Carg06419 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAAAGTTTGATGTTCCTGAGTAGTATAATGTTTGCATTGCTTTTCCTGTAACCCATTTTTGAACATGCCTTTTTCATTCCTTTATATAACTTATTTTCCAATCAGGCGTATGATCCACAGGCTGGTTATGATATACCTTATTTCAGACCGACAGTAGATGAAACTGTACGGGTGCAAGGACTACCGTCTCAGGATGTAAGTGTAGTTGTTTACATAATATCTGGCGTGTTCATTATTATCTGGATTTCTGTGAAATGAATACGGACACGTGTTTGAGTTTCTAATGATTGTAACTTATAATTGTTATGATTATTTTCTGAGCTAGTAGTTTGTTCCACTGCTGGCAGTAGTATTTTTTTTGTTCTCACTTATCAAATCTCTGACCCTAGGCGGTTAACTCTCAAACTGCTAACGGCATATCTCCATCAACGATTCCAATGGTGCAACAGCAGCAAACTCCAGTTGCTCAGATGTATCCACAAGTTCATGTTTCCCATTTTGCAAACCTCATGCCATATCGACAATTCATATCTCCTGTTTATGTTCCACCAATGGCCATGCCTGGTTATTCTAGTTCCCCAGCATACCCTCATCCGTCCAATGGTAACAGTTACGTACTAATGCCCGGTGGAAGTACTCACATGAATGCAAATAACCTGAAGTATGGACTCCAGCAGTTCAAGCCTGTTCCTGCTGGCAGTCCGGCAGGGTTTGGGAACTTCAATAGTCCTGCTGGTCTTTCTGTAAATGCTCCTGGTGTAGTTGGGAGTGCAACCGGACTGGAAGATGCATCTCGAATCAAATACAAAGATGGAAACCTTTATGTCCCAAATGCACAGGTTAGTAATTGTCATTGCCATGGTTTGGCTGTAGCTTTGTTGCCTTACATGCAAGCTTATAATTAACTTGATATCATTTCATATGGGTTGTTAGTGCGTATGACATTATTTAGAAGGGGAAAAGACCTCGTCTTGTAGAAGTTTTTGTGTGTGGGTTGGGGGGGGGGGACCTTTACCGTCAAGTGCAAATGACACCCTGACATGTTTGTTTAATCTGGATCATCATGATATCAGCCGCTCTCAAGCCATTCAGACCTTTTATAATTATAATATAAAGTAGTTTAATGTATTAGTATATTTGTTATTACAGGCTGAGACATCTGAAATTTGGATCCAAAACCCAAGAGATCTTCCAGGTTTACAATCGGCTCCATATTACAACATGCCTGGGCAAACTCCTCATGGTGCTTATTTGCCCTCTCATACTGGGCACGCTTCCTTCAGTGCAGCTGTGGCGCAGTCTACACACATGCAATTTCCTGGATTGTACCATCCACCTCCACAACCTGCTGCTATTGGAAATCCTCATCACATGGGGCCTGGTATGGGTGGGAATGTTGGAGTGGCTGCTGCCACTCCTGGGCCACAAGTTGGTACTTTCCAGCAGCCACAGTTGGGTCATCTTAATTGGACAACTAATTTCTAGACAAATGAAGAACGAGAATTGTGAAACTAACCCCGCCCCCCTTTATTATTATACAAGGGATTGAAGTAGTCATAAATGTTTAATATTTTGTCAAATGTGTAATTGATAACCTTCTCATATTCAATGTAGTATGCGGTTTTCTCCATTTGCATCTATTTCATCTGCTGTTTTAGTTACCCATTCGTCATCCTAGCTATAATAATCAAGTAGAAGGAGAAGCTTCTGTAGGATTTAACAGAGCTACACAGGTGGATAAAGCCAAGCCCTATGGATTAGAACAAAATACTTGGTGCTAGCAATGCGCTTAAGCTGCTTTTCCAAATTATTTGCATCTAGCATTGCTTTTCTTAATTTTAACTCGTTAGAACCTTATTAGAAACATCAGTTGTTAATATTGCAGGTATTAATTGGAAAATGTTGGTTTAGGAGTTTTATGTTGCAATGTACCTGTGGTGGCCCTGCGGGAGAATGGTCAAGGTGAAGTCTCTGAACATTTGAATCTAATATTACTGTGTTCGTATTGAAAGATGTCAATTAATAAAGAAGGTAACCAGCTGTGGTTTCTGGATCCCTTCCATATGCGTAGCTTCAATGGTGATCAGG ATGGCGTATGATCCACAGGCTGGTTATGATATACCTTATTTCAGACCGACAGTAGATGAAACTGTACGGGTGCAAGGACTACCGTCTCAGGATGCGGTTAACTCTCAAACTGCTAACGGCATATCTCCATCAACGATTCCAATGGTGCAACAGCAGCAAACTCCAGTTGCTCAGATGTATCCACAAGTTCATGTTTCCCATTTTGCAAACCTCATGCCATATCGACAATTCATATCTCCTGTTTATGTTCCACCAATGGCCATGCCTGGTTATTCTAGTTCCCCAGCATACCCTCATCCGTCCAATGGTAACAGTTACGTACTAATGCCCGGTGGAAGTACTCACATGAATGCAAATAACCTGAAGTATGGACTCCAGCAGTTCAAGCCTGTTCCTGCTGGCAGTCCGGCAGGGTTTGGGAACTTCAATAGTCCTGCTGGTCTTTCTGTAAATGCTCCTGGTGTAGTTGGGAGTGCAACCGGACTGGAAGATGCATCTCGAATCAAATACAAAGATGGAAACCTTTATGTCCCAAATGCACAGGCTGAGACATCTGAAATTTGGATCCAAAACCCAAGAGATCTTCCAGGTTTACAATCGGCTCCATATTACAACATGCCTGGGCAAACTCCTCATGGTGCTTATTTGCCCTCTCATACTGGGCACGCTTCCTTCAGTGCAGCTGTGGCGCAGTCTACACACATGCAATTTCCTGGATTGTACCATCCACCTCCACAACCTGCTGCTATTGGAAATCCTCATCACATGGGGCCTGGTATGGGTGGGAATGTTGGAGTGGCTGCTGCCACTCCTGGGCCACAAGTTGGTACTTTCCAGCAGCCACAGTTGGGTCATCTTAATTGGACAACTAATTTCTAGACAAATGAAGAACGAGAATTGTGAAACTAACCCCGCCCCCCTTTATTATTATACAAGGGATTGAAGTAGTCATAAATGTTTAATATTTTGTCAAATGTGTAATTGATAACCTTCTCATATTCAATGTAGTATGCGGTTTTCTCCATTTGCATCTATTTCATCTGCTGTTTTAGTTACCCATTCGTCATCCTAGCTATAATAATCAAGTAGAAGGAGAAGCTTCTGTAGGATTTAACAGAGCTACACAGGTGGATAAAGCCAAGCCCTATGGATTAGAACAAAATACTTGGTGCTAGCAATGCGCTTAAGCTGCTTTTCCAAATTATTTGCATCTAGCATTGCTTTTCTTAATTTTAACTCGTTAGAACCTTATTAGAAACATCAGTTGTTAATATTGCAGGTATTAATTGGAAAATGTTGGTTTAGGAGTTTTATGTTGCAATGTACCTGTGGTGGCCCTGCGGGAGAATGGTCAAGGTGAAGTCTCTGAACATTTGAATCTAATATTACTGTGTTCGTATTGAAAGATGTCAATTAATAAAGAAGGTAACCAGCTGTGGTTTCTGGATCCCTTCCATATGCGTAGCTTCAATGGTGATCAGG ATGGCGTATGATCCACAGGCTGGTTATGATATACCTTATTTCAGACCGACAGTAGATGAAACTGTACGGGTGCAAGGACTACCGTCTCAGGATGCGGTTAACTCTCAAACTGCTAACGGCATATCTCCATCAACGATTCCAATGGTGCAACAGCAGCAAACTCCAGTTGCTCAGATGTATCCACAAGTTCATGTTTCCCATTTTGCAAACCTCATGCCATATCGACAATTCATATCTCCTGTTTATGTTCCACCAATGGCCATGCCTGGTTATTCTAGTTCCCCAGCATACCCTCATCCGTCCAATGGTAACAGTTACGTACTAATGCCCGGTGGAAGTACTCACATGAATGCAAATAACCTGAAGTATGGACTCCAGCAGTTCAAGCCTGTTCCTGCTGGCAGTCCGGCAGGGTTTGGGAACTTCAATAGTCCTGCTGGTCTTTCTGTAAATGCTCCTGGTGTAGTTGGGAGTGCAACCGGACTGGAAGATGCATCTCGAATCAAATACAAAGATGGAAACCTTTATGTCCCAAATGCACAGGCTGAGACATCTGAAATTTGGATCCAAAACCCAAGAGATCTTCCAGGTTTACAATCGGCTCCATATTACAACATGCCTGGGCAAACTCCTCATGGTGCTTATTTGCCCTCTCATACTGGGCACGCTTCCTTCAGTGCAGCTGTGGCGCAGTCTACACACATGCAATTTCCTGGATTGTACCATCCACCTCCACAACCTGCTGCTATTGGAAATCCTCATCACATGGGGCCTGGTATGGGTGGGAATGTTGGAGTGGCTGCTGCCACTCCTGGGCCACAAGTTGGTACTTTCCAGCAGCCACAGTTGGGTCATCTTAATTGGACAACTAATTTCTAG MAYDPQAGYDIPYFRPTVDETVRVQGLPSQDAVNSQTANGISPSTIPMVQQQQTPVAQMYPQVHVSHFANLMPYRQFISPVYVPPMAMPGYSSSPAYPHPSNGNSYVLMPGGSTHMNANNLKYGLQQFKPVPAGSPAGFGNFNSPAGLSVNAPGVVGSATGLEDASRIKYKDGNLYVPNAQAETSEIWIQNPRDLPGLQSAPYYNMPGQTPHGAYLPSHTGHASFSAAVAQSTHMQFPGLYHPPPQPAAIGNPHHMGPGMGGNVGVAAATPGPQVGTFQQPQLGHLNWTTNF
BLAST of Carg06419 vs. NCBI nr
Match: XP_023529019.1 (uncharacterized protein LOC111791777 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599.4 bits (1544), Expect = 6.7e-168 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg06419 vs. NCBI nr
Match: XP_023529020.1 (uncharacterized protein LOC111791777 isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599.4 bits (1544), Expect = 6.7e-168 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg06419 vs. NCBI nr
Match: XP_023529017.1 (uncharacterized protein LOC111791777 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599.4 bits (1544), Expect = 6.7e-168 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg06419 vs. NCBI nr
Match: XP_023529018.1 (GBF-interacting protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599.4 bits (1544), Expect = 6.7e-168 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg06419 vs. NCBI nr
Match: XP_022955784.1 (uncharacterized protein LOC111457669 isoform X4 [Cucurbita moschata]) HSP 1 Score: 598.2 bits (1541), Expect = 1.5e-167 Identity = 288/291 (98.97%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Carg06419 vs. TAIR10
Match: AT3G13990.1 (Kinase-related protein of unknown function (DUF1296)) HSP 1 Score: 380.2 bits (975), Expect = 1.2e-105 Identity = 193/298 (64.77%), Postives = 226/298 (75.84%), Query Frame = 0
BLAST of Carg06419 vs. TrEMBL
Match: tr|A0A1S3CKI6|A0A1S3CKI6_CUCME (uncharacterized protein LOC103501996 OS=Cucumis melo OX=3656 GN=LOC103501996 PE=4 SV=1) HSP 1 Score: 577.8 bits (1488), Expect = 1.4e-161 Identity = 275/291 (94.50%), Postives = 285/291 (97.94%), Query Frame = 0
BLAST of Carg06419 vs. TrEMBL
Match: tr|A0A0A0LCP5|A0A0A0LCP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846060 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 2.2e-159 Identity = 275/300 (91.67%), Postives = 285/300 (95.00%), Query Frame = 0
BLAST of Carg06419 vs. TrEMBL
Match: tr|A0A2N9J0A7|A0A2N9J0A7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58110 PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 7.7e-136 Identity = 236/295 (80.00%), Postives = 264/295 (89.49%), Query Frame = 0
BLAST of Carg06419 vs. TrEMBL
Match: tr|W9QL32|W9QL32_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013447 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 3.0e-132 Identity = 235/297 (79.12%), Postives = 260/297 (87.54%), Query Frame = 0
BLAST of Carg06419 vs. TrEMBL
Match: tr|A5AXI2|A5AXI2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042555 PE=4 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 1.5e-131 Identity = 234/298 (78.52%), Postives = 258/298 (86.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |