Carg06193 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGATCTCACAGTTCACTCCTCTTCGAGGCCCAGTATCCTTGCTCGAACTCGTTCCCCTCTCCAATTGATGCGGGACCCTCCACCCCTTTCAAAGATCAACCTTCTCGCTGACACACAGCCTAGTGTCCACCCCTTTGAGGCTCAGCCTCTTTGTTGGCACATCGTTTGGTATCTAACCCTGAAACCGTTTATAACGGCTCAAGCCCACCGCTAGCAAATATTATTCTCTTTGGGTCTTTCCTTCCGAACTTCCCTCCAAGATTTTAAAAACACGTCTATTCGGAAGAGGTTTCCACATAAGAATGTTTCGTTCCGGTCTCCAAGCAAGCTTCAATCGAAGTTATTACTGTTTGATAATCTGCAGAGCAGAGCAGACAATGGATGATCTATGGGAAAAGGTATTATTCCCTTGCAAAAGGAAGGAAGGAAAAGGCTCCTGAAACACACACACACAGATCGCTCTCTTTAGCAATCATAACGAGAGTACAGCTTCACCTTCTCATCCTGTAACGCAAATGGTGTCGAAATCGACAGCACAAGACAACCTCGTCCCACAACAATGTCTTTCCACCGTGATTGCTCACAGAAAACTCGTCTGGGTTCAAAATAACCGGAACAAGTTTAATGACTGTAATATACAAGTGAATGTTGCCAAGGCAGAGGCAATCCAGATTGAAGATATCAATTGTAATGTTCAAGAACATGGTTACAAGCCAATGATGGAAAGAGTTGAAAGTTGA ATGTGGGATCTCACAGTTCACTCCTCTTCGAGGCCCAGTATCCTTGCTCGAACTCGTTCCCCTCTCCAATTGATGCGGGACCCTCCACCCCTTTCAAAGATCAACCTTCTCGCTGACACACAGCCTAGTGTCCACCCCTTTGAGGCTCAGCCTCTTTGTTGGCACATCGTTTGGTATCTAACCCTGAAACCAGCAGAGCAGACAATGGATGATCTATGGGAAAAGAGTACAGCTTCACCTTCTCATCCTGTAACGCAAATGGTGTCGAAATCGACAGCACAAGACAACCTCGTCCCACAACAATGTCTTTCCACCGTGATTGCTCACAGAAAACTCGTCTGGGTTCAAAATAACCGGAACAAGTTTAATGACTGTAATATACAAGTGAATGTTGCCAAGGCAGAGGCAATCCAGATTGAAGATATCAATTGTAATGTTCAAGAACATGGTTACAAGCCAATGATGGAAAGAGTTGAAAGTTGA ATGTGGGATCTCACAGTTCACTCCTCTTCGAGGCCCAGTATCCTTGCTCGAACTCGTTCCCCTCTCCAATTGATGCGGGACCCTCCACCCCTTTCAAAGATCAACCTTCTCGCTGACACACAGCCTAGTGTCCACCCCTTTGAGGCTCAGCCTCTTTGTTGGCACATCGTTTGGTATCTAACCCTGAAACCAGCAGAGCAGACAATGGATGATCTATGGGAAAAGAGTACAGCTTCACCTTCTCATCCTGTAACGCAAATGGTGTCGAAATCGACAGCACAAGACAACCTCGTCCCACAACAATGTCTTTCCACCGTGATTGCTCACAGAAAACTCGTCTGGGTTCAAAATAACCGGAACAAGTTTAATGACTGTAATATACAAGTGAATGTTGCCAAGGCAGAGGCAATCCAGATTGAAGATATCAATTGTAATGTTCAAGAACATGGTTACAAGCCAATGATGGAAAGAGTTGAAAGTTGA MWDLTVHSSSRPSILARTRSPLQLMRDPPPLSKINLLADTQPSVHPFEAQPLCWHIVWYLTLKPAEQTMDDLWEKSTASPSHPVTQMVSKSTAQDNLVPQQCLSTVIAHRKLVWVQNNRNKFNDCNIQVNVAKAEAIQIEDINCNVQEHGYKPMMERVES
BLAST of Carg06193 vs. NCBI nr
Match: XP_022924759.1 (E3 ubiquitin protein ligase DRIP2-like [Cucurbita moschata]) HSP 1 Score: 84.3 bits (207), Expect = 4.0e-13 Identity = 52/121 (42.98%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Carg06193 vs. NCBI nr
Match: XP_022980114.1 (E3 ubiquitin protein ligase DRIP2-like [Cucurbita maxima]) HSP 1 Score: 84.0 bits (206), Expect = 5.2e-13 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Carg06193 vs. NCBI nr
Match: XP_016899066.1 (PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Cucumis melo]) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of Carg06193 vs. NCBI nr
Match: XP_016899067.1 (PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Cucumis melo]) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of Carg06193 vs. NCBI nr
Match: XP_022147455.1 (E3 ubiquitin protein ligase DRIP2-like [Momordica charantia]) HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11 Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Carg06193 vs. TrEMBL
Match: tr|A0A1S4DSU5|A0A1S4DSU5_CUCME (E3 ubiquitin protein ligase DRIP2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484181 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.5e-12 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of Carg06193 vs. TrEMBL
Match: tr|A0A1S4DSU7|A0A1S4DSU7_CUCME (E3 ubiquitin protein ligase DRIP2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484181 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.5e-12 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of Carg06193 vs. TrEMBL
Match: tr|A0A0A0L4K2|A0A0A0L4K2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G143560 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.4e-09 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |