Carg05981 (gene) Silver-seed gourd

Overview
NameCarg05981
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein yippee-like
LocationCucurbita_argyrosperma_scaffold_026 : 541896 .. 544910 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTAATTTAGGAGTGAAAAAAAGGGAAGAGGAAAAGTTGATTGCATTAGCATTTAGCATCCACATGGCATTGGGTTAAGGGGGAGGGACCGTCTTTCACAGGGAAAGTGGTATTTATAGTTGGCGAGACATGGCCAAGCTTCTTCTGTGTGCATATTTCTTGTAACTGAGAACACAGGTAAAGTTCCATTTTGATTCTCTTTTTCTTCCCTTTCTTTCTTGCTTCTCACTTCATTCTTCCTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTAGCTACTCAGTTTCTGATCTCCGATTTCTCCATTTTCGATTATTTTTATGAGATTTCGTAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTCATTCACAATAACTCTTCATTTCTGATTTCTGATTTCATTGTTTCTCTCAATTTTTCGTAAATTTTCCGATGCGGATGAGAATATTGACTAACCCTTTAATATTGTAACAAAAATATGGTGCTGGACTGTTGAAATTGTTGTTGTTGTTGTTAGGGGCTGTTCTTAACTTGATGATCTCTAAATTTAATTAGAAATTTGATTGAGTATATATGTTGCCTCTATGGCTGCTCTTTGTTGGCTCTACCCTTTGAATGTTCATTTTCAGACTAAACGATTCTAGGAATGTCATTGGAGAAAAGCTTTCTGACTTTATTGTTTCCTGTGTTTGTTTCTATTATTCAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTGTAAGTTTTCGTGGATGATAGTGGTAATTTGGCCAAATGTTTCCATTAAAGATCCCCAATCCCCCTTTTTTTTTTCTTTCCAATCACAGACTAAAAGCACAGGATAAAGCTCAAATCCTAACTTGTTCAATCTCCTCTTTTCATTACCTAACTGCTCCTTTTAAGATGTAGTTTTCCTCTTATCGTTCTGATTCATAACTTTTGTATACATTGCCGCTCTTCCTTCGCTATTGTTTTTGGTTTTTTGTATAATTCAAGTGAATGTGTTCGTCATTTTAGAAGTGAAGGTTCACCGTCTTTTATATGGTGATAAAATTGCTTATTTGTTCATGTTCTCTTTAAGAATTGAGTCTAAACTTGTCTTTTTAAACAGAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTAAGTAATTTTACAGTACCTTGCTTTGAATCATTACTTTTAAGACATGAACTTGCTCTGAAAAGACCATCTTACTTGATCCTAGTTAGGAAAATGATATTATCTGGTTCTTTGAATCAGCTCCTCGTTAATCATTTTGGACAAAAAAGTATTACATGAAGGAGCATGAATTACAATAGATTTGCTATCTCATTATGTGTATATCCCTTTTAACTGTCCAATAATCGAAAAGATACAAATATACCTATCGTGTCGGTGAAATTGGCTACACGTAAGGTGTCCAATCATTTCCTAGCTTATAATATCATTGCTGAAATTGTTCATGATGAACTGATTTGCAAGACTACTGAAAACAACCTCAGAATTTTAGATGTTAAATTATCGTAGCTTAAGCTAGATCGACCAATTAAAAATCATATCTTGAACTATTGAGTCTAGATATATCCTTTTTTCCCCCTCGATTTTTCGTTAGATTACTTCAAATTTCGTTTTAACGTATAATAATTTCATCATCCCCACCCCCACCTAGGTCGTTTGTCGTGGTTGGCTTGCTTTTGTTTTCGTGCTATTTTATGGGGTCCTTTGGTAAGAAAGAAACAGGGCTTGAAGAGAGCTTGGGGTGAGGTAGGGTCCTTTATTAGATTTCATGCATCTCTCTAGGTTTCTGTTCATAAAGCTTTTTGTAATCACCCTTTAGGACTTATTTTGCTTGATTGGAGCTCTTTTTAGGCTCATTCGACGACTCCTCTTGGGGGTGGTATTTCTGTATGCCCCTTGTATTCTTTCATTTGATCTCAATGAAAGCGACTTTTCATCGAAATAACCACAAATTATTCCATATTGCACAAAATCTCATTATCGAGTATAACCGTTCTCGAACGTTCTATTATCACATTGAATTCTTACATTTATATATCTGAGAGGTCTGCAGTGTAGTAGTAGTAAAGTTTTATATAGTAGTAGATCCATGCAGTTGAGAATTTGTGGAAGAAAACTTGCAATGAGTAGTGAAGTAGTGGACATAGAATTAGGCGTATAAGCATTTGTTGTTTGATGAACAGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGATGATGATGATGATGATGATGAAGATGATGCCTACTCCCCTTATTATTCCAAACTGTACATTCTGCTCTTCCAATGTTCATATTCTTCAACTCATTGTTCTTCATCAGTTCCTCATTTCAGCACAGCTACTAAACTTGCTTGCTGCTTTGTAGCCGAACTGGACACATTTCATTGTGATTCTTCTTTAACTTGATGATATTCCTTAACTTTGCAACAGGATGGAATGTTTTTCATTTCAGTTTTGGTCTTCTTTTGCCCCTAATCTTTGTTATTTTGAATTTTGAATTTATTAGTTTGCTTATACCAGTGAATTAATGTAGTGATGATACGACAGACATTAAAACATAATGAAACTGGTAATCTCATAAGTTTTGCTTTTATTTAGACACCTTCAAAAATTGATTGGAAACTTA

mRNA sequence

AAATTAATTTAGGAGTGAAAAAAAGGGAAGAGGAAAAGTTGATTGCATTAGCATTTAGCATCCACATGGCATTGGGTTAAGGGGGAGGGACCGTCTTTCACAGGGAAAGTGGTATTTATAGTTGGCGAGACATGGCCAAGCTTCTTCTGTGTGCATATTTCTTGTAACTGAGAACACAGGAGATTTCGTAGTCATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGATGATGATGATGATGATGATGAAGATGATGCCTACTCCCCTTATTATTCCAAACTGTACATTCTGCTCTTCCAATGTTCATATTCTTCAACTCATTGTTCTTCATCAGTTCCTCATTTCAGCACAGCTACTAAACTTGCTTGCTGCTTTGTAGCCGAACTGGACACATTTCATTGTGATTCTTCTTTAACTTGATGATATTCCTTAACTTTGCAACAGGATGGAATGTTTTTCATTTCAGTTTTGGTCTTCTTTTGCCCCTAATCTTTGTTATTTTGAATTTTGAATTTATTAGTTTGCTTATACCAGTGAATTAATGTAGTGATGATACGACAGACATTAAAACATAATGAAACTGGTAATCTCATAAGTTTTGCTTTTATTTAGACACCTTCAAAAATTGATTGGAAACTTA

Coding sequence (CDS)

ATGGGGAGGTTGTTCGTGGTGAGCCTCGAAGGAAGGATCTATAGCTGCAAGCACTGCCGCACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGTCTTTCCAATGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTCACTGTTGGAGTGAAAGAAACGAGAATGATGATGACGGGGATGCATACCGTTGCTGATATCTTCTGCGTTGGCTGTGGATCAATTGTGGGATGGACATACGTAAGATATCATACAATTTTTTATGCTGTTATGTTCTTCTTTTTTATGATCTTTGATCGTTCACTTCAGGAAACTGCCTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAGTCGGTATTGGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAGTTATTGGGTCAGCCATGCTCGAAGTCATGAAGTAGCACATGGTGGAGGAAGTGATGCAGATGAAGCTTGA

Protein sequence

MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Homology
[Close]
BLAST of Carg05981 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 134/157 (85.35%), Postives = 134/157 (85.35%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]
BLAST of Carg05981 vs. NCBI nr
Match: XP_004138427.1 (PREDICTED: protein yippee-like [Cucumis sativus] >XP_011656410.1 PREDICTED: protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_6G011570 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 4.9e-64
Identity = 128/157 (81.53%), Postives = 130/157 (82.80%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE AHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]
BLAST of Carg05981 vs. NCBI nr
Match: XP_008441452.1 (PREDICTED: protein yippee-like [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 126/157 (80.25%), Postives = 129/157 (82.17%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK+FQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKTFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE  HGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETGHGGGSDADEA 134

[Close]
BLAST of Carg05981 vs. NCBI nr
Match: XP_022938898.1 (protein yippee-like [Cucurbita moschata] >XP_022992902.1 protein yippee-like [Cucurbita maxima] >XP_023551124.1 protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023551125.1 protein yippee-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61
Identity = 123/156 (78.85%), Postives = 128/156 (82.05%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLF+KVVNV++GVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFSKVVNVSIGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADE 157
           SVLER KVSGPGGTSYWVSHA  HE AHGGGSDADE
Sbjct: 121 SVLERSKVSGPGGTSYWVSHAHGHETAHGGGSDADE 133

[Close]
BLAST of Carg05981 vs. NCBI nr
Match: XP_022133719.1 (protein yippee-like [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 126/157 (80.25%), Postives = 128/157 (81.53%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNVT+G KETRMM
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVTMGAKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 121 SVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 132

[Close]
BLAST of Carg05981 vs. TAIR10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-52
Identity = 104/158 (65.82%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SKSF C+HGKAYLFNKV NV++G  E R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTG HTVADIFCV CGSIVGW Y                       ETA EKNQKYKEGK
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKY-----------------------ETAHEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWV-SHARSHEVAHGGGSDADEA 158
           SVLERFK+SGP G++YWV SH R     H GGSDAD+A
Sbjct: 121 SVLERFKISGPDGSNYWVSSHGR-----HIGGSDADDA 130

[Close]
BLAST of Carg05981 vs. TAIR10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-45
Identity = 94/157 (59.87%), Postives = 108/157 (68.79%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQ RHGKAYLF+KVVNV  G KE RMM
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTV DI+CV CGS VGW Y                       E AFEKNQKYKEGK
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKY-----------------------EFAFEKNQKYKEGK 153

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KV GP G +YWV+     +    G SD D+A
Sbjct: 154 SVLERYKVWGPDGNNYWVA-----QEVEAGDSDTDDA 162

[Close]
BLAST of Carg05981 vs. TAIR10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-40
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF C+HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG HTVADIFCV CGS+VGW Y                       E A++K+QKYKEGK
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKY-----------------------EIAYDKSQKYKEGK 113

Query: 121 SVLERFKVSGPGGTSY 137
            +LERFKV GP G  Y
Sbjct: 121 FILERFKVLGPYGGGY 113

[Close]
BLAST of Carg05981 vs. TAIR10
Match: AT3G55890.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 154.5 bits (389), Expect = 5.6e-38
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F+V LEG IY CK C+THL+  +DI+SKSFQC++G+AYLFN VVNV+VG KE RMM
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG+H V DIFCVGCGS VGW Y                       E A EK+QKYKEGK
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKY-----------------------EFAHEKSQKYKEGK 116

Query: 121 SVLERFKVSGPGGTSYWVS 140
           SVLE +K+SGP  ++  VS
Sbjct: 121 SVLELYKISGPHDSNDLVS 116

[Close]
BLAST of Carg05981 vs. TAIR10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 137.5 bits (345), Expect = 7.1e-33
Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F V LEGR Y C+ CRTHLAL +D+VS+SF CR GKAYLFN+ VN+++G  E R+M
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           ++GMHTVADIFC  CG  VGW Y                       E+A EK QKYKEGK
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKY-----------------------ESAHEKAQKYKEGK 105

Query: 121 SVLERFKV 129
            VLER ++
Sbjct: 121 FVLERGRI 105

[Close]
BLAST of Carg05981 vs. Swiss-Prot
Match: sp|P59234|YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-47
Identity = 100/156 (64.10%), Postives = 111/156 (71.15%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV++LEG+IYSCKHC THLAL E+IVSKSF C+HGKAYLF+KVVNVT G  E RMM
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCV CGSIVGW Y                       ETA EK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKY-----------------------ETAHEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADE 157
           SVLERFK++GP G+ YW SH       H  GSDAD+
Sbjct: 121 SVLERFKITGPDGSHYWASHD-----THVAGSDADD 128

[Close]
BLAST of Carg05981 vs. Swiss-Prot
Match: sp|Q9C777|YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-44
Identity = 94/157 (59.87%), Postives = 108/157 (68.79%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSKSFQ RHGKAYLF+KVVNV  G KE RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTV DI+CV CGS VGW Y                       E AFEKNQKYKEGK
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKY-----------------------EFAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KV GP G +YWV+     +    G SD D+A
Sbjct: 121 SVLERYKVWGPDGNNYWVA-----QEVEAGDSDTDDA 129

[Close]
BLAST of Carg05981 vs. Swiss-Prot
Match: sp|Q9SR97|YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.7e-39
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SKSF C+HG+AYLF+ VVNVTVG KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG HTVADIFCV CGS+VGW Y                       E A++K+QKYKEGK
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKY-----------------------EIAYDKSQKYKEGK 113

Query: 121 SVLERFKVSGPGGTSY 137
            +LERFKV GP G  Y
Sbjct: 121 FILERFKVLGPYGGGY 113

[Close]
BLAST of Carg05981 vs. Swiss-Prot
Match: sp|Q9LY56|YIPL4_ARATH (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-36
Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F+V LEG IY CK C+THL+  +DI+SKSFQC++G+AYLFN VVNV+VG KE RMM
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           +TG+H V DIFCVGCGS VGW Y                       E A EK+QKYKEGK
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKY-----------------------EFAHEKSQKYKEGK 116

Query: 121 SVLERFKVSGPGGTSYWVS 140
           SVLE +K+SGP  ++  VS
Sbjct: 121 SVLELYKISGPHDSNDLVS 116

[Close]
BLAST of Carg05981 vs. Swiss-Prot
Match: sp|Q9FN32|YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-31
Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGR+F V LEGR Y C+ CRTHLAL +D+VS+SF CR GKAYLFN+ VN+++G  E R+M
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           ++GMHTVADIFC  CG  VGW Y                       E+A EK QKYKEGK
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKY-----------------------ESAHEKAQKYKEGK 105

Query: 121 SVLERFKV 129
            VLER ++
Sbjct: 121 FVLERGRI 105

[Close]
BLAST of Carg05981 vs. TrEMBL
Match: tr|A0A0A0KBL4|A0A0A0KBL4_CUCSA (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 128/157 (81.53%), Postives = 130/157 (82.80%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSKSFQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKSFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE AHGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]
BLAST of Carg05981 vs. TrEMBL
Match: tr|A0A1S3B3I1|A0A1S3B3I1_CUCME (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.1e-63
Identity = 126/157 (80.25%), Postives = 129/157 (82.17%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK+FQ RHGKAYLFNKVVNV+VGVKETRMM
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSKTFQSRHGKAYLFNKVVNVSVGVKETRMM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGWTY                       ETAFEKNQKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWTY-----------------------ETAFEKNQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGPGGTSYWVSH  SHE  HGGGSDADEA
Sbjct: 121 SVLERFKVSGPGGTSYWVSHTHSHETGHGGGSDADEA 134

[Close]
BLAST of Carg05981 vs. TrEMBL
Match: tr|A0A2I4EQZ0|A0A2I4EQZ0_9ROSI (Protein yippee-like OS=Juglans regia OX=51240 GN=LOC108991873 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52
Identity = 111/157 (70.70%), Postives = 120/157 (76.43%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHCRTHLAL EDIVSKSF CRHGKAYLFNKVVNV+VG KE R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCRTHLALCEDIVSKSFHCRHGKAYLFNKVVNVSVGEKEERVM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
            TGMHTVADIFCVGCGSIVGWTY                       ETA EK+QKYKEGK
Sbjct: 61  TTGMHTVADIFCVGCGSIVGWTY-----------------------ETAHEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLER+KVSGP G++YWVSH      AH GGSDAD+A
Sbjct: 121 SVLERYKVSGPDGSNYWVSHG-----AHIGGSDADDA 129

[Close]
BLAST of Carg05981 vs. TrEMBL
Match: tr|V4SME6|V4SME6_9ROSI (Protein yippee-like OS=Citrus clementina OX=85681 GN=CICLE_v10033070mg PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.3e-52
Identity = 110/157 (70.06%), Postives = 120/157 (76.43%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHCRTHLAL ED+VSKSF CRHGKAYLF+KVVNV+VG KE R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGW Y                       ETA EK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWKY-----------------------ETAHEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGP G++YWVSH      AH GGSDAD+A
Sbjct: 121 SVLERFKVSGPDGSNYWVSHE-----AHVGGSDADDA 129

[Close]
BLAST of Carg05981 vs. TrEMBL
Match: tr|A0A067FS54|A0A067FS54_CITSI (Protein yippee-like OS=Citrus sinensis OX=2711 GN=CISIN_1g032990mg PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.3e-52
Identity = 110/157 (70.06%), Postives = 120/157 (76.43%), Query Frame = 0 

Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKSFQCRHGKAYLFNKVVNVTVGVKETRMM 60
           MGRLFVV+LEG+IYSCKHCRTHLAL ED+VSKSF CRHGKAYLF+KVVNV+VG KE R+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLM 60

Query: 61  MTGMHTVADIFCVGCGSIVGWTYVRYHTIFYAVMFFFFMIFDRSLQETAFEKNQKYKEGK 120
           MTGMHTVADIFCVGCGSIVGW Y                       ETA EK+QKYKEGK
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWKY-----------------------ETAHEKSQKYKEGK 120

Query: 121 SVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 158
           SVLERFKVSGP G++YWVSH      AH GGSDAD+A
Sbjct: 121 SVLERFKVSGPDGSNYWVSHE-----AHVGGSDADDA 129

The following BLAST results are available for this feature:
BLAST of Carg05981 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923565.11.6e-6785.35protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cu... [more]
XP_004138427.14.9e-6481.53PREDICTED: protein yippee-like [Cucumis sativus] >XP_011656410.1 PREDICTED: prot... [more]
XP_008441452.13.2e-6380.25PREDICTED: protein yippee-like [Cucumis melo][more]
XP_022938898.11.7e-6178.85protein yippee-like [Cucurbita moschata] >XP_022992902.1 protein yippee-like [Cu... [more]
XP_022133719.13.9e-6180.25protein yippee-like [Momordica charantia][more]
BLAST of Carg05981 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40110.11.8e-5265.82Yippee family putative zinc-binding protein[more]
AT3G11230.21.6e-4559.87Yippee family putative zinc-binding protein[more]
AT3G08990.12.1e-4058.09Yippee family putative zinc-binding protein[more]
AT3G55890.15.6e-3856.83Yippee family putative zinc-binding protein[more]
AT5G53940.17.1e-3353.91Yippee family putative zinc-binding protein[more]
BLAST of Carg05981 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P59234|YIPL_SOLTU1.3e-4764.10Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
sp|Q9C777|YIPL3_ARATH2.9e-4459.87Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ... [more]
sp|Q9SR97|YIPL1_ARATH3.7e-3958.09Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ... [more]
sp|Q9LY56|YIPL4_ARATH1.0e-3656.83Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ... [more]
sp|Q9FN32|YIPL7_ARATH1.3e-3153.91Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ... [more]
BLAST of Carg05981 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBL4|A0A0A0KBL4_CUCSA3.2e-6481.53Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1[more]
tr|A0A1S3B3I1|A0A1S3B3I1_CUCME2.1e-6380.25Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1[more]
tr|A0A2I4EQZ0|A0A2I4EQZ0_9ROSI3.7e-5270.70Protein yippee-like OS=Juglans regia OX=51240 GN=LOC108991873 PE=3 SV=1[more]
tr|V4SME6|V4SME6_9ROSI6.3e-5270.06Protein yippee-like OS=Citrus clementina OX=85681 GN=CICLE_v10033070mg PE=3 SV=1[more]
tr|A0A067FS54|A0A067FS54_CITSI6.3e-5270.06Protein yippee-like OS=Citrus sinensis OX=2711 GN=CISIN_1g032990mg PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR034751Yippee
IPR039058Yippee_fam
IPR004910Yippee/Mis18/Cereblon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05981-RACarg05981-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 13..116
e-value: 9.7E-12
score: 44.9
IPR039058Yippee familyPANTHERPTHR13848FAMILY NOT NAMEDcoord: 1..84
IPR039058Yippee familyPANTHERPTHR13848FAMILY NOT NAMEDcoord: 107..157
NoneNo IPR availablePANTHERPTHR13848:SF38PROTEIN YIPPEE-LIKEcoord: 1..84
NoneNo IPR availablePANTHERPTHR13848:SF38PROTEIN YIPPEE-LIKEcoord: 107..157
IPR034751Yippee domainPROSITEPS51792YIPPEEcoord: 12..132
score: 45.831

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05981Cla006583Watermelon (97103) v1carwmB0024
Carg05981Cla018116Watermelon (97103) v1carwmB0020
Carg05981Csa6G011570Cucumber (Chinese Long) v2carcuB0023
Carg05981MELO3C008289Melon (DHL92) v3.5.1carmeB0023
Carg05981ClCG04G007130Watermelon (Charleston Gray)carwcgB0025
Carg05981ClCG11G006240Watermelon (Charleston Gray)carwcgB0019
Carg05981CSPI04G15760Wild cucumber (PI 183967)carcpiB0021
Carg05981CSPI06G01610Wild cucumber (PI 183967)carcpiB0024
Carg05981Cucsa.067120Cucumber (Gy14) v1carcgyB0015
Carg05981Cucsa.136570Cucumber (Gy14) v1carcgyB0019
Carg05981CmaCh04G011230Cucurbita maxima (Rimu)carcmaB0034
Carg05981CmaCh15G001290Cucurbita maxima (Rimu)carcmaB0030
Carg05981CmaCh03G003590Cucurbita maxima (Rimu)carcmaB0031
Carg05981CmoCh15G001400Cucurbita moschata (Rifu)carcmoB0031
Carg05981CmoCh04G030330Cucurbita moschata (Rifu)carcmoB0033
Carg05981Lsi03G003140Bottle gourd (USVL1VR-Ls)carlsiB017
Carg05981Lsi01G015340Bottle gourd (USVL1VR-Ls)carlsiB016
Carg05981Cp4.1LG01g11180Cucurbita pepo (Zucchini)carcpeB0035
Carg05981Cp4.1LG01g21670Cucurbita pepo (Zucchini)carcpeB0034
Carg05981CsGy6G001690Cucumber (Gy14) v2carcgybB0023
Carg05981CsGy4G015080Cucumber (Gy14) v2carcgybB0020
Carg05981MELO3C008289.2Melon (DHL92) v3.6.1carmedB0024
Carg05981CsaV3_4G026110Cucumber (Chinese Long) v3carcucB0021
Carg05981CsaV3_6G001750Cucumber (Chinese Long) v3carcucB0024
Carg05981Cla97C11G213180Watermelon (97103) v2carwmbB0015
Carg05981Cla97C04G073750Watermelon (97103) v2carwmbB0021
Carg05981Cla97C07G132550Watermelon (97103) v2carwmbB0022
Carg05981Bhi04G001900Wax gourdcarwgoB0022
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05981Carg02120Silver-seed gourdcarcarB020
Carg05981Carg19991Silver-seed gourdcarcarB022
Carg05981Carg00227Silver-seed gourdcarcarB025
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05981Silver-seed gourdcarcarB023
Carg05981Cucurbita maxima (Rimu)carcmaB0033
Carg05981Cucurbita pepo (Zucchini)carcpeB0031