Carg06163 (gene) Silver-seed gourd

Overview
NameCarg06163
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description40S ribosomal protein S3a
LocationCucurbita_argyrosperma_scaffold_016 : 54387 .. 56669 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTAAAATTAACAGATAAATTATTGAAAATAAAAAATATAAAAGACCAAAAACCTGACCTATATAAACGCAGATTTTAGGGTACTGGAGCCTCTCAAACTCTCTCTGCCGTGCAGCATAACATCCGCAGAGTTAGGGCAACTCTCCTCCTCCACCCATGGCCGTCGGGTACCTTTTCTTTCTTTCCGATTGTTTCAATTGTATGCTGCATTGTGTTTTTATCTCTCATACTTGTTTTCTTTTCAATCAGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCGTGAGTATATATATTTATTTTTATATTCCTTTGTTTTTCAGATCTTAGTGTTGGTTTTGGAGTACTTTATATATCTGTTGTATGCTCGTCCTCCAGCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAAGCACCTTCAGTTTTCACTGTTAAGAATGTTGGAAAGACTCTTGTTACGCGTACGCAGGGTACTAAGGTAAATCGATCCTTTTCTGCTTGCTTTTACGTTTATATTTGAATTTTATCTGGAAAAAGGGGGTATAGTGTAAGAGAATTTCAATGGTGTTTGTGTGGTCTTAGAGGCATTGTTTTTTAAATGGGTTTTGGTGTCATTGTTGAATTCGATTGATGCAAGATTTTTCTTTTTCTCCTTGTTTATAATTTTGTATTGATGCTGGATGGAGATATTTGGATTCTTAGAACAAAAGATTGGATTTTATGTTTTCTAGATGTTGTGGAATGCCGTTTGTAACCTGGCTTACTTCTTTGGAGTTTTGGAAGTTATCTGATGTAGATTTAAGACCTATAAAATGGAACCGATGACCATTGCATTACAAAAGCGATTCTTTAATCTTTGGGTTAAGCGTGATCACATAACAAAAATGTCACGAGTAGTAGTTTACTTAATTACTGGGATCTTAGCTATTCCTAATTCATATGAATATAAAATCTAATTTAGTTTCAAATAAATATTGAATATTGGAAAATATCAATTATAGAACATAATAATTAATATAAAAAAGTAATAGAATATGGCTATGAAACACTTTCTTCTATTTATCAAATGGTTGTATCAATAGTTAATTTTGCAAATAATGTAAATATTAAATTTCCTTGGCTTCTCCCAATAGATTGCTTCTGAAGGACTCAAACACAGAGTCTTCGAGGTCTCTTTGGCTGATCTTCAGGATGATGAGGAGCACGCTTACAGGAAGATTCGACTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTAACAAATTTCTGGGTGCGATAGGACATTCCACTTAGTTGTATTCACATGGTATTTTGTTGATTGCGTTTTGATCTTATTTCTTTCTTGTGAAAATGTTCAGGGAATGAATTTCACTACTGACAAGTTAAGGTCTTTAGTACGCAAATGGCACACTTTGATTGAAGCTCATGTTGATGTCAAAACCACTGACAACTACACTCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAAGTGAAAAGGACATGCTACGCCCAATCCAGCCAGATCAGGCAGGTTAGTTCAGGACTGGAGTGAAGTATTTTTATCGTAAAACTTGTCTTTTGCTTATGGTAATTCATTTGTCACTAAATTTTCTCTGAATTGATGCCGACATCCTTTTTACATGTCAGATCCGTCGTAAGATGAGAGAGATCATGGTAAACCAAGCAACCTCTTGTGATTTGAAGGAACTGGTTCGCAAGTTCATTCCAGAGTTCATCGGCAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTAAAAATTTTGAAAGCACCTAAATTCGACCTTGGAAAGTTGATGGAGGTATATATATGGTTTATTCTCATTCTCTCTTAATGTTTTGAACTTGATCCGTAGCCTATGAAATTATAATATTATTTCAGAGTCTTATCACTGCCATGATCTGTGTTTATAGGTTCATGGAGACTACTCAGAAGACGTTGGCGTGAAGGTCGAGAGACCTGCTGATGAAGCTGCAGATGAGGGGCCAACCGAAATTGTTGGAGCTTAAGTTCAGTTATGTTGAATTTCATTTGATCTGTTTTTGTTTAGTTTTGCCCCGCTTTGTCACAAACTTAGTTTTAACCCACTTCTCGATCTAGTCAGAGAGTTGGTTTTGAGGATCGCAATTTTGTGCTACCAAATCCTTAGTTAAGATTACTTTCATTGAATCAATTTAGCAAATTGCACCGTTTTTTTCAC

mRNA sequence

AAGTAAAATTAACAGATAAATTATTGAAAATAAAAAATATAAAAGACCAAAAACCTGACCTATATAAACGCAGATTTTAGGGTACTGGAGCCTCTCAAACTCTCTCTGCCGTGCAGCATAACATCCGCAGAGTTAGGGCAACTCTCCTCCTCCACCCATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAAGCACCTTCAGTTTTCACTGTTAAGAATGTTGGAAAGACTCTTGTTACGCGTACGCAGGGTACTAAGATTGCTTCTGAAGGACTCAAACACAGAGTCTTCGAGGTCTCTTTGGCTGATCTTCAGGATGATGAGGAGCACGCTTACAGGAAGATTCGACTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTAACAAATTTCTGGGGAATGAATTTCACTACTGACAAGTTAAGGTCTTTAGTACGCAAATGGCACACTTTGATTGAAGCTCATGTTGATGTCAAAACCACTGACAACTACACTCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAAGTGAAAAGGACATGCTACGCCCAATCCAGCCAGATCAGGCAGATCCGTCGTAAGATGAGAGAGATCATGGTAAACCAAGCAACCTCTTGTGATTTGAAGGAACTGGTTCGCAAGTTCATTCCAGAGTTCATCGGCAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTAAAAATTTTGAAAGCACCTAAATTCGACCTTGGAAAGTTGATGGAGGTTCATGGAGACTACTCAGAAGACGTTGGCGTGAAGGTCGAGAGACCTGCTGATGAAGCTGCAGATGAGGGGCCAACCGAAATTGTTGGAGCTTAAGTTCAGTTATGTTGAATTTCATTTGATCTGTTTTTGTTTAGTTTTGCCCCGCTTTGTCACAAACTTAGTTTTAACCCACTTCTCGATCTAGTCAGAGAGTTGGTTTTGAGGATCGCAATTTTGTGCTACCAAATCCTTAGTTAAGATTACTTTCATTGAATCAATTTAGCAAATTGCACCGTTTTTTTCAC

Coding sequence (CDS)

ATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAAGCACCTTCAGTTTTCACTGTTAAGAATGTTGGAAAGACTCTTGTTACGCGTACGCAGGGTACTAAGATTGCTTCTGAAGGACTCAAACACAGAGTCTTCGAGGTCTCTTTGGCTGATCTTCAGGATGATGAGGAGCACGCTTACAGGAAGATTCGACTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTAACAAATTTCTGGGGAATGAATTTCACTACTGACAAGTTAAGGTCTTTAGTACGCAAATGGCACACTTTGATTGAAGCTCATGTTGATGTCAAAACCACTGACAACTACACTCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAAGTGAAAAGGACATGCTACGCCCAATCCAGCCAGATCAGGCAGATCCGTCGTAAGATGAGAGAGATCATGGTAAACCAAGCAACCTCTTGTGATTTGAAGGAACTGGTTCGCAAGTTCATTCCAGAGTTCATCGGCAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTAAAAATTTTGAAAGCACCTAAATTCGACCTTGGAAAGTTGATGGAGGTTCATGGAGACTACTCAGAAGACGTTGGCGTGAAGGTCGAGAGACCTGCTGATGAAGCTGCAGATGAGGGGCCAACCGAAATTGTTGGAGCTTAA

Protein sequence

MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAADEGPTEIVGA
Homology
[Close]
BLAST of Carg06163 vs. NCBI nr
Match: XP_022948251.1 (40S ribosomal protein S3a [Cucurbita moschata])

HSP 1 Score: 516.5 bits (1329), Expect = 5.1e-143
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAADEGPTEIVGA
Sbjct: 241 VKVERPADEAADEGPTEIVGA 261

[Close]
BLAST of Carg06163 vs. NCBI nr
Match: XP_022974423.1 (40S ribosomal protein S3a isoform X1 [Cucurbita maxima] >XP_022974424.1 40S ribosomal protein S3a isoform X2 [Cucurbita maxima] >XP_023539944.1 40S ribosomal protein S3a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.5 bits (1321), Expect = 4.3e-142
Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAADEGPTEIVGA
Sbjct: 241 VKVERPADEAADEGPTEIVGA 261

[Close]
BLAST of Carg06163 vs. NCBI nr
Match: XP_008438626.1 (PREDICTED: 40S ribosomal protein S3a [Cucumis melo])

HSP 1 Score: 503.1 bits (1294), Expect = 5.9e-139
Identity = 254/261 (97.32%), Postives = 258/261 (98.85%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAA EG TE+VGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]
BLAST of Carg06163 vs. NCBI nr
Match: XP_022979234.1 (40S ribosomal protein S3a-like [Cucurbita maxima])

HSP 1 Score: 502.3 bits (1292), Expect = 1.0e-138
Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAA E  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]
BLAST of Carg06163 vs. NCBI nr
Match: XP_023527182.1 (40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.9 bits (1291), Expect = 1.3e-138
Identity = 255/261 (97.70%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAA E  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]
BLAST of Carg06163 vs. TAIR10
Match: AT3G04840.1 (Ribosomal protein S3Ae)

HSP 1 Score: 447.6 bits (1150), Expect = 5.3e-126
Identity = 225/262 (85.88%), Postives = 245/262 (93.51%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 240
           LK+LV KFIPE IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240

Query: 241 GVKVERPADEAADEGPTEIVGA 262
           GVKV+RPADE A E PTEI+GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262

[Close]
BLAST of Carg06163 vs. TAIR10
Match: AT4G34670.1 (Ribosomal protein S3Ae)

HSP 1 Score: 446.4 bits (1147), Expect = 1.2e-125
Identity = 226/262 (86.26%), Postives = 242/262 (92.37%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 240
           LKELV KFIPE IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240

Query: 241 GVKVERPADEAADEGPTEIVGA 262
           GVKV+RPADE   E PTEI+GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262

[Close]
BLAST of Carg06163 vs. Swiss-Prot
Match: sp|Q8GTE3|RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 3.1e-131
Identity = 238/261 (91.19%), Postives = 248/261 (95.02%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
            KVE PADE   EG  EIVGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261

[Close]
BLAST of Carg06163 vs. Swiss-Prot
Match: sp|A5B4K1|RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.4e-129
Identity = 231/261 (88.51%), Postives = 245/261 (93.87%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPE IG+EIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
            K+ERPADE   EG TE++GA
Sbjct: 241 TKLERPADEPVAEGVTEVIGA 261

[Close]
BLAST of Carg06163 vs. Swiss-Prot
Match: sp|P49198|RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2)

HSP 1 Score: 455.3 bits (1170), Expect = 4.6e-127
Identity = 227/261 (86.97%), Postives = 249/261 (95.40%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +L
Sbjct: 61  LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPE IG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VK++RPA+EAA E  TE++GA
Sbjct: 241 VKLDRPAEEAAPEA-TEVIGA 260

[Close]
BLAST of Carg06163 vs. Swiss-Prot
Match: sp|P33444|RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4)

HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-126
Identity = 227/262 (86.64%), Postives = 250/262 (95.42%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           L+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +L
Sbjct: 61  LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DV 240
           LK+LV+KFIPE IG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDI 240

Query: 241 GVKVERPADEAADEGPTEIVGA 262
           G K++RPA+EA  E PTE++GA
Sbjct: 241 GTKLDRPAEEAVAE-PTEVIGA 261

[Close]
BLAST of Carg06163 vs. Swiss-Prot
Match: sp|Q9MBB3|RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota OX=4039 GN=cyc07 PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-125
Identity = 229/261 (87.74%), Postives = 244/261 (93.49%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAP+VF  KNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEV LADLQ DE+ AYRKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKM EIM NQA+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV KFIPE IG+EIEKATSSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VK+ERP +E   EG TE+VGA
Sbjct: 241 VKLERPIEETMVEGETEVVGA 261

[Close]
BLAST of Carg06163 vs. TrEMBL
Match: tr|A0A1S3AXI4|A0A1S3AXI4_CUCME (40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.9e-139
Identity = 254/261 (97.32%), Postives = 258/261 (98.85%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADEAA EG TE+VGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]
BLAST of Carg06163 vs. TrEMBL
Match: tr|A0A0A0L4P6|A0A0A0L4P6_CUCSA (40S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_3G146360 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-138
Identity = 253/261 (96.93%), Postives = 257/261 (98.47%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKVERPADE A EG TE+VGA
Sbjct: 241 VKVERPADETAVEGATEVVGA 261

[Close]
BLAST of Carg06163 vs. TrEMBL
Match: tr|A0A1S3BMP7|A0A1S3BMP7_CUCME (40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103491239 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.1e-136
Identity = 251/261 (96.17%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKV+RPA+EA  EG TEIVGA
Sbjct: 241 VKVDRPAEEAV-EGATEIVGA 260

[Close]
BLAST of Carg06163 vs. TrEMBL
Match: tr|A0A0A0LLN9|A0A0A0LLN9_CUCSA (40S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_2G223140 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 4.0e-136
Identity = 250/261 (95.79%), Postives = 255/261 (97.70%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VKV+RPA+EA  EG TE+VGA
Sbjct: 241 VKVDRPAEEAV-EGATEVVGA 260

[Close]
BLAST of Carg06163 vs. TrEMBL
Match: tr|A0A059B376|A0A059B376_EUCGR (40S ribosomal protein S3a OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03423 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.9e-134
Identity = 243/261 (93.10%), Postives = 251/261 (96.17%), Query Frame = 0 

Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVFTVKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFTVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE SLADLQ DE+H+YRKIRLR EDVQGRNVLTNFWGMNFTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFETSLADLQGDEDHSYRKIRLRCEDVQGRNVLTNFWGMNFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED+G
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIG 240

Query: 241 VKVERPADEAADEGPTEIVGA 262
           VK++RPADE   E PTE++GA
Sbjct: 241 VKLDRPADETVAEAPTEVIGA 261

The following BLAST results are available for this feature:
BLAST of Carg06163 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948251.15.1e-143100.0040S ribosomal protein S3a [Cucurbita moschata][more]
XP_022974423.14.3e-14299.6240S ribosomal protein S3a isoform X1 [Cucurbita maxima] >XP_022974424.1 40S ribo... [more]
XP_008438626.15.9e-13997.32PREDICTED: 40S ribosomal protein S3a [Cucumis melo][more]
XP_022979234.11.0e-13897.7040S ribosomal protein S3a-like [Cucurbita maxima][more]
XP_023527182.11.3e-13897.7040S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg06163 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04840.15.3e-12685.88Ribosomal protein S3Ae[more]
AT4G34670.11.2e-12586.26Ribosomal protein S3Ae[more]
BLAST of Carg06163 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GTE3|RS3A_CICAR3.1e-13191.1940S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
sp|A5B4K1|RS3A1_VITVI6.4e-12988.5140S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3... [more]
sp|P49198|RS3A_HELAN4.6e-12786.9740S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2[more]
sp|P33444|RS3A_CATRO1.3e-12686.6440S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4[more]
sp|Q9MBB3|RS3A_DAUCA1.1e-12587.7440S ribosomal protein S3a OS=Daucus carota OX=4039 GN=cyc07 PE=2 SV=1[more]
BLAST of Carg06163 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXI4|A0A1S3AXI4_CUCME3.9e-13997.3240S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1[more]
tr|A0A0A0L4P6|A0A0A0L4P6_CUCSA1.1e-13896.9340S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_3G146360 PE=3 SV=1[more]
tr|A0A1S3BMP7|A0A1S3BMP7_CUCME3.1e-13696.1740S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103491239 PE=3 SV=1[more]
tr|A0A0A0LLN9|A0A0A0LLN9_CUCSA4.0e-13695.7940S ribosomal protein S3a OS=Cucumis sativus OX=3659 GN=Csa_2G223140 PE=3 SV=1[more]
tr|A0A059B376|A0A059B376_EUCGR2.9e-13493.1040S ribosomal protein S3a OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03423 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR027500Ribosomal_S1/3_euk
IPR018281Ribosomal_S3Ae_CS
IPR001593Ribosomal_S3Ae
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06163-RACarg06163-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 15..221
e-value: 5.4E-139
score: 477.7
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 15..221
e-value: 1.4E-98
score: 328.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR11830:SF14SUBFAMILY NOT NAMEDcoord: 3..261
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 3..261
IPR018281Ribosomal protein S3Ae, conserved sitePROSITEPS01191RIBOSOMAL_S3AEcoord: 61..73
IPR02750040S ribosomal protein S1/3, eukaryotesHAMAPMF_03122Ribosomal_S3Ae_eukcoord: 1..258
score: 40.598

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06163Cla021599Watermelon (97103) v1carwmB0961
Carg06163Csa2G223140Cucumber (Chinese Long) v2carcuB0974
Carg06163Csa3G146360Cucumber (Chinese Long) v2carcuB0975
Carg06163MELO3C006507Melon (DHL92) v3.5.1carmeB0941
Carg06163MELO3C014292Melon (DHL92) v3.5.1carmeB0940
Carg06163ClCG06G006390Watermelon (Charleston Gray)carwcgB0936
Carg06163ClCG05G004930Watermelon (Charleston Gray)carwcgB0935
Carg06163CSPI03G12850Wild cucumber (PI 183967)carcpiB0998
Carg06163CSPI02G11070Wild cucumber (PI 183967)carcpiB0995
Carg06163Cucsa.254560Cucumber (Gy14) v1carcgyB1077
Carg06163CmaCh06G013790Cucurbita maxima (Rimu)carcmaB1325
Carg06163CmaCh08G011320Cucurbita maxima (Rimu)carcmaB1327
Carg06163CmaCh14G017380Cucurbita maxima (Rimu)carcmaB1320
Carg06163CmaCh17G002180Cucurbita maxima (Rimu)carcmaB1321
Carg06163CmoCh14G017770Cucurbita moschata (Rifu)carcmoB1284
Carg06163CmoCh08G011060Cucurbita moschata (Rifu)carcmoB1289
Carg06163CmoCh06G013910Cucurbita moschata (Rifu)carcmoB1288
Carg06163CmoCh17G002090Cucurbita moschata (Rifu)carcmoB1285
Carg06163Lsi09G013000Bottle gourd (USVL1VR-Ls)carlsiB876
Carg06163Lsi05G016300Bottle gourd (USVL1VR-Ls)carlsiB878
Carg06163Cp4.1LG03g10390Cucurbita pepo (Zucchini)carcpeB1331
Carg06163Cp4.1LG12g01740Cucurbita pepo (Zucchini)carcpeB1328
Carg06163Cp4.1LG17g01530Cucurbita pepo (Zucchini)carcpeB1330
Carg06163Cp4.1LG08g04010Cucurbita pepo (Zucchini)carcpeB1333
Carg06163CsGy2G011090Cucumber (Gy14) v2carcgybB0945
Carg06163CsGy3G013000Cucumber (Gy14) v2carcgybB0948
Carg06163MELO3C006507.2Melon (DHL92) v3.6.1carmedB0947
Carg06163MELO3C014292.2Melon (DHL92) v3.6.1carmedB0946
Carg06163CsaV3_3G012980Cucumber (Chinese Long) v3carcucB1003
Carg06163CsaV3_2G013510Cucumber (Chinese Long) v3carcucB1001
Carg06163Cla97C05G086030Watermelon (97103) v2carwmbB1008
Carg06163Cla97C06G115920Watermelon (97103) v2carwmbB1009
Carg06163Bhi12G001499Wax gourdcarwgoB1114
Carg06163Bhi01G000559Wax gourdcarwgoB1119
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06163Carg10037Silver-seed gourdcarcarB266
Carg06163Carg15891Silver-seed gourdcarcarB349
Carg06163Carg23496Silver-seed gourdcarcarB630
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06163Silver-seed gourdcarcarB136
Carg06163Silver-seed gourdcarcarB610
Carg06163Cucurbita maxima (Rimu)carcmaB1328
Carg06163Cucurbita moschata (Rifu)carcmoB1290
Carg06163Bottle gourd (USVL1VR-Ls)carlsiB877
Carg06163Watermelon (Charleston Gray)carwcgB0934
Carg06163Watermelon (97103) v1carwmB0962
Carg06163Watermelon (97103) v1carwmB0959
Carg06163Watermelon (97103) v2carwmbB1012
Carg06163Watermelon (97103) v2carwmbB1013
Carg06163Wax gourdcarwgoB1124