Carg06144 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06144
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box/kelch-repeat protein
Location	Cucurbita_argyrosperma_scaffold_026 : 1329525 .. 1330868 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAATGGCGTCGGACAACAACTCCGGCTCAAACTCTCGCCATTTCTCCTGGTTCATCAAATCTTGCTTCCCTAACCCTAACGATTCCTCCGCCACCGTCCCTGTTCACTCCAAATCTTGCTTCGAAACTACTAATATCGCCTCCAATCACCTCCCCCCACCTCCTGCCGCCGTCTCCTCCCTTCCCGACGACCTTCTTTTGGAGTGCCTTTCCAGAGTTCCGTCCGCATCTCTTCCTTCCGTTTCTCTCGTTTGCCGTCAGTGGTCTCGCCTTCTGCTTTCCTCTTCGTTTGTCGATCTTCGCCGTCTTCGCGGTCATTTGGAGGATACTGTTTATGCTGTTTCTGCAACTAATTACGGCCTATTTGCAGCGAGTTTCAACTTCCGAGACGGCGGATTGTGGAAGGTTGCGCTGTTCAGAGCCAAGGAGAGTTTGTTTCTTAGTAATTTCTATGGATTGCTCTCTCACGCGCGCCTCTCTGCCATTGGACCTAGGATTTACCTAATCGGCCGAAATGCGATGTTCCTTTACGATACCTGGTCTGGAATGGTCACCGCCAGATCTGCGATGAATTTCTCCAGGAAGAAATTCGCCAATGCGGTGATTTCCGGTAGAATCTACGTCGCTGGCGGTGCTGCGACCACGACGGCGGTGGAGATGTATGATCCAGAGACGGACTCTTGGCAAGTCGTTGCTCAGTCAACGAGAAGACGCTACGGTTGTATCGGAGCCGCCGTGGACGGCGTGTTCTACGTGATTGGAGGATTGAAGATCGGGGGAGGAGTTTCAGGTAACCTAACATCACGCGCCGCTGGTGGATCGGAGGCTCATATCTACGCGAGCTCCATGGATATGTACGATGTGGAGGCGCGTACGTGGTTGAGAAGCCGCGCCGTACCCGGAGGAGGCTGCGTGGTGGCGGCGTGTGCGGCGGCGGGACATATCTTCGTTCTCGCTAGCCACGCCGTCGAGCTCTCGTTCTGGAAATTCGACGCAAGAAGAAAGTGCCCTAACAACACCAATAGACACACCACCACCCAAACCTCAACCAAAACCGCCGGATTCGGCGAGTGGTACAGAATAAAAAGTCCGCCGCTCCCGCCGCAGTTCCGGCTGGACAGCACGGTGAGATTCAGCTGCGTCGGAGTGGGAGAGACGGTGGTGCTGATTCAGGTCGCTGGCTGCATCGACGATTTACTCCGCCGAAGCGGAAGAAGCGCAAGAGGATTAAAGGAAGGTTTGGTACTGATCTACGAGACGAAGAGCGGAGATTGGAGAAGAGGAGCGGAAATGCCGGAAGTTATGCAACGCGCTGCCTGCGTGTGCGTCGAGTGCTGA

mRNA sequence

ATGGCGTCAATGGCGTCGGACAACAACTCCGGCTCAAACTCTCGCCATTTCTCCTGGTTCATCAAATCTTGCTTCCCTAACCCTAACGATTCCTCCGCCACCGTCCCTGTTCACTCCAAATCTTGCTTCGAAACTACTAATATCGCCTCCAATCACCTCCCCCCACCTCCTGCCGCCGTCTCCTCCCTTCCCGACGACCTTCTTTTGGAGTGCCTTTCCAGAGTTCCGTCCGCATCTCTTCCTTCCGTTTCTCTCGTTTGCCGTCAGTGGTCTCGCCTTCTGCTTTCCTCTTCGTTTGTCGATCTTCGCCGTCTTCGCGGTCATTTGGAGGATACTGTTTATGCTGTTTCTGCAACTAATTACGGCCTATTTGCAGCGAGTTTCAACTTCCGAGACGGCGGATTGTGGAAGGTTGCGCTGTTCAGAGCCAAGGAGAGTTTGTTTCTTAGTAATTTCTATGGATTGCTCTCTCACGCGCGCCTCTCTGCCATTGGACCTAGGATTTACCTAATCGGCCGAAATGCGATGTTCCTTTACGATACCTGGTCTGGAATGGTCACCGCCAGATCTGCGATGAATTTCTCCAGGAAGAAATTCGCCAATGCGGTGATTTCCGGTAGAATCTACGTCGCTGGCGGTGCTGCGACCACGACGGCGGTGGAGATGTATGATCCAGAGACGGACTCTTGGCAAGTCGTTGCTCAGTCAACGAGAAGACGCTACGGTTGTATCGGAGCCGCCGTGGACGGCGTGTTCTACGTGATTGGAGGATTGAAGATCGGGGGAGGAGTTTCAGGTAACCTAACATCACGCGCCGCTGGTGGATCGGAGGCTCATATCTACGCGAGCTCCATGGATATGTACGATGTGGAGGCGCGTACGTGGTTGAGAAGCCGCGCCGTACCCGGAGGAGGCTGCGTGGTGGCGGCGTGTGCGGCGGCGGGACATATCTTCGTTCTCGCTAGCCACGCCGTCGAGCTCTCGTTCTGGAAATTCGACGCAAGAAGAAAGTGCCCTAACAACACCAATAGACACACCACCACCCAAACCTCAACCAAAACCGCCGGATTCGGCGAGTGGTACAGAATAAAAAGTCCGCCGCTCCCGCCGCAGTTCCGGCTGGACAGCACGGTGAGATTCAGCTGCGTCGGAGTGGGAGAGACGGTGGTGCTGATTCAGGTCGCTGGCTGCATCGACGATTTACTCCGCCGAAGCGGAAGAAGCGCAAGAGGATTAAAGGAAGGTTTGGTACTGATCTACGAGACGAAGAGCGGAGATTGGAGAAGAGGAGCGGAAATGCCGGAAGTTATGCAACGCGCTGCCTGCGTGTGCGTCGAGTGCTGA

Coding sequence (CDS)

ATGGCGTCAATGGCGTCGGACAACAACTCCGGCTCAAACTCTCGCCATTTCTCCTGGTTCATCAAATCTTGCTTCCCTAACCCTAACGATTCCTCCGCCACCGTCCCTGTTCACTCCAAATCTTGCTTCGAAACTACTAATATCGCCTCCAATCACCTCCCCCCACCTCCTGCCGCCGTCTCCTCCCTTCCCGACGACCTTCTTTTGGAGTGCCTTTCCAGAGTTCCGTCCGCATCTCTTCCTTCCGTTTCTCTCGTTTGCCGTCAGTGGTCTCGCCTTCTGCTTTCCTCTTCGTTTGTCGATCTTCGCCGTCTTCGCGGTCATTTGGAGGATACTGTTTATGCTGTTTCTGCAACTAATTACGGCCTATTTGCAGCGAGTTTCAACTTCCGAGACGGCGGATTGTGGAAGGTTGCGCTGTTCAGAGCCAAGGAGAGTTTGTTTCTTAGTAATTTCTATGGATTGCTCTCTCACGCGCGCCTCTCTGCCATTGGACCTAGGATTTACCTAATCGGCCGAAATGCGATGTTCCTTTACGATACCTGGTCTGGAATGGTCACCGCCAGATCTGCGATGAATTTCTCCAGGAAGAAATTCGCCAATGCGGTGATTTCCGGTAGAATCTACGTCGCTGGCGGTGCTGCGACCACGACGGCGGTGGAGATGTATGATCCAGAGACGGACTCTTGGCAAGTCGTTGCTCAGTCAACGAGAAGACGCTACGGTTGTATCGGAGCCGCCGTGGACGGCGTGTTCTACGTGATTGGAGGATTGAAGATCGGGGGAGGAGTTTCAGGTAACCTAACATCACGCGCCGCTGGTGGATCGGAGGCTCATATCTACGCGAGCTCCATGGATATGTACGATGTGGAGGCGCGTACGTGGTTGAGAAGCCGCGCCGTACCCGGAGGAGGCTGCGTGGTGGCGGCGTGTGCGGCGGCGGGACATATCTTCGTTCTCGCTAGCCACGCCGTCGAGCTCTCGTTCTGGAAATTCGACGCAAGAAGAAAGTGCCCTAACAACACCAATAGACACACCACCACCCAAACCTCAACCAAAACCGCCGGATTCGGCGAGTGGTACAGAATAAAAAGTCCGCCGCTCCCGCCGCAGTTCCGGCTGGACAGCACGGTGAGATTCAGCTGCGTCGGAGTGGGAGAGACGGTGGTGCTGATTCAGGTCGCTGGCTGCATCGACGATTTACTCCGCCGAAGCGGAAGAAGCGCAAGAGGATTAAAGGAAGGTTTGGTACTGATCTACGAGACGAAGAGCGGAGATTGGAGAAGAGGAGCGGAAATGCCGGAAGTTATGCAACGCGCTGCCTGCGTGTGCGTCGAGTGCTGA

Protein sequence

MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSGDWRRGAEMPEVMQRAACVCVEC

Homology

[Close]

BLAST of Carg06144 vs. NCBI nr
Match: XP_023515721.1 (F-box/kelch-repeat protein At5g26960-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 892.5 bits (2305), Expect = 5.9e-256
Identity = 444/447 (99.33%), Postives = 446/447 (99.78%), Query Frame = 0


Query: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAV 60
           MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPA V
Sbjct: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPATV 60

Query: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120
           SSLPDDLLLECLSRVPSASLPSVSLVCRQWSR+LLSSSFVDLRRLRGHLEDTVYAVSATN
Sbjct: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRILLSSSFVDLRRLRGHLEDTVYAVSATN 120

Query: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180
           YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD
Sbjct: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180

Query: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240
           TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR
Sbjct: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240

Query: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300
           YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA
Sbjct: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300

Query: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEW 360
           VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNN+NRHTTTQTSTKTAGFGEW
Sbjct: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNSNRHTTTQTSTKTAGFGEW 360

Query: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420
           YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY
Sbjct: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420

Query: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 448
           ETKSGDWRRGAEMPEVMQRAACVCVEC
Sbjct: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 447

[Close]

BLAST of Carg06144 vs. NCBI nr
Match: XP_022960568.1 (F-box/kelch-repeat protein At5g26960-like [Cucurbita moschata])

HSP 1 Score: 890.6 bits (2300), Expect = 2.2e-255
Identity = 443/447 (99.11%), Postives = 446/447 (99.78%), Query Frame = 0


Query: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAV 60
           MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAV
Sbjct: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAV 60

Query: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120
           SSLPDDL+LECLSRVPSASLPSVSLVCRQWSRLLL SSFVDLRRLRGHLEDTVYAVSATN
Sbjct: 61  SSLPDDLILECLSRVPSASLPSVSLVCRQWSRLLLYSSFVDLRRLRGHLEDTVYAVSATN 120

Query: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180
           YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD
Sbjct: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180

Query: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240
           TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR
Sbjct: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240

Query: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300
           YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA
Sbjct: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300

Query: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEW 360
           VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNN+NRHTTTQT+TKTAGFGEW
Sbjct: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNSNRHTTTQTATKTAGFGEW 360

Query: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420
           YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY
Sbjct: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420

Query: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 448
           ETKSGDWRRGAEMPEVMQRAACVCVEC
Sbjct: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 447

[Close]

BLAST of Carg06144 vs. NCBI nr
Match: XP_022988113.1 (F-box/kelch-repeat protein At5g26960-like [Cucurbita maxima])

HSP 1 Score: 879.8 bits (2272), Expect = 3.9e-252
Identity = 439/447 (98.21%), Postives = 444/447 (99.33%), Query Frame = 0


Query: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAV 60
           MASMASD NSGSNSRHFSWFIKSCFPNPNDSSATVP+HSKSCFETTNI +NHLPPPPAAV
Sbjct: 1   MASMASD-NSGSNSRHFSWFIKSCFPNPNDSSATVPLHSKSCFETTNITANHLPPPPAAV 60

Query: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120
           SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN
Sbjct: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120

Query: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180
           YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD
Sbjct: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYD 180

Query: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240
           TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR
Sbjct: 181 TWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRR 240

Query: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300
           YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA
Sbjct: 241 YGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRA 300

Query: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEW 360
           VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDA+RKCPNN+NRHTTTQ+STKT GFGEW
Sbjct: 301 VPGGGCVVAACAAAGHIFVLASHAVELSFWKFDAKRKCPNNSNRHTTTQSSTKTTGFGEW 360

Query: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420
           YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY
Sbjct: 361 YRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIY 420

Query: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 448
           ETKSGDWRRGAEMPEVMQRAACVCVEC
Sbjct: 421 ETKSGDWRRGAEMPEVMQRAACVCVEC 446

[Close]

BLAST of Carg06144 vs. NCBI nr
Match: XP_022967413.1 (F-box/kelch-repeat protein At5g26960-like [Cucurbita maxima])

HSP 1 Score: 755.0 bits (1948), Expect = 1.5e-214
Identity = 384/451 (85.14%), Postives = 409/451 (90.69%), Query Frame = 0


Query: 1   MASMASDNNSGSNSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIA--SNHLPPPPA 60
           MAS  + +NS SN RHFSW IKSCFPNPNDSS T+PV SKSCFE+  I+  S  L PPPA
Sbjct: 1   MASHNNSSNSNSN-RHFSWLIKSCFPNPNDSSPTLPVTSKSCFESAAISTHSPSLRPPPA 60

Query: 61  A--VSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAV 120
           A  +SSLPDDLLL+CLSRVPSASLPSVSLV R W+RLLLSS+FVDLRRLRGHLEDTVYAV
Sbjct: 61  AAPISSLPDDLLLDCLSRVPSASLPSVSLVSRHWARLLLSSTFVDLRRLRGHLEDTVYAV 120

Query: 121 SATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAM 180
           SATNYGL+AASFNF +GGLWKVALFRAKES+F S+FYGLLSHARLSAIGPRIYLIGRNAM
Sbjct: 121 SATNYGLYAASFNFPNGGLWKVALFRAKESVFFSDFYGLLSHARLSAIGPRIYLIGRNAM 180

Query: 181 FLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQS 240
           FLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA TTTAVEMYDPETDSWQVVAQS
Sbjct: 181 FLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAPTTTAVEMYDPETDSWQVVAQS 240

Query: 241 TRRRYGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWL 300
            RRRYGCIG AVDGVFYVIGGLKIG GVSGNL S  A  SEAH+YASSMDMYDVEARTWL
Sbjct: 241 ARRRYGCIGTAVDGVFYVIGGLKIGEGVSGNLVSHGACRSEAHVYASSMDMYDVEARTWL 300

Query: 301 RSRAVPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAG 360
           RS AVPGGGCVVAACAAAGHIFVL SHAVELSFWKFDARRKCPN++N     QTSTK+ G
Sbjct: 301 RSSAVPGGGCVVAACAAAGHIFVLTSHAVELSFWKFDARRKCPNSSN-----QTSTKSTG 360

Query: 361 FGEWYRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGL 420
           FGEWYRI+SPPLPPQ RLDSTVRFSCVG+GETV+LIQVAGCIDD+LRRSGRSARGLKEGL
Sbjct: 361 FGEWYRIRSPPLPPQVRLDSTVRFSCVGMGETVMLIQVAGCIDDILRRSGRSARGLKEGL 420

Query: 421 VLIYETKSGDWRRGAEMPEVMQRAACVCVEC 448
           VLIYETKSG+W R A+MPEVMQR AC+CV+C
Sbjct: 421 VLIYETKSGEWSRAADMPEVMQRPACICVKC 445

[Close]

BLAST of Carg06144 vs. NCBI nr
Match: XP_008451069.1 (PREDICTED: F-box/kelch-repeat protein At5g26960 [Cucumis melo])

HSP 1 Score: 752.7 bits (1942), Expect = 7.3e-214
Identity = 387/449 (86.19%), Postives = 404/449 (89.98%), Query Frame = 0


Query: 4   MASDNNSGSNSRHFSWFIKSCFPNPNDSS-ATVPVHSK----SCFETTNIASNHLPPPPA 63
           MASD +S SNSRHFSWFIKSCFPNPNDSS A VP+ SK              +      +
Sbjct: 1   MASD-SSNSNSRHFSWFIKSCFPNPNDSSAAAVPIASKXXXXXXXXXXXXXXHAAVAAAS 60

Query: 64  AVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSA 123
           A+S+LPDDLLLECLSRV S SLPSVSLVCRQW+RLLLS++FVDLRR RG LEDTVYAVSA
Sbjct: 61  AISALPDDLLLECLSRVSSTSLPSVSLVCRQWARLLLSTTFVDLRRFRGQLEDTVYAVSA 120

Query: 124 TNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL 183
           TNYGLFAASFNFRDGGLWKVALF+AKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL
Sbjct: 121 TNYGLFAASFNFRDGGLWKVALFKAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL 180

Query: 184 YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTR 243
           YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA TTTAVEMYDPETDSWQVVAQS R
Sbjct: 181 YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAPTTTAVEMYDPETDSWQVVAQSAR 240

Query: 244 RRYGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRS 303
           RRYGCIGAAVDGVFYVIGGLKIGGG        A+GGSEAHIYASSMDMYDVEARTWLRS
Sbjct: 241 RRYGCIGAAVDGVFYVIGGLKIGGG--------ASGGSEAHIYASSMDMYDVEARTWLRS 300

Query: 304 RAVPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFG 363
           RAVPGGGCVVAACAAAGHI++LASHAVELSFWKFD RRKCPNNTN     QTSTKTAGFG
Sbjct: 301 RAVPGGGCVVAACAAAGHIYILASHAVELSFWKFDGRRKCPNNTN-----QTSTKTAGFG 360

Query: 364 EWYRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL 423
           EWYRI+SPPLPPQFRLDSTVRFSC+G+GETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL
Sbjct: 361 EWYRIRSPPLPPQFRLDSTVRFSCIGMGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL 420

Query: 424 IYETKSGDWRRGAEMPEVMQRAACVCVEC 448
           IYETKSG+WRRGAEMPEVMQRAACVCVEC
Sbjct: 421 IYETKSGEWRRGAEMPEVMQRAACVCVEC 435

[Close]

BLAST of Carg06144 vs. TAIR10
Match: AT5G26960.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 486.1 bits (1250), Expect = 2.3e-137
Identity = 251/438 (57.31%), Postives = 314/438 (71.69%), Query Frame = 0


Query: 13  NSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAVSSLPDDLLLECL 72
           NSRHFSW +KSC PNP+D+ + V +H  S     + A+N      A ++SLPDDLLLEC+
Sbjct: 6   NSRHFSWLMKSCLPNPSDAKSLVQIHQPS-----STAAN----SSATIASLPDDLLLECI 65

Query: 73  SRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFR- 132
           SRVPS+S+PS+++VCR+WSRLL S  F+ LRR  G L  +++A+S  + GLFAA   F+ 
Sbjct: 66  SRVPSSSIPSLAVVCRRWSRLLHSPYFLHLRRRLGLLRHSLFAISTVDSGLFAADLQFQS 125

Query: 133 DGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGMVTARSA 192
           +   WKV+L  +  S+ +   YG LSHAR +AIGPR+Y++ RNA+  YD+W G +  RS 
Sbjct: 126 EIASWKVSLAVSSRSVGVDGSYGSLSHARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSP 185

Query: 193 MNFSRKKFANAVISGRIYVA---GGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAV 252
           M F RKKFA AV+SG+IYVA           VE YDPE + W+VV QS R+RYGCIGAAV
Sbjct: 186 MIFPRKKFAIAVVSGKIYVAXXXXXXXXXXXVEEYDPELNRWEVVTQSARKRYGCIGAAV 245

Query: 253 DGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGGCVV 312
           DGVFYVIGGLKI     GN TSRA     A  YASSMD++DVE+R WLRSR+VPGGGCVV
Sbjct: 246 DGVFYVIGGLKI-----GNETSRAVA---ARAYASSMDLFDVESRQWLRSRSVPGGGCVV 305

Query: 313 AACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKSPPL 372
           AACAA G+++VL SHAVELSFW+FDARR+  N              +GFGEW R+KSPPL
Sbjct: 306 AACAAVGYVYVLTSHAVELSFWRFDARRRGGN--------------SGFGEWQRLKSPPL 365

Query: 373 PPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSGDWR 432
           P Q RLD TVRFSCVGV + V ++QV GCIDDLLRRSGR  RG++E LVL+Y+T  G+WR
Sbjct: 366 PAQVRLDGTVRFSCVGVEDKVAVVQVVGCIDDLLRRSGRGERGIRESLVLLYDTTEGEWR 412

Query: 433 RGAEMPEVMQRAACVCVE 447
           R A++PE++ RAAC CVE
Sbjct: 426 RAADLPEMITRAACACVE 412

[Close]

BLAST of Carg06144 vs. TAIR10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 7.4e-19
Identity = 67/235 (28.51%), Postives = 111/235 (47.23%), Query Frame = 0


Query: 37  VHSKSCFETTN------IASNHLPPPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQW 96
           V+   CF   N      ++ N +  P   +  LPDD+  +CL+ VP A  PS+  VC++W
Sbjct: 13  VNHGMCFSKGNLDLGSRLSENFMDDP--LIPGLPDDVAKQCLALVPRARFPSMGSVCKKW 72

Query: 97  SRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLS 156
             ++ S  F+ +RRL G LE+ +Y V   N G     +   D    K++          +
Sbjct: 73  RFVVQSKEFITVRRLAGMLEEWLY-VLTMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKT 132

Query: 157 NFYGLLSHARLSAIGPRIY----LIGRNAMFLYDTWSGMVTARSAMNFSRKKFANAVISG 216
            F  ++   +L  I         L+    ++ YDT     +  + +  +R  FA A ++G
Sbjct: 133 GFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNG 192

Query: 217 RIYVAGG----AATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAVDGVFYVIGG 258
            +YV GG      + ++ E+YDPET +W  +    R R+GC  +A +G  YV+GG
Sbjct: 193 HVYVVGGHGVDGESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGG 244

[Close]

BLAST of Carg06144 vs. TAIR10
Match: AT2G22030.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-11
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120
           SSLP D++L CL+RV     P++S V + +  L+ S     +R L G  +  VY   +  
Sbjct: 27  SSLPYDVVLNCLARVSRRYYPNLSCVSKSFQSLVRSPELAHMRSLIGKDDPVVYVCFSDT 86

Query: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNF----YGLLSHARLSAIGPRIYLIG---- 180
                   +      W       K++  L++F    Y +L    +S IG +IY +G    
Sbjct: 87  KPFLGRRLD------WFTLNPNEKKTSVLNSFQVFSYYMLYCPSVS-IGSKIYFVGGCMY 146

Query: 181 --RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA-ATTTAVEMYDPETDS 240
                + ++D+WSG +    +M  +R     AV++G++YV GG       VE++DP + +
Sbjct: 147 KCLPGLLIFDSWSGELCVGPSMKEARMLPGVAVVNGKLYVMGGCREDQIQVEVFDPNSQT 206

Query: 241 WQV--VAQSTRRRYG 243
           W+V  ++     RYG
Sbjct: 207 WEVGPLSSDGEVRYG 214

[Close]

BLAST of Carg06144 vs. TAIR10
Match: AT1G60570.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 5.7e-11
Identity = 64/237 (27.00%), Postives = 108/237 (45.57%), Query Frame = 0


Query: 44  ETTNIASNHLP-PPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDL 103
           E   +  N LP   P  + SLP++L+L  L+RV   S  S+SLVC+++  LL S      
Sbjct: 5   EEPPLKKNKLPVEEPTLIPSLPEELILSILARVSRLSYRSLSLVCKRFHSLLTSGEIYRF 64

Query: 104 RRLRGHLEDTVYAVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGL----LSH 163
           R L G+ E+ +Y     ++           G   +  + R K     S+ Y L    +SH
Sbjct: 65  RSLSGYTENCLYVCLRFSH----------TGRSHRWFMLREKNK---SSGYVLAPIPISH 124

Query: 164 ------ARLSAIGPRIYLIG----RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRI 223
                 + + A+G +IY IG     +++ + D WS       +M   R + +  +I G+I
Sbjct: 125 SPSLHASSIVAVGSKIYKIGGVMDGSSVSILDCWSHRWLEAPSMQMERDRPSANLIDGKI 184

Query: 224 YVAGGA-----ATTTAVEMYDPETDSWQ-VVAQSTRRRYGCI-----GAAVDGVFYV 255
           YV GG        +  +E++D +T++W+ V+ +S R  +           VDG  Y+
Sbjct: 185 YVTGGCHRGSYNPSKWMEVFDLKTETWEPVLCRSDRLTFESYHERTNNLLVDGKLYI 228

[Close]

BLAST of Carg06144 vs. TAIR10
Match: AT3G46050.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-11
Identity = 57/193 (29.53%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 55  PPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVY 114
           PPP + SSLPDD++L CL+RV     P++SLVC+ +  LL S      R   G  E  +Y
Sbjct: 13  PPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSCIGKTESFLY 72

Query: 115 AVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIG-- 174
                +   +           W +     K+ L         S   +S IG +IY+IG  
Sbjct: 73  VCLDLHRNCYPDC-----PPRWFIVSPITKQKLKPIPSVTCQSSTVVS-IGSKIYIIGGF 132

Query: 175 -----RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAV---EMYD 234
                   + + D  S        M   R+  A  VI+ +IYV GG+++       E+YD
Sbjct: 133 VDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIEDWGEVYD 192

Query: 235 PETDSWQVVAQST 238
           P+T +W+ V  +T
Sbjct: 193 PKTQTWEPVLPTT 199

[Close]

BLAST of Carg06144 vs. Swiss-Prot
Match: sp|Q6NPN5|FK113_ARATH (F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana OX=3702 GN=At5g26960 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 4.2e-136
Identity = 251/438 (57.31%), Postives = 314/438 (71.69%), Query Frame = 0


Query: 13  NSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAVSSLPDDLLLECL 72
           NSRHFSW +KSC PNP+D+ + V +H  S     + A+N      A ++SLPDDLLLEC+
Sbjct: 6   NSRHFSWLMKSCLPNPSDAKSLVQIHQPS-----STAAN----SSATIASLPDDLLLECI 65

Query: 73  SRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFR- 132
           SRVPS+S+PS+++VCR+WSRLL S  F+ LRR  G L  +++A+S  + GLFAA   F+ 
Sbjct: 66  SRVPSSSIPSLAVVCRRWSRLLHSPYFLHLRRRLGLLRHSLFAISTVDSGLFAADLQFQS 125

Query: 133 DGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGMVTARSA 192
           +   WKV+L  +  S+ +   YG LSHAR +AIGPR+Y++ RNA+  YD+W G +  RS 
Sbjct: 126 EIASWKVSLAVSSRSVGVDGSYGSLSHARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSP 185

Query: 193 MNFSRKKFANAVISGRIYVA---GGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAV 252
           M F RKKFA AV+SG+IYVA           VE YDPE + W+VV QS R+RYGCIGAAV
Sbjct: 186 MIFPRKKFAIAVVSGKIYVAXXXXXXXXXXXVEEYDPELNRWEVVTQSARKRYGCIGAAV 245

Query: 253 DGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGGCVV 312
           DGVFYVIGGLKI     GN TSRA     A  YASSMD++DVE+R WLRSR+VPGGGCVV
Sbjct: 246 DGVFYVIGGLKI-----GNETSRAVA---ARAYASSMDLFDVESRQWLRSRSVPGGGCVV 305

Query: 313 AACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKSPPL 372
           AACAA G+++VL SHAVELSFW+FDARR+  N              +GFGEW R+KSPPL
Sbjct: 306 AACAAVGYVYVLTSHAVELSFWRFDARRRGGN--------------SGFGEWQRLKSPPL 365

Query: 373 PPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSGDWR 432
           P Q RLD TVRFSCVGV + V ++QV GCIDDLLRRSGR  RG++E LVL+Y+T  G+WR
Sbjct: 366 PAQVRLDGTVRFSCVGVEDKVAVVQVVGCIDDLLRRSGRGERGIRESLVLLYDTTEGEWR 412

Query: 433 RGAEMPEVMQRAACVCVE 447
           R A++PE++ RAAC CVE
Sbjct: 426 RAADLPEMITRAACACVE 412

[Close]

BLAST of Carg06144 vs. Swiss-Prot
Match: sp|Q9CAG8|FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-17
Identity = 67/235 (28.51%), Postives = 111/235 (47.23%), Query Frame = 0


Query: 37  VHSKSCFETTN------IASNHLPPPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQW 96
           V+   CF   N      ++ N +  P   +  LPDD+  +CL+ VP A  PS+  VC++W
Sbjct: 13  VNHGMCFSKGNLDLGSRLSENFMDDP--LIPGLPDDVAKQCLALVPRARFPSMGSVCKKW 72

Query: 97  SRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLS 156
             ++ S  F+ +RRL G LE+ +Y V   N G     +   D    K++          +
Sbjct: 73  RFVVQSKEFITVRRLAGMLEEWLY-VLTMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKT 132

Query: 157 NFYGLLSHARLSAIGPRIY----LIGRNAMFLYDTWSGMVTARSAMNFSRKKFANAVISG 216
            F  ++   +L  I         L+    ++ YDT     +  + +  +R  FA A ++G
Sbjct: 133 GFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNG 192

Query: 217 RIYVAGG----AATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAVDGVFYVIGG 258
            +YV GG      + ++ E+YDPET +W  +    R R+GC  +A +G  YV+GG
Sbjct: 193 HVYVVGGHGVDGESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGG 244

[Close]

BLAST of Carg06144 vs. Swiss-Prot
Match: sp|Q9SI02|FBK33_ARATH (F-box/kelch-repeat protein At2g22030 OS=Arabidopsis thaliana OX=3702 GN=At2g22030 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-10
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 61  SSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATN 120
           SSLP D++L CL+RV     P++S V + +  L+ S     +R L G  +  VY   +  
Sbjct: 27  SSLPYDVVLNCLARVSRRYYPNLSCVSKSFQSLVRSPELAHMRSLIGKDDPVVYVCFSDT 86

Query: 121 YGLFAASFNFRDGGLWKVALFRAKESLFLSNF----YGLLSHARLSAIGPRIYLIG---- 180
                   +      W       K++  L++F    Y +L    +S IG +IY +G    
Sbjct: 87  KPFLGRRLD------WFTLNPNEKKTSVLNSFQVFSYYMLYCPSVS-IGSKIYFVGGCMY 146

Query: 181 --RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA-ATTTAVEMYDPETDS 240
                + ++D+WSG +    +M  +R     AV++G++YV GG       VE++DP + +
Sbjct: 147 KCLPGLLIFDSWSGELCVGPSMKEARMLPGVAVVNGKLYVMGGCREDQIQVEVFDPNSQT 206

Query: 241 WQV--VAQSTRRRYG 243
           W+V  ++     RYG
Sbjct: 207 WEVGPLSSDGEVRYG 214

[Close]

BLAST of Carg06144 vs. Swiss-Prot
Match: sp|O22698|FBK24_ARATH (Putative F-box/kelch-repeat protein At1g60570 OS=Arabidopsis thaliana OX=3702 GN=At1g60570 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-09
Identity = 64/237 (27.00%), Postives = 108/237 (45.57%), Query Frame = 0


Query: 44  ETTNIASNHLP-PPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDL 103
           E   +  N LP   P  + SLP++L+L  L+RV   S  S+SLVC+++  LL S      
Sbjct: 5   EEPPLKKNKLPVEEPTLIPSLPEELILSILARVSRLSYRSLSLVCKRFHSLLTSGEIYRF 64

Query: 104 RRLRGHLEDTVYAVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGL----LSH 163
           R L G+ E+ +Y     ++           G   +  + R K     S+ Y L    +SH
Sbjct: 65  RSLSGYTENCLYVCLRFSH----------TGRSHRWFMLREKNK---SSGYVLAPIPISH 124

Query: 164 ------ARLSAIGPRIYLIG----RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRI 223
                 + + A+G +IY IG     +++ + D WS       +M   R + +  +I G+I
Sbjct: 125 SPSLHASSIVAVGSKIYKIGGVMDGSSVSILDCWSHRWLEAPSMQMERDRPSANLIDGKI 184

Query: 224 YVAGGA-----ATTTAVEMYDPETDSWQ-VVAQSTRRRYGCI-----GAAVDGVFYV 255
           YV GG        +  +E++D +T++W+ V+ +S R  +           VDG  Y+
Sbjct: 185 YVTGGCHRGSYNPSKWMEVFDLKTETWEPVLCRSDRLTFESYHERTNNLLVDGKLYI 228

[Close]

BLAST of Carg06144 vs. Swiss-Prot
Match: sp|Q9LX87|FBK74_ARATH (Putative F-box/kelch-repeat protein At3g46050 OS=Arabidopsis thaliana OX=3702 GN=At3g46050 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-09
Identity = 57/193 (29.53%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 55  PPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVY 114
           PPP + SSLPDD++L CL+RV     P++SLVC+ +  LL S      R   G  E  +Y
Sbjct: 13  PPPTSFSSLPDDIVLNCLARVSRFHYPTLSLVCKGFRSLLDSRELHATRSCIGKTESFLY 72

Query: 115 AVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIG-- 174
                +   +           W +     K+ L         S   +S IG +IY+IG  
Sbjct: 73  VCLDLHRNCYPDC-----PPRWFIVSPITKQKLKPIPSVTCQSSTVVS-IGSKIYIIGGF 132

Query: 175 -----RNAMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAV---EMYD 234
                   + + D  S        M   R+  A  VI+ +IYV GG+++       E+YD
Sbjct: 133 VDGHSSRRLIVLDCPSHGWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIEDWGEVYD 192

Query: 235 PETDSWQVVAQST 238
           P+T +W+ V  +T
Sbjct: 193 PKTQTWEPVLPTT 199

[Close]

BLAST of Carg06144 vs. TrEMBL
Match: tr|A0A1S3BQR0|A0A1S3BQR0_CUCME (F-box/kelch-repeat protein At5g26960 OS=Cucumis melo OX=3656 GN=LOC103492456 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 4.8e-214
Identity = 387/449 (86.19%), Postives = 404/449 (89.98%), Query Frame = 0


Query: 4   MASDNNSGSNSRHFSWFIKSCFPNPNDSS-ATVPVHSK----SCFETTNIASNHLPPPPA 63
           MASD +S SNSRHFSWFIKSCFPNPNDSS A VP+ SK              +      +
Sbjct: 1   MASD-SSNSNSRHFSWFIKSCFPNPNDSSAAAVPIASKXXXXXXXXXXXXXXHAAVAAAS 60

Query: 64  AVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSA 123
           A+S+LPDDLLLECLSRV S SLPSVSLVCRQW+RLLLS++FVDLRR RG LEDTVYAVSA
Sbjct: 61  AISALPDDLLLECLSRVSSTSLPSVSLVCRQWARLLLSTTFVDLRRFRGQLEDTVYAVSA 120

Query: 124 TNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL 183
           TNYGLFAASFNFRDGGLWKVALF+AKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL
Sbjct: 121 TNYGLFAASFNFRDGGLWKVALFKAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFL 180

Query: 184 YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTR 243
           YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA TTTAVEMYDPETDSWQVVAQS R
Sbjct: 181 YDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAPTTTAVEMYDPETDSWQVVAQSAR 240

Query: 244 RRYGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRS 303
           RRYGCIGAAVDGVFYVIGGLKIGGG        A+GGSEAHIYASSMDMYDVEARTWLRS
Sbjct: 241 RRYGCIGAAVDGVFYVIGGLKIGGG--------ASGGSEAHIYASSMDMYDVEARTWLRS 300

Query: 304 RAVPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFG 363
           RAVPGGGCVVAACAAAGHI++LASHAVELSFWKFD RRKCPNNTN     QTSTKTAGFG
Sbjct: 301 RAVPGGGCVVAACAAAGHIYILASHAVELSFWKFDGRRKCPNNTN-----QTSTKTAGFG 360

Query: 364 EWYRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL 423
           EWYRI+SPPLPPQFRLDSTVRFSC+G+GETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL
Sbjct: 361 EWYRIRSPPLPPQFRLDSTVRFSCIGMGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVL 420

Query: 424 IYETKSGDWRRGAEMPEVMQRAACVCVEC 448
           IYETKSG+WRRGAEMPEVMQRAACVCVEC
Sbjct: 421 IYETKSGEWRRGAEMPEVMQRAACVCVEC 435

[Close]

BLAST of Carg06144 vs. TrEMBL
Match: tr|A0A0A0M2H5|A0A0A0M2H5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600860 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 4.7e-209
Identity = 380/453 (83.89%), Postives = 397/453 (87.64%), Query Frame = 0


Query: 4   MASDNNSGSNSRHFSWFIKSCFPNP-----NDSSATVPVHS----KSCFETTNIASNHLP 63
           MASD NS SNSRHFSWFIKSCFPNP            P+ S                   
Sbjct: 1   MASD-NSNSNSRHFSWFIKSCFPNPXXXXXXXXXXXXPIASXXXXXXXXXXXXXXXXXXX 60

Query: 64  PPPAAVSSLPDDLLLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVY 123
              +A+S+LPDDLLLECLSRVPS SLPSVSLVCRQW+RLLLS++FVDLRR+RG LEDTVY
Sbjct: 61  XXXSAISALPDDLLLECLSRVPSTSLPSVSLVCRQWARLLLSTTFVDLRRVRGQLEDTVY 120

Query: 124 AVSATNYGLFAASFNFRDGGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRN 183
           AVSATNYGLFAASFNFRDGGLWKVALF+AKESLFLSNFYGLLSHARLSAIGPRIYLIGRN
Sbjct: 121 AVSATNYGLFAASFNFRDGGLWKVALFKAKESLFLSNFYGLLSHARLSAIGPRIYLIGRN 180

Query: 184 AMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVA 243
           AMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGA TTTAVEMYDPETDSWQVVA
Sbjct: 181 AMFLYDTWSGMVTARSAMNFSRKKFANAVISGRIYVAGGAPTTTAVEMYDPETDSWQVVA 240

Query: 244 QSTRRRYGCIGAAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEART 303
           QS RRRYGCIGAAVDGVFYVIGGLKIGGG        A+GGSEAHIYASSMDMYDVEART
Sbjct: 241 QSARRRYGCIGAAVDGVFYVIGGLKIGGG--------ASGGSEAHIYASSMDMYDVEART 300

Query: 304 WLRSRAVPGGGCVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKT 363
           WLRSRAVPGGGCVVAACAAAGHI++LASHAVELSFWKFD RRKC NN+N     QTSTKT
Sbjct: 301 WLRSRAVPGGGCVVAACAAAGHIYILASHAVELSFWKFDGRRKCANNSN-----QTSTKT 360

Query: 364 AGFGEWYRIKSPPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKE 423
           AGFGEWYRI+SPPLPPQFRLDSTVRFSC+G+GETVVLIQVAGCIDDLLRRSGRSARGLKE
Sbjct: 361 AGFGEWYRIRSPPLPPQFRLDSTVRFSCIGMGETVVLIQVAGCIDDLLRRSGRSARGLKE 420

Query: 424 GLVLIYETKSGDWRRGAEMPEVMQRAACVCVEC 448
           GLVLIYETKSG+WRRGAEMPEVMQRAACVCVEC
Sbjct: 421 GLVLIYETKSGEWRRGAEMPEVMQRAACVCVEC 439

[Close]

BLAST of Carg06144 vs. TrEMBL
Match: tr|A0A2N9FX83|A0A2N9FX83_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19740 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 3.3e-162
Identity = 292/440 (66.36%), Postives = 346/440 (78.64%), Query Frame = 0


Query: 13  NSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAVSSLPDDLLLECL 72
           NSRHFSW +KSCFPNP+D++    + ++          NHL    + +SSLPDDLLLECL
Sbjct: 6   NSRHFSWLMKSCFPNPHDTNNKSLIQTQXXXXXNIHIQNHL----STLSSLPDDLLLECL 65

Query: 73  SRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFRD 132
           SR+P +SLPS+SLVCR+W+R L SSSF DLRR +G + + V+AVSAT+YGLFAAS  F D
Sbjct: 66  SRLPPSSLPSLSLVCRRWARFLDSSSFFDLRRRQGRIHNIVFAVSATDYGLFAASLRFHD 125

Query: 133 -----GGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGMVT 192
                   WKV+LF A +++ L NF+GLLS ARLSAIGPRI++IGRNAM  YDTWSG V 
Sbjct: 126 DEDDADWKWKVSLFLANDAVSLGNFHGLLSQARLSAIGPRIFIIGRNAMVRYDTWSGTVV 185

Query: 193 ARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAA 252
           ARS+M F RKKFA AV+SG+IY AGG + T AVE YDP TD+W+VV+ + RRRYGCIGA+
Sbjct: 186 ARSSMIFPRKKFATAVVSGKIYAAGGGSRTDAVEEYDPHTDTWRVVSNAPRRRYGCIGAS 245

Query: 253 VDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGGCV 312
           VDGVFYVIGGLKI  G   N   RA   +EAH+YASSMD+YDVEAR WLRSRAVPGGGCV
Sbjct: 246 VDGVFYVIGGLKI--GAPANEFPRATANAEAHVYASSMDLYDVEARVWLRSRAVPGGGCV 305

Query: 313 VAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKSPP 372
           VAACAAAGH++VLASHAVELSFWKFDARRK  +NTN      T T  +GFGEW R+KSPP
Sbjct: 306 VAACAAAGHVYVLASHAVELSFWKFDARRKSISNTN-----NTITNNSGFGEWCRLKSPP 365

Query: 373 LPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSGDW 432
           LP Q RLDSTVRFSCVGV E VVL+QV GCIDDLLRRSGR+ RGL+EGLVL+Y++  G+W
Sbjct: 366 LPAQVRLDSTVRFSCVGVEEKVVLVQVTGCIDDLLRRSGRTLRGLREGLVLVYDSVGGEW 425

Query: 433 RRGAEMPEVMQRAACVCVEC 448
            RG ++PEV++RAACVCVEC
Sbjct: 426 SRGPDLPEVIRRAACVCVEC 434

[Close]

BLAST of Carg06144 vs. TrEMBL
Match: tr|A0A2I4FN80|A0A2I4FN80_9ROSI (F-box/kelch-repeat protein At5g26960-like OS=Juglans regia OX=51240 GN=LOC109000611 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 5.1e-155
Identity = 285/442 (64.48%), Postives = 345/442 (78.05%), Query Frame = 0


Query: 13  NSRHFSWFIKSCFPNPN----DSSATVPVH-SKSCFETTNIASNHLPPPPAAVSSLPDDL 72
           NSRHFSW +KSCFPNPN    +S   +P++    C  +T             VSSLPDDL
Sbjct: 6   NSRHFSWLMKSCFPNPNHTCPNSFIRLPLNVPDHCSVST------------TVSSLPDDL 65

Query: 73  LLECLSRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAAS 132
           LLECLSRVP +SLP++SLVC +WS LL SS F+DLRR  G LE+ V+AVSA + GL+AAS
Sbjct: 66  LLECLSRVPPSSLPALSLVCLRWSHLLQSSYFLDLRRRLGRLENFVFAVSAADSGLYAAS 125

Query: 133 FNFRD--GGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGM 192
             F D    LWKVA F   +++ L +F+GLLSHARLSA+G RI++IGR++M  YDTWSG 
Sbjct: 126 LRFHDDADALWKVAFFLPNDAVSLGSFHGLLSHARLSAVGHRIFIIGRDSMVRYDTWSGT 185

Query: 193 VTARSAMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIG 252
           V ARSAM F RKKFA AV+SG+IY AGG   T+AVE YDP++D+W+VVA + RRRYGC+G
Sbjct: 186 VVARSAMIFPRKKFATAVVSGKIYAAGGGPRTSAVEEYDPDSDAWRVVAHAPRRRYGCVG 245

Query: 253 AAVDGVFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGG 312
           AAVDGVFYVIGGLKIG  V  +  SRA   +EAH+YASSMD+Y+VEARTW+RSRA+PGGG
Sbjct: 246 AAVDGVFYVIGGLKIGASV--DEPSRATAKAEAHVYASSMDLYNVEARTWMRSRAIPGGG 305

Query: 313 CVVAACAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKS 372
           CVVAACAAAG+++VLASHAVELSFW+FDARR+  +N+N+      S+  +GFGEW R+KS
Sbjct: 306 CVVAACAAAGYVYVLASHAVELSFWRFDARRRSTSNSNK-----GSSVNSGFGEWCRLKS 365

Query: 373 PPLPPQFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSG 432
           PPLP Q RLDSTVRFSCVGVG  VVLIQV GCIDDLLRRSGR  R L+EGLVL+Y++ +G
Sbjct: 366 PPLPAQVRLDSTVRFSCVGVGVKVVLIQVKGCIDDLLRRSGRGLRDLREGLVLLYDSATG 425

Query: 433 DWRRGAEMPEVMQRAACVCVEC 448
           DW RGA++PEV+QR ACVCVEC
Sbjct: 426 DWSRGADLPEVIQRTACVCVEC 428

[Close]

BLAST of Carg06144 vs. TrEMBL
Match: tr|A0A2I4EVC5|A0A2I4EVC5_9ROSI (F-box/kelch-repeat protein At5g26960-like OS=Juglans regia OX=51240 GN=LOC108993042 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.6e-153
Identity = 284/437 (64.99%), Postives = 340/437 (77.80%), Query Frame = 0


Query: 13  NSRHFSWFIKSCFPNPNDSSATVPVHSKSCFETTNIASNHLPPPPAAVSSLPDDLLLECL 72
           NSRHFSW +KSCFPNP  +S     H  S        ++H    P  VSSLP+DLLLECL
Sbjct: 6   NSRHFSWLMKSCFPNPKYTSPDSFSHPHSHIRLPLNVADHC-SLPTTVSSLPNDLLLECL 65

Query: 73  SRVPSASLPSVSLVCRQWSRLLLSSSFVDLRRLRGHLEDTVYAVSATNYGLFAASFNFRD 132
           SRVP +SLP++SLVC +W+RLL S  F DLRR  G LE+ V+AVSAT+ GL+AAS  F D
Sbjct: 66  SRVPPSSLPALSLVCLRWARLLQSPYFFDLRRRLGRLENFVFAVSATDSGLYAASLRFHD 125

Query: 133 --GGLWKVALFRAKESLFLSNFYGLLSHARLSAIGPRIYLIGRNAMFLYDTWSGMVTARS 192
               LWKVA F   +++ L +F+GLLSHARLSA+G RI++IGRN+M  YDTWSG V ARS
Sbjct: 126 DADALWKVAFFLPNDAVSLGSFHGLLSHARLSAVGHRIFIIGRNSMVRYDTWSGTVVARS 185

Query: 193 AMNFSRKKFANAVISGRIYVAGGAATTTAVEMYDPETDSWQVVAQSTRRRYGCIGAAVDG 252
           AM F RKKFA AV+SG+IY AGG   T+AVE Y+P++D+W+VVA + R+RYGCIGA+VDG
Sbjct: 186 AMIFPRKKFATAVVSGKIYAAGGGPRTSAVEEYNPDSDTWRVVAHAPRKRYGCIGASVDG 245

Query: 253 VFYVIGGLKIGGGVSGNLTSRAAGGSEAHIYASSMDMYDVEARTWLRSRAVPGGGCVVAA 312
           VFYVIGGLKIG  V  +  SRAA  +EAH+YASSMD+YDVEARTWLRSRAVPGGGCVVAA
Sbjct: 246 VFYVIGGLKIGASV--DEPSRAA-NAEAHVYASSMDLYDVEARTWLRSRAVPGGGCVVAA 305

Query: 313 CAAAGHIFVLASHAVELSFWKFDARRKCPNNTNRHTTTQTSTKTAGFGEWYRIKSPPLPP 372
           CAAAGH++VLASHAVELSFW+FDARR+  +N+N       S+  +GFGEW R+KSPPL  
Sbjct: 306 CAAAGHVYVLASHAVELSFWRFDARRRTTSNSN-----NGSSVNSGFGEWCRLKSPPLLA 365

Query: 373 QFRLDSTVRFSCVGVGETVVLIQVAGCIDDLLRRSGRSARGLKEGLVLIYETKSGDWRRG 432
           Q RLD TVRFSCVGVG  VVL+QV GCIDDLLRRSGR  RGL+EGLVL+Y++  GDW RG
Sbjct: 366 QVRLDCTVRFSCVGVGVKVVLVQVTGCIDDLLRRSGRGLRGLREGLVLLYDSAGGDWSRG 425

Query: 433 AEMPEVMQRAACVCVEC 448
           A++PEV++ AACV VEC
Sbjct: 426 ADLPEVIRHAACVSVEC 433

The following BLAST results are available for this feature:

BLAST of Carg06144 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515721.1	5.9e-256	99.33	F-box/kelch-repeat protein At5g26960-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960568.1	2.2e-255	99.11	F-box/kelch-repeat protein At5g26960-like [Cucurbita moschata]	[more]
XP_022988113.1	3.9e-252	98.21	F-box/kelch-repeat protein At5g26960-like [Cucurbita maxima]	[more]
XP_022967413.1	1.5e-214	85.14	F-box/kelch-repeat protein At5g26960-like [Cucurbita maxima]	[more]
XP_008451069.1	7.3e-214	86.19	PREDICTED: F-box/kelch-repeat protein At5g26960 [Cucumis melo]	[more]

BLAST of Carg06144 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26960.1	2.3e-137	57.31	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	7.4e-19	28.51	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G22030.1	1.1e-11	27.69	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G60570.1	5.7e-11	27.00	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G46050.1	9.7e-11	29.53	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of Carg06144 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NPN5\|FK113_ARATH	4.2e-136	57.31	F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana OX=3702 GN=At5g2696...	[more]
sp\|Q9CAG8\|FBK28_ARATH	1.3e-17	28.51	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
sp\|Q9SI02\|FBK33_ARATH	2.1e-10	27.69	F-box/kelch-repeat protein At2g22030 OS=Arabidopsis thaliana OX=3702 GN=At2g2203...	[more]
sp\|O22698\|FBK24_ARATH	1.0e-09	27.00	Putative F-box/kelch-repeat protein At1g60570 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9LX87\|FBK74_ARATH	1.8e-09	29.53	Putative F-box/kelch-repeat protein At3g46050 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg06144 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQR0\|A0A1S3BQR0_CUCME	4.8e-214	86.19	F-box/kelch-repeat protein At5g26960 OS=Cucumis melo OX=3656 GN=LOC103492456 PE=...	[more]
tr\|A0A0A0M2H5\|A0A0A0M2H5_CUCSA	4.7e-209	83.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600860 PE=4 SV=1	[more]
tr\|A0A2N9FX83\|A0A2N9FX83_FAGSY	3.3e-162	66.36	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19740 PE=4 SV=1	[more]
tr\|A0A2I4FN80\|A0A2I4FN80_9ROSI	5.1e-155	64.48	F-box/kelch-repeat protein At5g26960-like OS=Juglans regia OX=51240 GN=LOC109000...	[more]
tr\|A0A2I4EVC5\|A0A2I4EVC5_9ROSI	1.6e-153	64.99	F-box/kelch-repeat protein At5g26960-like OS=Juglans regia OX=51240 GN=LOC108993...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR032675	LRR_dom_sf
IPR015915	Kelch-typ_b-propeller
IPR001810	F-box_dom
IPR006652	Kelch_1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06144-RA	Carg06144-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 207..250 e-value: 7.1E-9 score: 45.5
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 196..234 e-value: 6.0E-5 score: 22.5
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 63..103 e-value: 1.5E-6 score: 37.8
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 61..96 e-value: 2.7E-6 score: 27.0
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 57..102 score: 10.61
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 160..355 e-value: 5.2E-23 score: 83.4
IPR015915	Kelch-type beta propeller	SUPERFAMILY	SSF117281	Kelch motif	coord: 147..444
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 58..159 e-value: 7.5E-8 score: 33.6
None	No IPR available	PANTHER	PTHR24412:SF282	SUBFAMILY NOT NAMED	coord: 12..440
None	No IPR available	PANTHER	PTHR24412	FAMILY NOT NAMED	coord: 12..440
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 56..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06144	Cla011081	Watermelon (97103) v1	carwmB0018
Carg06144	Csa1G600860	Cucumber (Chinese Long) v2	carcuB0015
Carg06144	MELO3C015613	Melon (DHL92) v3.5.1	carmeB0019
Carg06144	ClCG03G014250	Watermelon (Charleston Gray)	carwcgB0024
Carg06144	CSPI01G29560	Wild cucumber (PI 183967)	carcpiB0015
Carg06144	Cucsa.142600	Cucumber (Gy14) v1	carcgyB0020
Carg06144	CmaCh11G008050	Cucurbita maxima (Rimu)	carcmaB0027
Carg06144	CmaCh10G009870	Cucurbita maxima (Rimu)	carcmaB0026
Carg06144	CmoCh11G008080	Cucurbita moschata (Rifu)	carcmoB0028
Carg06144	CmoCh10G010410	Cucurbita moschata (Rifu)	carcmoB0027
Carg06144	Lsi06G004280	Bottle gourd (USVL1VR-Ls)	carlsiB021
Carg06144	Cp4.1LG18g01150	Cucurbita pepo (Zucchini)	carcpeB0033
Carg06144	Cp4.1LG04g11540	Cucurbita pepo (Zucchini)	carcpeB0037
Carg06144	CsGy1G028860	Cucumber (Gy14) v2	carcgybB0014
Carg06144	MELO3C015613.2	Melon (DHL92) v3.6.1	carmedB0020
Carg06144	CsaV3_1G041980	Cucumber (Chinese Long) v3	carcucB0015
Carg06144	Cla97C03G064440	Watermelon (97103) v2	carwmbB0020
Carg06144	Bhi02G001386	Wax gourd	carwgoB0026

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06144	Carg18016	Silver-seed gourd	carcarB017

The following block(s) are covering this gene:

None