Carg06306 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06306
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutamyl-trna reductase-binding protein, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_016 : 883400 .. 887814 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACGAGTTGATTCTCTTTCGGCACAGTGATTCTCATCCTATTATCATCGAGACGAATTTCTCAATCCTTCTCAACAAATTCGAAGATAGAAGCTGAAATTCGTCAGTTCTGAAGCTCTAGGGTGATTTTGGAGCTTTTCACCAAATGCATCTTCAAGCTCAAACTCTCACGAATCAGTTCGCGCCTTCTGTCGCTCCATTAAAATCAACCTCGAAATCTCGATTCGCTTATCCAAAAGGATGCCGATTTCGTAGATTTTCGTTTCGGGCTTTGAAATGTTCTGTTTCGGCGATTTCTGAGTTGGCTCCGACGGAACTGCGGAATGTGAAGCCGTTCCCGGCTGAGGTTTCGAGGACAATTATGGAGTTATCTTCTGTTGGAACGCTTTCTTCTTTGAGCCATGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGACGGTACGCCTCTTTTGAGCTTGAATGAATCTATGCGGGAGTTCTCCATCGACAGGAGGTCCAGCCTCCATGTTCAGGTTCTTCATTTTATTGAGATACTAACGATAATGTTCATTTCTATGGATATATACGTCGTATGTACAGGCTCCAAGTGGAATTATGTGAAAATGAAGATGAAATCTCTGAATCGACTCAAGTTTATTTTGTTTCCGTTTGAATTCATGAATTGAAAGTTGTTTATAGATATTAAAGAAATATAGAGATTGCTGTCACTAATTTACATGTTTCTGATGTAAACTTGCTTATGTTTGCCATTCTTCTTTTGAGCAGTTGGAACAATGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTCTTGATAAACCAGACAACAAAATGAATTTGAAGGTACAATTATCCGCAGTCCCCGGATTTTCCTTTTAGCATTTTTTTTAGGAATTAATCTGTTGCTACCGGGCTGAATTCTGGCTTAGCTAGCTAGAACTGTGGTCATTGTTTGCAAGTTCCAGTGGAAGAATTATTTCGTTCCTCCTTTAACGAGATTGCTCTAAGCTATTAGTCCTCATAAATGATTGTGTTTTACTATTAACGATAGTTTATGCTTATGATGGGAACAATACTATTTCTAATGTAAAGTGGCTATTGCTTTGAAGAATTTTTTTATGCCTGAGTTGGTTCAGTGTTTAAAGAGAAATCTGAAAATTTGATGCCTTTCTAAATCTGGGTTGAGTGCAAGGTTGAATTTCTCTGGATTTCATACTTCGAAACCTTCGATGGAAAATCGATGGAACTAGAACTATGGAATCCAATTACAGGAATGCATTTGTAGAAGGAACTTTTGTTTTTCAAAAGGAGGTCGTTTAACTCAATGTTTAGCTATTTTTTTTTTCAGTTTACCAATTTAGTTTCTATCCTTTTTTTGAATAGATGTCATTGAAGTTGAAACTAATAGTGGAAGGAGAAATTTTCTTTGGAAGGGAAGTAAGGAAAGGTCGATCATTTAGTCAGTTCGAACACTGTTTCAAGAAGCCTCTACAAAATGGAGGATAGGAAACAGGCAATCTAGAGAAATAATGGGTACTTTCTACGTTGCTTTGGAGATATCCAAGAGATAGCAACGTGTTGAGGAATAAAGTGGTTACTGACATTTATGGTAAGGAAGAAGTGGTGGTTCACAAAACTAAGGAAATTTGGTTTTTCTGGAAGCCTTTGGTGGGACTTGAAGGTTACATGGACATATTTTTTACTTCCCAGTAATAGAGTTGGGAATTGATGAAAGGACTTTGTCTTGGGATTACATTTGGGTAGGAAAATCACTTGCCATCTTGTAGCTTCCTCAGTATTTCAAGGTGCCCGACCTAAAAATGCTTATGCTCGGGACCAGCGGACCAGCGGGAAGTTAATATCAAATTGTGGAGAGTTCTAGTAAGAAGGTAACTAATAGATGAGGAAAAGGAGAGGGAGAGGTTTTGTACAAAGTCTGCATAATGTACAGCCGGGTTGTTTGGAGGACAAAAGGATTGTGAGATCTCACTTCGGTTGGAGAGAAGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGAGTTTTAAAACCTTGAGGGGAAGCCCGGAAGGAAAAGCCCAAAGAAGACAATATTTGCTAGCTGTGGGCTAGAGCGGTTATGAATGGTATCAGAGCCAGGCACTGGATGATGTGTCAGCAAGGAGGCTGAGCCCTGAAGGGGGGTGGATTGTAAGATCCCATATTAGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGAAAACCTCTACCTAGCAGACACGTTTTAAAACCTTAAAGGGAAGCCCGAAAGGGAAAACCTACAGAGGGCAATATCTGCTAGCGGTAAGCCTGGACTATTTCCTCCTTCCTTTAGGCTCATTCAGTAAAATCACTGGGGAGCTTTCTAGATCGCTTTTTTCTACCAAGTGCCAAGATTTATCAAGTCATTTAGGAAATACTATGCTCAAAGAAGTTAAAATTTCTGGTATGGACTGTATAAAGTCATGTAGTAGTTATATTGCAGATGAATTGCAACAGAAATGCCCTTTCGTGGCTCTGAAAGGAGTTGGGTATGTACTGTAAAGTCTTGTTCTTTTAGTGTCTGTTCCTCTGGCTCCATAATGGCGTGGGGGTGCTACCAAAGTGCCATCTTCACTCGATCCTCCTTCCCTCTTCTGACAACAAGATGTTGCAAGTTTTTTCAAGTTTTGTTTTCTTTTCGTTCTTGTACTTGTGATTTAGTAGCTTTTGGATTGTTATACTAGCTATTGTTCTATAACTGTTCAATATCGTTCTTGTGAGATTCCACATCGGTTTGAGAGAGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTCAAAACCTTGAGAGAAAGCTCAAAAAGGACAATATTTACTACCGGTGGGCTTGGACTGTTACAAATGGTATCAGAGCTAAACACCGAGCGGTGTGCCAACAAGGACGTTGGGCCCCAAGGGGGATGGATTGTGAGATCCCACGTCGGTTGGAGAGGTGAATTGAAGCATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGCAGACACGTTTTAAAACCTTGAGAGGAAACTTGAAAGGGAAAGCCCGAAGAGAACAATATCTGTTAGCGGTGTGCTTGGGCTGTTATAGTTCTATACTCATAATATTGGATCAACTCTTTATTAACTGTGACGCCATGTTTTTCAGCGGCTTCATACTACATGGAAAAAGAGATTTGGAGAAGACATTAATGAAGACCTTCTGTATATTGTTAGTGTCGAGAGAGTACTTCAGATAGATGACTTTGGGGAGGTACAAACGTCGTTTTCTGCACTCGTTGCTTTTACGCAGCGTGCCTAATCCAGGACCAGTTTCGACGCACTAGAACATAGAGACGTTTGTTCGAATAATAATCTAATACTTCATACTGTTTCAGGTTGGGGTTCTGGTAAACTCTTCAGATTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTTTGCAGAAAGACTAGTGAACGAGATAAACACGAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCCGATTTGAACTTTGAGGTTTGCTACTGTCGTCTTCGGGTTCTTATTTGATTCTAAACTCACCAGGAGATCTAGTTTTATTCACATTGCTTGTAGATAGCGTTATTCATATTGAAATTTATAAGCACACTTAAATTCTATGGGCAGATGGTTCATGCAGGCTAATCAATCTTCTTTTAACTCGTAGTCCAGATCCCGTTATCACATAATAATCCCGAAATCCCTTTCTAGATAGAATTCTCACGGTTCTCCATTTTTCTCGGCAGTTTACAGAAGCAAAGCTGATATGGATTGATCGGTTAGGCTTCGACCTGCGCGTATTCTCTCCTCAAAAGGGGACGTTTGAATTTCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAGGGTGCGAAGTCGACGTTTAACGGCCTGTCCCAACAGGCTTGGGAGGTGGAAAGGAATTTCCAAGCTCTGGATTTTGAGAAGGTGAAGCAATTCAAGATGGTAAGACCATTGCATAGTTTAGAGTAGCTATGATGTGCTTTCTTTTTGCTCTCTTTAAAGCTTGTGCTGTTTATGAAAGAACTGAGTGGTTGCTTAATGTGTGAGTATGAGAAGTTGAGTTATGTTTTGGCCAAATTGTCTTAGGGTAGAACTGAATGAATAGCTTGTTTATCGTATTCACAATTTTTTTATTTAACGTGTTTGGTTACACTTTTTCGAACGTTCTTTTATACATTCATTTGCTTGGTTTGCCTCGAGTTGTTAAAATAGATGTCTATTAAACTCTGTAAACTATTAACTTCAAATTTGTGTTTAAGACACTGACCACT

mRNA sequence

CTCACGAGTTGATTCTCTTTCGGCACAGTGATTCTCATCCTATTATCATCGAGACGAATTTCTCAATCCTTCTCAACAAATTCGAAGATAGAAGCTGAAATTCGTCAGTTCTGAAGCTCTAGGGTGATTTTGGAGCTTTTCACCAAATGCATCTTCAAGCTCAAACTCTCACGAATCAGTTCGCGCCTTCTGTCGCTCCATTAAAATCAACCTCGAAATCTCGATTCGCTTATCCAAAAGGATGCCGATTTCGTAGATTTTCGTTTCGGGCTTTGAAATGTTCTGTTTCGGCGATTTCTGAGTTGGCTCCGACGGAACTGCGGAATGTGAAGCCGTTCCCGGCTGAGGTTTCGAGGACAATTATGGAGTTATCTTCTGTTGGAACGCTTTCTTCTTTGAGCCATGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGACGGTACGCCTCTTTTGAGCTTGAATGAATCTATGCGGGAGTTCTCCATCGACAGGAGGTCCAGCCTCCATGTTCAGTTGGAACAATGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTCTTGATAAACCAGACAACAAAATGAATTTGAAGCGGCTTCATACTACATGGAAAAAGAGATTTGGAGAAGACATTAATGAAGACCTTCTGTATATTGTTAGTGTCGAGAGAGTACTTCAGATAGATGACTTTGGGGAGGTTGGGGTTCTGGTAAACTCTTCAGATTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTTTGCAGAAAGACTAGTGAACGAGATAAACACGAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCCGATTTGAACTTTGAGTTTACAGAAGCAAAGCTGATATGGATTGATCGGTTAGGCTTCGACCTGCGCGTATTCTCTCCTCAAAAGGGGACGTTTGAATTTCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAGGGTGCGAAGTCGACGTTTAACGGCCTGTCCCAACAGGCTTGGGAGGTGGAAAGGAATTTCCAAGCTCTGGATTTTGAGAAGGTGAAGCAATTCAAGATGGTAAGACCATTGCATAGTTTAGAGTAGCTATGATGTGCTTTCTTTTTGCTCTCTTTAAAGCTTGTGCTGTTTATGAAAGAACTGAGTGGTTGCTTAATGTGTGAGTATGAGAAGTTGAGTTATGTTTTGGCCAAATTGTCTTAGGGTAGAACTGAATGAATAGCTTGTTTATCGTATTCACAATTTTTTTATTTAACGTGTTTGGTTACACTTTTTCGAACGTTCTTTTATACATTCATTTGCTTGGTTTGCCTCGAGTTGTTAAAATAGATGTCTATTAAACTCTGTAAACTATTAACTTCAAATTTGTGTTTAAGACACTGACCACT

Coding sequence (CDS)

ATGCATCTTCAAGCTCAAACTCTCACGAATCAGTTCGCGCCTTCTGTCGCTCCATTAAAATCAACCTCGAAATCTCGATTCGCTTATCCAAAAGGATGCCGATTTCGTAGATTTTCGTTTCGGGCTTTGAAATGTTCTGTTTCGGCGATTTCTGAGTTGGCTCCGACGGAACTGCGGAATGTGAAGCCGTTCCCGGCTGAGGTTTCGAGGACAATTATGGAGTTATCTTCTGTTGGAACGCTTTCTTCTTTGAGCCATGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGACGGTACGCCTCTTTTGAGCTTGAATGAATCTATGCGGGAGTTCTCCATCGACAGGAGGTCCAGCCTCCATGTTCAGTTGGAACAATGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTCTTGATAAACCAGACAACAAAATGAATTTGAAGCGGCTTCATACTACATGGAAAAAGAGATTTGGAGAAGACATTAATGAAGACCTTCTGTATATTGTTAGTGTCGAGAGAGTACTTCAGATAGATGACTTTGGGGAGGTTGGGGTTCTGGTAAACTCTTCAGATTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTTTGCAGAAAGACTAGTGAACGAGATAAACACGAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCCGATTTGAACTTTGAGTTTACAGAAGCAAAGCTGATATGGATTGATCGGTTAGGCTTCGACCTGCGCGTATTCTCTCCTCAAAAGGGGACGTTTGAATTTCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAGGGTGCGAAGTCGACGTTTAACGGCCTGTCCCAACAGGCTTGGGAGGTGGAAAGGAATTTCCAAGCTCTGGATTTTGAGAAGGTGAAGCAATTCAAGATGGTAAGACCATTGCATAGTTTAGAGTAG

Protein sequence

MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRNVKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDRRSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVERVLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEFTEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQALDFEKVKQFKMVRPLHSLE

Homology

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BLAST of Carg06306 vs. NCBI nr
Match: XP_022949152.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 643.3 bits (1658), Expect = 4.5e-181
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN
Sbjct: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR
Sbjct: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF
Sbjct: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ
Sbjct: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300

Query: 301 ALDFEKVKQFKMVRPLHSLE 321
           ALDFEKVKQFKMVRPLHSLE
Sbjct: 301 ALDFEKVKQFKMVRPLHSLE 320

[Close]

BLAST of Carg06306 vs. NCBI nr
Match: XP_023540789.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.0 bits (1652), Expect = 2.2e-180
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQFAPSVAPLKSTSKSRFAYP GCRFRRFSFRALKCSVSAISELAPTELRN
Sbjct: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPDGCRFRRFSFRALKCSVSAISELAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR
Sbjct: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF
Sbjct: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ
Sbjct: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300

Query: 301 ALDFEKVKQFKMVRPLHSLE 321
           ALDFEKVKQFKMVRPLHSLE
Sbjct: 301 ALDFEKVKQFKMVRPLHSLE 320

[Close]

BLAST of Carg06306 vs. NCBI nr
Match: XP_022974735.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 637.5 bits (1643), Expect = 2.4e-179
Identity = 317/320 (99.06%), Postives = 318/320 (99.38%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQFAPSVAPLKSTSKSRFAYP GCRFRRFSFRALKCSVSAISELAPTELRN
Sbjct: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPNGCRFRRFSFRALKCSVSAISELAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR
Sbjct: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF
Sbjct: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           TEAKLIWIDRLGFDLRVFSPQ GTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ
Sbjct: 241 TEAKLIWIDRLGFDLRVFSPQNGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300

Query: 301 ALDFEKVKQFKMVRPLHSLE 321
           AL+FEKVKQFKMVRPLHSLE
Sbjct: 301 ALNFEKVKQFKMVRPLHSLE 320

[Close]

BLAST of Carg06306 vs. NCBI nr
Match: XP_022147073.1 (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 570.9 bits (1470), Expect = 2.8e-159
Identity = 280/320 (87.50%), Postives = 299/320 (93.44%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQFAP VAPLK TSKSRFA    CRFR+ S+RAL CSVS I E APTELRN
Sbjct: 1   MHLQAQTLTNQFAPFVAPLKPTSKSRFASLNACRFRKISYRALTCSVSTICESAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKP PAEVSRTIMELSSVGTLSSL+ EGWPLG+GVRFAVDQDGTPLLSLNES+RE SIDR
Sbjct: 61  VKPLPAEVSRTIMELSSVGTLSSLTQEGWPLGIGVRFAVDQDGTPLLSLNESLRELSIDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGSL KPDNKM LK+LHTTWKKRFGE+INED+LYIV+V+R
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSLGKPDNKMILKQLHTTWKKRFGEEINEDILYIVTVDR 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGV VNSSDYKTASPDPLRNFAERLV+EINTNNAEDV+RFCNIYADLNF+F
Sbjct: 181 VLQIDDFGEVGVWVNSSDYKTASPDPLRNFAERLVDEINTNNAEDVHRFCNIYADLNFQF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
            EAKLIW+DRLGFDLRVFSPQKGTFEFRIPFP EVTDEKGAKS FNG+SQQAWEVERNFQ
Sbjct: 241 AEAKLIWVDRLGFDLRVFSPQKGTFEFRIPFPSEVTDEKGAKSMFNGMSQQAWEVERNFQ 300

Query: 301 ALDFEKVKQFKMVRPLHSLE 321
           ALDFE+VKQ KM++PLHS+E
Sbjct: 301 ALDFERVKQLKMIKPLHSVE 320

[Close]

BLAST of Carg06306 vs. NCBI nr
Match: XP_022147074.1 (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 565.8 bits (1457), Expect = 9.0e-158
Identity = 280/320 (87.50%), Postives = 298/320 (93.12%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQFAP VAPLK TSKSRFA    CRFR+ S+RAL CSVS I E APTELRN
Sbjct: 1   MHLQAQTLTNQFAPFVAPLKPTSKSRFASLNACRFRKISYRALTCSVSTICESAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKP PAEVSRTIMELSSVGTLSSL+ EGWPLG+GVRFAVDQDGTPLLSLNES+RE SIDR
Sbjct: 61  VKPLPAEVSRTIMELSSVGTLSSLTQEGWPLGIGVRFAVDQDGTPLLSLNESLRELSIDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGSL KPDNKM LK LHTTWKKRFGE+INED+LYIV+V+R
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSLGKPDNKMILK-LHTTWKKRFGEEINEDILYIVTVDR 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGV VNSSDYKTASPDPLRNFAERLV+EINTNNAEDV+RFCNIYADLNF+F
Sbjct: 181 VLQIDDFGEVGVWVNSSDYKTASPDPLRNFAERLVDEINTNNAEDVHRFCNIYADLNFQF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
            EAKLIW+DRLGFDLRVFSPQKGTFEFRIPFP EVTDEKGAKS FNG+SQQAWEVERNFQ
Sbjct: 241 AEAKLIWVDRLGFDLRVFSPQKGTFEFRIPFPSEVTDEKGAKSMFNGMSQQAWEVERNFQ 300

Query: 301 ALDFEKVKQFKMVRPLHSLE 321
           ALDFE+VKQ KM++PLHS+E
Sbjct: 301 ALDFERVKQLKMIKPLHSVE 319

[Close]

BLAST of Carg06306 vs. TAIR10
Match: AT3G21200.1 (proton gradient regulation 7)

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-100
Identity = 187/313 (59.74%), Postives = 232/313 (74.12%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           M LQ Q+      PS    K   +  F   K    R  S   L+CSVS   +  P     
Sbjct: 1   MQLQTQSFALNLLPSPNFAKPIERREFISLKRDPSRPIS---LRCSVSTTLD-TPATAST 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
            KPFPAEVSR+IMELSSVGTLS+L+H+GWPLGVGVRFAVD+DGTP+L LN S+   S D+
Sbjct: 61  HKPFPAEVSRSIMELSSVGTLSTLTHDGWPLGVGVRFAVDKDGTPVLCLNRSV---SPDK 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RS+LHVQLEQCGLRTPQCTIQGS+ +P +   LKRL  TW+++FGE++ ED LY+V+V+R
Sbjct: 121 RSALHVQLEQCGLRTPQCTIQGSIGRPGDDTVLKRLSATWREKFGEEVKEDSLYVVAVDR 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQ++DF E G+ V SSDYK ASPDPLR+ AE +VN+IN NN ED+ RFCN+Y DL+F  
Sbjct: 181 VLQMEDFMEDGIWVASSDYKNASPDPLRDIAEDIVNQINANNMEDIFRFCNVYVDLDFVV 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           +E K+IW+DRLGFDLRV+SP +G ++ RIPFP EVTDEKGAKS+FNG+SQ AWEVE+++ 
Sbjct: 241 SETKMIWMDRLGFDLRVWSP-RGVYDVRIPFPMEVTDEKGAKSSFNGMSQLAWEVEKSYC 300

Query: 301 ALDFEKVKQFKMV 314
             DF KVK  K V
Sbjct: 301 PADFNKVKLLKQV 305

[Close]

BLAST of Carg06306 vs. Swiss-Prot
Match: sp|Q9LU39|GLUBP_ARATH (Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLUTRBP PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.8e-99
Identity = 187/313 (59.74%), Postives = 232/313 (74.12%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           M LQ Q+      PS    K   +  F   K    R  S   L+CSVS   +  P     
Sbjct: 1   MQLQTQSFALNLLPSPNFAKPIERREFISLKRDPSRPIS---LRCSVSTTLD-TPATAST 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
            KPFPAEVSR+IMELSSVGTLS+L+H+GWPLGVGVRFAVD+DGTP+L LN S+   S D+
Sbjct: 61  HKPFPAEVSRSIMELSSVGTLSTLTHDGWPLGVGVRFAVDKDGTPVLCLNRSV---SPDK 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RS+LHVQLEQCGLRTPQCTIQGS+ +P +   LKRL  TW+++FGE++ ED LY+V+V+R
Sbjct: 121 RSALHVQLEQCGLRTPQCTIQGSIGRPGDDTVLKRLSATWREKFGEEVKEDSLYVVAVDR 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQ++DF E G+ V SSDYK ASPDPLR+ AE +VN+IN NN ED+ RFCN+Y DL+F  
Sbjct: 181 VLQMEDFMEDGIWVASSDYKNASPDPLRDIAEDIVNQINANNMEDIFRFCNVYVDLDFVV 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           +E K+IW+DRLGFDLRV+SP +G ++ RIPFP EVTDEKGAKS+FNG+SQ AWEVE+++ 
Sbjct: 241 SETKMIWMDRLGFDLRVWSP-RGVYDVRIPFPMEVTDEKGAKSSFNGMSQLAWEVEKSYC 300

Query: 301 ALDFEKVKQFKMV 314
             DF KVK  K V
Sbjct: 301 PADFNKVKLLKQV 305

[Close]

BLAST of Carg06306 vs. TrEMBL
Match: tr|A0A1S3AWR1|A0A1S3AWR1_CUCME (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483466 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 6.8e-154
Identity = 271/316 (85.76%), Postives = 291/316 (92.09%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQTLTNQ  PSV PLK+TSKS FA+P  CRFR  S+RALKCSV+ ISE APTELRN
Sbjct: 1   MHLQAQTLTNQLVPSVIPLKATSKSPFAHPNACRFRGVSYRALKCSVATISESAPTELRN 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKPFPAEVSRTIMELSSVGTLSSLS EGWPLGVGVRFAVDQDGTPLLSLNES+ EFSID 
Sbjct: 61  VKPFPAEVSRTIMELSSVGTLSSLSQEGWPLGVGVRFAVDQDGTPLLSLNESLPEFSIDG 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGS+ KPDN+M LKRLHTTWKKRFGED+ EDLLYIV+VER
Sbjct: 121 RSSLHVQLEQCGLRTPQCTIQGSIGKPDNQMVLKRLHTTWKKRFGEDVKEDLLYIVAVER 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGV VNSSDYKTASPDPLRN AE+LV+EINTNNAEDVNRFCNIYADLN +F
Sbjct: 181 VLQIDDFGEVGVWVNSSDYKTASPDPLRNCAEKLVDEINTNNAEDVNRFCNIYADLNLQF 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           TEAKLIW+DRLGFD+R+FSPQ G FE RIPFPREVTDEKGAKSTFNG+SQQAWEVERNF 
Sbjct: 241 TEAKLIWVDRLGFDVRIFSPQNGIFEIRIPFPREVTDEKGAKSTFNGMSQQAWEVERNFV 300

Query: 301 ALDFEKVKQFKMVRPL 317
           A DFE+VKQFKM++ +
Sbjct: 301 APDFERVKQFKMIKTI 316

[Close]

BLAST of Carg06306 vs. TrEMBL
Match: tr|A0A2P4I7B6|A0A2P4I7B6_QUESU (Glutamyl-trna reductase-binding protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_12453 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 4.5e-121
Identity = 216/313 (69.01%), Postives = 260/313 (83.07%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           M LQ Q+L  +FAPS+ P K  SK++F  P    FR+   R  KCS+S +SE    EL  
Sbjct: 1   MLLQTQSLATRFAPSLPPSKPISKTQFTPPIQFPFRQSPSRTTKCSLSLVSEPTHLELSP 60

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
            KPFPAEVSRTIMEL+S+GTLS+L+ EGWPLG+GVRFAVD +GTP+L LN S R+FS+DR
Sbjct: 61  NKPFPAEVSRTIMELASLGTLSTLNQEGWPLGIGVRFAVDPEGTPVLCLNASNRQFSLDR 120

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQ GLRTPQCTIQG+LDKP+++  LK+LH+ WKKRFGE+++EDL+Y+V+VE+
Sbjct: 121 RSSLHVQLEQYGLRTPQCTIQGNLDKPEDRRVLKQLHSLWKKRFGEEVDEDLIYVVAVEQ 180

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQ++DF E GV V S DYK A PDPLR+FAE+LVNEINTNN EDVNRFCNIY DL+F+ 
Sbjct: 181 VLQLEDFKEDGVWVTSLDYKNAYPDPLRDFAEKLVNEINTNNMEDVNRFCNIYVDLDFQV 240

Query: 241 TEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQ 300
           +EAKLIW+DRLGFD+R+FSPQKG FE RIPFPREVTDEKGAKSTFN +SQQAWEVE+NF 
Sbjct: 241 SEAKLIWVDRLGFDMRLFSPQKGVFEVRIPFPREVTDEKGAKSTFNCMSQQAWEVEKNFH 300

Query: 301 ALDFEKVKQFKMV 314
           A DF+KVKQ K +
Sbjct: 301 APDFQKVKQLKQI 313

[Close]

BLAST of Carg06306 vs. TrEMBL
Match: tr|A0A251Q167|A0A251Q167_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G167000 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.3e-117
Identity = 213/314 (67.83%), Postives = 253/314 (80.57%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYP-KGCRFRRFSFRALKCSVSAISELAPTELR 60
           M LQ Q+LT   A    P K   K++F  P K   F +  +R LKCS+S +SE    E +
Sbjct: 1   MLLQTQSLTTHVALPFTPSKPIPKTQFFTPSKQNPFLKTQWRTLKCSLSTVSEPTHLEKK 60

Query: 61  NVKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSID 120
             KPFPAEVSRTIMEL SVGTLS+L+ EGWPLG+GVRFAVD +GTP+L LN S R+FSID
Sbjct: 61  THKPFPAEVSRTIMELVSVGTLSTLTQEGWPLGIGVRFAVDPEGTPVLCLNASNRQFSID 120

Query: 121 RRSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVE 180
           RRSS HVQLEQCGLRTPQCTI GS+DKP+++  LK LH+ W KRFGE++NEDL+Y+VSVE
Sbjct: 121 RRSSFHVQLEQCGLRTPQCTILGSIDKPEDRKMLKYLHSVWTKRFGEEVNEDLIYVVSVE 180

Query: 181 RVLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFE 240
           RVLQ++DF E GV + SSDYK A PDPLR+FAE+LVNEINTNN ED+NRFCNIYADLNF+
Sbjct: 181 RVLQLEDFKEGGVWITSSDYKNAQPDPLRDFAEKLVNEINTNNIEDINRFCNIYADLNFQ 240

Query: 241 FTEAKLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNF 300
            +EAKLIWIDRLGFDLR++SPQ+G FE RIPFPR+V DEKGAKSTFN +SQ AWEVE+NF
Sbjct: 241 VSEAKLIWIDRLGFDLRLWSPQEGIFEVRIPFPRDVIDEKGAKSTFNCMSQLAWEVEKNF 300

Query: 301 QALDFEKVKQFKMV 314
            A DF++VKQ K +
Sbjct: 301 YAPDFDRVKQVKQI 314

[Close]

BLAST of Carg06306 vs. TrEMBL
Match: tr|F6HBU8|F6HBU8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0018g01970 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.9e-116
Identity = 209/310 (67.42%), Postives = 253/310 (81.61%), Query Frame = 0


Query: 4   QAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRNVKP 63
           Q Q+LT    PS+   K T+ + F+ PK   FR+  F+ LKCSVS  SE A  EL   KP
Sbjct: 10  QTQSLTTHLWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPAHLELVRNKP 69

Query: 64  FPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDRRSS 123
           FPAEVSRTIMELSSV TLS+L+ +GWPLGVGVRFAVD  GTP++ LN S   FSIDRRSS
Sbjct: 70  FPAEVSRTIMELSSVATLSALTQDGWPLGVGVRFAVDPQGTPIVCLNASHSHFSIDRRSS 129

Query: 124 LHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVERVLQ 183
           LHVQLEQCGLRTPQCTIQGSLDKP+++M LK+LH+ W++RFG++++E+LL++VSVERVLQ
Sbjct: 130 LHVQLEQCGLRTPQCTIQGSLDKPEDRMALKKLHSIWERRFGKEVDENLLHVVSVERVLQ 189

Query: 184 IDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEFTEA 243
           ++DF EVG  V SSDY+TA+PDPLR+ AE+ V+EINTNN EDVNRFCNIY DL+F+  EA
Sbjct: 190 MEDFQEVGTWVTSSDYRTANPDPLRDSAEKFVDEINTNNMEDVNRFCNIYVDLDFQALEA 249

Query: 244 KLIWIDRLGFDLRVFSPQKGTFEFRIPFPREVTDEKGAKSTFNGLSQQAWEVERNFQALD 303
           KLIW+DRLGFD+R+ SPQK  FE RIPFPREVTDEKGAKS+FN +SQ AWEVE+N+ A D
Sbjct: 250 KLIWVDRLGFDMRISSPQKDVFEVRIPFPREVTDEKGAKSSFNSMSQLAWEVEKNYNAPD 309

Query: 304 FEKVKQFKMV 314
           F+KVKQ K +
Sbjct: 310 FKKVKQLKQI 319

[Close]

BLAST of Carg06306 vs. TrEMBL
Match: tr|A0A0A0L6P9|A0A0A0L6P9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129710 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.2e-115
Identity = 211/249 (84.74%), Postives = 227/249 (91.16%), Query Frame = 0


Query: 1   MHLQAQTLTNQFAPSVAPLKSTSKSRFAYPKGCRFRRFSFRALKCSVSAISELAPTELRN 60
           MHLQAQ LTNQF PS+ PLKSTSKS FA+PKGCRFR  S+RALKCSV+ ISE APTELRN
Sbjct: 87  MHLQAQILTNQFVPSIVPLKSTSKSPFAHPKGCRFREVSYRALKCSVATISESAPTELRN 146

Query: 61  VKPFPAEVSRTIMELSSVGTLSSLSHEGWPLGVGVRFAVDQDGTPLLSLNESMREFSIDR 120
           VKPFPAEVSRTIMELSSVGTLSSLS EGWPLGVGVRFAVDQDGTPLLSLNES+ EFSID 
Sbjct: 147 VKPFPAEVSRTIMELSSVGTLSSLSQEGWPLGVGVRFAVDQDGTPLLSLNESLPEFSIDG 206

Query: 121 RSSLHVQLEQCGLRTPQCTIQGSLDKPDNKMNLKRLHTTWKKRFGEDINEDLLYIVSVER 180
           RSSLHVQLEQCGLRTPQCTIQGS+ KPDNKM LKRLHTTW+KRFGEDINEDLLYIV+VER
Sbjct: 207 RSSLHVQLEQCGLRTPQCTIQGSIGKPDNKMALKRLHTTWRKRFGEDINEDLLYIVAVER 266

Query: 181 VLQIDDFGEVGVLVNSSDYKTASPDPLRNFAERLVNEINTNNAEDVNRFCNIYADLNFEF 240
           VLQIDDFGEVGV VNSSDY TASPDPLRN AE+LV++INTNN+EDVNRFCNIYADLN + 
Sbjct: 267 VLQIDDFGEVGVWVNSSDYITASPDPLRNCAEKLVDDINTNNSEDVNRFCNIYADLNLQP 326

Query: 241 TEAKLIWID 250
           T ++   +D
Sbjct: 327 TNSRRSLLD 335

The following BLAST results are available for this feature:

BLAST of Carg06306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949152.1	4.5e-181	100.00	glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata]	[more]
XP_023540789.1	2.2e-180	99.69	glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita pepo subsp. pe...	[more]
XP_022974735.1	2.4e-179	99.06	glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita maxima]	[more]
XP_022147073.1	2.8e-159	87.50	glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 [Momordica cha...	[more]
XP_022147074.1	9.0e-158	87.50	glutamyl-tRNA reductase-binding protein, chloroplastic isoform X2 [Momordica cha...	[more]

BLAST of Carg06306 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21200.1	2.1e-100	59.74	proton gradient regulation 7	[more]

BLAST of Carg06306 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LU39\|GLUBP_ARATH	3.8e-99	59.74	Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Carg06306 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AWR1\|A0A1S3AWR1_CUCME	6.8e-154	85.76	glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 OS=Cucumis mel...	[more]
tr\|A0A2P4I7B6\|A0A2P4I7B6_QUESU	4.5e-121	69.01	Glutamyl-trna reductase-binding protein, chloroplastic OS=Quercus suber OX=58331...	[more]
tr\|A0A251Q167\|A0A251Q167_PRUPE	2.3e-117	67.83	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G167000 PE=4 SV=1	[more]
tr\|F6HBU8\|F6HBU8_VITVI	1.9e-116	67.42	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0018g01970 PE=4 SV=...	[more]
tr\|A0A0A0L6P9\|A0A0A0L6P9_CUCSA	2.2e-115	84.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129710 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0048037	cofactor binding

Vocabulary: **INTERPRO**
Term	Definition
IPR037119	Haem_oxidase_HugZ-like_sf
IPR012349	Split_barrel_FMN-bd
IPR019595	DUF2470

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0048037	cofactor binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06306-RA	Carg06306-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 316..320
None	No IPR available	PANTHER	PTHR13343:SF14	GLUTAMYL-TRNA REDUCTASE-BINDING PROTEIN, CHLOROPLASTIC	coord: 8..305
None	No IPR available	PANTHER	PTHR13343	CREG1 PROTEIN	coord: 8..305
None	No IPR available	SUPERFAMILY	SSF50475	FMN-binding split barrel	coord: 69..293
IPR019595	Domain of unknown function DUF2470	PFAM	PF10615	DUF2470	coord: 212..283 e-value: 9.1E-9 score: 35.7
IPR012349	FMN-binding split barrel	GENE3D	G3DSA:2.30.110.10		coord: 59..202 e-value: 2.7E-46 score: 159.3
IPR037119	Haem oxygenase HugZ-like superfamily	GENE3D	G3DSA:3.20.180.10		coord: 203..318 e-value: 1.8E-43 score: 149.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06306	Cla021402	Watermelon (97103) v1	carwmB0961
Carg06306	Csa3G129710	Cucumber (Chinese Long) v2	carcuB0975
Carg06306	MELO3C006296	Melon (DHL92) v3.5.1	carmeB0941
Carg06306	ClCG05G003150	Watermelon (Charleston Gray)	carwcgB0935
Carg06306	CSPI03G10660	Wild cucumber (PI 183967)	carcpiB0998
Carg06306	Cucsa.256630	Cucumber (Gy14) v1	carcgyB1077
Carg06306	CmaCh06G012010	Cucurbita maxima (Rimu)	carcmaB1325
Carg06306	CmoCh06G012380	Cucurbita moschata (Rifu)	carcmoB1288
Carg06306	Lsi05G018590	Bottle gourd (USVL1VR-Ls)	carlsiB878
Carg06306	Cp4.1LG08g02590	Cucurbita pepo (Zucchini)	carcpeB1333
Carg06306	CsGy3G010710	Cucumber (Gy14) v2	carcgybB0948
Carg06306	MELO3C006296.2	Melon (DHL92) v3.6.1	carmedB0947
Carg06306	CsaV3_3G010780	Cucumber (Chinese Long) v3	carcucB1003
Carg06306	Cla97C05G083780	Watermelon (97103) v2	carwmbB1008
Carg06306	Bhi01G000146	Wax gourd	carwgoB1118

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06306	Cucurbita pepo (Zucchini)	carcpeB1328
Carg06306	Cucurbita pepo (Zucchini)	carcpeB1330
Carg06306	Cucurbita pepo (Zucchini)	carcpeB1331
Carg06306	Wild cucumber (PI 183967)	carcpiB0996
Carg06306	Bottle gourd (USVL1VR-Ls)	carlsiB876
Carg06306	Melon (DHL92) v3.5.1	carmeB0939
Carg06306	Melon (DHL92) v3.6.1	carmedB0945
Carg06306	Watermelon (Charleston Gray)	carwcgB0936
Carg06306	Watermelon (97103) v1	carwmB0962
Carg06306	Watermelon (97103) v2	carwmbB1009
Carg06306	Wax gourd	carwgoB1114
Carg06306	Silver-seed gourd	carcarB211
Carg06306	Silver-seed gourd	carcarB266
Carg06306	Silver-seed gourd	carcarB649
Carg06306	Cucumber (Gy14) v2	carcgybB0946
Carg06306	Cucumber (Gy14) v1	carcgyB1078
Carg06306	Cucurbita maxima (Rimu)	carcmaB1320
Carg06306	Cucurbita maxima (Rimu)	carcmaB1321
Carg06306	Cucurbita maxima (Rimu)	carcmaB1327
Carg06306	Cucurbita moschata (Rifu)	carcmoB1284
Carg06306	Cucurbita moschata (Rifu)	carcmoB1285
Carg06306	Cucurbita moschata (Rifu)	carcmoB1289