Carg06132 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06132
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	molybdopterin biosynthesis protein CNX1 isoform X2
Location	Cucurbita_argyrosperma_scaffold_026 : 1236150 .. 1239748 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGATTCAACACTCTTCCAATGGCGGATTTCTCTTCTGTCAAGTCCACCGCCATGATTTCCCCTGATGAAGCTCTCAGAATTGTGCTGGAAGTCGCTCAACGCCTCCCGCCCGTTGCCGTCTCTCTTCACGATGCTCTTGGTAAGGTCTTGGCTCAAGACATTCGCGCTCCCGACCCTTTGCCTCCTTATCCAGCCTCCATTAAGGTAGTTCCACTATCCAGTGAGCTCAATTTTTGTTCATCTGGACTTGAGTTTTTATGTTAGGTTTAGGATCGGTCGTTTTCTTAGTTGACCTGAAGAAAATTCGATTGCTACTTGTGGAGCTTGATGGAGTTTGTTTGTGGTTTTTACTTGTTCTTTGGTTTTTGATTGGAGAAATGAAATGATGTCGGATTGCTTGGTTGGAGTGGAAGAGAACGTTCTTGCTTCCAGTGGAGATGATAGATTATGTTTCAGTGGATTTTCTTTTTGCTTTGTTTTCTGATTGGAAGACATTATGTTGTTCTAATGTCTGATTTTTGAAATTCTTTTGAAGTGTGAGGGCCTCATGACACTTGGGAATCGTTCTTGTAGGATGGTTATGCAGTGGTTGCTTCAGATGGGCCTGGGGATTATCCGGTGATTACAGAATCTAGAGCTGGAAATGATGGAGTTGGTGTGACAGTTACTCCGGGAACCGTTGCATATGTAACCACTGGAGGTGCTTTTCTAATCATATTTGATCATAACCAAGTTGCCATTTTGTGGTTAGCATGTGCTTAAAGAGGGTTTAGTGCTGAGAACATTAATTTTGTTGTTAGACTACATTACATATGTGCTTGAGTGATTAAGTAGTGTAGTTAATTAGCGTTTCTTGCTGAAAATTTCGAAAGGAGTTCTTGTTGATGTACTGATAGTATCCTTTTCTGAGAAGAGAAACAATTTCATTGAGAGATGAAATAGGTGGGGTTAAAATTCTTGACACCTTAGGAAAAATCTCCCATTTAAAATCAAAGACGAGAGGCTAATCTGAGAAAGGATGTTTACATTTATACCAGTGTATAGCATGAAAAAGAACATAATCCAAAAAAATAGTAAAAGGTCGAGAAGGTATCCCTGAAAATTCAAGCATTCTGTTCGTCCCAAAGATACTAGAGGAAAACTCTACCGACAGCCAACTATACAACCTTCTTGGCACCTTAAAAGGGATGTCCCACAAAAATAGTGGCCAACATATTAACAACGCAATTAGGAATGATGTTTGGTTGTTGGATATCTCCTAGCTAAAAAATTTCTATGTGATGCTCTAGTAATGGAGGAATATATGAATGAATCTAAACTACATTCTATGATGATATGATGGTTGAGAAAGGCTTAAAAGAATTGAAGTTACTTCCTATACCAATAACGTGCACCTGAGCAAGAAAAGAAAAGGTGCTGTTGGTTTTCCCCATTCAGTCTACACATAACACGCCAGCTTAGTGGATTGGTAGCAGTTCTGGAACAATGAGATAAAGGTTTGATCCAAAGTATTCAAGGACATCATGATGAGACTTAGAGTTAATAGCAACTTTGGTAGGGCTAAGCCTGATATTATTATTATTATTTTTTTTATGTGGATAGCAGCTTAACAGCCTAAATACCTCTCACAAAGTGTAGAGAAGAAATTCACAGCTTTTGTAGTCTCCCAAAATCTGCCCCGTGTGTTTCAAGAATGATGGGACCCCTAACCATCTTTTGTCCACTGCATTGTTGCCTTGCAAGGGTGGAATTTTATCTGCGAACCATTTGAGTTTGTGGTACCCCTTGAGGTGGAAGATGGAGTTTCTAAATGTCTGTCCGGCTGTTGGTTTAAGGATAAAACCAGGTTTCTTTTGTTGAATGTGGTTTGGGTCCTCCAGCTTCTATGGAAAGAAAGAAACTCTAGAATATCTTTACATTAGTATGAATCTTTTGTTAATTTTTGTGACTGTGTATGGTGTATAGCCTTAAATTTGAGTGTCCTTGACAAATCTTTTATAATGCTCCTATCATTCGTATCAATCTATGTCGAAGGCCTTTGGTTTCACTTCTTTTTTGGTGTAGGACCATCTTATCTTTATGGCCTTCAGGTTGTTTTTTGAGACTTGGAGTAATGAAATCAAATCTATAGTTGTGTATTATTGTTTTCAATTTAAATTCAGATCGGTTATATAAAAAGTTAAAAAAGAGAACGGTCATTGTGTTATTCAACTGTTTTCTTCTCTTTTCTTACTGTCTTGATTTTTACCCTTCTGAAATACCGATTCATTCTTCTTGTTACATTTTTAAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACGGAAAAAATTGAATCCAAGCATGTTAAAATAATGGTGAAAGCCAGGAAGGGTGCTGATATCCGCCCAGTGGTATTAGTTCATTACTTTCTTTTTAAAGAAAATAAAAACTTTATGTCCTTCAAAGGTTCTATTGCAATGACAATTATTTATGAGGAAATGAACAATTTTCTTGAGAGAATACAACACAAATAATTCAAACGGACAAGAATTATACCGAAGTGTTAAGCACAAAGAGGAACAAAGAAAAATTGAAATAATGAATGCAATTTTTTTAGATGTGAAAGAACTACCATTAACAACTAAAGAATTCATTAGAATGGAAGTTATGTTGTGGTCTCTTTGGCAATAGGCTAGAGGAGTTGAGCTCTTCTTGGTCACCCTTTCTTCATCTTCTTGTAAAATAGCTCCTCTTCAGTCTTCAGTAGATACTGATTGGTAAGCTTTTTCAAAGCACCCTCGGTTATCTTTCCATATTATTTTTCACTTTCAACTTTTTATTGAAAAGCAGTGCTTCGTTTTCAACATTCTATTGATAATTGCATAAACTTTCAACACCAGACTTATTATGAAAAGGAAATGAGTTTCTCTTCCATCTCAGTTAAAGGGTGGAAATATCCTCCATTATCATTTTCAGTGGAGGCTAAATCTTTTAGTATGGCTTTTGATGGAGATAAAATGGAGGAAAAGTTTGTATAGAGAAAAGGAACTGTTTTTTCTCTGTTTTATGCGGTTGTTTAGTTCTAACTCGGAGGTTGTTTGAGGAGTATACAGTTAGAGCAAAGGGGTACCGAATTCATTAGACAATTCTACATTGACGACTTTCATTTATGGATGAAGTCTTTAACTTGCGTGGATGTGTCCTTGAAATTTTGTAAATTAAAACCTCAACTTTATCATTGGTATCAACATTTTACTCCATTGAAGCCTGTATGCAGTTTTCTCCTAAGAAGAGGTAGGGAGAAGGAAAGAAATTGAGGAGGGAGACCTAGTTATGTATCATCTACTTGAAGGAAGGTTCTTTGATGGGGACCTATCAAAAACTAAAGGAAAATAAGATTGACCTTTGCGAAATATTGAAGGAGATTGGATTGAATGCTTGTTTAGTTGACTTGCCTCATCTACGTATATCTAACACATACAAAGTACCTTTTTTTGACAAAATATTTTCTTTCCAGCGGAATTCCAGATTTCCACCTAAACTTCAGCAGTAAGGTTAGGAATCTGGGTAATAGCTATGGATCCATCTCAACTATTGATTGA

mRNA sequence

TCTGATTCAACACTCTTCCAATGGCGGATTTCTCTTCTGTCAAGTCCACCGCCATGATTTCCCCTGATGAAGCTCTCAGAATTGTGCTGGAAGTCGCTCAACGCCTCCCGCCCGTTGCCGTCTCTCTTCACGATGCTCTTGGTAAGGTCTTGGCTCAAGACATTCGCGCTCCCGACCCTTTGCCTCCTTATCCAGCCTCCATTAAGGATGGTTATGCAGTGGTTGCTTCAGATGGGCCTGGGGATTATCCGGTGATTACAGAATCTAGAGCTGGAAATGATGGAGTTGGTGTGACAGTTACTCCGGGAACCGTTGCATATGTAACCACTGGAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACGGAAAAAATTGAATCCAAGCATGTTAAAATAATGGTGAAAGCCAGGAAGGGTGCTGATATCCGCCCAGTGGCTAGAGGAGTTGAGCTCTTCTTGGTCACCCTTTCTTCATCTTCTTGTAAAATAGCTCCTCTTCAGTCTTCAGTAGATACTGATTGCGGAATTCCAGATTTCCACCTAAACTTCAGCAGTAAGGTTAGGAATCTGGGTAATAGCTATGGATCCATCTCAACTATTGATTGA

Coding sequence (CDS)

ATGGCGGATTTCTCTTCTGTCAAGTCCACCGCCATGATTTCCCCTGATGAAGCTCTCAGAATTGTGCTGGAAGTCGCTCAACGCCTCCCGCCCGTTGCCGTCTCTCTTCACGATGCTCTTGGTAAGGTCTTGGCTCAAGACATTCGCGCTCCCGACCCTTTGCCTCCTTATCCAGCCTCCATTAAGGATGGTTATGCAGTGGTTGCTTCAGATGGGCCTGGGGATTATCCGGTGATTACAGAATCTAGAGCTGGAAATGATGGAGTTGGTGTGACAGTTACTCCGGGAACCGTTGCATATGTAACCACTGGAGGACCAATACCTGATGGTGCTGATGCGGTAGTTCAAGTTGAGGACACGGAAAAAATTGAATCCAAGCATGTTAAAATAATGGTGAAAGCCAGGAAGGGTGCTGATATCCGCCCAGTGGCTAGAGGAGTTGAGCTCTTCTTGGTCACCCTTTCTTCATCTTCTTGTAAAATAGCTCCTCTTCAGTCTTCAGTAGATACTGATTGCGGAATTCCAGATTTCCACCTAAACTTCAGCAGTAAGGTTAGGAATCTGGGTAATAGCTATGGATCCATCTCAACTATTGATTGA

Protein sequence

MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKIESKHVKIMVKARKGADIRPVARGVELFLVTLSSSSCKIAPLQSSVDTDCGIPDFHLNFSSKVRNLGNSYGSISTID

Homology

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BLAST of Carg06132 vs. NCBI nr
Match: XP_022960991.1 (molybdopterin biosynthesis protein CNX1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS
Sbjct: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVE 149
           EKIESKHVKIMVKARKGADIRPV   +E
Sbjct: 121 EKIESKHVKIMVKARKGADIRPVGCDIE 148

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BLAST of Carg06132 vs. NCBI nr
Match: XP_023516001.1 (molybdopterin biosynthesis protein CNX1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS
Sbjct: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVE 149
           EKIESKHVKIMVKARKGADIRPV   +E
Sbjct: 121 EKIESKHVKIMVKARKGADIRPVGCDIE 148

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BLAST of Carg06132 vs. NCBI nr
Match: XP_022988040.1 (molybdopterin biosynthesis protein CNX1 [Cucurbita maxima])

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 140/149 (93.96%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MADFS-SVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPA 60
           MADFS  VKSTAMISPDEALRIVLEVAQRLPPV VSLHDA GKVLAQDIRAPDPLPPYPA
Sbjct: 1   MADFSCCVKSTAMISPDEALRIVLEVAQRLPPVGVSLHDAFGKVLAQDIRAPDPLPPYPA 60

Query: 61  SIKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVED 120
           SIKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVED
Sbjct: 61  SIKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVED 120

Query: 121 TEKIESKHVKIMVKARKGADIRPVARGVE 149
           TEKI+SKHVKIMVKARKGADIRPV   +E
Sbjct: 121 TEKIDSKHVKIMVKARKGADIRPVGCDIE 149

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BLAST of Carg06132 vs. NCBI nr
Match: XP_022147602.1 (molybdopterin biosynthesis protein CNX1 isoform X1 [Momordica charantia])

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 136/161 (84.47%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MAD S  KS+AMIS DEALRIVLEVA+RLPPVAVSL+DALGKVLAQDIRAPDPLPPYPAS
Sbjct: 1   MADHSCAKSSAMISTDEALRIVLEVARRLPPVAVSLNDALGKVLAQDIRAPDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPG+YPVITESRAGNDG GVTVTPGTVAYVTTGGPIP+GADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGEYPVITESRAGNDGAGVTVTPGTVAYVTTGGPIPEGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVELFLVTLSSSSCKI 162
           E+IESK VKIMVK RKGADIRPV       L+TL S  C I
Sbjct: 121 ERIESKRVKIMVKTRKGADIRPV-------LMTLPSQGCDI 154

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BLAST of Carg06132 vs. NCBI nr
Match: XP_022147603.1 (molybdopterin biosynthesis protein CNX1 isoform X2 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MAD S  KS+AMIS DEALRIVLEVA+RLPPVAVSL+DALGKVLAQDIRAPDPLPPYPAS
Sbjct: 1   MADHSCAKSSAMISTDEALRIVLEVARRLPPVAVSLNDALGKVLAQDIRAPDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPG+YPVITESRAGNDG GVTVTPGTVAYVTTGGPIP+GADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGEYPVITESRAGNDGAGVTVTPGTVAYVTTGGPIPEGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVE 149
           E+IESK VKIMVK RKGADIRPV   +E
Sbjct: 121 ERIESKRVKIMVKTRKGADIRPVGCDIE 148

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BLAST of Carg06132 vs. TAIR10
Match: AT5G20990.1 (molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1))

HSP 1 Score: 212.2 bits (539), Expect = 2.9e-55
Identity = 110/144 (76.39%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 10  TAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVA 69
           T MI  +EALRIV  V++RLPPV VSL++ALGKVLA+DIRAPDPLPPYPAS+KDGYAVVA
Sbjct: 14  TEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVA 73

Query: 70  SDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-----E 129
           SDGPG+YPVITESRAGNDG+GVTVTPGTVAYVTTGGPIPDGADAVVQVEDT+ I     E
Sbjct: 74  SDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTKVIGDVSTE 133

Query: 130 SKHVKIMVKARKGADIRPVARGVE 149
           SK VKI+++ +KG DIR V   +E
Sbjct: 134 SKRVKILIQTKKGTDIRRVGCDIE 157

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BLAST of Carg06132 vs. Swiss-Prot
Match: sp|Q39054|CNX1_ARATH (Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana OX=3702 GN=CNX1 PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 5.2e-54
Identity = 110/144 (76.39%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 10  TAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVA 69
           T MI  +EALRIV  V++RLPPV VSL++ALGKVLA+DIRAPDPLPPYPAS+KDGYAVVA
Sbjct: 14  TEMIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPPYPASVKDGYAVVA 73

Query: 70  SDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-----E 129
           SDGPG+YPVITESRAGNDG+GVTVTPGTVAYVTTGGPIPDGADAVVQVEDT+ I     E
Sbjct: 74  SDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTKVIGDVSTE 133

Query: 130 SKHVKIMVKARKGADIRPVARGVE 149
           SK VKI+++ +KG DIR V   +E
Sbjct: 134 SKRVKILIQTKKGTDIRRVGCDIE 157

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BLAST of Carg06132 vs. Swiss-Prot
Match: sp|Q9NQX3|GEPH_HUMAN (Gephyrin OS=Homo sapiens OX=9606 GN=GPHN PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.8e-29
Identity = 79/176 (44.89%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           + S D+A   VLE+   L    ++  D +G+VLAQD+ A D LPP+PAS+KDGYAV A+D
Sbjct: 323 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 382

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-------E 131
           GPGD  +I ES+AG      TV PG V  VTTG PIP GADAVVQVEDTE I       E
Sbjct: 383 GPGDRFIIGESQAGEQPT-QTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 442

Query: 132 SKHVKIMVKARKGADIRPVARGVELFLVTLSSSSCKIAPLQSSVDTDCGIPDFHLN 181
              V+I+V+AR G DIRP+   ++     L+  +  + P +  +    G+ +  +N
Sbjct: 443 ELEVRILVQARPGQDIRPIGHDIKRGECVLAKGT-HMGPSEIGLLATVGVTEVEVN 496

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BLAST of Carg06132 vs. Swiss-Prot
Match: sp|Q8BUV3|GEPH_MOUSE (Gephyrin OS=Mus musculus OX=10090 GN=Gphn PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 9.8e-29
Identity = 79/176 (44.89%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           + S D+A   VLE+   L    ++  D +G+VLAQD+ A D LPP+PAS+KDGYAV A+D
Sbjct: 356 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 415

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-------E 131
           GPGD  +I ES+AG      TV PG V  VTTG PIP GADAVVQVEDTE I       E
Sbjct: 416 GPGDRFIIGESQAGEQPT-QTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 475

Query: 132 SKHVKIMVKARKGADIRPVARGVELFLVTLSSSSCKIAPLQSSVDTDCGIPDFHLN 181
              V+I+V+AR G DIRP+   ++     L+  +  + P +  +    G+ +  +N
Sbjct: 476 ELEVRILVQARPGQDIRPIGHDIKRGECVLAKGT-HMGPSEIGLLATVGVTEVEVN 529

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BLAST of Carg06132 vs. Swiss-Prot
Match: sp|Q03555|GEPH_RAT (Gephyrin OS=Rattus norvegicus OX=10116 GN=Gphn PE=1 SV=3)

HSP 1 Score: 128.3 bits (321), Expect = 9.8e-29
Identity = 79/176 (44.89%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           + S D+A   VLE+   L    ++  D +G+VLAQD+ A D LPP+PAS+KDGYAV A+D
Sbjct: 355 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 414

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-------E 131
           GPGD  +I ES+AG      TV PG V  VTTG PIP GADAVVQVEDTE I       E
Sbjct: 415 GPGDRFIIGESQAGEQPT-QTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 474

Query: 132 SKHVKIMVKARKGADIRPVARGVELFLVTLSSSSCKIAPLQSSVDTDCGIPDFHLN 181
              V+I+V+AR G DIRP+   ++     L+  +  + P +  +    G+ +  +N
Sbjct: 475 ELEVRILVQARPGQDIRPIGHDIKRGECVLAKGT-HMGPSEIGLLATVGVTEVEVN 528

[Close]

BLAST of Carg06132 vs. Swiss-Prot
Match: sp|Q9PW38|GEPH_CHICK (Gephyrin OS=Gallus gallus OX=9031 GN=GPHN PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28
Identity = 75/144 (52.08%), Postives = 94/144 (65.28%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           + S D+A   VLE+   L    ++  D +G+VLAQD+ A D LPP+PAS+KDGYAV A+D
Sbjct: 323 LTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAAD 382

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEKI-------E 131
           GPGD  +I ES+AG      TV PG V  VTTG PIP GADAVVQVEDTE I       E
Sbjct: 383 GPGDRFIIGESQAGEQPT-QTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTE 442

Query: 132 SKHVKIMVKARKGADIRPVARGVE 149
              V+I+V+AR G DIRP+   ++
Sbjct: 443 ELEVRILVQARPGQDIRPIGHDIK 465

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BLAST of Carg06132 vs. TrEMBL
Match: tr|A0A1S3BQ07|A0A1S3BQ07_CUCME (molybdopterin biosynthesis protein CNX1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492442 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.1e-64
Identity = 131/148 (88.51%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MAD S VKSTAMISPDEAL+ VLEVAQ LPP+ VSLHDA+GKVLAQDIRA DPLPPYPAS
Sbjct: 1   MADHSCVKSTAMISPDEALKTVLEVAQCLPPIVVSLHDAIGKVLAQDIRASDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPG+YPVI ESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGEYPVIIESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVE 149
           EKIESK VKI VKARKGADIRPV   +E
Sbjct: 121 EKIESKRVKIKVKARKGADIRPVGCDIE 148

[Close]

BLAST of Carg06132 vs. TrEMBL
Match: tr|A0A1S4DYE7|A0A1S4DYE7_CUCME (molybdopterin biosynthesis protein CNX1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492442 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.1e-64
Identity = 131/148 (88.51%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MAD S VKSTAMISPDEAL+ VLEVAQ LPP+ VSLHDA+GKVLAQDIRA DPLPPYPAS
Sbjct: 1   MADHSCVKSTAMISPDEALKTVLEVAQCLPPIVVSLHDAIGKVLAQDIRASDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPG+YPVI ESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGEYPVIIESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVE 149
           EKIESK VKI VKARKGADIRPV   +E
Sbjct: 121 EKIESKRVKIKVKARKGADIRPVGCDIE 148

[Close]

BLAST of Carg06132 vs. TrEMBL
Match: tr|A0A0A0LZS5|A0A0A0LZS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600220 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.0e-62
Identity = 131/154 (85.06%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MADFSSVKSTAMISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPAS 60
           MAD S VKSTAMIS DEAL+ VLEVA+ LPP+ VSLHDA+GKVLAQDIRA DPLPPYPAS
Sbjct: 1   MADHSCVKSTAMISSDEALKTVLEVARCLPPIVVSLHDAMGKVLAQDIRASDPLPPYPAS 60

Query: 61  IKDGYAVVASDGPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120
           IKDGYAVVASDGPG+YPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT
Sbjct: 61  IKDGYAVVASDGPGEYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDT 120

Query: 121 EKIESKHVKIMVKARKGADIRPVARGVELFLVTL 155
           EKIESK VKI VKARKGADIRPV     LF + +
Sbjct: 121 EKIESKRVKIKVKARKGADIRPVVLVHYLFFLII 154

[Close]

BLAST of Carg06132 vs. TrEMBL
Match: tr|A0A061GUP2|A0A061GUP2_THECC (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_041148 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 116/150 (77.33%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           MIS DEAL+IVL VA++LPPV V LH ALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD
Sbjct: 16  MISADEALQIVLSVAKQLPPVTVPLHQALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 75

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEK-----IESK 131
           GPG+YPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTE+     +ESK
Sbjct: 76  GPGEYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEQVKASSVESK 135

Query: 132 HVKIMVKARKGADIRPVARGVELFLVTLSS 157
            V+++V+ RKG DIRPV   ++   + L S
Sbjct: 136 RVRMLVQTRKGVDIRPVGCDIQKDALVLKS 165

[Close]

BLAST of Carg06132 vs. TrEMBL
Match: tr|A0A061GUX4|A0A061GUX4_THECC (Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) isoform 4 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_041148 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 116/150 (77.33%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 12  MISPDEALRIVLEVAQRLPPVAVSLHDALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 71
           MIS DEAL+IVL VA++LPPV V LH ALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD
Sbjct: 11  MISADEALQIVLSVAKQLPPVTVPLHQALGKVLAQDIRAPDPLPPYPASIKDGYAVVASD 70

Query: 72  GPGDYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEK-----IESK 131
           GPG+YPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTE+     +ESK
Sbjct: 71  GPGEYPVITESRAGNDGVGVTVTPGTVAYVTTGGPIPDGADAVVQVEDTEQVKASSVESK 130

Query: 132 HVKIMVKARKGADIRPVARGVELFLVTLSS 157
            V+++V+ RKG DIRPV   ++   + L S
Sbjct: 131 RVRMLVQTRKGVDIRPVGCDIQKDALVLKS 160

The following BLAST results are available for this feature:

BLAST of Carg06132 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960991.1	2.3e-71	97.30	molybdopterin biosynthesis protein CNX1 isoform X1 [Cucurbita moschata]	[more]
XP_023516001.1	2.3e-71	97.30	molybdopterin biosynthesis protein CNX1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988040.1	4.1e-68	93.96	molybdopterin biosynthesis protein CNX1 [Cucurbita maxima]	[more]
XP_022147602.1	2.1e-64	84.47	molybdopterin biosynthesis protein CNX1 isoform X1 [Momordica charantia]	[more]
XP_022147603.1	1.1e-63	88.51	molybdopterin biosynthesis protein CNX1 isoform X2 [Momordica charantia]	[more]

BLAST of Carg06132 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20990.1	2.9e-55	76.39	molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzym...	[more]

BLAST of Carg06132 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39054\|CNX1_ARATH	5.2e-54	76.39	Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana OX=3702 GN=CNX1 ...	[more]
sp\|Q9NQX3\|GEPH_HUMAN	9.8e-29	44.89	Gephyrin OS=Homo sapiens OX=9606 GN=GPHN PE=1 SV=1	[more]
sp\|Q8BUV3\|GEPH_MOUSE	9.8e-29	44.89	Gephyrin OS=Mus musculus OX=10090 GN=Gphn PE=1 SV=2	[more]
sp\|Q03555\|GEPH_RAT	9.8e-29	44.89	Gephyrin OS=Rattus norvegicus OX=10116 GN=Gphn PE=1 SV=3	[more]
sp\|Q9PW38\|GEPH_CHICK	1.3e-28	52.08	Gephyrin OS=Gallus gallus OX=9031 GN=GPHN PE=1 SV=1	[more]

BLAST of Carg06132 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ07\|A0A1S3BQ07_CUCME	9.1e-64	88.51	molybdopterin biosynthesis protein CNX1 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S4DYE7\|A0A1S4DYE7_CUCME	9.1e-64	88.51	molybdopterin biosynthesis protein CNX1 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0LZS5\|A0A0A0LZS5_CUCSA	1.0e-62	85.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600220 PE=4 SV=1	[more]
tr\|A0A061GUP2\|A0A061GUP2_THECC	1.0e-54	77.33	Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzym...	[more]
tr\|A0A061GUX4\|A0A061GUX4_THECC	1.0e-54	77.33	Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzym...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0032324	molybdopterin cofactor biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036135	MoeA_linker/N_sf
IPR038987	MoeA-like
IPR005110	MoeA_linker/N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032324	molybdopterin cofactor biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06132-RA	Carg06132-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005110	MoeA, N-terminal and linker domain	PFAM	PF03453	MoeA_N	coord: 13..143 e-value: 7.5E-30 score: 103.7
None	No IPR available	GENE3D	G3DSA:2.170.190.11		coord: 55..146 e-value: 3.5E-31 score: 109.3
None	No IPR available	PANTHER	PTHR10192:SF5	GEPHYRIN	coord: 7..146
IPR038987	Molybdopterin biosynthesis protein MoeA-like	PANTHER	PTHR10192	MOLYBDOPTERIN BIOSYNTHESIS PROTEIN	coord: 7..146
IPR036135	MoeA, N-terminal and linker domain superfamily	SUPERFAMILY	SSF63882	MoeA N-terminal region -like	coord: 11..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06132	Csa1G600220	Cucumber (Chinese Long) v2	carcuB0015
Carg06132	CSPI01G29420	Wild cucumber (PI 183967)	carcpiB0015
Carg06132	CmoCh11G007960	Cucurbita moschata (Rifu)	carcmoB0028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06132	Silver-seed gourd	carcarB017
Carg06132	Cucumber (Gy14) v2	carcgybB0014
Carg06132	Cucumber (Gy14) v1	carcgyB0020
Carg06132	Cucurbita maxima (Rimu)	carcmaB0026
Carg06132	Cucurbita maxima (Rimu)	carcmaB0027
Carg06132	Cucurbita moschata (Rifu)	carcmoB0027
Carg06132	Cucurbita pepo (Zucchini)	carcpeB0033
Carg06132	Cucurbita pepo (Zucchini)	carcpeB0037
Carg06132	Cucumber (Chinese Long) v3	carcucB0015
Carg06132	Bottle gourd (USVL1VR-Ls)	carlsiB021
Carg06132	Melon (DHL92) v3.5.1	carmeB0019
Carg06132	Melon (DHL92) v3.6.1	carmedB0020
Carg06132	Watermelon (Charleston Gray)	carwcgB0024
Carg06132	Watermelon (97103) v1	carwmB0018
Carg06132	Watermelon (97103) v2	carwmbB0020
Carg06132	Wax gourd	carwgoB0027