Carg05955 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGACCGTACTAGTTTCGCCATTATTTATCTTCCTGTTCATATTCTCTGTGAAATTTCTCAAGCTCAAAGCAAATTCTTGGATGCTGTTCAAAGATGGCCGATCAACTTGCTAAGGGTGAGGAATTCGAGAAGAAAGCGGTGAAGAAGCTTAATGGCTGGGGATTGTTCGGTTCCAAGTATGAAGATGCCGCTGATCTCTTCGATAAGGCTGCTAATTCTTACAAGCTTGCTAAATCATGTAATTCATCCAATCGGTCTCTGCTAGTACTTGCTTTTTTGGTCCCTTAGATCTTTGTACAATGCGATTGATTCAATTTTTCATGCCTCAATGCATTAACTTGGTCAGAACTTTATTGTCTGTTGCTTGAGTTAAAAGGAATTTATTGTCGATTGAATAGAGAGCTGTCTGCTGGTTATTTTGATTGGAATTCGACCTACGCAATTATTTTTGCTGAATTTAGAATCTGCTTTGATGATCTTGATAGCTGGTATGTACTGTTGTTTGAACTAAGAGCGTTAAGACTTACGATCTAATGGATGATTAAGATATTTTTGTGACATTATATGCATTTGGTTTTTGGTCGGTATATAGATGCAACTGCCCATCCAGATAGAAAATGTGAACGGTTGTCTACAAATGATAACTAAATACTGAATAAAAAGGTCTGGATGCGTTAGCTATCAAATTCCAATTTTGGATGATCTGTTTGGGAATCAGACACAACAACTGAAACTATATATCGAATGTGAAGGTCGTAGTTATAATTAAATGGTTTGGTTGGAAGATATATTGGCCATATGGACAAAAAATGTGAAGGAAATTGTTCTTAATATGATGGTTTAAAGCTCCATATGGATGCTGAGACTGTTTTAGGATTTTTCTTAATCTTTATAATGATTTTCCTGTTGACCCAGTAGAGGCTTACATATTCTTACTCCTTGAGGCCTCATTAATCAAGTCAGATCAACTTATCTTCACCATTTTGCTTTCGTACGAGATTATCAAAACAAGAAATGAGTTTCTTATTTTTCCTACATAGAAGCCTGCTGAGCCATCAAAGATCTTTTTTTTTTTTCTCGTTTGGGTTTTGAACTAGTTGATAAACATTACTCATTTTAATATATATTTGAATTTTCCTCTGTACAATTTCTTCTAATTCTATTTTAGTGACATCAGTCTCTTTGCCGTATACGTTCGAAAGAATCTCAAGATAGTTACGGTCTCGTATTTATGTAGTCCAATGATTTTTTTGTCATTCATAGTTACCATACCTCTTCTCACTATGATACCTGGTATATGGTTTTAATCTATACCCATTATGTGTTTTAGGGGATAAAGCTGGGTCAACATACACAAAGTTGGCAGGTTGCCATCTGAAAGTAAGTACTTCAAGTATGTGATAGTACCCACACCTCATGTCCTAACCTCCTCTGGCGTCTTTTTCAAAAATAATTTTCTGTAGGTGGAAAGTAAGCACGAAGCTGCTCAAGCTTATGTTGATGCTGCCAATGCCTATAAGAAAACATCTATAAAGGGTAAGTCCAATACTGCTCTTTAAATGGTTTATTAGTGGATTTCCTTTTAGTTTCCTTTCTCTGACAGAATATTCTTGTTCACAAATGATTCATTGTCTTCTAAAGTTTGTATTTTTCTTACTGATATTAATTCTCTTTGTTAGTCTAAGTTGCCAACTCAGTAGGATTCAGGAAAGAGCCTTCATGTTCTCCTCATATTTTCTATCTGCAATAATGTAAATCCGGATATATTACTGTTTCAGCTTAACTTGTTTAAATCATCTGTTATAATTCATCAGCATGTTGTTATATTGAACTTCTCTTTATCAAATTATGTATAGAAATCCGTTGAAGCTTTTATTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTACTGTAGAGGCCATTTCATGCATAGAGCAAGCAGTAAATCTATTTTGTGATATTGGAAGGCTCAGTATGGCTGCAAGATATTTGAAGGTACATGCTTATTTAGTTTGGCAGGATTGTTTGGTAAAGTTATTACTCAACAACGCCTTTGGCTTTCTTTGTATAGATTTGTTTTCTTTTGCTTCTTTTTCTTCATTAACTGTAATAGATTGTTCGAGTTGTAATTATCTTTAATGATGTAGGAAATTGCTGAACTATATGAGTCGGACCAGAACATTGAACTTGCTATTGGTTACTTCGAAAAAGCTGCTGACCTTTTCCAAAATGAGGAAGTAACAACATCTGCAAACCAGTGCAAGCAGAAAGTGGCTCAATTTGCTGCTCAATTAGAACAGTAAGCCTTTCAACTCATAGTATTGTTGTGCACTTCCCCTAATATATATTACTCATGAGTTGTCATTGATTGGTTAAGTTCTCAATAATGTTTTCATCTTTTTGACAATAATATAAGTGGCCATGAATATAAACGTTGTGATTGCACTCATGTTCAAGGAAAACTATATACATAATATCCTTGGTGTTTTTCTCCATAATATCTGTATTTCAGTGGGAAATTTATCTTTTATCAATTTATGTATGTAAGATTGCATACTTTAGAACGAAGAACTAAAAAGTTATATTTTTAGTATTCTCTCTTCACATTGCTAAAGAATGAGTTGTAGGGATTCATGTGAATTGTGGTCTTACTGGTGTAAATGTGATGTAGATTTTTGGCTTTGGATGTTATCTAAATCATGAAACCCGCTCATCATCAAACTGAAGTGGCATGCATTCTTATCCATATATGTTAACAAAACAACGAGAAAGGACATTGTCATTTTATCAATAGGAGACATTGTTGCCACTCCTTTGGTCTCCTTTTGTATTTGTACCTTTCATCTTATCAATATTTTTTTTAATAAAAAATATTAATGTACCATATCAATGCCTATTTTTAGAAAGGACATTGTCAAATACCCTCTGTTCCTACCTCTTGTATTGAAGCCAGATGACAACAGAGTATCTATTACTCAAATAGTGCACACGAATAGTTGTCTGCGGTCATGATGTTGCTTCTTCTATCTTAGTCGGAAGGTAATAGATAATCAATTTTGAATTTTCTATAGGTACGAAAAGGCAATTAAAATATATGAAGAGATTGCACGACATTCACTCAAAAGTAACTTGCTAAAATATGGAGTCAAAGGACATCTTCTTAATGCCGGTTTATGTCAACTCTGCAAAGGTGATATTGTAGCCATCACCAAAGCATTGGATGAATATCAGGTTCAGTTTTCAGCCTTGAATCTTGATGATATACGTGTACCTTATTTCTATTGTCTTACTCAAGTGTTCTGTATATTGTTTTACAGGATTTAGATCCAACTTTTTCGGGCACACGCGAATGTCGACTTTTAGCTGTAAGTTGTTTCAATCTTCAGTTGATGTTTTTATTCACCACGATATACATGACAGAGGCAGATTAGTTATTAATTATTACTTATCTCTTTTTCATTAGTTTGATTGCAAGTTCAGCTGCGTTAACGTTTCCACTTGGATTTTTATTCCATTCTTGCATTTGATGTGTGACTCTTCAGATTGCCAAGATTTTGCTTAGATACTTATTTACATTTTATATACATATGAATATGCATCCAGCATTCTCCTATCACTGTTTCTTTCCTTTTCTTTTCTTTCCTTTTGAACTTTTCAATATTGTGCTCTCTTGAGCTGAAAAGGTACTTCATTTGTCAGGATATTGCTGGTGCCATTGATGAAGAAGATGTTACAAAGTTTACTGACGTTGTTAAGGAGTTCGATAGCATGACCCCTCTGGTAATTCTTTCTGTAATTTTGAAGTGACGTTGCACTAAAAACTCTAAAGACAACCAATTTGATTGATAGACATGGTTTAGAGAGATCCTGATAATCACCGTGAGTTGACTTATTGGTCAAAAAGGGTCATATAAATAATAAGAGGCATTGGGAGAATTGGTTCAAGCCATATAGAATTTGTTCAAAAAGTATTTTTTTCATAAGTTATTCTAAACAAACAACTACTTTGTGTTTTGAATGTTTACTTATATGCTCAAATTGGTTTACCAGGACCCATGGAAGACAACTCTGCTGTTGAGAGTGAAGGAAAAGCTGAAAGCCAAGGAGCTTGAGGAGGATGACCTAACCTAAATCTCCTATTATAAATTGATTTGTTGGGTTACGGTTGTTGGTCGCTAAACCATATACGACGAGGTGTTTATATAAATTTTCACCACATTTGTAATGTCTGAGATTCAAAAACATTGCCTGCTTTGGGTTTCAATCAGATTGCATGCATGAGTTTGTGGAGTTTTACTATTTGAAACTGTGTTTTAGTTCCCCTTCGACTTTGCTTGAACGCCAATTTGAGAGACTGTTAAATTTACTAGGCCTCTCTTCACTGTGACCCAAAGAAAACTTTGTTCTTCAAACTTTTGGACAAGGACATGAGAAGGAAAGGGGTACAGATATTTTATTAGTACGTGTGATATTTATATTGAAAAGTACATGACTTGGTTGTTTCTCTCTCTTTTTT TTGACCGTACTAGTTTCGCCATTATTTATCTTCCTGTTCATATTCTCTGTGAAATTTCTCAAGCTCAAAGCAAATTCTTGGATGCTGTTCAAAGATGGCCGATCAACTTGCTAAGGGTGAGGAATTCGAGAAGAAAGCGGTGAAGAAGCTTAATGGCTGGGGATTGTTCGGTTCCAAGTATGAAGATGCCGCTGATCTCTTCGATAAGGCTGCTAATTCTTACAAGCTTGCTAAATCATGGGATAAAGCTGGGTCAACATACACAAAGTTGGCAGGTTGCCATCTGAAAGTGGAAAGTAAGCACGAAGCTGCTCAAGCTTATGTTGATGCTGCCAATGCCTATAAGAAAACATCTATAAAGGAGGCCATTTCATGCATAGAGCAAGCAGTAAATCTATTTTGTGATATTGGAAGGCTCAGTATGGCTGCAAGATATTTGAAGGAAATTGCTGAACTATATGAGTCGGACCAGAACATTGAACTTGCTATTGGTTACTTCGAAAAAGCTGCTGACCTTTTCCAAAATGAGGAAGTAACAACATCTGCAAACCAGTGCAAGCAGAAAGTGGCTCAATTTGCTGCTCAATTAGAACAGTACGAAAAGGCAATTAAAATATATGAAGAGATTGCACGACATTCACTCAAAAGTAACTTGCTAAAATATGGAGTCAAAGGACATCTTCTTAATGCCGGTTTATGTCAACTCTGCAAAGGTGATATTGTAGCCATCACCAAAGCATTGGATGAATATCAGGATTTAGATCCAACTTTTTCGGGCACACGCGAATGTCGACTTTTAGCTGATATTGCTGGTGCCATTGATGAAGAAGATGTTACAAAGTTTACTGACGTTGTTAAGGAGTTCGATAGCATGACCCCTCTGGACCCATGGAAGACAACTCTGCTGTTGAGAGTGAAGGAAAAGCTGAAAGCCAAGGAGCTTGAGGAGGATGACCTAACCTAAATCTCCTATTATAAATTGATTTGTTGGGTTACGGTTGTTGGTCGCTAAACCATATACGACGAGGTGTTTATATAAATTTTCACCACATTTGTAATGTCTGAGATTCAAAAACATTGCCTGCTTTGGGTTTCAATCAGATTGCATGCATGAGTTTGTGGAGTTTTACTATTTGAAACTGTGTTTTAGTTCCCCTTCGACTTTGCTTGAACGCCAATTTGAGAGACTGTTAAATTTACTAGGCCTCTCTTCACTGTGACCCAAAGAAAACTTTGTTCTTCAAACTTTTGGACAAGGACATGAGAAGGAAAGGGGTACAGATATTTTATTAGTACGTGTGATATTTATATTGAAAAGTACATGACTTGGTTGTTTCTCTCTCTTTTTT ATGGCCGATCAACTTGCTAAGGGTGAGGAATTCGAGAAGAAAGCGGTGAAGAAGCTTAATGGCTGGGGATTGTTCGGTTCCAAGTATGAAGATGCCGCTGATCTCTTCGATAAGGCTGCTAATTCTTACAAGCTTGCTAAATCATGGGATAAAGCTGGGTCAACATACACAAAGTTGGCAGGTTGCCATCTGAAAGTGGAAAGTAAGCACGAAGCTGCTCAAGCTTATGTTGATGCTGCCAATGCCTATAAGAAAACATCTATAAAGGAGGCCATTTCATGCATAGAGCAAGCAGTAAATCTATTTTGTGATATTGGAAGGCTCAGTATGGCTGCAAGATATTTGAAGGAAATTGCTGAACTATATGAGTCGGACCAGAACATTGAACTTGCTATTGGTTACTTCGAAAAAGCTGCTGACCTTTTCCAAAATGAGGAAGTAACAACATCTGCAAACCAGTGCAAGCAGAAAGTGGCTCAATTTGCTGCTCAATTAGAACAGTACGAAAAGGCAATTAAAATATATGAAGAGATTGCACGACATTCACTCAAAAGTAACTTGCTAAAATATGGAGTCAAAGGACATCTTCTTAATGCCGGTTTATGTCAACTCTGCAAAGGTGATATTGTAGCCATCACCAAAGCATTGGATGAATATCAGGATTTAGATCCAACTTTTTCGGGCACACGCGAATGTCGACTTTTAGCTGATATTGCTGGTGCCATTGATGAAGAAGATGTTACAAAGTTTACTGACGTTGTTAAGGAGTTCGATAGCATGACCCCTCTGGACCCATGGAAGACAACTCTGCTGTTGAGAGTGAAGGAAAAGCTGAAAGCCAAGGAGCTTGAGGAGGATGACCTAACCTAA MADQLAKGEEFEKKAVKKLNGWGLFGSKYEDAADLFDKAANSYKLAKSWDKAGSTYTKLAGCHLKVESKHEAAQAYVDAANAYKKTSIKEAISCIEQAVNLFCDIGRLSMAARYLKEIAELYESDQNIELAIGYFEKAADLFQNEEVTTSANQCKQKVAQFAAQLEQYEKAIKIYEEIARHSLKSNLLKYGVKGHLLNAGLCQLCKGDIVAITKALDEYQDLDPTFSGTRECRLLADIAGAIDEEDVTKFTDVVKEFDSMTPLDPWKTTLLLRVKEKLKAKELEEDDLT
BLAST of Carg05955 vs. NCBI nr
Match: XP_023515361.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.8 bits (1057), Expect = 2.0e-111 Identity = 285/289 (98.62%), Postives = 286/289 (98.96%), Query Frame = 0
BLAST of Carg05955 vs. NCBI nr
Match: XP_022991069.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita maxima]) HSP 1 Score: 409.8 bits (1052), Expect = 7.5e-111 Identity = 274/289 (94.81%), Postives = 275/289 (95.16%), Query Frame = 0
BLAST of Carg05955 vs. NCBI nr
Match: XP_022964687.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita moschata]) HSP 1 Score: 406.8 bits (1044), Expect = 6.3e-110 Identity = 284/289 (98.27%), Postives = 285/289 (98.62%), Query Frame = 0
BLAST of Carg05955 vs. NCBI nr
Match: XP_022939232.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita moschata] >XP_023551462.1 alpha-soluble NSF attachment protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 399.8 bits (1026), Expect = 7.7e-108 Identity = 280/289 (96.89%), Postives = 283/289 (97.92%), Query Frame = 0
BLAST of Carg05955 vs. NCBI nr
Match: XP_022134286.1 (alpha-soluble NSF attachment protein 2 [Momordica charantia]) HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106 Identity = 267/289 (92.39%), Postives = 269/289 (93.08%), Query Frame = 0
BLAST of Carg05955 vs. TAIR10
Match: AT3G56190.1 (alpha-soluble NSF attachment protein 2) HSP 1 Score: 253.4 bits (646), Expect = 1.6e-67 Identity = 196/289 (67.82%), Postives = 216/289 (74.74%), Query Frame = 0
BLAST of Carg05955 vs. TAIR10
Match: AT3G56450.1 (alpha-soluble NSF attachment protein 1) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45 Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0
BLAST of Carg05955 vs. Swiss-Prot
Match: sp|P93798|SNAA_VITVI (Alpha-soluble NSF attachment protein OS=Vitis vinifera OX=29760 PE=2 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 7.9e-88 Identity = 186/289 (64.36%), Postives = 208/289 (71.97%), Query Frame = 0
BLAST of Carg05955 vs. Swiss-Prot
Match: sp|Q9M5P8|SNAA_SOLTU (Alpha-soluble NSF attachment protein OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.5e-83 Identity = 207/289 (71.63%), Postives = 236/289 (81.66%), Query Frame = 0
BLAST of Carg05955 vs. Swiss-Prot
Match: sp|Q9SPE6|SNAA2_ARATH (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana OX=3702 GN=ASNAP2 PE=1 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.9e-66 Identity = 196/289 (67.82%), Postives = 216/289 (74.74%), Query Frame = 0
BLAST of Carg05955 vs. Swiss-Prot
Match: sp|Q9LXZ5|SNAA1_ARATH (Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana OX=3702 GN=ASNAP1 PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 3.2e-44 Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0
BLAST of Carg05955 vs. Swiss-Prot
Match: sp|Q54NP6|SNAA_DICDI (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum OX=44689 GN=snpA PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.8e-38 Identity = 79/189 (41.80%), Postives = 122/189 (64.55%), Query Frame = 0
BLAST of Carg05955 vs. TrEMBL
Match: tr|V7CZJ3|V7CZJ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G247900g PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.3e-98 Identity = 195/289 (67.47%), Postives = 211/289 (73.01%), Query Frame = 0
BLAST of Carg05955 vs. TrEMBL
Match: tr|A0A0L9TAK4|A0A0L9TAK4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan438s001300 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 4.8e-98 Identity = 211/289 (73.01%), Postives = 226/289 (78.20%), Query Frame = 0
BLAST of Carg05955 vs. TrEMBL
Match: tr|A0A0S3SH89|A0A0S3SH89_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G079000 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 4.8e-98 Identity = 211/289 (73.01%), Postives = 226/289 (78.20%), Query Frame = 0
BLAST of Carg05955 vs. TrEMBL
Match: tr|A0A2I4G522|A0A2I4G522_9ROSI (alpha-soluble NSF attachment protein 2 OS=Juglans regia OX=51240 GN=LOC109004758 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 6.3e-98 Identity = 238/289 (82.35%), Postives = 252/289 (87.20%), Query Frame = 0
BLAST of Carg05955 vs. TrEMBL
Match: tr|A0A1S3T9D5|A0A1S3T9D5_VIGRR (alpha-soluble NSF attachment protein 2-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106753112 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 6.3e-98 Identity = 211/289 (73.01%), Postives = 225/289 (77.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|