Carg05911 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05911
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein
Location	Cucurbita_argyrosperma_scaffold_026 : 228464 .. 230419 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATATTCATGGCGTCTGCTTCGTTTGCGAGCTCATTTTCGGTGTCAGCTCCTCCTTTCATCCAACTCCTCGCATTTTCAGGTTCTTTCCAATCCGAATCTGCAATCACTTCGCTATTTTTCTTCACTGCTTCATAAGTATTCTGTTCATGGCACGAGTATCGTTAATTCTAGATACAGAACGCCTCGAATGCTCTCGTACGAACCGGAGATTGGACAGAAGGACTCTGCTCACGCTGTTGTGTTTGATATTTTCTCTAAATGTCGGGATGTGGATGAAATTAGGAAAGGCTTAGAGTCGAGTGGTGTTGTTATTAGTCATGATTTGGTGTTGGAGGTGTTGGGGAAGCTTGAGTCGAACCCTGATGAGGCTATCAGGTTTTTCGGTTGGGTTTCGGGGGATTATGGCGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTTGGAATCCTAGGAGTTAATGGTCGTGTTGAGGAGTTTTGGGATTTGAACTGTGATATGAAGAAAAAGGGTTATGGGATATCTAAAAGTGTACAGAATAAGGTATTGGAGAAGTTTGAGAAGGATGGATTGGAGAGTGAAGCTGAGAAGTTGAGAGACGTCTTTGCATCAGGATCTATTGACAAGTCTCCCGAGAAGATTGGTTCAATCGTCTGCAAACTTGTTAGGAAGAATGTGTGGGGAGATGATGTTGAGCAGCAATTGCGTGATATGAACGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGTACAGAACCGGCAAAAGCATTTATATTTTTCCGGTGGATTGGTGAGAGTGGGATGTTTAAGCATGATGAACAGACTTATAATGCCATGGCAAGGGTGTTAGGAAGCGAAGATAGTATCGAGAGATTTTGGAAAGTAGTTGATGAAATGAGGAGCCATGGTTACGAAATGGAGGTGGAGACATTTTCTGAGGTGTTGAGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAACTTGTATGTGTTTGCAATGGCAGGAGGCAATAAGCCTTCGGTTGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTTAGTCTGTTCTCAAGGGCGTTGAAGATATTTACAGAGACAGGCAATGCATTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAACGAGGTTTTAAATGCAATGAAGGAGTATGGATACGTATTTAGTGGTGGGTTGAAGAGAAAGGTAGCATATCAACTTAGTAGTACTGGAAAAAGTGATGAAGCAAATGATTTCGTGAATAGCTTAGAAGCTTCTGGCTGTAATTCAGACAACAAGACCTGGGCAGCTTTGATTGAAGGTTATTGTGTTGCTGGAGATCTTGCTAAAGCTTCTGATTGCATCCACAAAATGGTTGAAAAAGGTGTGGACTGTTGTGCTGGATATACTTTGGATTTAGTGGTCAATGCTTACTGTCAAAAGAAACGCGAAACTGATGCTAGCCGTCTTTTCTGTGATCTCGTTGATGAAAAGCAGCTAAAACCATGGGATTCTACATATAAAGCATTGATAAACAAGCTATTGGTTCGAGGGGAATTCAGAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTTCCACCATTTATTGACCCATTTATTTTGTATGTATCAAAGTCTGGAACAGCTGATGATGCCATCGGCTTCCTGAAGGCCATGACATCGAAGAGTTTTCCTTCTACGACAGTGTTCCTCCATTTGTTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTCCTTTCAAAATGTCCAGGTTACATTCGTAACCATGCTGATGTTCTGGAGCTTTTTAATTCTATGAAGCATGTAGAAGCTGCTGCTCCTCCCCCAAATCTGGCTTCTTAG

mRNA sequence

ATGAGATATTCATGGCGTCTGCTTCGTTTGCGAGCTCATTTTCGGTGTCAGCTCCTCCTTTCATCCAACTCCTCGCATTTTCAGGTTCTTTCCAATCCGAATCTGCAATCACTTCGCTATTTTTCTTCACTGCTTCATAAGTATTCTGTTCATGGCACGAGTATCGTTAATTCTAGATACAGAACGCCTCGAATGCTCTCGTACGAACCGGAGATTGGACAGAAGGACTCTGCTCACGCTGTTGTGTTTGATATTTTCTCTAAATGTCGGGATGTGGATGAAATTAGGAAAGGCTTAGAGTCGAGTGGTGTTGTTATTAGTCATGATTTGGTGTTGGAGGTGTTGGGGAAGCTTGAGTCGAACCCTGATGAGGCTATCAGGTTTTTCGGTTGGGTTTCGGGGGATTATGGCGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTTGGAATCCTAGGAGTTAATGGTCGTGTTGAGGAGTTTTGGGATTTGAACTGTGATATGAAGAAAAAGGGTTATGGGATATCTAAAAGTGTACAGAATAAGGTATTGGAGAAGTTTGAGAAGGATGGATTGGAGAGTGAAGCTGAGAAGTTGAGAGACGTCTTTGCATCAGGATCTATTGACAAGTCTCCCGAGAAGATTGGTTCAATCGTCTGCAAACTTGTTAGGAAGAATGTGTGGGGAGATGATGTTGAGCAGCAATTGCGTGATATGAACGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGTACAGAACCGGCAAAAGCATTTATATTTTTCCGGTGGATTGGTGAGAGTGGGATGTTTAAGCATGATGAACAGACTTATAATGCCATGGCAAGGGTGTTAGGAAGCGAAGATAGTATCGAGAGATTTTGGAAAGTAGTTGATGAAATGAGGAGCCATGGTTACGAAATGGAGGTGGAGACATTTTCTGAGGTGTTGAGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAACTTGTATGTGTTTGCAATGGCAGGAGGCAATAAGCCTTCGGTTGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTTAGTCTGTTCTCAAGGGCGTTGAAGATATTTACAGAGACAGGCAATGCATTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAACGAGGTTTTAAATGCAATGAAGGAGTATGGATACGTATTTAGTGGTGGGTTGAAGAGAAAGGTAGCATATCAACTTAGTAGTACTGGAAAAAGTGATGAAGCAAATGATTTCGTGAATAGCTTAGAAGCTTCTGGCTGTAATTCAGACAACAAGACCTGGGCAGCTTTGATTGAAGGTTATTGTGTTGCTGGAGATCTTGCTAAAGCTTCTGATTGCATCCACAAAATGGTTGAAAAAGGTGTGGACTGTTGTGCTGGATATACTTTGGATTTAGTGGTCAATGCTTACTGTCAAAAGAAACGCGAAACTGATGCTAGCCGTCTTTTCTGTGATCTCGTTGATGAAAAGCAGCTAAAACCATGGGATTCTACATATAAAGCATTGATAAACAAGCTATTGGTTCGAGGGGAATTCAGAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTTCCACCATTTATTGACCCATTTATTTTGTATGTATCAAAGTCTGGAACAGCTGATGATGCCATCGGCTTCCTGAAGGCCATGACATCGAAGAGTTTTCCTTCTACGACAGTGTTCCTCCATTTGTTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTCCTTTCAAAATGTCCAGGTTACATTCGTAACCATGCTGATGTTCTGGAGCTTTTTAATTCTATGAAGCATGTAGAAGCTGCTGCTCCTCCCCCAAATCTGGCTTCTTAG

Coding sequence (CDS)

ATGAGATATTCATGGCGTCTGCTTCGTTTGCGAGCTCATTTTCGGTGTCAGCTCCTCCTTTCATCCAACTCCTCGCATTTTCAGGTTCTTTCCAATCCGAATCTGCAATCACTTCGCTATTTTTCTTCACTGCTTCATAAGTATTCTGTTCATGGCACGAGTATCGTTAATTCTAGATACAGAACGCCTCGAATGCTCTCGTACGAACCGGAGATTGGACAGAAGGACTCTGCTCACGCTGTTGTGTTTGATATTTTCTCTAAATGTCGGGATGTGGATGAAATTAGGAAAGGCTTAGAGTCGAGTGGTGTTGTTATTAGTCATGATTTGGTGTTGGAGGTGTTGGGGAAGCTTGAGTCGAACCCTGATGAGGCTATCAGGTTTTTCGGTTGGGTTTCGGGGGATTATGGCGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTTGGAATCCTAGGAGTTAATGGTCGTGTTGAGGAGTTTTGGGATTTGAACTGTGATATGAAGAAAAAGGGTTATGGGATATCTAAAAGTGTACAGAATAAGGTATTGGAGAAGTTTGAGAAGGATGGATTGGAGAGTGAAGCTGAGAAGTTGAGAGACGTCTTTGCATCAGGATCTATTGACAAGTCTCCCGAGAAGATTGGTTCAATCGTCTGCAAACTTGTTAGGAAGAATGTGTGGGGAGATGATGTTGAGCAGCAATTGCGTGATATGAACGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGTACAGAACCGGCAAAAGCATTTATATTTTTCCGGTGGATTGGTGAGAGTGGGATGTTTAAGCATGATGAACAGACTTATAATGCCATGGCAAGGGTGTTAGGAAGCGAAGATAGTATCGAGAGATTTTGGAAAGTAGTTGATGAAATGAGGAGCCATGGTTACGAAATGGAGGTGGAGACATTTTCTGAGGTGTTGAGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAACTTGTATGTGTTTGCAATGGCAGGAGGCAATAAGCCTTCGGTTGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTTAGTCTGTTCTCAAGGGCGTTGAAGATATTTACAGAGACAGGCAATGCATTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAACGAGGTTTTAAATGCAATGAAGGAGTATGGATACGTATTTAGTGGTGGGTTGAAGAGAAAGGTAGCATATCAACTTAGTAGTACTGGAAAAAGTGATGAAGCAAATGATTTCGTGAATAGCTTAGAAGCTTCTGGCTGTAATTCAGACAACAAGACCTGGGCAGCTTTGATTGAAGGTTATTGTGTTGCTGGAGATCTTGCTAAAGCTTCTGATTGCATCCACAAAATGGTTGAAAAAGGTGTGGACTGTTGTGCTGGATATACTTTGGATTTAGTGGTCAATGCTTACTGTCAAAAGAAACGCGAAACTGATGCTAGCCGTCTTTTCTGTGATCTCGTTGATGAAAAGCAGCTAAAACCATGGGATTCTACATATAAAGCATTGATAAACAAGCTATTGGTTCGAGGGGAATTCAGAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTTCCACCATTTATTGACCCATTTATTTTGTATGTATCAAAGTCTGGAACAGCTGATGATGCCATCGGCTTCCTGAAGGCCATGACATCGAAGAGTTTTCCTTCTACGACAGTGTTCCTCCATTTGTTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTCCTTTCAAAATGTCCAGGTTACATTCGTAACCATGCTGATGTTCTGGAGCTTTTTAATTCTATGAAGCATGTAGAAGCTGCTGCTCCTCCCCCAAATCTGGCTTCTTAG

Protein sequence

MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS

Homology

[Close]

BLAST of Carg05911 vs. NCBI nr
Match: XP_022921370.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 640/651 (98.31%), Postives = 643/651 (98.77%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRY 60
           MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLL KY VH TSIVNSRY
Sbjct: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLRKYPVHDTSIVNSRY 60

Query: 61  RTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
            TPRMLS EPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES
Sbjct: 61  STPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120

Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
           NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180

Query: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
           NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240

Query: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWK 300
           +S SSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLG EDSI+RFWK
Sbjct: 241 ISLSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGREDSIDRFWK 300

Query: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
           VVDEMRSHGYEMEVETFSEVLRRFCKR+MIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRKMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360

Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
           VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420

Query: 421 GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
           GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480

Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLV 540
           KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW STYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540

Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
           RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600

Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 652
           FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 651

[Close]

BLAST of Carg05911 vs. NCBI nr
Match: XP_023511958.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 637/651 (97.85%), Postives = 644/651 (98.92%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRY 60
           MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKY VH TSIVN RY
Sbjct: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60

Query: 61  RTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
           RTPRMLSYE EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61  RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120

Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
           NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180

Query: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
           +KVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240

Query: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWK 300
           +SFSSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLG EDSI+RFWK
Sbjct: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300

Query: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
           VVDEMRSHGYE+EVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360

Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
           VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420

Query: 421 GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
           GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480

Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLV 540
           KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW STYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540

Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
           RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600

Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 652
           FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651

[Close]

BLAST of Carg05911 vs. NCBI nr
Match: XP_022990729.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 619/651 (95.08%), Postives = 628/651 (96.47%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRY 60
           MRYSW LL LRAHFRCQLLLSSNSSHFQVLSNPNL SLRYF SLLHKY VH TSIVNSRY
Sbjct: 1   MRYSWSLLGLRAHFRCQLLLSSNSSHFQVLSNPNLPSLRYF-SLLHKYPVHDTSIVNSRY 60

Query: 61  RTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
            TPRMLS EPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES
Sbjct: 61  CTPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120

Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
           NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD+KKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDIKKKGYGISKSVQ 180

Query: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
           NKVLEKFEKDGLESEAE+LRDVFASGSIDKSPEK+GS+VCKLVRKNVWG+DVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAERLRDVFASGSIDKSPEKMGSVVCKLVRKNVWGNDVEQQLRDMN 240

Query: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWK 300
           VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYN MARVLG EDSI+RFWK
Sbjct: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNGMARVLGREDSIDRFWK 300

Query: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
           VVDEMRSHGYEMEVETFSEVLRRFC RRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKI 
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCARRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIT 360

Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
           VSKHLDLS+FSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSMFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420

Query: 421 GGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
           GGLKRK   XXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKXXXXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480

Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLV 540
           KM EKGVDCCAGY LDLVVNAYCQKKRETD SRL CDLVDEKQLKPW STYK LINKLLV
Sbjct: 481 KMFEKGVDCCAGYALDLVVNAYCQKKRETDGSRLLCDLVDEKQLKPWHSTYKELINKLLV 540

Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
           RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600

Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 652
           FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNS + VEAA+PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSTRLVEAASPPPNLAS 650

[Close]

BLAST of Carg05911 vs. NCBI nr
Match: XP_022921377.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 580/587 (98.81%), Postives = 583/587 (99.32%), Query Frame = 0


Query: 65  MLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 124
           MLS EPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE
Sbjct: 1   MLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 60

Query: 125 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVL 184
           AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVL
Sbjct: 61  AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVL 120

Query: 185 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNVSFS 244
           EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN+S S
Sbjct: 121 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNISLS 180

Query: 245 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDE 304
           SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLG EDSI+RFWKVVDE
Sbjct: 181 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGREDSIDRFWKVVDE 240

Query: 305 MRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 364
           MRSHGYEMEVETFSEVLRRFCKR+MIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH
Sbjct: 241 MRSHGYEMEVETFSEVLRRFCKRKMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 300

Query: 365 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 424
           LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK
Sbjct: 301 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 360

Query: 425 RKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 484
           RKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE
Sbjct: 361 RKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 420

Query: 485 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLVRGEF 544
           KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW STYKALINKLLVRGEF
Sbjct: 421 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEF 480

Query: 545 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 604
           REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF
Sbjct: 481 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 540

Query: 605 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 652
           FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS
Sbjct: 541 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 587

[Close]

BLAST of Carg05911 vs. NCBI nr
Match: XP_022990730.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 562/587 (95.74%), Postives = 571/587 (97.27%), Query Frame = 0


Query: 65  MLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 124
           MLS EPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE
Sbjct: 1   MLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 60

Query: 125 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVL 184
           AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD+KKKGYGISKSVQNKVL
Sbjct: 61  AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDIKKKGYGISKSVQNKVL 120

Query: 185 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNVSFS 244
           EKFEKDGLESEAE+LRDVFASGSIDKSPEK+GS+VCKLVRKNVWG+DVEQQLRDMNVSFS
Sbjct: 121 EKFEKDGLESEAERLRDVFASGSIDKSPEKMGSVVCKLVRKNVWGNDVEQQLRDMNVSFS 180

Query: 245 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDE 304
           SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYN MARVLG EDSI+RFWKVVDE
Sbjct: 181 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNGMARVLGREDSIDRFWKVVDE 240

Query: 305 MRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 364
           MRSHGYEMEVETFSEVLRRFC RRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKI VSKH
Sbjct: 241 MRSHGYEMEVETFSEVLRRFCARRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKITVSKH 300

Query: 365 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 424
           LDLS+FSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK
Sbjct: 301 LDLSMFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 360

Query: 425 RKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 484
           RK   XXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKM E
Sbjct: 361 RKXXXXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMFE 420

Query: 485 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLVRGEF 544
           KGVDCCAGY LDLVVNAYCQKKRETD SRL CDLVDEKQLKPW STYK LINKLLVRGEF
Sbjct: 421 KGVDCCAGYALDLVVNAYCQKKRETDGSRLLCDLVDEKQLKPWHSTYKELINKLLVRGEF 480

Query: 545 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 604
           REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF
Sbjct: 481 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 540

Query: 605 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 652
           FQAGRHGDAQDFLSKCPGYIRNHADVLELFNS + VEAA+PPPNLAS
Sbjct: 541 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSTRLVEAASPPPNLAS 587

[Close]

BLAST of Carg05911 vs. TAIR10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 598.6 bits (1542), Expect = 4.6e-171
Identity = 328/661 (49.62%), Postives = 431/661 (65.20%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYSVHGTSIVNSR 60
           MRY WR L  R++        S+ S FQV+SN    S R FSS LH ++ V     + + 
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSFLHERFGVQQRQCLFA- 60

Query: 61  YRTP------RMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLE 120
            R+P      R  S E  I +K  A  VV D+FS+    DEI K L+S+ VVISH+L L 
Sbjct: 61  LRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALR 120

Query: 121 VLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGY 180
           VL +LES+PD A RFF W    Y +KLSSKSYN ML I GVNG V+EFW L  DMKKKG+
Sbjct: 121 VLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGH 180

Query: 181 GISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVE 240
           G+S +V+++V +KF+KDGLE++ E+L+++FASGS+D S          +V K VWG DVE
Sbjct: 181 GVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSXXXXXXXXXXIVMKEVWGADVE 240

Query: 241 QQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSED 300
           +QLRD+ + F SD+VKM+LE L  +P KA +FFRWI ESG FKHDE+TYNAMARVLG E 
Sbjct: 241 KQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEK 300

Query: 301 SIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG--GNKPSVDC 360
            ++RF  +++E+RS GYEME+ET+  V  RFC+ +MI+EAV L+ FAMAG   N P+  C
Sbjct: 301 FLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHC 360

Query: 361 LTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNA 420
            + LLKKI  +K LD+ LF+R LK +T  GN + D M+  VLKSL +V R G+ NEVL A
Sbjct: 361 CSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKA 420

Query: 421 MKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGD 480
           M E GYV SG L+  +A                  +EASG + D+K  A+L+EG+C A D
Sbjct: 421 MNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKD 480

Query: 481 LAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTY 540
           L +AS+C  KM+ K     AGY  + +V AYC   +  D  +LF +LV + QLKPW STY
Sbjct: 481 LEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTY 540

Query: 541 KALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAM 600
           K ++  LL++     G F EAL LL MMRNH FPPF+DPF+ Y+S SGT+ +A  FLKA+
Sbjct: 541 KIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAV 600

Query: 601 TSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPP 648
           TSK FPS ++ L +FEA  ++ RH +AQD LS  P YIR +A+VLELFN+MK  + +   
Sbjct: 601 TSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKPEKCSLEK 656

[Close]

BLAST of Carg05911 vs. TAIR10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 596.7 bits (1537), Expect = 1.8e-170
Identity = 330/668 (49.40%), Postives = 433/668 (64.82%), Query Frame = 0


Query: 1   MRY-SWRLLRLRAHFR--------CQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVH 60
           MRY  WRL+ LR++ R        C  + S +S  F    +P + +L+    L    S  
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLRSPM 60

Query: 61  GTSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLV 120
            TS  N      R  S EP + +K SA A V DIFS+    DEIRK LESSGVVIS DL 
Sbjct: 61  -TSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLA 120

Query: 121 LEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKK 180
           L+VL KLESNPD A  FF W+     E+LSSK+YN+ML ILG NG V+EFW L   MKKK
Sbjct: 121 LKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKK 180

Query: 181 GYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDD 240
           G+G+S +V++KV +KF+KDGLES+  +LR +F S  +D S E +   VCK+V K  WGDD
Sbjct: 181 GHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDD 240

Query: 241 VEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGS 300
           VE+++RD+NV F SD+VKMI+E L  EP KA +FFRWI ES +FKHDE+TYNAMARVLG 
Sbjct: 241 VEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGK 300

Query: 301 EDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG---GNKPS 360
           E  ++RF  +V EMRS GYE+E+ET+  V  RFC+ ++I+EAV+L+  AMAG    N P+
Sbjct: 301 EKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPT 360

Query: 361 VDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEV 420
             C   LLKKI  +K LD+ LFSRA+K++T+ GNALTDS++ +VLKSL +V R+ + NE+
Sbjct: 361 PHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNEL 420

Query: 421 LNAMKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCV 480
           L  MK  GYV SG ++  +A                  +E+SG N D+K  A+L+EGYC 
Sbjct: 421 LKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCD 480

Query: 481 AGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWD 540
           +G+L +A  C  KMV       A Y+ + +V AYC K +  DA +L    V + QLKP  
Sbjct: 481 SGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRH 540

Query: 541 STYKALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFL 600
           STYK+L+  LL +     G F EAL LL +M++H FPPFIDPF+ Y S +G + +A+GFL
Sbjct: 541 STYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFL 600

Query: 601 KAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA 652
           KAMTS +FP  +V L +FE   ++ RH +AQD LS CP YIRN+ DVLELFN+MK  E+A
Sbjct: 601 KAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 660

[Close]

BLAST of Carg05911 vs. TAIR10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-48
Identity = 103/323 (31.89%), Postives = 177/323 (54.80%), Query Frame = 0


Query: 94  EIRKGLESSGVVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILG 153
           E+ +GL    + ++H+  + VL KLE  P++A  F  WV  D G   S+  Y++ML IL 
Sbjct: 75  EVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILV 134

Query: 154 VNGRVEEFWDLNCDMKKKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPE 213
               ++ FW    +MK+ G+ + +     +  +  K+  +++A  +   +     + +  
Sbjct: 135 QQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMS 194

Query: 214 KIGSIVCKLVRKNVWGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESG 273
            +   V  +V K  W  +VE++L++M +  S + V  +L+ L   P KA  FF W+G  G
Sbjct: 195 VVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGG 254

Query: 274 M---FKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMI 333
               ++H   TYNA  RVL   +S+  FW VVDEM++ GY+M+++T+ +V R+F K RM+
Sbjct: 255 SSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMM 314

Query: 334 EEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVF 393
            E V LY + M G  KPS+   + LL+ ++ S + DL L  R  + +  TG +L+ ++  
Sbjct: 315 AETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374

Query: 394 AVLKSLSTVGRIGEYNEVLNAMK 414
            + +SL++VGR  E  E+  AM+
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMR 397

[Close]

BLAST of Carg05911 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 8.3e-11
Identity = 60/255 (23.53%), Postives = 108/255 (42.35%), Query Frame = 0


Query: 91  DVDEIRKGLESSGVVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLG 150
           D  E+R  LE   V  S++LV+E+L ++ ++ + A  FF W     G   S + Y+ M+ 
Sbjct: 110 DRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMIS 169

Query: 151 ILGVNGRVEEFWDLNCDMKKKGYGISKSVQNK-----VLEKFEKDGLESEAEKLRDVFAS 210
           ILG   + +  W L  +M+K     S S+ N      ++ K+       +A      +  
Sbjct: 170 ILGKMRKFDTAWTLIDEMRK----FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 229

Query: 211 GSIDKSPEKIGSIVCKLVR-KNVWGDDVEQQLRDMNVSFSSDMVKMILENLCT---EPAK 270
             ++   +   S++  L R KNV               F +    ++L   C     P +
Sbjct: 230 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPRE 289

Query: 271 AFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVL 330
           A   +  +G  G+ KHD  +Y++M        S+ +  K+ D M+    E + + ++ V+
Sbjct: 290 AERVWMEMGNVGV-KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 349

Query: 331 RRFCKRRMIEEAVNL 337
               K   + EA NL
Sbjct: 350 HALAKASFVSEARNL 359

[Close]

BLAST of Carg05911 vs. TAIR10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-09
Identity = 59/239 (24.69%), Postives = 102/239 (42.68%), Query Frame = 0


Query: 94  EIRKGLESSGVVISHDLVLEVLGKL---ESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLG 153
           E+++ L SSG+ +S DL+  VL ++     NP + + F+ + S   G   SS S + ML 
Sbjct: 57  ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116

Query: 154 ILGVNGRVEEFWDLNCDMKKKGYG-ISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSID 213
           ILG N + ++ W+L  + K+K    IS      VL +  K                    
Sbjct: 117 ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK-------------------- 176

Query: 214 KSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWI 273
                    +C  VR+ V  +   +  R +   F +     +L  LC E +       + 
Sbjct: 177 ---------LCS-VRQTV--ESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYH 236

Query: 274 GESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRR 329
                F+ D QT+N +     S +  E F+   +EM+  G + +V T++ ++  +CK R
Sbjct: 237 SLKHQFQPDLQTFNILLSGWKSSEEAEAFF---EEMKGKGLKPDVVTYNSLIDVYCKDR 260

[Close]

BLAST of Carg05911 vs. Swiss-Prot
Match: sp|Q9M891|PP208_ARATH (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 8.4e-170
Identity = 328/661 (49.62%), Postives = 431/661 (65.20%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYSVHGTSIVNSR 60
           MRY WR L  R++        S+ S FQV+SN    S R FSS LH ++ V     + + 
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSFLHERFGVQQRQCLFA- 60

Query: 61  YRTP------RMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLE 120
            R+P      R  S E  I +K  A  VV D+FS+    DEI K L+S+ VVISH+L L 
Sbjct: 61  LRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALR 120

Query: 121 VLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGY 180
           VL +LES+PD A RFF W    Y +KLSSKSYN ML I GVNG V+EFW L  DMKKKG+
Sbjct: 121 VLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGH 180

Query: 181 GISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVE 240
           G+S +V+++V +KF+KDGLE++ E+L+++FASGS+D S          +V K VWG DVE
Sbjct: 181 GVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSXXXXXXXXXXIVMKEVWGADVE 240

Query: 241 QQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSED 300
           +QLRD+ + F SD+VKM+LE L  +P KA +FFRWI ESG FKHDE+TYNAMARVLG E 
Sbjct: 241 KQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEK 300

Query: 301 SIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG--GNKPSVDC 360
            ++RF  +++E+RS GYEME+ET+  V  RFC+ +MI+EAV L+ FAMAG   N P+  C
Sbjct: 301 FLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHC 360

Query: 361 LTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNA 420
            + LLKKI  +K LD+ LF+R LK +T  GN + D M+  VLKSL +V R G+ NEVL A
Sbjct: 361 CSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKA 420

Query: 421 MKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGD 480
           M E GYV SG L+  +A                  +EASG + D+K  A+L+EG+C A D
Sbjct: 421 MNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKD 480

Query: 481 LAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTY 540
           L +AS+C  KM+ K     AGY  + +V AYC   +  D  +LF +LV + QLKPW STY
Sbjct: 481 LEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTY 540

Query: 541 KALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAM 600
           K ++  LL++     G F EAL LL MMRNH FPPF+DPF+ Y+S SGT+ +A  FLKA+
Sbjct: 541 KIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAV 600

Query: 601 TSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPP 648
           TSK FPS ++ L +FEA  ++ RH +AQD LS  P YIR +A+VLELFN+MK  + +   
Sbjct: 601 TSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKPEKCSLEK 656

[Close]

BLAST of Carg05911 vs. Swiss-Prot
Match: sp|Q8LPF1|PP387_ARATH (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 3.2e-169
Identity = 330/668 (49.40%), Postives = 433/668 (64.82%), Query Frame = 0


Query: 1   MRY-SWRLLRLRAHFR--------CQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVH 60
           MRY  WRL+ LR++ R        C  + S +S  F    +P + +L+    L    S  
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLRSPM 60

Query: 61  GTSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLV 120
            TS  N      R  S EP + +K SA A V DIFS+    DEIRK LESSGVVIS DL 
Sbjct: 61  -TSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLA 120

Query: 121 LEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKK 180
           L+VL KLESNPD A  FF W+     E+LSSK+YN+ML ILG NG V+EFW L   MKKK
Sbjct: 121 LKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKK 180

Query: 181 GYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDD 240
           G+G+S +V++KV +KF+KDGLES+  +LR +F S  +D S E +   VCK+V K  WGDD
Sbjct: 181 GHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDD 240

Query: 241 VEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGS 300
           VE+++RD+NV F SD+VKMI+E L  EP KA +FFRWI ES +FKHDE+TYNAMARVLG 
Sbjct: 241 VEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGK 300

Query: 301 EDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG---GNKPS 360
           E  ++RF  +V EMRS GYE+E+ET+  V  RFC+ ++I+EAV+L+  AMAG    N P+
Sbjct: 301 EKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPT 360

Query: 361 VDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEV 420
             C   LLKKI  +K LD+ LFSRA+K++T+ GNALTDS++ +VLKSL +V R+ + NE+
Sbjct: 361 PHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNEL 420

Query: 421 LNAMKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCV 480
           L  MK  GYV SG ++  +A                  +E+SG N D+K  A+L+EGYC 
Sbjct: 421 LKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCD 480

Query: 481 AGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWD 540
           +G+L +A  C  KMV       A Y+ + +V AYC K +  DA +L    V + QLKP  
Sbjct: 481 SGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRH 540

Query: 541 STYKALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFL 600
           STYK+L+  LL +     G F EAL LL +M++H FPPFIDPF+ Y S +G + +A+GFL
Sbjct: 541 STYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFL 600

Query: 601 KAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA 652
           KAMTS +FP  +V L +FE   ++ RH +AQD LS CP YIRN+ DVLELFN+MK  E+A
Sbjct: 601 KAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 660

[Close]

BLAST of Carg05911 vs. Swiss-Prot
Match: sp|Q9STK5|PP269_ARATH (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.0e-47
Identity = 103/323 (31.89%), Postives = 177/323 (54.80%), Query Frame = 0


Query: 94  EIRKGLESSGVVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILG 153
           E+ +GL    + ++H+  + VL KLE  P++A  F  WV  D G   S+  Y++ML IL 
Sbjct: 75  EVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILV 134

Query: 154 VNGRVEEFWDLNCDMKKKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPE 213
               ++ FW    +MK+ G+ + +     +  +  K+  +++A  +   +     + +  
Sbjct: 135 QQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMS 194

Query: 214 KIGSIVCKLVRKNVWGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESG 273
            +   V  +V K  W  +VE++L++M +  S + V  +L+ L   P KA  FF W+G  G
Sbjct: 195 VVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGG 254

Query: 274 M---FKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMI 333
               ++H   TYNA  RVL   +S+  FW VVDEM++ GY+M+++T+ +V R+F K RM+
Sbjct: 255 SSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMM 314

Query: 334 EEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVF 393
            E V LY + M G  KPS+   + LL+ ++ S + DL L  R  + +  TG +L+ ++  
Sbjct: 315 AETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374

Query: 394 AVLKSLSTVGRIGEYNEVLNAMK 414
            + +SL++VGR  E  E+  AM+
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMR 397

[Close]

BLAST of Carg05911 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-09
Identity = 60/255 (23.53%), Postives = 108/255 (42.35%), Query Frame = 0


Query: 91  DVDEIRKGLESSGVVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLG 150
           D  E+R  LE   V  S++LV+E+L ++ ++ + A  FF W     G   S + Y+ M+ 
Sbjct: 110 DRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMIS 169

Query: 151 ILGVNGRVEEFWDLNCDMKKKGYGISKSVQNK-----VLEKFEKDGLESEAEKLRDVFAS 210
           ILG   + +  W L  +M+K     S S+ N      ++ K+       +A      +  
Sbjct: 170 ILGKMRKFDTAWTLIDEMRK----FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR 229

Query: 211 GSIDKSPEKIGSIVCKLVR-KNVWGDDVEQQLRDMNVSFSSDMVKMILENLCT---EPAK 270
             ++   +   S++  L R KNV               F +    ++L   C     P +
Sbjct: 230 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPRE 289

Query: 271 AFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVL 330
           A   +  +G  G+ KHD  +Y++M        S+ +  K+ D M+    E + + ++ V+
Sbjct: 290 AERVWMEMGNVGV-KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 349

Query: 331 RRFCKRRMIEEAVNL 337
               K   + EA NL
Sbjct: 350 HALAKASFVSEARNL 359

[Close]

BLAST of Carg05911 vs. Swiss-Prot
Match: sp|Q9FZ19|PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 6.3e-08
Identity = 59/239 (24.69%), Postives = 102/239 (42.68%), Query Frame = 0


Query: 94  EIRKGLESSGVVISHDLVLEVLGKL---ESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLG 153
           E+++ L SSG+ +S DL+  VL ++     NP + + F+ + S   G   SS S + ML 
Sbjct: 57  ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116

Query: 154 ILGVNGRVEEFWDLNCDMKKKGYG-ISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSID 213
           ILG N + ++ W+L  + K+K    IS      VL +  K                    
Sbjct: 117 ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK-------------------- 176

Query: 214 KSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWI 273
                    +C  VR+ V  +   +  R +   F +     +L  LC E +       + 
Sbjct: 177 ---------LCS-VRQTV--ESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYH 236

Query: 274 GESGMFKHDEQTYNAMARVLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRR 329
                F+ D QT+N +     S +  E F+   +EM+  G + +V T++ ++  +CK R
Sbjct: 237 SLKHQFQPDLQTFNILLSGWKSSEEAEAFF---EEMKGKGLKPDVVTYNSLIDVYCKDR 260

[Close]

BLAST of Carg05911 vs. TrEMBL
Match: tr|A0A1S3C9Q1|A0A1S3C9Q1_CUCME (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103498583 PE=4 SV=1)

HSP 1 Score: 977.2 bits (2525), Expect = 1.8e-281
Identity = 504/662 (76.13%), Postives = 553/662 (83.53%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHG-------- 60
           MRYSWRLLRLR HFR    +SSNSSH QVLS+PNLQSLR  SSL  K+ VH         
Sbjct: 1   MRYSWRLLRLRPHFRSHFRISSNSSHCQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  ---TSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHD 120
              TSIV   Y T R  S EP   +++S HAV+ DIFSK RDVDEIRKGLES+GVVISHD
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEP-AAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHD 120

Query: 121 LVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMK 180
           LVLEVLG+LESNPD AIRFF WVSGDYGEKLSSKS+N MLGILGVNG V+EFWDLNCDMK
Sbjct: 121 LVLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNSMLGILGVNGFVKEFWDLNCDMK 180

Query: 181 KKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWG 240
           KKGYGISK+V++KVLEKF+KDGL+S+AEKLRDVFASGS+DKSPEKIGS V +LVRKN+WG
Sbjct: 181 KKGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWG 240

Query: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILE+L T+PAKA+IFF WIGESGMFKHDEQTYNAMARVL
Sbjct: 241 EDVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSV 360
           G ED I+RFWKVVDEM+S GY+ME+ETF++VL RFCKRRMIEEAVNLYVFAM  GNKPS 
Sbjct: 301 GREDCIDRFWKVVDEMKSQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSE 360

Query: 361 DCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVS+H DL LFSRALKIF+E+GN L DSMVFAVLKSLS+VGR GE+NEVL
Sbjct: 361 DCLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVL 420

Query: 421 NAMKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVA 480
           N M EYGYVFSGGLKRK+AY                 LEASGCN DNKTWA+LIEG+C A
Sbjct: 421 NVMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAA 480

Query: 481 GDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDS 540
           GDL KASDCIHKMVEKG    A Y LDL+VN YC+KKRETDAS L  DLVD+ QLKP  S
Sbjct: 481 GDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHS 540

Query: 541 TYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSK 600
           TYK LINKLL+ GEF++ALKLLG+MRNHEFPPFI+PFI YVSKSGTADDA+ FLK MTSK
Sbjct: 541 TYKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSK 600

Query: 601 SFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNL 652
            FPSTTV L LFEAFFQAGRHGDAQD LS CP YIRNHADVL+LF SMK VEAA    NL
Sbjct: 601 KFPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAV-SANL 660

[Close]

BLAST of Carg05911 vs. TrEMBL
Match: tr|A0A0A0KSL3|A0A0A0KSL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 2.5e-256
Identity = 485/662 (73.26%), Postives = 538/662 (81.27%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHG-------- 60
           MR+SWRLLRLR H R    +SSNSSHFQVLS+PNLQSLR  SSL  K+ +H         
Sbjct: 1   MRFSWRLLRLRPHLR----ISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60

Query: 61  ---TSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHD 120
              TSIV   Y T R  S EP   +++S HAV+ DI SK RDVDEIRKGLES+GVVISHD
Sbjct: 61  FYFTSIVRPIYGTLRTFSSEP-AAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHD 120

Query: 121 LVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMK 180
           LVLEVLG+LESNPD+AIRFF WVSGDYGEKLSSKS+NLMLGILGVNG V++FWDLNCDMK
Sbjct: 121 LVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMK 180

Query: 181 KKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWG 240
           KKGYG+SK+V++KVLEKF+KDGL+SEAEKLRD+FASGS DKSP+ IGS V +L+R N+WG
Sbjct: 181 KKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWG 240

Query: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILE+L T+PAKA+IFF WI ESGMFKHDEQTYNAMA VL
Sbjct: 241 EDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVL 300

Query: 301 GSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSV 360
           G ED I+RFWKVVDEMRS GY+ME+ETF++VL RFCKRRMIEEAVNLYVFAM+ G+KPS 
Sbjct: 301 GREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSE 360

Query: 361 DCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVS+  DL LFSRALKIF+E+GN L DSMVFAVL+SLS+VGR GE     
Sbjct: 361 DCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEXXXXX 420

Query: 421 NAMKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVA 480
                               XXXXXXXXXXXXXXXXX     CN DNKTWA+LIEG+C A
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNPDNKTWASLIEGHCAA 480

Query: 481 GDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDS 540
           GDL KASDCIHKMVEKG    A Y LDL+VN YCQKK ETDAS L  DLVD+ QLKP  S
Sbjct: 481 GDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHS 540

Query: 541 TYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSK 600
           TYK LINKLL+ GEF++ALKLLGMMRNHEFPPFI+PFI YVSKSGTADD + FLK MTSK
Sbjct: 541 TYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSK 600

Query: 601 SFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNL 652
            FPSTTV L LFEAFFQAGRHGDAQD L KCPGYIRNHADVL+LF SMK VEAAA  PNL
Sbjct: 601 KFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAA-SPNL 656

[Close]

BLAST of Carg05911 vs. TrEMBL
Match: tr|M5WR96|M5WR96_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G244800 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 1.7e-215
Identity = 394/659 (59.79%), Postives = 479/659 (72.69%), Query Frame = 0


Query: 1   MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSV---------- 60
           MR+ WRLL LRAH R    +     + QV S PNL SL   +S  H +++          
Sbjct: 1   MRHQWRLLLLRAHHRSSPHVFVKCCYSQVHSQPNLHSLSSLTSHFHTHTLDPKLSPSHPV 60

Query: 61  ---HGTSIVNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVIS 120
              H T+ +N R    R LS EP +  KDS H  + +IF+K R VD+IRK LE + VVIS
Sbjct: 61  FNSHLTTPINPRNPLSRSLSSEPALELKDSDHGAIAEIFAKHRGVDDIRKDLELNNVVIS 120

Query: 121 HDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD 180
           HDLVL VL  LESNPD A RFF WV    GE+LSSKSYN MLGI GVNG V EFWDL   
Sbjct: 121 HDLVLRVLKSLESNPDVARRFFDWVLACEGERLSSKSYNFMLGIFGVNGCVSEFWDLVDV 180

Query: 181 MKKKGYGISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNV 240
           MKKKGYG+SK VQ+K LEKFEKDGL  + EKLR VFASGS D SP+KI S VCK+VR  V
Sbjct: 181 MKKKGYGVSKWVQDKALEKFEKDGLGGDVEKLRVVFASGSTDNSPDKICSRVCKIVRNEV 240

Query: 241 WGDDVEQQLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMAR 300
           W  DVE+++ D+NV+ SSDMVK++LENL TEP KA IFFRW+ ESG  KHD+QTYNAMAR
Sbjct: 241 WSGDVERKILDLNVALSSDMVKVVLENLSTEPMKALIFFRWMEESGFLKHDQQTYNAMAR 300

Query: 301 VLGSEDSIERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKP 360
           VLG ED  +RFWKVVDEMRS+GYE+E+ET+ +VL RFCKR+MI++AV+LY FA+ G NKP
Sbjct: 301 VLGREDCKDRFWKVVDEMRSNGYELELETYVKVLGRFCKRKMIKDAVDLYEFALTGANKP 360

Query: 361 SVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNE 420
           SV C TFLL+KIA  K LD+SLFSR +++FTE GN LTDSM+ AVLK+L+ VGR GE N+
Sbjct: 361 SVHCCTFLLRKIAGGKQLDMSLFSRVVRVFTENGNVLTDSMLNAVLKALNGVGRHGECNK 420

Query: 421 VLNAMKEYGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYC 480
           V  AM+E G V SG L+ K+A+                 +EASG +SD K WA+LIEG+C
Sbjct: 421 VFKAMEEGGLVASGSLQSKIAFRLSSAGKKEQSSEFINNMEASGRSSDYKIWASLIEGHC 480

Query: 481 VAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW 540
           VAG+L  AS+C  KM+EK     AGY  +L+VNAYC+K R TDA +L  D V+E+QLKPW
Sbjct: 481 VAGNLNNASNCFQKMLEKEGAAYAGYAFELLVNAYCRKNRATDAYKLLHDSVNERQLKPW 540

Query: 541 DSTYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMT 600
             TYK LI+KLLV+G F++AL +LG+M+N  FPPF+DPFI YVSKSGT DDAI FLKAMT
Sbjct: 541 HMTYKLLISKLLVQGGFKDALNILGLMKNDGFPPFVDPFIEYVSKSGTGDDAIAFLKAMT 600

Query: 601 SKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPP 647
           S  FPST+VFL +F+A+F+AGRH +AQ+FLSKCPG+IRNHADVL+LF   +  E AA P
Sbjct: 601 SNRFPSTSVFLSVFKAYFKAGRHTEAQNFLSKCPGFIRNHADVLDLFLCAQSGEGAASP 659

[Close]

BLAST of Carg05911 vs. TrEMBL
Match: tr|A0A2I4FTG0|A0A2I4FTG0_9ROSI (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC109001892 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.4e-209
Identity = 386/651 (59.29%), Postives = 474/651 (72.81%), Query Frame = 0


Query: 1   MRYSWRLLRLRAH--FRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH---KYSVHGTSI 60
           MR+ WRLL L  H   R QL + S+SSHFQVLS+PNL SL   +SL +      +  +  
Sbjct: 1   MRHQWRLLLLGRHHLLRSQLHIHSHSSHFQVLSDPNLPSLHSLNSLFYCTAPQPISDSQF 60

Query: 61  VNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVL 120
            NS       LS EP + +KDS H V+ DIF+K   VD+ RK L+ S VV+SH+L L VL
Sbjct: 61  TNSTNTISSRLSSEPALEEKDSDHIVIADIFAKAMGVDDTRKELDLSDVVLSHELALRVL 120

Query: 121 GKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGI 180
            +LES+PD A RFF WV     E+LSSKSYNLMLGILG  G V EFWDL   MKKKGYGI
Sbjct: 121 NRLESSPDAAKRFFDWVLESDSERLSSKSYNLMLGILGNYGFVNEFWDLVEAMKKKGYGI 180

Query: 181 SKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQ 240
           SK VQNKVLEKF KDGL S+ EKLR V+ASGS+D S EK+ S VCK+VR +VWGDDVE+Q
Sbjct: 181 SKGVQNKVLEKFGKDGLGSDIEKLRGVYASGSVDNSMEKVCSRVCKIVRSDVWGDDVERQ 240

Query: 241 LRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSI 300
           LR+  V+FSSDMVKM+L+N+  EP KA IFFRW+ ESG+FKHD+ TYN MARVLG ED I
Sbjct: 241 LREFGVTFSSDMVKMVLQNVGVEPTKALIFFRWVEESGLFKHDKLTYNVMARVLGREDCI 300

Query: 301 ERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFL 360
           +RFWKVVDEMRS+GYEME ET+ +VL RFCKR+M ++AV+LY FAMAG  KPSV C TFL
Sbjct: 301 DRFWKVVDEMRSNGYEMEEETYVKVLGRFCKRKMTKDAVDLYEFAMAGARKPSVHCGTFL 360

Query: 361 LKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEY 420
           L+K+AVSK  D+ LFSR ++IFT++GN +T+SM+ AVLKSL++VGR  + N+VL AMKE 
Sbjct: 361 LRKVAVSKEFDMHLFSRVVRIFTQSGNVMTNSMLHAVLKSLTSVGRFRDCNKVLKAMKEG 420

Query: 421 GYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAKA 480
           G+V SG L+ K+ +                 LE  G N D+ TW +LIEG+CVAG+  KA
Sbjct: 421 GFVASGHLQSKIVFKVSSSGKNDEASELLETLEKCGSNLDHGTWTSLIEGHCVAGNHDKA 480

Query: 481 SDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALI 540
           S+C  KMVEK     AG   +++VN+YCQK R  DA  L   LV+ KQLKP  +TYK LI
Sbjct: 481 SECFQKMVEKEGVSSAGNAFNILVNSYCQKNRAIDACMLLVGLVNVKQLKPCHNTYKELI 540

Query: 541 NKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTT 600
           +KLLV+  F++AL LLG+M+N  FPP++DPFI YVSKSGT DDAI FLK MTSK FP+T+
Sbjct: 541 SKLLVQDGFKDALNLLGLMKNQGFPPYVDPFIKYVSKSGTGDDAIVFLKEMTSKRFPATS 600

Query: 601 VFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELF---NSMKHVEAA 644
           VF+ +FEAFF+AGR+ +AQ+ LSKCPG+IRNHADVL LF   NS K V  A
Sbjct: 601 VFIRMFEAFFKAGRYTEAQNLLSKCPGFIRNHADVLNLFCSVNSRKGVSTA 651

[Close]

BLAST of Carg05911 vs. TrEMBL
Match: tr|A0A2P6S3H4|A0A2P6S3H4_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0164021 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 2.3e-201
Identity = 374/650 (57.54%), Postives = 464/650 (71.38%), Query Frame = 0


Query: 1   MRYSW-RLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYF-SSLLHKYSVHGTSI--- 60
           MR+ W RLL LRAH R    + S SS+ QV S  NL S   F +  LH       SI   
Sbjct: 1   MRHPWQRLLLLRAHLRSSPHVFSQSSYSQVNSQSNLHSFSLFHTDTLHPKLPTLQSIFNY 60

Query: 61  -VNSRYRTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEV 120
            +N R    R LS EP +  KDS H V+ +IFS+ RD  +IRK LE + V  +HD VL V
Sbjct: 61  PLNPRNPMSRNLSSEPALETKDSDHGVIAEIFSRPRDEIDIRKDLELNNVEFTHDFVLSV 120

Query: 121 LGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYG 180
           L  LES+PD A R F WV    G++LSSKSYN ML ILGVNG V+EFW+L   MKKKGYG
Sbjct: 121 LKSLESSPDVARRVFDWVLLSEGKRLSSKSYNQMLCILGVNGVVKEFWELVYVMKKKGYG 180

Query: 181 ISKSVQNKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQ 240
           +SK V ++VLEKFE+DGLE++AE+LR VFASGS D S  K+ S VCK+VR  VW DD+E+
Sbjct: 181 VSKWVHDRVLEKFEEDGLENDAEELRGVFASGSTDSSVAKVCSTVCKIVRNEVWSDDIER 240

Query: 241 QLRDMNVSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDS 300
           Q+R++NV FSSD+VKM++E+L TEP KA IFFRW+ E+G+ KHD+QTYNA+ARVLG  D 
Sbjct: 241 QIRELNVEFSSDVVKMVVEHLKTEPTKALIFFRWVEEAGLLKHDQQTYNAVARVLGRIDC 300

Query: 301 IERFWKVVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTF 360
            +RFWKVVD+M S+G E+E+ T+ +VL RFCKR  +++AV+LY FAMAG  KP V C TF
Sbjct: 301 RDRFWKVVDDMSSNGCELELNTYDKVLERFCKRGELKDAVDLYEFAMAGKKKPPVACCTF 360

Query: 361 LLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKE 420
           LLKKI V K LD+ LFSR ++I+TE+GNALT+SM+ AVLKSL +VGR+GE N+V   M+E
Sbjct: 361 LLKKIVVGKELDMGLFSRVVRIYTESGNALTNSMLNAVLKSLISVGRLGECNKVFKVMEE 420

Query: 421 YGYVFSGGLKRKVAYXXXXXXXXXXXXXXXXXLEASGCNSDNKTWAALIEGYCVAGDLAK 480
            G V S GL+  +A+                 ++ASG + + K W++LIEGYCVAGDL K
Sbjct: 421 GGLVASAGLQSIIAFRLGSAGKEDEASDFINIMQASGTDLNYKAWSSLIEGYCVAGDLEK 480

Query: 481 ASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKAL 540
           ASDC  KM+E+     AG   +LV+NAYC+K R TDA +   DLV ++QLKPW +TYK L
Sbjct: 481 ASDCFQKMIEREGVASAGSAFELVINAYCRKNRATDAYKFLSDLVSKRQLKPWQTTYKLL 540

Query: 541 INKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPST 600
           I+KLL +GEFR AL +LG+M+N  FPPFIDPFI +VSKSGT DDAI FLK M SK FPST
Sbjct: 541 ISKLLAQGEFRNALHILGLMKNDRFPPFIDPFIKHVSKSGTGDDAIAFLKIMASKEFPST 600

Query: 601 TVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAA 645
            VFL +FEA+F+AGR  +AQDFLSKCPGYIRNHADVL LF   K  E AA
Sbjct: 601 IVFLKVFEAYFKAGRRSEAQDFLSKCPGYIRNHADVLNLFCPGKSGEGAA 650

The following BLAST results are available for this feature:

BLAST of Carg05911 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921370.1	0.0e+00	98.31	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor...	[more]
XP_023511958.1	0.0e+00	97.85	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucur...	[more]
XP_022990729.1	0.0e+00	95.08	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor...	[more]
XP_022921377.1	0.0e+00	98.81	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor...	[more]
XP_022990730.1	0.0e+00	95.74	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor...	[more]

BLAST of Carg05911 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02490.1	4.6e-171	49.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G15980.1	1.8e-170	49.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G48250.1	2.2e-48	31.89	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G15010.1	8.3e-11	23.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02420.1	3.5e-09	24.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg05911 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M891\|PP208_ARATH	8.4e-170	49.62	Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop...	[more]
sp\|Q8LPF1\|PP387_ARATH	3.2e-169	49.40	Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop...	[more]
sp\|Q9STK5\|PP269_ARATH	4.0e-47	31.89	Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop...	[more]
sp\|Q9LFQ4\|PP383_ARATH	1.5e-09	23.53	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
sp\|Q9FZ19\|PPR5_ARATH	6.3e-08	24.69	Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th...	[more]

BLAST of Carg05911 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9Q1\|A0A1S3C9Q1_CUCME	1.8e-281	76.13	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc...	[more]
tr\|A0A0A0KSL3\|A0A0A0KSL3_CUCSA	2.5e-256	73.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1	[more]
tr\|M5WR96\|M5WR96_PRUPE	1.7e-215	59.79	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G244800 PE=4 SV=1	[more]
tr\|A0A2I4FTG0\|A0A2I4FTG0_9ROSI	1.4e-209	59.29	pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Jug...	[more]
tr\|A0A2P6S3H4\|A0A2P6S3H4_ROSCH	2.3e-201	57.54	Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05911-RA	Carg05911-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 82..235 e-value: 1.3E-7 score: 33.1 coord: 236..369 e-value: 1.9E-16 score: 61.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 492..644 e-value: 8.8E-11 score: 43.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 370..491 e-value: 1.2E-7 score: 33.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 458..487 e-value: 9.7E-6 score: 23.4 coord: 530..561 e-value: 0.0018 score: 16.3 coord: 281..311 e-value: 3.1E-4 score: 18.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 458..487 e-value: 4.9E-5 score: 23.2 coord: 529..557 e-value: 0.0066 score: 16.5 coord: 281..309 e-value: 0.19 score: 12.0 coord: 144..172 e-value: 0.2 score: 11.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 491..526 score: 7.465
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 313..347 score: 8.353
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..312 score: 9.536
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 455..489 score: 10.501
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 385..419 score: 5.744
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 527..561 score: 8.835
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 8.528
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 4..644
None	No IPR available	PANTHER	PTHR24015:SF350	SUBFAMILY NOT NAMED	coord: 4..644

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05911	Cla016487	Watermelon (97103) v1	carwmB0025
Carg05911	Csa5G643230	Cucumber (Chinese Long) v2	carcuB0021
Carg05911	MELO3C022082	Melon (DHL92) v3.5.1	carmeB0017
Carg05911	ClCG11G005110	Watermelon (Charleston Gray)	carwcgB0019
Carg05911	CSPI05G29730	Wild cucumber (PI 183967)	carcpiB0022
Carg05911	Cucsa.238370	Cucumber (Gy14) v1	carcgyB0024
Carg05911	CmaCh04G028320	Cucurbita maxima (Rimu)	carcmaB0033
Carg05911	CmaCh15G002030	Cucurbita maxima (Rimu)	carcmaB0030
Carg05911	CmoCh04G029600	Cucurbita moschata (Rifu)	carcmoB0033
Carg05911	CmoCh15G002160	Cucurbita moschata (Rifu)	carcmoB0031
Carg05911	Lsi03G002030	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg05911	Cp4.1LG13g07870	Cucurbita pepo (Zucchini)	carcpeB0031
Carg05911	Cp4.1LG01g22150	Cucurbita pepo (Zucchini)	carcpeB0034
Carg05911	CsGy5G029160	Cucumber (Gy14) v2	carcgybB0021
Carg05911	MELO3C022082.2	Melon (DHL92) v3.6.1	carmedB0018
Carg05911	CsaV3_5G038850	Cucumber (Chinese Long) v3	carcucB0022
Carg05911	Cla97C11G211930	Watermelon (97103) v2	carwmbB0015
Carg05911	Bhi06G000221	Wax gourd	carwgoB0020

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05911	Carg02193	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05911	Watermelon (97103) v2	carwmbB0021
Carg05911	Wax gourd	carwgoB0025
Carg05911	Silver-seed gourd	carcarB021
Carg05911	Silver-seed gourd	carcarB024
Carg05911	Cucumber (Gy14) v2	carcgybB0019
Carg05911	Cucumber (Gy14) v1	carcgyB0018
Carg05911	Cucurbita maxima (Rimu)	carcmaB0032
Carg05911	Cucurbita moschata (Rifu)	carcmoB0032
Carg05911	Cucurbita moschata (Rifu)	carcmoB0035
Carg05911	Cucurbita pepo (Zucchini)	carcpeB0030
Carg05911	Wild cucumber (PI 183967)	carcpiB0020
Carg05911	Cucumber (Chinese Long) v2	carcuB0020
Carg05911	Cucumber (Chinese Long) v3	carcucB0020
Carg05911	Bottle gourd (USVL1VR-Ls)	carlsiB015
Carg05911	Melon (DHL92) v3.5.1	carmeB0018
Carg05911	Melon (DHL92) v3.6.1	carmedB0019
Carg05911	Watermelon (Charleston Gray)	carwcgB0026
Carg05911	Watermelon (97103) v1	carwmB0019