLHNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNIASS--SFSKPASESS 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
            DA+PSKLP P +K  +VGGKGLFVKINMDGVPIGRKIDLNA+DSYEKLS  VDELFRGL
Sbjct: 181 -DASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDS  GGVL KQ++E+PIT
Sbjct: 241 LAAQRDSSGGGVLNKQEEEKPIT 260

[Close]

BLAST of Carg06462 vs. TAIR10
Match: AT3G16500.1 (phytochrome-associated protein 1)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 107/261 (41.00%), Postives = 138/261 (52.87%), Query Frame = 0


Query: 3   INGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKGKD 62
           + GC     + P+LLDLIP+ R+W        K +T  +KKLELRLG PG     G  +D
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPG-----GDEED 60

Query: 63  EAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKMVD 122
            +                               A K     + ++ KE       T+   
Sbjct: 61  HS-------------------------------AIKKKNTEIRNIKKE-------TEDKS 120

Query: 123 LHNAEPKSF-PSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSL 182
            H      F PS+  T+V + SQKRTAP PVVGWPP+RS R+NL S+S S  K  +ESS 
Sbjct: 121 FHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSS--KLGNESSH 180

Query: 183 DAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGLL 242
               +K     +K  E   +G+FVKINMDGVPIGRK+DLNA++SYE+LS  VD+LFRGLL
Sbjct: 181 GGQINK-SDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLL 206

Query: 243 AAQRDSPAGGVLKKQDDERPI 263
           AAQRD   G     Q +E+PI
Sbjct: 241 AAQRDISDG-----QGEEKPI 206

[Close]

BLAST of Carg06462 vs. TAIR10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18)

HSP 1 Score: 124.8 bits (312), Expect = 9.6e-29
Identity = 100/265 (37.74%), Postives = 128/265 (48.30%), Query Frame = 0


Query: 3   INGCSEKDGVCPQLLDL-IPKHRQ-WVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 62
           + G S    + P+LLDL IP+ R+ W    D       +++KKLEL+LG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWF--HDEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 122
            DE                                          SM +    +P    +
Sbjct: 61  DDE------------------------------------------SMIRHMKKEPKDKSI 120

Query: 123 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGS--FPKPVSE 182
           + L  A     PSS  T     S KRTAP PVVGWPP+RS R+NL S S S       + 
Sbjct: 121 LSL--AGKYFSPSSTKTT----SHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTS 180

Query: 183 SSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFR 242
           + +     K  A +K        G+FVKINM GVPIGRK+DL+AH+SYE+LS  VD+LFR
Sbjct: 181 NGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR 205

Query: 243 GLLAAQRDSPAGGVLKKQDDERPIT 264
           GLLAAQRD P+       +DE+PIT
Sbjct: 241 GLLAAQRDFPS-----SIEDEKPIT 205

[Close]

BLAST of Carg06462 vs. TAIR10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28)

HSP 1 Score: 81.6 bits (200), Expect = 9.4e-16
Identity = 51/123 (41.46%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 115 PCCTKMVDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPK 174
           P C +    +N    S   S+    S  S  R   APVVGWPP+RSSRRNLT        
Sbjct: 13  PPCHQFTSNNNIN-GSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLT-------- 72

Query: 175 PVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVD 234
                      ++L    KK      K L+VKINM+GVPIGRK++L+A+++Y++LS AVD
Sbjct: 73  -----------AQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVD 115

Query: 235 ELF 238
           +LF
Sbjct: 133 QLF 115

[Close]

BLAST of Carg06462 vs. TAIR10
Match: AT2G33310.2 (auxin-induced protein 13)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-11
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 129 KSFPS-SANTAVSNCSQKRTAP----APVVGWPPIRSSRRNLTSSSGSFPKPVSESSLDA 188
           K FPS  +  A  + S   ++P    + VVGWPPI S R N   ++ +            
Sbjct: 49  KDFPSVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSXXXXXXXXX 108

Query: 189 APSKLPAPSKKAAEVGGKGL--FVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELF 238
              K   P     +V GK    F+K+NMDGV IGRK+DLNAH SYE L+  ++++F
Sbjct: 109 XXXKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF 164

[Close]

BLAST of Carg06462 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11
Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 129 KSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSLDAAPSKL 188
           KS     + A    +    A A VVGWPPIRS R+N  +SS                   
Sbjct: 160 KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS------------------- 219

Query: 189 PAPSKKAAEVGGKG----LFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELF 238
              SK   EV GK     LFVK++MDG P  RK+DL  + SY++LSSA++++F
Sbjct: 220 --TSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMF 251

[Close]

BLAST of Carg06462 vs. Swiss-Prot
Match: sp|Q8LAL2|IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-34
Identity = 107/261 (41.00%), Postives = 138/261 (52.87%), Query Frame = 0


Query: 3   INGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKGKD 62
           + GC     + P+LLDLIP+ R+W        K +T  +KKLELRLG PG     G  +D
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPG-----GDEED 60

Query: 63  EAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKMVD 122
            +                               A K     + ++ KE       T+   
Sbjct: 61  HS-------------------------------AIKKKNTEIRNIKKE-------TEDKS 120

Query: 123 LHNAEPKSF-PSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSL 182
            H      F PS+  T+V + SQKRTAP PVVGWPP+RS R+NL S+S S  K  +ESS 
Sbjct: 121 FHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSS--KLGNESSH 180

Query: 183 DAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGLL 242
               +K     +K  E   +G+FVKINMDGVPIGRK+DLNA++SYE+LS  VD+LFRGLL
Sbjct: 181 GGQINK-SDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLL 206

Query: 243 AAQRDSPAGGVLKKQDDERPI 263
           AAQRD   G     Q +E+PI
Sbjct: 241 AAQRDISDG-----QGEEKPI 206

[Close]

BLAST of Carg06462 vs. Swiss-Prot
Match: sp|O24408|IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 100/265 (37.74%), Postives = 128/265 (48.30%), Query Frame = 0


Query: 3   INGCSEKDGVCPQLLDL-IPKHRQ-WVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 62
           + G S    + P+LLDL IP+ R+ W    D       +++KKLEL+LG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWF--HDEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 122
            DE                                          SM +    +P    +
Sbjct: 61  DDE------------------------------------------SMIRHMKKEPKDKSI 120

Query: 123 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGS--FPKPVSE 182
           + L  A     PSS  T     S KRTAP PVVGWPP+RS R+NL S S S       + 
Sbjct: 121 LSL--AGKYFSPSSTKTT----SHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTS 180

Query: 183 SSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFR 242
           + +     K  A +K        G+FVKINM GVPIGRK+DL+AH+SYE+LS  VD+LFR
Sbjct: 181 NGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR 205

Query: 243 GLLAAQRDSPAGGVLKKQDDERPIT 264
           GLLAAQRD P+       +DE+PIT
Sbjct: 241 GLLAAQRDFPS-----SIEDEKPIT 205

[Close]

BLAST of Carg06462 vs. Swiss-Prot
Match: sp|Q6H543|IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.4e-23
Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 142 CSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGK 201
           C Q R+   PVVGWPP+R+ RRNL +S        S++SL+    K  A   KA E+  +
Sbjct: 129 CFQTRSPSTPVVGWPPVRTFRRNLATS--------SKASLELQNGKKAA---KAEEI-KR 188

Query: 202 GLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDERP 261
             F+KINMDGVPIGRKIDLNA DSYEKLS AVD+LFRGLLAAQRD    G    Q ++  
Sbjct: 189 APFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVA 238

Query: 262 IT 264
           I+
Sbjct: 249 IS 238

[Close]

BLAST of Carg06462 vs. Swiss-Prot
Match: sp|Q8LQ74|IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.8e-20
Identity = 88/283 (31.10%), Postives = 125/283 (44.17%), Query Frame = 0


Query: 5   GCSEKDGVCPQLLDLIPKHRQWVAAGDVA-GKPHTS-----DDKKLELRLGLPG--EGDW 64
           G ++++G+ PQLLDLIP  ++W     +  G+   +     +DKKL+L+LGLPG  E D 
Sbjct: 4   GSNKREGLPPQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDE 63

Query: 65  SGKGKDEAVPY------FGCFPVSHKFSPS------------ENPWPPSPNFHGKFQAAK 124
           +   +D  +           FP   K                +     +  ++ + Q A+
Sbjct: 64  AETLRDYRLQQESPSLSLSFFPKHSKTXXXXXXXXGAKRGFIDTVEDKTEGYNDQKQQAR 123

Query: 125 LPAFCLSSMGKESVSQPCCTKMVDLHNAEPKSFPSSANTAVSN-CSQKRTAPAPVVGWPP 184
             A C   +  E                      + A  A +   +Q R A APVVGWPP
Sbjct: 124 --AGCGKELAVEEXXXXXXXXXXXXXXXXXXXXGAPATPARNRPQTQGRGAAAPVVGWPP 183

Query: 185 IRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRK 244
           IRS RRNL SS                   L            K   VKINMDG+PIGRK
Sbjct: 184 IRSFRRNLASSXXXXXXXXXXXXXXXXXXXLTCK---------KNPLVKINMDGIPIGRK 243

Query: 245 IDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDER 261
           IDL A++SY+ LSSAV +LF G L AQ+D     + ++  D++
Sbjct: 244 IDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDK 275

[Close]

BLAST of Carg06462 vs. Swiss-Prot
Match: sp|Q5W670|IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-19
Identity = 75/184 (40.76%), Postives = 89/184 (48.37%), Query Frame = 0


Query: 66  PYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKMVDLHN 125
           P  GCFP   K + S         F      A L  +  S    E   +       ++  
Sbjct: 80  PSIGCFPTHSKPTTSIGTTGAKRGFFA-IVGATLEGYNQSHRDTEECGKELTLGDENMAG 139

Query: 126 AEPKS---FPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESSLD 185
              K     P  +  A S+  Q R A  PVVGWPPIRS RRNLT  +GS  K   E   D
Sbjct: 140 ERKKGCCPSPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLT--NGSSFKQSPERQND 199

Query: 186 AAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGLLA 245
            A  K     KK          VKINMDG+PIGRK+DL  +DSY+KLSSAV+ELFRG L 
Sbjct: 200 EADDKAKPICKKRP-------LVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLE 253

Query: 246 AQRD 247
           AQ+D
Sbjct: 260 AQKD 253

[Close]

BLAST of Carg06462 vs. TrEMBL
Match: tr|A0A1S3BIC1|A0A1S3BIC1_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 4.5e-113
Identity = 208/263 (79.09%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           ME+NGCSEKD   PQLLDLIPK RQW+  GDVAGK +TSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           + ++VP FG FPVS KFSPSENPWPPSPNF GK Q  K+  FCLS+MGKE VSQPCCTKM
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
            DL NAE K FPSS N AVSN SQKRTAPAPVVGWPPIRSSRRNL SS  SF KP SES+
Sbjct: 121 GDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASS--SFSKPASESA 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
            DA+PSKLP P +K  +VGGKGLFVKINMDGVPIGRKIDLNA+DSYEKLSS VDELFRGL
Sbjct: 181 -DASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDS  GGVL KQ++E+PIT
Sbjct: 241 LAAQRDSSGGGVLNKQEEEKPIT 260

[Close]

BLAST of Carg06462 vs. TrEMBL
Match: tr|A0A0A0L8D0|A0A0A0L8D0_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G444560 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 5.8e-113
Identity = 207/263 (78.71%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 1   MEINGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG 60
           M +NGCSEKD   PQLLDLIPK RQW+A GDVAGK +TSDDKKLELRLGLPGEGDWSGKG
Sbjct: 1   MGMNGCSEKDEDYPQLLDLIPKDRQWLATGDVAGKANTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KDEAVPYFGCFPVSHKFSPSENPWPPSPNFHGKFQAAKLPAFCLSSMGKESVSQPCCTKM 120
           +D++VP FG FPVS KF+PSENPWPP PNF GK Q  K+  FCLS+MGKE VSQPCCTKM
Sbjct: 61  RDDSVPSFGYFPVSRKFTPSENPWPPHPNFLGKLQPTKISGFCLSAMGKEGVSQPCCTKM 120

Query: 121 VDLHNAEPKSFPSSANTAVSNCSQKRTAPAPVVGWPPIRSSRRNLTSSSGSFPKPVSESS 180
            DLHNAE K FPSS N AVSN SQKRTAPAPVVGWPPIRSSRRN+ SS  SF KP SESS
Sbjct: 121 GDLHNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNIASS--SFSKPASESS 180

Query: 181 LDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGRKIDLNAHDSYEKLSSAVDELFRGL 240
            DA+PSKLP P +K  +VGGKGLFVKINMDGVPIGRKIDLNA+DSYEKLS  VDELFRGL
Sbjct: 181 -DASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGL 240

Query: 241 LAAQRDSPAGGVLKKQDDERPIT 264
           LAAQRDS  GGVL KQ++E+PIT
Sbjct: 241 LAAQRDSSGGGVLNKQEEEKPIT 260

[Close]

BLAST of Carg06462 vs. TrEMBL
Match: tr|A0A1U8KAQ4|A0A1U8KAQ4_GOSHI (Auxin-responsive protein OS=Gossypium hirsutum OX=3635 GN=LOC107913884 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.8e-62
Identity = 153/289 (52.94%), Postives = 184/289 (63.67%), Query Frame = 0


Query: 4   NGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG--- 63
           +GCS+    CP+LLDLIP+ R+W   G+   +  +S++KKLELRLG PGE +WS K    
Sbjct: 3   SGCSKNVESCPKLLDLIPQEREWHLKGEEERRDGSSEEKKLELRLGPPGENNWSNKNNTE 62

Query: 64  KDEAVPYFGCF-------PVSHKFSPSEN---------PWPPS-------PNFHGKFQAA 123
           +DE++   G F         +HKF   E+         PW  S       P F  +F + 
Sbjct: 63  RDESLLSLGYFSSMKSNGKQTHKFPCPEDHSVGSVLSTPWAKSHHQQQTMPPFL-QFPST 122

Query: 124 KLPAFCLSSMGKESVSQPCCTKMVDLHNAEPKSFPSSANTAVS-NCSQKRTAPAPVVGWP 183
             P   L  + KES SQPCC K VDL  AE K+F   ANTAV  N SQKRTAP PVVGWP
Sbjct: 123 TAPPQTLPVIAKES-SQPCCNKAVDLQEAERKAFKPPANTAVPLNGSQKRTAPGPVVGWP 182

Query: 184 PIRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGR 243
           PIRS R+NL +SS S  K  SES     P+   A  K AAE  GKGLFVKINMDGVPIGR
Sbjct: 183 PIRSIRKNLANSSSS--KLASES-----PTHKAANEKPAAEPNGKGLFVKINMDGVPIGR 242

Query: 244 KIDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDERPITEV 266
           K+DL A+DSYEKLS+AVDELFRGLLAAQRDS AGG++ KQ++E+ IT V
Sbjct: 243 KVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGV 282

[Close]

BLAST of Carg06462 vs. TrEMBL
Match: tr|A0A0D2RI71|A0A0D2RI71_GOSRA (Auxin-responsive protein OS=Gossypium raimondii OX=29730 GN=B456_011G070800 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 152/289 (52.60%), Postives = 183/289 (63.32%), Query Frame = 0


Query: 4   NGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG--- 63
           +GCS+    CP+LLDLIP+ R+W    +   +  +S++KKLELRLG PGE +WS K    
Sbjct: 3   SGCSKNVESCPKLLDLIPQEREWHLKREEERRDGSSEEKKLELRLGPPGENNWSNKNNTE 62

Query: 64  KDEAVPYFGCF-------PVSHKFSPSEN---------PWPPS-------PNFHGKFQAA 123
           +DE++   G F         +HKF   E+         PW  S       P F  +F + 
Sbjct: 63  RDESLLSLGYFSSMKSNGKQTHKFPCPEDHSVGSVLSTPWAKSHHQQQTMPPFL-QFPST 122

Query: 124 KLPAFCLSSMGKESVSQPCCTKMVDLHNAEPKSFPSSANTAVS-NCSQKRTAPAPVVGWP 183
             P   L  + KES SQPCC K VDL  AE K+F   ANTAV  N SQKRTAP PVVGWP
Sbjct: 123 TAPPQTLPVIAKES-SQPCCNKAVDLQEAERKAFKPPANTAVHLNGSQKRTAPGPVVGWP 182

Query: 184 PIRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGR 243
           PIRS R+NL +SS S  K  SES     P+   A  K AAE  GKGLFVKINMDGVPIGR
Sbjct: 183 PIRSIRKNLANSSSS--KLASES-----PTHKAANEKPAAEPNGKGLFVKINMDGVPIGR 242

Query: 244 KIDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDERPITEV 266
           K+DL A+DSYEKLS+AVDELFRGLLAAQRDS AGG++ KQ++E+ IT V
Sbjct: 243 KVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGV 282

[Close]

BLAST of Carg06462 vs. TrEMBL
Match: tr|A0A0D2T3T9|A0A0D2T3T9_GOSRA (Auxin-responsive protein OS=Gossypium raimondii OX=29730 GN=B456_011G070800 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 152/289 (52.60%), Postives = 183/289 (63.32%), Query Frame = 0


Query: 4   NGCSEKDGVCPQLLDLIPKHRQWVAAGDVAGKPHTSDDKKLELRLGLPGEGDWSGKG--- 63
           +GCS+    CP+LLDLIP+ R+W    +   +  +S++KKLELRLG PGE +WS K    
Sbjct: 3   SGCSKNVESCPKLLDLIPQEREWHLKREEERRDGSSEEKKLELRLGPPGENNWSNKNNTE 62

Query: 64  KDEAVPYFGCF-------PVSHKFSPSEN---------PWPPS-------PNFHGKFQAA 123
           +DE++   G F         +HKF   E+         PW  S       P F  +F + 
Sbjct: 63  RDESLLSLGYFSSMKSNGKQTHKFPCPEDHSVGSVLSTPWAKSHHQQQTMPPFL-QFPST 122

Query: 124 KLPAFCLSSMGKESVSQPCCTKMVDLHNAEPKSFPSSANTAVS-NCSQKRTAPAPVVGWP 183
             P   L  + KES SQPCC K VDL  AE K+F   ANTAV  N SQKRTAP PVVGWP
Sbjct: 123 TAPPQTLPVIAKES-SQPCCNKAVDLQEAERKAFKPPANTAVHLNGSQKRTAPGPVVGWP 182

Query: 184 PIRSSRRNLTSSSGSFPKPVSESSLDAAPSKLPAPSKKAAEVGGKGLFVKINMDGVPIGR 243
           PIRS R+NL +SS S  K  SES     P+   A  K AAE  GKGLFVKINMDGVPIGR
Sbjct: 183 PIRSIRKNLANSSSS--KLASES-----PTHKAANEKPAAEPNGKGLFVKINMDGVPIGR 242

Query: 244 KIDLNAHDSYEKLSSAVDELFRGLLAAQRDSPAGGVLKKQDDERPITEV 266
           K+DL A+DSYEKLS+AVDELFRGLLAAQRDS AGG++ KQ++E+ IT V
Sbjct: 243 KVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGV 282

The following BLAST results are available for this feature:

BLAST of Carg06462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956222.1	9.3e-147	97.72	auxin-responsive protein IAA26-like [Cucurbita moschata]	[more]
XP_022980482.1	1.3e-143	96.20	auxin-responsive protein IAA26-like [Cucurbita maxima] >XP_022980483.1 auxin-res...	[more]
XP_023529160.1	8.2e-143	96.58	auxin-responsive protein IAA26-like [Cucurbita pepo subsp. pepo]	[more]
XP_008447559.1	6.8e-113	79.09	PREDICTED: auxin-responsive protein IAA26-like [Cucumis melo]	[more]
XP_004150768.1	8.8e-113	78.71	PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus] >KGN58028.1 hyp...	[more]

BLAST of Carg06462 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16500.1	1.8e-35	41.00	phytochrome-associated protein 1	[more]
AT1G51950.1	9.6e-29	37.74	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	9.4e-16	41.46	indole-3-acetic acid inducible 28	[more]
AT2G33310.2	5.3e-11	37.07	auxin-induced protein 13	[more]
AT2G22670.4	6.9e-11	38.05	indoleacetic acid-induced protein 8	[more]

BLAST of Carg06462 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LAL2\|IAA26_ARATH	3.3e-34	41.00	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
sp\|O24408\|IAA18_ARATH	1.7e-27	37.74	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
sp\|Q6H543\|IAA7_ORYSJ	4.4e-23	54.10	Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 P...	[more]
sp\|Q8LQ74\|IAA6_ORYSJ	7.8e-20	31.10	Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA6 P...	[more]
sp\|Q5W670\|IAA18_ORYSJ	1.7e-19	40.76	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]

BLAST of Carg06462 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIC1\|A0A1S3BIC1_CUCME	4.5e-113	79.09	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1	[more]
tr\|A0A0A0L8D0\|A0A0A0L8D0_CUCSA	5.8e-113	78.71	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G444560 PE=3 SV=1	[more]
tr\|A0A1U8KAQ4\|A0A1U8KAQ4_GOSHI	2.8e-62	52.94	Auxin-responsive protein OS=Gossypium hirsutum OX=3635 GN=LOC107913884 PE=3 SV=1	[more]
tr\|A0A0D2RI71\|A0A0D2RI71_GOSRA	2.3e-61	52.60	Auxin-responsive protein OS=Gossypium raimondii OX=29730 GN=B456_011G070800 PE=3...	[more]
tr\|A0A0D2T3T9\|A0A0D2T3T9_GOSRA	2.3e-61	52.60	Auxin-responsive protein OS=Gossypium raimondii OX=29730 GN=B456_011G070800 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06462-RA	Carg06462-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 197..265 e-value: 7.1E-15 score: 56.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..147
None	No IPR available	PANTHER	PTHR31734:SF2	AUXIN-RESPONSIVE PROTEIN IAA18-RELATED	coord: 4..264
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 44..252 e-value: 4.6E-34 score: 118.3
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 4..264
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 202..285 score: 11.349

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06462	Cla012649	Watermelon (97103) v1	carwmB0120
Carg06462	Csa3G444560	Cucumber (Chinese Long) v2	carcuB0126
Carg06462	MELO3C013003	Melon (DHL92) v3.5.1	carmeB0125
Carg06462	ClCG07G013340	Watermelon (Charleston Gray)	carwcgB0121
Carg06462	CSPI03G23800	Wild cucumber (PI 183967)	carcpiB0131
Carg06462	CmaCh14G012890	Cucurbita maxima (Rimu)	carcmaB0154
Carg06462	CmaCh01G000940	Cucurbita maxima (Rimu)	carcmaB0157
Carg06462	CmoCh14G013230	Cucurbita moschata (Rifu)	carcmoB0163
Carg06462	CmoCh01G000950	Cucurbita moschata (Rifu)	carcmoB0166
Carg06462	Lsi07G005270	Bottle gourd (USVL1VR-Ls)	carlsiB109
Carg06462	Cp4.1LG03g14120	Cucurbita pepo (Zucchini)	carcpeB0176
Carg06462	Cp4.1LG02g14400	Cucurbita pepo (Zucchini)	carcpeB0175
Carg06462	CsGy3G022730	Cucumber (Gy14) v2	carcgybB0125
Carg06462	MELO3C013003.2	Melon (DHL92) v3.6.1	carmedB0128
Carg06462	CsaV3_3G023550	Cucumber (Chinese Long) v3	carcucB0135
Carg06462	Cla97C07G140170	Watermelon (97103) v2	carwmbB0126
Carg06462	Bhi01G002610	Wax gourd	carwgoB0138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06462	Carg04280	Silver-seed gourd	carcarB139

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06462	Wax gourd	carwgoB0151
Carg06462	Silver-seed gourd	carcarB140
Carg06462	Silver-seed gourd	carcarB143
Carg06462	Silver-seed gourd	carcarB145
Carg06462	Cucumber (Gy14) v2	carcgybB0124
Carg06462	Cucumber (Gy14) v2	carcgybB0128
Carg06462	Cucumber (Gy14) v1	carcgyB0144
Carg06462	Cucumber (Gy14) v1	carcgyB0145
Carg06462	Cucurbita maxima (Rimu)	carcmaB0155
Carg06462	Cucurbita maxima (Rimu)	carcmaB0160
Carg06462	Cucurbita moschata (Rifu)	carcmoB0164
Carg06462	Cucurbita moschata (Rifu)	carcmoB0169
Carg06462	Cucurbita pepo (Zucchini)	carcpeB0171
Carg06462	Cucurbita pepo (Zucchini)	carcpeB0173
Carg06462	Wild cucumber (PI 183967)	carcpiB0129
Carg06462	Wild cucumber (PI 183967)	carcpiB0134
Carg06462	Cucumber (Chinese Long) v2	carcuB0124
Carg06462	Cucumber (Chinese Long) v3	carcucB0134
Carg06462	Cucumber (Chinese Long) v3	carcucB0138
Carg06462	Bottle gourd (USVL1VR-Ls)	carlsiB105
Carg06462	Melon (DHL92) v3.5.1	carmeB0120
Carg06462	Melon (DHL92) v3.6.1	carmedB0130
Carg06462	Melon (DHL92) v3.6.1	carmedB0123
Carg06462	Watermelon (Charleston Gray)	carwcgB0119
Carg06462	Watermelon (97103) v2	carwmbB0123
Carg06462	Watermelon (97103) v2	carwmbB0124
Carg06462	Watermelon (97103) v2	carwmbB0129