Carg05732 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGATTGGCAGCTTCTCATCTTTCACCAGAAGCCTAAAATGGTATAAATCTGAACGAGCATTGGCCAGAATCTTGCCACAACGCCCCAATGCACACCAGCCACAGATATTACACGCTTTAAGCTCTCAAATGGCGAGCCCCACCTGCCGTGATTTTAGATTTTTGATTCCGCTTGCAAGAATTTTACAGTTTACTCAACGTCTTAATTCTTTAGTATCTAGAACATTGTAGCATAATCTTTTCCCTTCTCGATGATTTCGTCGCCCAGCGGCATTGCGCCGTCGCATAAGACAGAGCTTTATGCCCTTACTGCTAATTCGGCTTTTGTTCCTCTGAGGAGAGCATTTCAACATAGTAAGATTCATAGCTTACTTTTTTTTGCTCAGTGTTTCTAGTTGCGGATTCTAAGTACTGAATTGTTTGAGTTTGGGTTTCTTCTCGGAGGAAGCAAATGTGTTATGAACAGGAGAAGTTTTGCCTTTAGGGGAATTGTGGCTTCTGGAGTTTCAGTTATGGGCTCTTCTGTGGTTATGCAGCCTGCTCAAGGTCAGAATCTTTTATGTGTGTGTGTATATATTTGACCTCTTTAATGGGGTTTGCTAGTGAGTTATTCAATGCAGCTTGGCTAAGTCTTGCTATAATATTTCTGTAGGGATTGAAAGATTGCCTTTCAAACCAGAAGGTTATAATTTCTGGACGTGGCGGGGTCACAAGATACATTATGTTGTACAAGGGGAAGGTCCTCCAATAGTTCTTATTCATGGTTTTGGTGCTTCTGTATTTCATTGGAGGTTTGATTTAGTTGCCTTTTCTCCTTAATCGTTGTACTTTAATGAATGAGTTGAAAAACTATTAAGTTCTCTCAAGTTTTTGGTATTAGATCATAAGTTCAAATTCTATATCTTTTTATTTCTACTTCATATTAATAATCAAGGCATTGGAAGTTTGGTTCAAATTCTATATCTTTTTATTTCTACTTCATATTAATAATCAAGGCATTGGAAGTTTGGATTATGATTAATATTTGAGTTCACGTGTTAACAAATGGAATGAATCAAAGAACTTGAACTTCTGAGTCTTGTGGCAACTTAACTGATCCTTGTTGTTGATAAATTGAGTGATTCCTCTTGGGCAATGGAGCGTGCTGCTTATTTATTTATAGCTTATTCAATTGTTATATATATATATACATGGTAAAAGTATATATGTGGTCTAAATGACTATTTATAGTAAAAAGTTGGTAGAGCTATATATATATATATGTATGGTAGATAGTTATATATGGTCGATGGTTATATTGGTAAAACTATATATATATACCACTTACGCAGTGCTTTGAAACTTTCCATATTCTCTTTTACTTTACATACCGAAGTCATCGATATAAACCTTTAGTCAATGTTCCTCTTTGCATTTCTCTCTCTTGTTCTTTGTGTTCATCTAGATTGAGTGTTTGCATTGTTGTGCCATCCTAACACTTCCTTATCTTTTTATGGTTTTTTTCCCCTAAATGAAGGTATAACATACCAGAGCTGGCTAAAAAGTACAAGGTTTATGCCTTAGACTTGCTGGGATTTGGGTGGAGTGATAAAGCAATTATTGAGTACGATGCCATGGTCTGGAGGGACCAAGTTGTCGATTTTATGAAGGAAATAGTGAAACAGCCCGCAGTTTTAGTTGGGAACAGGTAATAAAATGGACTGAATATAAGTTTAAAGGACTTAGCTCTATAAACTTGTGTACTCGAAATCTTTATCATCATTACATTTTGATATTTATGTTGCTTGTCCACATTCACACTTTCTTCTTCTTCTATCAAACTACTTAACTTTTTAGTACTTGAAGTTGAACTCGTGTCTGTACATCTCCTTATGTTTTGAGAGATATATTGAAACGATCTTAGTGAAAGCTCGGTTTCTCGAAAAAGAATGTAATGGTAAAATAGGTGTCCTAGTTCCTTTTTCGAACTACTCTTTGGAAGGTTTTTTTGGATGGCTTTATAGGTTAAGTTCGTTGTACAAAAGGCCACTTTCAAATACACGATTTTGACACAAAGAACTTTACTTTGTTTTTATAACAGCCCAAGCCCACTGCTAACAGATATTGTCCGTTTTGGTCCATTAGGTATCACCGCCAGCCTCACGGTTTTAAAACGGGTCTGTTAGGGAGAGGTTTCCAAACCCTTATGAGCAATATCTCGTTCCTTTCTCCAACCAATGTGGGATCTCACAATCCACCCCCATGGGGACCCAGCGTCCTCGCTGGCACACTGCCTGGTGTCTAGCTTTAACACCATTTATAACAGTCCAAGCCCATCGCTTATAGATATTGTCCACTTTGGCTCGTTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGCATCTGTTAGGGGGAGAGGTTTCCACACCCTTATAAGTAATGTCTTGTTTCTCTCTCCAGCCGACGTGGGATCTCACAGTTTTAAAACATGAGTCATTCGTAAAAGCAAACTAAAGGATCTCACAGTTTTATCCAAAGGTATTATTTATATGCCTGTGATTTTGTCAAGATGGCACCATCAGGTGTTTTATTTATCATTTCAGTGTCTCTTTGCCTGCATGTTTCAAAATGTGATACCCATTTTTTTTTGGATAAAAAGCATGTGTTCTAAGTTGCCTGCACTCCCTTGTAGAGTCTACTTCAACTTATGTCTCAACTCGACTTTTCTTGGATTAACTAATTGGCCTTATTTTGCGAGTCTTAACCTATTACTGTAATTCTATTGTTTCCTCATATTTCAGTATGGTTTGTTTTAGATGTTATAATCTACGGTTACAATGGCAAAGCAAAAGCCAAAAGTTTGTCCATGTTGGTTGTCAGTAGTGGTGGCTGGAGCAGGACTAGGCTTTTGATTCAAACTGATTCTTGATGTTGCATTGAAGTGACTAATTAATGGTTTTTGGCAGCCTCGGAGGATTTACCGCCTTGGTTTCAGCAGCAGGGTCGCCAGAGCAAGTTCGCGGAGTCGTATTACTAAACTCCGCCGGGCAGTTCGGAGACACAAATAAGTCGACAGATGAGCCAGAAGAAGAAACAAGCTTTCAGAAATTCCTCTTGAAGCCACTGAAAGATTTTTTTCAGCGGATCTTTCTTGGAGTTCTTTTCTGGCAAACTAAGCAACCAGCTAGAATTGTTTCTGTTTTGAAGAGTGTAAGTGGTGGCTAAACTCTTTGTTGTCTCAAATGGTGATCCACTTTGCATAAGCATTTCTGGTCGTCCTGTGTCACGGTCATGCTTGAAAGTGCGATTGTGACACCCTGCTCGAATATCTTGTAATTCATCTTGGTTGCCCTTACAGGTGTACATAAATTCTGAAAATGTGGATGACTATCTGGTAGAGTCTATAACAAGGCCAGCAGCCGACCCGAATGCTAGAGAAGTTTATTACAGGTACGTGTGTTACTTCCCCGTGGTTGGAAAAGGCGAAGTATTAGAAATATACATAAAAGATCGACATACTCTTACCTATCAACTTAGTTTTTTAAAATTCATGATAAGTTTAATGCATAGATAAGTGGATCATACTCTTACCCATCAAGTTAGGCTTTTGAAACTCATGATAGTTTAACACATGGATTAGTGAATCATAGTCATTGCTCGGAGCATGAAGTTTGTCGATTTCGGTGCAGATTGATGACGAGATTCATGTTCAATCAAAGCAAATATACACTAAACAGTGTGCTGAGTGAGCTGTGTTGCCCATTGTTGTTGCTGTGGGGTGACTTAGATCCATGGGTTGGACCTGCTAAGGCCAACAGAATCAAAGAGTTCTATCCCAACACCAGTGTTGTACATTTGAAAGCAGGCCATTGCCCACATGATGAAGTTCCAGAGCTTGTCAACTCAGCTTTGATGGATTGGCTGGCAACCCTGCAACAAGCTCAGCCAACACTCTGAAAAACTCTTCTCAAAATTTTACTGTCACTTGTGAATCTTCACTCCATTTTGAGATTTATGTATACTTTTCAAATGAAATTAATTTTTATTAAATTTGGTAAACAAAAAAATATTTTGTTATTTTAGGAAAAGATATAATATAAAGTGAATATATTTTCATCTCGGGATAAGCTGTTATTGTGTCATAAGCAAATGTGGCAACTTGGTAACTCCTCCGGTTCTATTTTGTGGCGCGAAACTATCGAGGTCATGAGATCGCGCTCCTCCTCCTCCTTTCGAGGTCATGAGATCACGTTCCTCTTCCTCTCTTTTGTTTATTTCTTCTTTTTCGAGTGAATTCGAGAGAAGGTCCGA AAACGATTGGCAGCTTCTCATCTTTCACCAGAAGCCTAAAATGGTATAAATCTGAACGAGCATTGGCCAGAATCTTGCCACAACGCCCCAATGCACACCAGCCACAGATATTACACGCTTTAAGCTCTCAAATGGCGAGCCCCACCTGCCGTGATTTTAGATTTTTGATTCCGCTTGCAAGAATTTTACAGTTTACTCAACGTCTTAATTCTTTAGTATCTAGAACATTGTAGCATAATCTTTTCCCTTCTCGATGATTTCGTCGCCCAGCGGCATTGCGCCGTCGCATAAGACAGAGCTTTATGCCCTTACTGCTAATTCGGCTTTTGTTCCTCTGAGGAGAGCATTTCAACATAGAAGCAAATGTGTTATGAACAGGAGAAGTTTTGCCTTTAGGGGAATTGTGGCTTCTGGAGTTTCAGTTATGGGCTCTTCTGTGGTTATGCAGCCTGCTCAAGGGATTGAAAGATTGCCTTTCAAACCAGAAGGTTATAATTTCTGGACGTGGCGGGGTCACAAGATACATTATGTTGTACAAGGGGAAGGTCCTCCAATAGTTCTTATTCATGGTTTTGGTGCTTCTGTATTTCATTGGAGGTATAACATACCAGAGCTGGCTAAAAAGTACAAGGTTTATGCCTTAGACTTGCTGGGATTTGGGTGGAGTGATAAAGCAATTATTGAGTACGATGCCATGGTCTGGAGGGACCAAGTTGTCGATTTTATGAAGGAAATAGTGAAACAGCCCGCAGTTTTAGTTGGGAACAGCCTCGGAGGATTTACCGCCTTGGTTTCAGCAGCAGGGTCGCCAGAGCAAGTTCGCGGAGTCGTATTACTAAACTCCGCCGGGCAGTTCGGAGACACAAATAAGTCGACAGATGAGCCAGAAGAAGAAACAAGCTTTCAGAAATTCCTCTTGAAGCCACTGAAAGATTTTTTTCAGCGGATCTTTCTTGGAGTTCTTTTCTGGCAAACTAAGCAACCAGCTAGAATTGTTTCTGTTTTGAAGAGTGTGTACATAAATTCTGAAAATGTGGATGACTATCTGGTAGAGTCTATAACAAGGCCAGCAGCCGACCCGAATGCTAGAGAAGTTTATTACAGATTGATGACGAGATTCATGTTCAATCAAAGCAAATATACACTAAACAGTGTGCTGAGTGAGCTGTGTTGCCCATTGTTGTTGCTGTGGGGTGACTTAGATCCATGGGTTGGACCTGCTAAGGCCAACAGAATCAAAGAGTTCTATCCCAACACCAGTGTTGTACATTTGAAAGCAGGCCATTGCCCACATGATGAAGTTCCAGAGCTTGTCAACTCAGCTTTGATGGATTGGCTGGCAACCCTGCAACAAGCTCAGCCAACACTCTGAAAAACTCTTCTCAAAATTTTACTGTCACTTGTGAATCTTCACTCCATTTTGAGATTTATGTATACTTTTCAAATGAAATTAATTTTTATTAAATTTGGTAAACAAAAAAATATTTTGTTATTTTAGGAAAAGATATAATATAAAGTGAATATATTTTCATCTCGGTAACTCCTCCGGTTCTATTTTGTGGCGCGAAACTATCGAGGTCATGAGATCGCGCTCCTCCTCTCTTTTGTTTATTTCTTCTTTTTCGAGTGAATTCGAGAGAAGGTCCGA ATGATTTCGTCGCCCAGCGGCATTGCGCCGTCGCATAAGACAGAGCTTTATGCCCTTACTGCTAATTCGGCTTTTGTTCCTCTGAGGAGAGCATTTCAACATAGAAGCAAATGTGTTATGAACAGGAGAAGTTTTGCCTTTAGGGGAATTGTGGCTTCTGGAGTTTCAGTTATGGGCTCTTCTGTGGTTATGCAGCCTGCTCAAGGGATTGAAAGATTGCCTTTCAAACCAGAAGGTTATAATTTCTGGACGTGGCGGGGTCACAAGATACATTATGTTGTACAAGGGGAAGGTCCTCCAATAGTTCTTATTCATGGTTTTGGTGCTTCTGTATTTCATTGGAGGTATAACATACCAGAGCTGGCTAAAAAGTACAAGGTTTATGCCTTAGACTTGCTGGGATTTGGGTGGAGTGATAAAGCAATTATTGAGTACGATGCCATGGTCTGGAGGGACCAAGTTGTCGATTTTATGAAGGAAATAGTGAAACAGCCCGCAGTTTTAGTTGGGAACAGCCTCGGAGGATTTACCGCCTTGGTTTCAGCAGCAGGGTCGCCAGAGCAAGTTCGCGGAGTCGTATTACTAAACTCCGCCGGGCAGTTCGGAGACACAAATAAGTCGACAGATGAGCCAGAAGAAGAAACAAGCTTTCAGAAATTCCTCTTGAAGCCACTGAAAGATTTTTTTCAGCGGATCTTTCTTGGAGTTCTTTTCTGGCAAACTAAGCAACCAGCTAGAATTGTTTCTGTTTTGAAGAGTGTGTACATAAATTCTGAAAATGTGGATGACTATCTGGTAGAGTCTATAACAAGGCCAGCAGCCGACCCGAATGCTAGAGAAGTTTATTACAGATTGATGACGAGATTCATGTTCAATCAAAGCAAATATACACTAAACAGTGTGCTGAGTGAGCTGTGTTGCCCATTGTTGTTGCTGTGGGGTGACTTAGATCCATGGGTTGGACCTGCTAAGGCCAACAGAATCAAAGAGTTCTATCCCAACACCAGTGTTGTACATTTGAAAGCAGGCCATTGCCCACATGATGAAGTTCCAGAGCTTGTCAACTCAGCTTTGATGGATTGGCTGGCAACCCTGCAACAAGCTCAGCCAACACTCTGA MISSPSGIAPSHKTELYALTANSAFVPLRRAFQHRSKCVMNRRSFAFRGIVASGVSVMGSSVVMQPAQGIERLPFKPEGYNFWTWRGHKIHYVVQGEGPPIVLIHGFGASVFHWRYNIPELAKKYKVYALDLLGFGWSDKAIIEYDAMVWRDQVVDFMKEIVKQPAVLVGNSLGGFTALVSAAGSPEQVRGVVLLNSAGQFGDTNKSTDEPEEETSFQKFLLKPLKDFFQRIFLGVLFWQTKQPARIVSVLKSVYINSENVDDYLVESITRPAADPNAREVYYRLMTRFMFNQSKYTLNSVLSELCCPLLLLWGDLDPWVGPAKANRIKEFYPNTSVVHLKAGHCPHDEVPELVNSALMDWLATLQQAQPTL
BLAST of Carg05732 vs. NCBI nr
Match: XP_022929207.1 (pheophytinase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 761.1 bits (1964), Expect = 1.7e-216 Identity = 371/372 (99.73%), Postives = 372/372 (100.00%), Query Frame = 0
BLAST of Carg05732 vs. NCBI nr
Match: XP_023552597.1 (pheophytinase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 751.1 bits (1938), Expect = 1.8e-213 Identity = 366/372 (98.39%), Postives = 369/372 (99.19%), Query Frame = 0
BLAST of Carg05732 vs. NCBI nr
Match: XP_022985286.1 (pheophytinase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 747.7 bits (1929), Expect = 1.9e-212 Identity = 364/372 (97.85%), Postives = 368/372 (98.92%), Query Frame = 0
BLAST of Carg05732 vs. NCBI nr
Match: XP_008452064.1 (PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 700.7 bits (1807), Expect = 2.7e-198 Identity = 346/374 (92.51%), Postives = 357/374 (95.45%), Query Frame = 0
BLAST of Carg05732 vs. NCBI nr
Match: XP_004146511.1 (PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis sativus] >XP_011653165.1 PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis sativus] >KGN53319.1 hypothetical protein Csa_4G046820 [Cucumis sativus]) HSP 1 Score: 695.3 bits (1793), Expect = 1.1e-196 Identity = 343/374 (91.71%), Postives = 356/374 (95.19%), Query Frame = 0
BLAST of Carg05732 vs. TAIR10
Match: AT4G36530.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-151 Identity = 259/371 (69.81%), Postives = 305/371 (82.21%), Query Frame = 0
BLAST of Carg05732 vs. TAIR10
Match: AT5G19850.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 171.4 bits (433), Expect = 1.0e-42 Identity = 104/300 (34.67%), Postives = 158/300 (52.67%), Query Frame = 0
BLAST of Carg05732 vs. TAIR10
Match: AT5G38520.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 170.2 bits (430), Expect = 2.3e-42 Identity = 118/356 (33.15%), Postives = 181/356 (50.84%), Query Frame = 0
BLAST of Carg05732 vs. TAIR10
Match: AT4G25290.1 (DNA photolyases;DNA photolyases) HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37 Identity = 104/297 (35.02%), Postives = 150/297 (50.51%), Query Frame = 0
BLAST of Carg05732 vs. TAIR10
Match: AT5G13800.2 (pheophytinase) HSP 1 Score: 135.2 bits (339), Expect = 8.3e-32 Identity = 91/321 (28.35%), Postives = 137/321 (42.68%), Query Frame = 0
BLAST of Carg05732 vs. Swiss-Prot
Match: sp|Q9FFZ1|PPH_ARATH (Pheophytinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPH PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30 Identity = 91/321 (28.35%), Postives = 137/321 (42.68%), Query Frame = 0
BLAST of Carg05732 vs. Swiss-Prot
Match: sp|O05235|YUGF_BACSU (Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) OX=224308 GN=yugF PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18 Identity = 76/274 (27.74%), Postives = 129/274 (47.08%), Query Frame = 0
BLAST of Carg05732 vs. Swiss-Prot
Match: sp|P19076|DMPD_PSEUF (2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) OX=79676 GN=dmpD PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 8.0e-16 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of Carg05732 vs. Swiss-Prot
Match: sp|Q9AQM4|CARC_PSERE (2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase OS=Pseudomonas resinovorans OX=53412 GN=carC PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.2e-14 Identity = 76/283 (26.86%), Postives = 127/283 (44.88%), Query Frame = 0
BLAST of Carg05732 vs. Swiss-Prot
Match: sp|Q02104|LIP1_PSYIM (Lipase 1 OS=Psychrobacter immobilis OX=498 GN=lip1 PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 2.0e-14 Identity = 70/269 (26.02%), Postives = 127/269 (47.21%), Query Frame = 0
BLAST of Carg05732 vs. TrEMBL
Match: tr|A0A1S3BSY0|A0A1S3BSY0_CUCME (pheophytinase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493182 PE=4 SV=1) HSP 1 Score: 700.7 bits (1807), Expect = 1.8e-198 Identity = 346/374 (92.51%), Postives = 357/374 (95.45%), Query Frame = 0
BLAST of Carg05732 vs. TrEMBL
Match: tr|A0A0A0KWQ9|A0A0A0KWQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046820 PE=4 SV=1) HSP 1 Score: 695.3 bits (1793), Expect = 7.6e-197 Identity = 343/374 (91.71%), Postives = 356/374 (95.19%), Query Frame = 0
BLAST of Carg05732 vs. TrEMBL
Match: tr|A0A1S3BU47|A0A1S3BU47_CUCME (pheophytinase, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493182 PE=4 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 6.3e-175 Identity = 314/374 (83.96%), Postives = 324/374 (86.63%), Query Frame = 0
BLAST of Carg05732 vs. TrEMBL
Match: tr|M5WG09|M5WG09_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G157100 PE=4 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 1.1e-166 Identity = 280/364 (76.92%), Postives = 319/364 (87.64%), Query Frame = 0
BLAST of Carg05732 vs. TrEMBL
Match: tr|A9PI88|A9PI88_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G121000v3 PE=2 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 9.1e-166 Identity = 284/366 (77.60%), Postives = 320/366 (87.43%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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