Carg06183 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06183
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF506 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_016 : 166200 .. 166893 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGTTAATATTCGGCGAGGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA

mRNA sequence

ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA

Coding sequence (CDS)

ATGGTTGAATACGCAACTATTGATCGTGAATGGATGTGTGTGTGGAACGGAGAAGATTACTTTATAGACACATGCAATTGTCAAGGTTCTGGCGAATTCGAGATTCGATCGTACGTTCACGAGCATCTGGAAACATACTCGTTCGAACTAACGTTGGGCGATTCTCAACAGACCGAGCCTCCTAGTACACTCGTCTCTTCGTACGTCTTCGATAATCGGATGGCGTCTATGAGAACACGACAATATATGTATCCATTGTATCGGAAGCGGCCAGAGGCAGGTTACAGACCAAACCAATCAGGGAAGCAAGAAGGAATGCACTTCCCGCCGTGGAGGAAGGCAGAGTACATGCTCGCGAAATGGCTCTCTTCTCCGATTAGAACCGCCGATTCAGTCACCAACTCTCCTCCAGAGGCCGAACCCGAAGTAATCTTACCTCAAATCCACAACGACCCGCTTGTAACCGACACCGATTGCGGTGAATTCGACGAATCATCTCCGAGCGAATCCGTCACCGGCGATCCCGTATCGCCGTCGTCGACGTCAATCTCCAGCGATAAAAAACTGCCGGCGGGAACTGCTTCCCCGTGGCAACCCCCTGCAGTCAAGCCAAAGAGCATAGATAAAGGAGCTAAGATAGTCACCGGATTAGCTTCCCTTCTCAAAGAGAAATCTTGA

Protein sequence

MVEYATIDREWMCVWNGEDYFIDTCNCQGSGEFEIRSYVHEHLETYSFELTLGDSQQTEPPSTLVSSYVFDNRMASMRTRQYMYPLYRKRPEAGYRPNQSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTDCGEFDESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKIVTGLASLLKEKS

Homology

[Close]

BLAST of Carg06183 vs. NCBI nr
Match: XP_022937081.1 (uncharacterized protein LOC111443488 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 122/132 (92.42%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD
Sbjct: 269 QSLKKKGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 328

Query: 159 CGEF-----DESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKI 218
           CGEF     +ESSPSESVTGDPVSPSSTSISSDKK PAGTASPWQPPAVKPKSIDKGAKI
Sbjct: 329 CGEFELIFGEESSPSESVTGDPVSPSSTSISSDKKPPAGTASPWQPPAVKPKSIDKGAKI 388

Query: 219 VTGLASLLKEKS 226
           VTGLASLLKEKS
Sbjct: 389 VTGLASLLKEKS 400

[Close]

BLAST of Carg06183 vs. NCBI nr
Match: XP_022974410.1 (uncharacterized protein LOC111473084 [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 118/132 (89.39%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPE EPEVILPQIHNDPLVTDTD
Sbjct: 269 QSLKKKGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPETEPEVILPQIHNDPLVTDTD 328

Query: 159 CGEF-----DESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKI 218
           CGEF     +ES+P ESVTGDPVSPSSTSISSDKK PAGTASPWQPPAVKPKSIDKGAKI
Sbjct: 329 CGEFELIFGEESAPRESVTGDPVSPSSTSISSDKKSPAGTASPWQPPAVKPKSIDKGAKI 388

Query: 219 VTGLASLLKEKS 226
           VTGLASLL EKS
Sbjct: 389 VTGLASLLTEKS 400

[Close]

BLAST of Carg06183 vs. NCBI nr
Match: XP_023539817.1 (uncharacterized protein LOC111800384 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56
Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GMHFPPWRKAEYMLAKWLSSPIRTAD VTNSPPEAEPEVILPQIHNDPLVTDTD
Sbjct: 269 QSLKKKGMHFPPWRKAEYMLAKWLSSPIRTADLVTNSPPEAEPEVILPQIHNDPLVTDTD 328

Query: 159 CGEF-----DESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKI 218
           CGEF     +ES+PSES T DP+SPSSTSISSDKK PAGTASPWQPPAVKPKSIDKGAKI
Sbjct: 329 CGEFELIFGEESAPSESFTADPISPSSTSISSDKKPPAGTASPWQPPAVKPKSIDKGAKI 388

Query: 219 VTGLASLLKEKS 226
           VTGLASLLKEKS
Sbjct: 389 VTGLASLLKEKS 400

[Close]

BLAST of Carg06183 vs. NCBI nr
Match: XP_022138190.1 (uncharacterized protein LOC111009423 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 6.6e-38
Identity = 91/136 (66.91%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPE-AEPEVILPQIHNDPLVTDT 158
           QS K++GMHFPPWRKAEY LAKWLS P R  DS T +PPE  +PE I PQIHND LVTDT
Sbjct: 280 QSLKKKGMHFPPWRKAEYALAKWLSPPTRAGDSPTKAPPEQPQPEEIEPQIHNDSLVTDT 339

Query: 159 DCGEF-------DESSPSESVTGDPVS-PSSTSISSDKKLPAGTASPWQPPAVKPKSIDK 218
           DCGEF       +ES+PS +V GDP S           K P GTASPWQPPA+KPKS+DK
Sbjct: 340 DCGEFELIFGEDEESAPSNTVPGDPESXXXXXXXXGQNKRPTGTASPWQPPAIKPKSMDK 399

Query: 219 GAKIVTGLASLLKEKS 226
           GAKIVTGLASLLKEKS
Sbjct: 400 GAKIVTGLASLLKEKS 415

[Close]

BLAST of Carg06183 vs. NCBI nr
Match: XP_022979389.1 (uncharacterized protein LOC111479130 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 6.6e-38
Identity = 92/133 (69.17%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GMHFPPWRKAEYMLAKWLS PIRTADS+ N+PP AEPE    QI NDPL TDTD
Sbjct: 271 QSLKKKGMHFPPWRKAEYMLAKWLSPPIRTADSLPNAPPRAEPEESKSQILNDPLATDTD 330

Query: 159 CGEF-----DESSPSESV-TGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAK 218
           CGEF     +ES   ESV   DP S S T IS + +   G+ SPWQPPA+KPK IDKGAK
Sbjct: 331 CGEFELIFGEESVSIESVIISDPESLSPTLISGENEPATGSDSPWQPPAIKPKRIDKGAK 390

Query: 219 IVTGLASLLKEKS 226
           IVTGLASLLKEKS
Sbjct: 391 IVTGLASLLKEKS 403

[Close]

BLAST of Carg06183 vs. TAIR10
Match: AT4G14620.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09
Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GMHFPPWRKA+YM AKWLSS  R +     +   A   V  P++ +  +     
Sbjct: 238 QSLKKKGMHFPPWRKADYMRAKWLSSYTRNSGEKKPTVTSAAKVVAEPELDSSEI----- 297

Query: 159 CGEFDESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKIVTGLA 218
                E    E V   P+    TS+  D    A             +S+ K AK+VTGLA
Sbjct: 298 -----ELIFEEKVLLPPLKSPITSVGRDDDDVA-------------ESVKKEAKVVTGLA 339

Query: 219 SLLKE 224
            L KE
Sbjct: 358 LLFKE 339

[Close]

BLAST of Carg06183 vs. TAIR10
Match: AT2G38820.2 (Protein of unknown function (DUF506) )

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-06
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQI 149
           QS K++G+H PPWR+AEY+ +KWLSS +R   +      +   EVI   +
Sbjct: 254 QSLKKKGLHVPPWRRAEYVKSKWLSSHVRVDQNSNGEVKQESVEVIAESV 303

[Close]

BLAST of Carg06183 vs. TAIR10
Match: AT3G22970.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 48.5 bits (114), Expect = 6.2e-06
Identity = 43/126 (34.13%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDTD 158
           QS K++GM FPPWRKAEYM +KWLSS  R +  V                  D  VT TD
Sbjct: 263 QSLKKKGMPFPPWRKAEYMRSKWLSSYTRASVVVV-----------------DETVTVTD 322

Query: 159 CGEFDESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKIVTGLA 218
               D +   E  + +          S + +   ++SP         ++++  K VTGLA
Sbjct: 323 VTAADAAVEKEVDSVEIELVFEEKCLSPRVIVNSSSSP--TDGDDDVAVEREVKAVTGLA 369

Query: 219 SLLKEK 225
           SL KEK
Sbjct: 383 SLFKEK 369

[Close]

BLAST of Carg06183 vs. TrEMBL
Match: tr|A0A0A0L8I2|A0A0A0L8I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144170 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.1e-36
Identity = 89/136 (65.44%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEP-EVILPQIHNDPLVTDT 158
           QS K++GMHFPPWRKAEYMLAKWLS+P RTADS++N+ P+ EP E   P I NDPLVT T
Sbjct: 277 QSLKKKGMHFPPWRKAEYMLAKWLSTPTRTADSISNASPKTEPDETKSPIIENDPLVTYT 336

Query: 159 DCGEF-----DESSPSE---SVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDK 218
           DCGEF     +ESS      S++GD  SP     + + K PAG+A PWQPPA+KPKSIDK
Sbjct: 337 DCGEFELIFGEESSTKSTNLSISGDTESP-----AGENKPPAGSAPPWQPPAIKPKSIDK 396

Query: 219 GAKIVTGLASLLKEKS 226
           GAKIVTGLASLLKEKS
Sbjct: 397 GAKIVTGLASLLKEKS 407

[Close]

BLAST of Carg06183 vs. TrEMBL
Match: tr|A0A1S3AXG0|A0A1S3AXG0_CUCME (uncharacterized protein LOC103483661 OS=Cucumis melo OX=3656 GN=LOC103483661 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.2e-33
Identity = 85/136 (62.50%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEP-EVILPQIHNDPLVTDT 158
           QS K++GMHFPPWRKAEYMLAKWLS+P RTADS++N+ P+ EP E   P   +DPLVT T
Sbjct: 276 QSLKKKGMHFPPWRKAEYMLAKWLSTPTRTADSLSNASPKTEPDETKSPITPSDPLVTYT 335

Query: 159 DCGEFD--------ESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDK 218
           DCGEF+          SP+ S +GD  SP      S+ KL A +A  WQPPA+KPKSIDK
Sbjct: 336 DCGEFELIFGEESTPKSPNLSTSGDSESP-----PSENKLLAASAPAWQPPAIKPKSIDK 395

Query: 219 GAKIVTGLASLLKEKS 226
           GAKIVTGLASLLKEKS
Sbjct: 396 GAKIVTGLASLLKEKS 406

[Close]

BLAST of Carg06183 vs. TrEMBL
Match: tr|A0A2C9UCF3|A0A2C9UCF3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G034600 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.7e-22
Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 98  NQSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVTDT 157
           NQS K++GMHFPPWR+AEYM AKWLS   R  D+++N+ P++  +  L       + T++
Sbjct: 268 NQSLKKKGMHFPPWRRAEYMRAKWLSPFTRQNDAISNTKPKSGKDECL-------VATES 327

Query: 158 --DCGEFDESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKIVT 217
             DCGE +     ++   D VS S + IS D+K   G  + WQPPAVKPKS+D+GAK+VT
Sbjct: 328 IDDCGELELIFGEKTAPRDTVSSSPSIISGDEKEKVGLGT-WQPPAVKPKSVDRGAKMVT 387

Query: 218 GLASLLKEK 225
           GLASLLKEK
Sbjct: 388 GLASLLKEK 388

[Close]

BLAST of Carg06183 vs. TrEMBL
Match: tr|A0A2R6PKC2|A0A2R6PKC2_ACTCH (2-isopropylmalate synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc27373 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-20
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILP-QIHNDPLVTDT 158
           QS K++GMH PPWRKAEYM AKWLS   RT  + T  P +A P+VI P         ++T
Sbjct: 265 QSLKKKGMHIPPWRKAEYMRAKWLSPHART--TTTAPPNDAVPDVIPPSDTKACSAPSET 324

Query: 159 DCGEFD----ESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKI 218
           DCG+F+    E + SES   D  + S   IS + K     ASPW+PPA+K KS ++GAK+
Sbjct: 325 DCGDFELIFGEKTSSESDLADIETSSPEMISGEDKKSPEVASPWKPPAMKSKSCERGAKV 384

Query: 219 VTGLASLLKEK 225
           VTGLASLL+EK
Sbjct: 385 VTGLASLLREK 393

[Close]

BLAST of Carg06183 vs. TrEMBL
Match: tr|A0A2R6RUX9|A0A2R6RUX9_ACTCH (Toll-like receptor 7 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04222 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-20
Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 99  QSGKQEGMHFPPWRKAEYMLAKWLSSPIRTADSVTNSPPEAEPEVILPQIHNDPLVT-DT 158
           QS K++GMH PPWRKAEYM AKWLS   RT  S    P +A PE   P  +N  L T +T
Sbjct: 266 QSLKKKGMHIPPWRKAEYMRAKWLSPHARTTGSA--PPNDAVPETHPPADNNPCLATSET 325

Query: 159 DCGEFD----ESSPSESVTGDPVSPSSTSISSDKKLPAGTASPWQPPAVKPKSIDKGAKI 218
           DCG+F+    E + S S   +  SP   S   DKK PA   SPW+PPA+K KS ++GA++
Sbjct: 326 DCGDFELIFGEKTSSASSEIETSSPEIIS-GEDKKSPA-VVSPWKPPAIKLKSCERGARV 385

Query: 219 VTGLASLLKEK 225
           VTGLASLL+EK
Sbjct: 386 VTGLASLLREK 392

The following BLAST results are available for this feature:

BLAST of Carg06183 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937081.1	1.2e-58	92.42	uncharacterized protein LOC111443488 [Cucurbita moschata]	[more]
XP_022974410.1	1.1e-56	89.39	uncharacterized protein LOC111473084 [Cucurbita maxima]	[more]
XP_023539817.1	3.1e-56	88.64	uncharacterized protein LOC111800384 [Cucurbita pepo subsp. pepo]	[more]
XP_022138190.1	6.6e-38	66.91	uncharacterized protein LOC111009423 [Momordica charantia]	[more]
XP_022979389.1	6.6e-38	69.17	uncharacterized protein LOC111479130 [Cucurbita maxima]	[more]

BLAST of Carg06183 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14620.1	4.6e-09	36.00	Protein of unknown function (DUF506)	[more]
AT2G38820.2	3.6e-06	42.00	Protein of unknown function (DUF506)	[more]
AT3G22970.1	6.2e-06	34.13	Protein of unknown function (DUF506)	[more]

BLAST of Carg06183 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg06183 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8I2\|A0A0A0L8I2_CUCSA	4.1e-36	65.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144170 PE=4 SV=1	[more]
tr\|A0A1S3AXG0\|A0A1S3AXG0_CUCME	3.2e-33	62.50	uncharacterized protein LOC103483661 OS=Cucumis melo OX=3656 GN=LOC103483661 PE=...	[more]
tr\|A0A2C9UCF3\|A0A2C9UCF3_MANES	5.7e-22	50.39	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G034600 PE=4 SV=...	[more]
tr\|A0A2R6PKC2\|A0A2R6PKC2_ACTCH	1.8e-20	50.38	2-isopropylmalate synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=C...	[more]
tr\|A0A2R6RUX9\|A0A2R6RUX9_ACTCH	7.0e-20	51.91	Toll-like receptor 7 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_A...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006502	PDDEXK-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06183-RA	Carg06183-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006502	Protein of unknown function PDDEXK-like	PFAM	PF04720	PDDEXK_6	coord: 99..125 e-value: 6.1E-9 score: 36.0
IPR006502	Protein of unknown function PDDEXK-like	PANTHER	PTHR31579	FAMILY NOT NAMED	coord: 99..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..209
None	No IPR available	PANTHER	PTHR31579:SF19	SUBFAMILY NOT NAMED	coord: 99..222

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06183	Silver-seed gourd	carcarB136
Carg06183	Silver-seed gourd	carcarB274
Carg06183	Silver-seed gourd	carcarB266
Carg06183	Silver-seed gourd	carcarB349
Carg06183	Cucumber (Gy14) v1	carcgyB1077
Carg06183	Silver-seed gourd	carcarB610
Carg06183	Cucumber (Gy14) v2	carcgybB0945
Carg06183	Cucumber (Gy14) v2	carcgybB0948
Carg06183	Cucumber (Gy14) v1	carcgyB1081
Carg06183	Cucurbita maxima (Rimu)	carcmaB1320
Carg06183	Cucurbita maxima (Rimu)	carcmaB1321
Carg06183	Cucurbita maxima (Rimu)	carcmaB1325
Carg06183	Cucurbita maxima (Rimu)	carcmaB1327
Carg06183	Cucurbita maxima (Rimu)	carcmaB1328
Carg06183	Cucurbita moschata (Rifu)	carcmoB1284
Carg06183	Cucurbita moschata (Rifu)	carcmoB1285
Carg06183	Cucurbita moschata (Rifu)	carcmoB1288
Carg06183	Cucurbita moschata (Rifu)	carcmoB1289
Carg06183	Cucurbita moschata (Rifu)	carcmoB1290
Carg06183	Cucurbita pepo (Zucchini)	carcpeB1328
Carg06183	Cucurbita pepo (Zucchini)	carcpeB1330
Carg06183	Cucurbita pepo (Zucchini)	carcpeB1331
Carg06183	Cucurbita pepo (Zucchini)	carcpeB1333
Carg06183	Wild cucumber (PI 183967)	carcpiB0998
Carg06183	Wild cucumber (PI 183967)	carcpiB0995
Carg06183	Cucumber (Chinese Long) v2	carcuB0974
Carg06183	Cucumber (Chinese Long) v2	carcuB0975
Carg06183	Cucumber (Chinese Long) v3	carcucB1001
Carg06183	Cucumber (Chinese Long) v3	carcucB1003
Carg06183	Bottle gourd (USVL1VR-Ls)	carlsiB876
Carg06183	Bottle gourd (USVL1VR-Ls)	carlsiB877
Carg06183	Bottle gourd (USVL1VR-Ls)	carlsiB878
Carg06183	Melon (DHL92) v3.5.1	carmeB0940
Carg06183	Melon (DHL92) v3.5.1	carmeB0941
Carg06183	Melon (DHL92) v3.6.1	carmedB0947
Carg06183	Watermelon (Charleston Gray)	carwcgB0934
Carg06183	Watermelon (Charleston Gray)	carwcgB0935
Carg06183	Watermelon (Charleston Gray)	carwcgB0936
Carg06183	Watermelon (97103) v1	carwmB0962
Carg06183	Watermelon (97103) v1	carwmB0959
Carg06183	Watermelon (97103) v1	carwmB0961
Carg06183	Watermelon (97103) v2	carwmbB1008
Carg06183	Watermelon (97103) v2	carwmbB1009
Carg06183	Watermelon (97103) v2	carwmbB1013
Carg06183	Wax gourd	carwgoB1114
Carg06183	Wax gourd	carwgoB1119