Carg05626 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05626
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ubiquitin thioesterase OTU1
Location	Cucurbita_argyrosperma_scaffold_033 : 7947 .. 13143 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGGACACTTTCGATTCGCCTCGAGCGCCTTCATGTATAATTTAATTAGCGCATCCAACAAAATCTGGCGTTAACGAGCATTGGCAACCGGAAATATGAAACGGCTTCTTGATTGATTTTTTCTTCGATTGATTCATAAGGAAAAGGAAAGCGTATCTGATTCCTTTCTTTCTTTCATCCATCTGTTATCTTCTATTTTGGTCGTCTTCGACTTTATTGCTGGTAAATCTCTTCTCCTTTATGTACGCAGAATTGGATCTAGAAATTTCTCGGGTTTGAGTTATTGTGTTCGTGTTTAGGTCGAATTCGATCTGGTATTTGCAATTTGTGATTGATTTAGTTTTGTAGTTTGAGAAGAGGGTTTTTCAAAGCATACGTTTGTGTGAGTTTATGTATGTAGCTAGAAGGCTAGAAGCTTTGTTTTCTGAAAGGTTTTGCATATTTTGACTTTGTTAATCGCCTTCTGTTTATGTTTTTCTTTTTCTGTCTGAGCTTTTGAATGCTATGCTTGTGCATTGAGATGTTCTTGAGTGTTCTTGTTCTTGGTTATGTTCTGCTAGTGATTTCATTGCTTATTTGTGTATGGAATGTGAAGTTTATTGAAGCACCATCCCTTGATTGAATTGATTTCAGGTAATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGGTAAACTTCAAATTACTTGCCTATCCATTCCTGGATAATGATTAAGAGATAGGAATCTGTATAGTCTATAAAATGGGTATATTTAACTTGTGATATGCCAATATGTGAGATCCCACATTAGGGAGAGCGAAACATTCCTTATAAGGGTGTGGAAACCTTTCCCTAGTAGATGCATTTTAAAACCTTGAGAGAAAGTCCAAAGAAGACAATATTTGTTAGTGGGTTTGGGCTGTTACAAATGGTATCAGAGCTAGACACTAGGCGGTGTGCTAGTGAGGGACGTTGGCCCACAAGGGGGTGGATTGTGAATTCCCATGTTAGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGGGTGAAATCCTTTTCCCAGTAGACACATTTTAAAATCTCGAGGGAAAGTCCAAAGAGAACAATATCTGCTAGTGATGGGCTGTTACACAATACGATACATGAGCAAGACTAAAAACTGAAAGATTATGAACTTCTTTACATATGATTTTTAATTGTTTTGAAGACTAACTTTATCCCCGCTGTTTTTTGTGGCTCCACCAAGCAAATTAAGAGAGTTTGAAGATAATAAGCTATAGGCTTCTTGACATATAATTTTAAAGAAAAGTATGGGTCCCCCTCTTGTTTGTGGCTGTACCACTGCCCGTTTCGAGTGTAAGTTCATGTACCAAGTTCAACTCTTTTTGAAACCCCTGAAATGTAATGAGCATACAAATACATTTGAAAATATAATGTTTTATGGGTCCTTTCCATTTTGATATTTTGGTGTTGTAGAAAATTCATTGTCAGTTGTGCCCATGTCTCATGTTCATATTTGTGCTACTTCTGTTGTGCTCGATCTTTATCTTTTTTGTGTAATATATGCCAGTTATGTTATGGACCACGACAAAGGCAAGGCTACCGAGCTAAGACAGGTTCTAATTCATCATATTTTATCATTTTCGGAACCAGATTTTACTGCTTTTCAATGCATCACTATTTCGGAGTTATTTTCAAATTCTAAATTCTTCGAAGGAAGATAGATCCAACCCGAACAACTTGCATTTAATTCCCTTGTAGTGTAGATATACTAAAAAATAAGTAGCAGAATTCTGTATTGCATGCTTGACCAACTTTTCATTGATGAAGAAGATGCAGTATCTGATGTGTAAAAATGCTAGACTTCAAATGAAAGCATCCGTGAGATCCCACATCGGTTGCGAAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAAACCTTGAGGGGAAGCCCATAAGGGAAAGCCCAAAAAAGACAGTATCTGCTAGCAGTAGACTTAGGCCGTTACAGCATCGCTCTCCACCACGCATCACTCCCAACACGCCACATAGAAACAAAAAGAACAAGGAAAAGGCATATGCTTAATCTATAGAATCATAGAGCCGAAAGAAATCTGGGATAGAACCCACACAGAAAAAGGCATGCGTAGCTACTTTTTGTACAAAATCGTATTTGAATTCTTTACTCTGAACATCTTGGACAATTGATTTTCTTTTAAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTTTGTATCTCTATTATCATTACTAAATGGAAGAGTTTTTATGAGATTTTCTTGTAGATCTTCAAAACATGTAGTTATCCTGCTGTTTCTTGTTTTCTAGCATTAGATTATTGGTTTGGTGTTTTGTTGAACTTGTGGAATGAACCCTTTTGGGGGTTTTCCTGTATTCTTAAAAGTTGTAAAAGTGTTCTGCCATTATGTAGCAGCTGAATCCAAATCTATATTACTAGAGAGAACGTACTTTGGCATCTGAACGTGCCGGTGCATCTGGTTAGGCATCGGTCATATGCCATGTTAAGTACTCGATTTTCTTCTTTTCAAGTTTGTTTTCTCCGACGCAGGCGCCATTGAGCTTTCGATACTATCTGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACAACACGATGTGATTTGTATGGTCAGGTTAGGATTTTCTATTCCGATGACTCCATTGGCTCGGTAGGAATAATCTTTTTGACTTCCTGATGCTGATTATCTGTCATCTTTGACAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTGTATGATTTTCTGATTTCCTTAAATTTGCATATTCATACGTTTTTCGTGTATGTTTTAAATTTATCGTTATTTGGGAATCGGGGGTACAGAGAAAGAGCTGTTTACAATGCACATTATCGGGTTTTTCGGTTTGAACATATAAGGACCCAAATCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTGCTAGGGGAAGGTTTCCACACCTTTATAAATGGTGATTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACACCCCCCTTCGGGGCCCAGCGTGGACGCTGGCACTTTTTCCTTCCTCCAATCGATGTGGGACTGCCCCCAAATCCACCCCTCTTTGGGGCCCAACGTCCTTACTGGCACCCCGCCTCGTGTCTCCCCCCCACCCCCCCTCGGGGAACAGCGAGAAGGCTGGCACATTGTTCGGAACCTGGCTCTGATACCATTTGTAAAGACCCAAATCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGCTTTAAATGCGTCTGCTAGGGGAAGGTTTCCACACCTTTATAAATGGTGATTTGTTCTCCCCCCAACCAATGTGGGACATCACAATGAGGGCAACAAAGAGATGGAACATGAGCCCGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGATCTGGGCCGTTACAAATGGTATCAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCGCTGTTCCCCAAAGGGAGGTAGACACGAGGCGGTGTGCCAGTAAGGACACTGGCCCAAAACGGGGGTGGATTTGGGGGCGGTTCCACATCGATTGGAGGAAGGAAAGAGCGCCAGCGAGGACGCTGGGCCCCAAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGAAAACCTTCCCCTAGCAGACGCATTTTAAAGCCTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGGATCTGAGCCGTTACAGAACATGTGAGAAATATGCATAGTATTTCATAGGTCAGATTACACGATTTCAATTATACATGGTCAAGCTGTCACCATGCCATTTCTTAATACAAGAACGTTTTGCATTTTGTTTCTCGCTTTGAGATATTTGATTACATAAAATGCAGCAAGATGACCTTCATAATATGTTCTTTTGGCATGAACAGAAGACTGTAAAAACTCGTGGTTGTCCCATGATTTCGTGGTCTTGATTTCGCTCTGCCTGTTATCTTTCTGCTCTGTCTTTGGTTGTGTCTGATATAGGCTTCCTGCATATTTGTCTCTGCTAGATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGTAGGATCTTCTTCTGGTATCCTCTAAGCTCAACTCGTTTCTGGAATGTGGCTTGTTTTAGTTTACGTTTCTTCTTTGAATGATAAGTTGAGCTGCATGACTTCCCCCAAAAGTTGTCATTGGTACTATCATTCTCTGTTTGAATCAGTACAAATAACAATTCACAAGAGGAAAAGGTTGTAAGATAGGAAGAAATTCATTTTGAATATCTGTTTGCTTCTCACTTTGCAATGTATGGATATTTTGTTCTATCCGTTTTAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGTATTCCTCGTCCAAATTTGATAGCTTCCTAAATTACTTCTTCAAACTCTTGTAACTCATTTGAAGAATCCAATGTCCAGGAGGCTGTAGAACACGCAAAAGCAACGGGTCATGTCAACTTTCAGGAGTATAGATGACATGAGGAATGTTGGGAAAAATAATTGGCTGATCGGTTTGAGCTTTATCGACTCCTCCGATTGTTGAAGTACTGTGGCGTTCTGATTGTTGTAAGCTTATAGTACCTTTCGAAATCTTGATTGTCCAGGAAAGTGTCACATTTACTGACCAGAATGTTGTGTATTAGATTCAATAATCACAGAACAAAATCCGGCTGTTTTCCCAAGTGACTGAGCTTTTCTAATAGCAGTGATGTTTCC

mRNA sequence

ATGGTGGGGACACTTTCGATTCGCCTCGAGCGCCTTCATGTAATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGTTATGTTATGGACCACGACAAAGGCAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATACTATCTGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACAACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGTATTCCTCGTCCAAATTTGATAGCTTCCTAAATTACTTCTTCAAACTCTTGTAACTCATTTGAAGAATCCAATGTCCAGGAGGCTGTAGAACACGCAAAAGCAACGGGTCATGTCAACTTTCAGGAGTATAGATGACATGAGGAATGTTGGGAAAAATAATTGGCTGATCGGTTTGAGCTTTATCGACTCCTCCGATTGTTGAAGTACTGTGGCGTTCTGATTGTTGTAAGCTTATAGTACCTTTCGAAATCTTGATTGTCCAGGAAAGTGTCACATTTACTGACCAGAATGTTGTGTATTAGATTCAATAATCACAGAACAAAATCCGGCTGTTTTCCCAAGTGACTGAGCTTTTCTAATAGCAGTGATGTTTCC

Coding sequence (CDS)

ATGGTGGGGACACTTTCGATTCGCCTCGAGCGCCTTCATGTAATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGTTATGTTATGGACCACGACAAAGGCAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATACTATCTGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACAACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGTATTCCTCGTCCAAATTTGA

Protein sequence

MVGTLSIRLERLHVIFTHTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQIGVIGQTVFLVQI

Homology

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BLAST of Carg05626 vs. NCBI nr
Match: XP_022981609.1 (ubiquitin thioesterase OTU1 [Cucurbita maxima] >XP_022981610.1 ubiquitin thioesterase OTU1 [Cucurbita maxima])

HSP 1 Score: 388.7 bits (997), Expect = 1.3e-104
Identity = 187/190 (98.42%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEGT+LRRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGKPNE
Sbjct: 1   MEGTILRRVIPSDNSCLFNAVGYVMDHDKDKATELRQVIAATVASDPTRYSEAFLGKPNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH
Sbjct: 61  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTD ANFTLRCG
Sbjct: 121 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDTANFTLRCG 180

Query: 200 VCQIGVIGQT 210
           VCQIGVIGQT
Sbjct: 181 VCQIGVIGQT 190

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BLAST of Carg05626 vs. NCBI nr
Match: XP_022940162.1 (ubiquitin thioesterase OTU1 [Cucurbita moschata] >XP_022940163.1 ubiquitin thioesterase OTU1 [Cucurbita moschata])

HSP 1 Score: 386.0 bits (990), Expect = 8.6e-104
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEGTVLRRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGKPNE
Sbjct: 1   MEGTVLRRVIPSDNSCLFNAVGYVMDHDKDKATELRQVIAATVASDPTRYSEAFLGKPNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH
Sbjct: 61  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDALVMSPFEGAPEEFDQTIFS NRDRS GPIEEQALHFVKEQQRKRSFTDAANFTLRCG
Sbjct: 121 YDALVMSPFEGAPEEFDQTIFSENRDRSSGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 180

Query: 200 VCQIGVIGQT 210
           VCQIGVIGQT
Sbjct: 181 VCQIGVIGQT 190

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BLAST of Carg05626 vs. NCBI nr
Match: XP_023521588.1 (ubiquitin thioesterase OTU1 [Cucurbita pepo subsp. pepo] >XP_023521595.1 ubiquitin thioesterase OTU1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 1.5e-103
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEGT+LRRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGKPNE
Sbjct: 1   MEGTILRRVIPSDNSCLFNAVGYVMDHDKDKATELRQVIAATVASDPTRYSEAFLGKPNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH
Sbjct: 61  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDALVMSPFEGAPEEFDQTIFSVNR+RSIGPIEE+ALHFVKEQQRKRSFTD ANFTLRCG
Sbjct: 121 YDALVMSPFEGAPEEFDQTIFSVNRNRSIGPIEERALHFVKEQQRKRSFTDTANFTLRCG 180

Query: 200 VCQIGVIGQT 210
           VCQIGVIGQT
Sbjct: 181 VCQIGVIGQT 190

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BLAST of Carg05626 vs. NCBI nr
Match: XP_022936182.1 (ubiquitin thioesterase OTU1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 374.4 bits (960), Expect = 2.6e-100
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 18  HTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKP 77
           +TMEGT+LRRVIPSDNSCLFNAVGYVMDHDK KA ELRQVIAATVASDPTRY EAFLGKP
Sbjct: 27  YTMEGTILRRVIPSDNSCLFNAVGYVMDHDKHKAAELRQVIAATVASDPTRYCEAFLGKP 86

Query: 78  NEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDG 137
           NEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQT RCDLYGQEKKYSERVLLIYDG
Sbjct: 87  NEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTKRCDLYGQEKKYSERVLLIYDG 146

Query: 138 LHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLR 197
           LHYDALVMSP EGAPEEFDQTIFSVNRDR+IGPIE QALHFV+EQQRKR FTD ANFTLR
Sbjct: 147 LHYDALVMSPSEGAPEEFDQTIFSVNRDRTIGPIEGQALHFVEEQQRKRRFTDTANFTLR 206

Query: 198 CGVCQIGVIGQT 210
           CGVCQIGVIGQT
Sbjct: 207 CGVCQIGVIGQT 218

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BLAST of Carg05626 vs. NCBI nr
Match: KGN44158.1 (hypothetical protein Csa_7G209540 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 5.8e-100
Identity = 178/192 (92.71%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 17  THTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGK 76
           T+TMEG ++RRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGK
Sbjct: 100 TYTMEGAIIRRVIPSDNSCLFNAVGYVMDHDKLKATELRQVIAATVASDPTRYSEAFLGK 159

Query: 77  PNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYD 136
           PNEEYC+WILDSEKWGGAIELSILSEYYGREIAAYDIQT RCDLYGQEK+YSERVLLIYD
Sbjct: 160 PNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTARCDLYGQEKRYSERVLLIYD 219

Query: 137 GLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTL 196
           GLHYDALVMSP E APEEFDQTIFSVNRDR+IGPIEEQALHFVK+QQRKR FTD ANFTL
Sbjct: 220 GLHYDALVMSPAEDAPEEFDQTIFSVNRDRTIGPIEEQALHFVKDQQRKRRFTDTANFTL 279

Query: 197 RCGVCQIGVIGQ 209
           RCGVCQIGVIGQ
Sbjct: 280 RCGVCQIGVIGQ 291

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BLAST of Carg05626 vs. TAIR10
Match: AT1G50670.1 (OTU-like cysteine protease family protein)

HSP 1 Score: 314.3 bits (804), Expect = 5.8e-86
Identity = 147/189 (77.78%), Postives = 167/189 (88.36%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEG ++RRVIPSDNSCLFNA+GYVMD DK KA ELRQVIAA VAS+  +Y+EAFLGK NE
Sbjct: 1   MEGIIVRRVIPSDNSCLFNAIGYVMDKDKNKAPELRQVIAAAVASNKEKYNEAFLGKLNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYCAWIL+ +KWGGAIELSIL++YYGREIAAYDIQT+RCDLYGQ + Y ERV+LIYDGLH
Sbjct: 61  EYCAWILNPDKWGGAIELSILADYYGREIAAYDIQTSRCDLYGQTRNYDERVMLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDAL +SPFEGA E+FD TI+ V +DRSIG IE  AL+ VK+QQRKRS+TD ANFTLRCG
Sbjct: 121 YDALALSPFEGAEEDFDMTIYPVGKDRSIGSIEGLALNLVKDQQRKRSYTDTANFTLRCG 180

Query: 200 VCQIGVIGQ 209
           VCQIGVIGQ
Sbjct: 181 VCQIGVIGQ 189

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BLAST of Carg05626 vs. Swiss-Prot
Match: sp|Q567B1|OTU1_DANRE (Ubiquitin thioesterase OTU1 OS=Danio rerio OX=7955 GN=yod1 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-47
Identity = 101/189 (53.44%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 24  VLRRVIPSDNSCLFNAVGYVMD---HDKGKATELRQVIAATVASDPTRYSEAFLGKPNEE 83
           V RRV+P+DNSCLF +V YVM+   +D   A+E+R +IA  VASDPT YSEA LGK NEE
Sbjct: 102 VERRVVPADNSCLFTSVNYVMEGGVYDPACASEMRGLIAQIVASDPTAYSEAVLGKTNEE 161

Query: 84  YCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHY 143
           YC WI   + WGGAIE+SILS++Y  EI   D QT R D +G++  Y++RVLLIYDG+HY
Sbjct: 162 YCTWIRRDDTWGGAIEVSILSKFYQCEICVVDTQTVRVDRFGEDAGYTKRVLLIYDGIHY 221

Query: 144 DAL-VMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 203
           D L  + P    P    QT+FS   D     I  QAL    E +RKR FTD   F LRC 
Sbjct: 222 DPLQKVLPGSDVPA---QTVFSTVDD----VILAQALELADEARRKRQFTDVNRFALRCM 281

Query: 204 VCQIGVIGQ 209
           VCQ G++GQ
Sbjct: 282 VCQTGLVGQ 283

[Close]

BLAST of Carg05626 vs. Swiss-Prot
Match: sp|Q5F3A6|OTU1_CHICK (Ubiquitin thioesterase OTU1 OS=Gallus gallus OX=9031 GN=YOD1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.3e-46
Identity = 99/187 (52.94%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 26  RRVIPSDNSCLFNAVGYVMD---HDKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYC 85
           RRV+P+DNSCLF +V YV++   +D G A E+R +IA  VASDP  Y EA LGK N EYC
Sbjct: 105 RRVVPADNSCLFTSVYYVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNREYC 164

Query: 86  AWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDA 145
            WI   E WGGAIE+SILS++Y  EI   D QT R D +G++  Y++RVLLIYDG+HYD 
Sbjct: 165 EWIRREETWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDP 224

Query: 146 LVMS-PFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVC 205
           L    P    P    QTIFS   D     +  QAL    E +RKR FTD   FTLRC VC
Sbjct: 225 LERKIPDSDVP---PQTIFSTTDD----VVLAQALELADEARRKRQFTDVNRFTLRCMVC 284

Query: 206 QIGVIGQ 209
           Q G+ GQ
Sbjct: 285 QKGLTGQ 284

[Close]

BLAST of Carg05626 vs. Swiss-Prot
Match: sp|Q0IH43|OTU1_XENLA (Ubiquitin thioesterase OTU1 OS=Xenopus laevis OX=8355 GN=yod1 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-43
Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 23  TVLRRVIPSDNSCLFNAVGYVMD---HDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 82
           T++RRV+P+DNSCLF ++ YV++   +D   A E+R +IA  VASD + Y +A LGK NE
Sbjct: 104 TIVRRVVPADNSCLFTSIYYVVEGGVYDPACALEMRSLIAEIVASDQSAYCDAVLGKSNE 163

Query: 83  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 142
           EYC+WI   + WGGAIE+SILS++Y  EI   D QT R D +G++  Y++RVLLIYDG+H
Sbjct: 164 EYCSWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDSGYTKRVLLIYDGIH 223

Query: 143 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 202
           YD L    F   P+    T+FS   D ++     QA+    + ++KR FTD   F LRC 
Sbjct: 224 YDPL-QRQFPD-PDMPPMTVFSTTDDEAL----VQAMELADDARKKRQFTDVNQFALRCM 283

Query: 203 VCQIGVIGQT 210
            CQ G+ GQ+
Sbjct: 284 ACQKGLTGQS 287

[Close]

BLAST of Carg05626 vs. Swiss-Prot
Match: sp|Q5VVQ6|OTU1_HUMAN (Ubiquitin thioesterase OTU1 OS=Homo sapiens OX=9606 GN=YOD1 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-43
Identity = 94/186 (50.54%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 26  RRVIPSDNSCLFNAVGYVMDH---DKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYC 85
           R V+P+DNSCLF +V YV++    +   A E+R++IA  VASDP  YSEA LGK N+EYC
Sbjct: 151 RTVVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYC 210

Query: 86  AWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDA 145
            WI   + WGGAIE+SILS++Y  EI   D QT R D +G++  Y++RVLLIYDG+HYD 
Sbjct: 211 DWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDP 270

Query: 146 LVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQ 205
           L  +  +  P+    TIFS N D     +  QAL    E +R+R FTD   FTLRC VCQ
Sbjct: 271 LQRNFPD--PDTPPLTIFSSNDD----IVLVQALELADEARRRRQFTDVNRFTLRCMVCQ 330

Query: 206 IGVIGQ 209
            G+ GQ
Sbjct: 331 KGLTGQ 330

[Close]

BLAST of Carg05626 vs. Swiss-Prot
Match: sp|Q8CB27|OTU1_MOUSE (Ubiquitin thioesterase OTU1 OS=Mus musculus OX=10090 GN=Yod1 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-43
Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 26  RRVIPSDNSCLFNAVGYVMDH---DKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYC 85
           R  +P+DNSCLF +V YV++    +   A E+R++IA  VASDP  YSEA LGK NE+YC
Sbjct: 146 RTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPVLYSEAILGKTNEDYC 205

Query: 86  AWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDA 145
            WI   + WGGAIE+SILS++Y  EI   D QT R D +G++  Y++RVLLIYDG+HYD 
Sbjct: 206 DWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDP 265

Query: 146 LVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQ 205
           L  +  +  P+    TIFS N D     +  QAL    E +RKR FTD   FTLRC +CQ
Sbjct: 266 LQRNFPD--PDTPPLTIFSSNDD----IVLVQALELADEARRKRQFTDVNRFTLRCMICQ 325

Query: 206 IGVIGQ 209
            G+ GQ
Sbjct: 326 KGLTGQ 325

[Close]

BLAST of Carg05626 vs. TrEMBL
Match: tr|A0A0A0K3S3|A0A0A0K3S3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209540 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100
Identity = 178/192 (92.71%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 17  THTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGK 76
           T+TMEG ++RRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGK
Sbjct: 100 TYTMEGAIIRRVIPSDNSCLFNAVGYVMDHDKLKATELRQVIAATVASDPTRYSEAFLGK 159

Query: 77  PNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYD 136
           PNEEYC+WILDSEKWGGAIELSILSEYYGREIAAYDIQT RCDLYGQEK+YSERVLLIYD
Sbjct: 160 PNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTARCDLYGQEKRYSERVLLIYD 219

Query: 137 GLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTL 196
           GLHYDALVMSP E APEEFDQTIFSVNRDR+IGPIEEQALHFVK+QQRKR FTD ANFTL
Sbjct: 220 GLHYDALVMSPAEDAPEEFDQTIFSVNRDRTIGPIEEQALHFVKDQQRKRRFTDTANFTL 279

Query: 197 RCGVCQIGVIGQ 209
           RCGVCQIGVIGQ
Sbjct: 280 RCGVCQIGVIGQ 291

[Close]

BLAST of Carg05626 vs. TrEMBL
Match: tr|A0A1S3BHI7|A0A1S3BHI7_CUCME (ubiquitin thioesterase OTU1 OS=Cucumis melo OX=3656 GN=LOC103490144 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.9e-99
Identity = 176/189 (93.12%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEGT++RRVIPSDNSCLFNAVGYVMDHDK KATELRQVIAATVASDPTRYSEAFLGKPNE
Sbjct: 1   MEGTIIRRVIPSDNSCLFNAVGYVMDHDKHKATELRQVIAATVASDPTRYSEAFLGKPNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYC+WILDSEKWGGAIELSILSEYYGREIAAYDIQT RCDLYGQEK+YSERVLLIYDGLH
Sbjct: 61  EYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTARCDLYGQEKRYSERVLLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDALVMSP E APEEFDQTIFSVNRDR+IGPIEEQALHFVK+QQRKR FTD ANFTLRCG
Sbjct: 121 YDALVMSPAEDAPEEFDQTIFSVNRDRTIGPIEEQALHFVKDQQRKRRFTDTANFTLRCG 180

Query: 200 VCQIGVIGQ 209
           VCQIGV+GQ
Sbjct: 181 VCQIGVVGQ 189

[Close]

BLAST of Carg05626 vs. TrEMBL
Match: tr|A0A1U8QBT6|A0A1U8QBT6_NELNU (ubiquitin thioesterase OTU1 OS=Nelumbo nucifera OX=4432 GN=LOC104610922 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 4.1e-94
Identity = 167/189 (88.36%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEG V+RRVIPSDNSCLFNAVGYVMDHDK KA ELRQVIAATVASDPT+YSEAFLGKPNE
Sbjct: 1   MEGIVVRRVIPSDNSCLFNAVGYVMDHDKHKAPELRQVIAATVASDPTKYSEAFLGKPNE 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYCAWIL+S+KWGGAIELSIL+EYYGREIAA+DIQTTRCDLYGQE KY+ERV+LIYDGLH
Sbjct: 61  EYCAWILNSDKWGGAIELSILAEYYGREIAAFDIQTTRCDLYGQEMKYAERVMLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDAL MSPF GAPEEFDQTIF+V RDR+IGPIEE AL FVK+QQRKRS+TD ANFTLRCG
Sbjct: 121 YDALAMSPFNGAPEEFDQTIFTVQRDRTIGPIEELALDFVKDQQRKRSYTDTANFTLRCG 180

Query: 200 VCQIGVIGQ 209
           VCQIGVIGQ
Sbjct: 181 VCQIGVIGQ 189

[Close]

BLAST of Carg05626 vs. TrEMBL
Match: tr|A0A1R3KBG3|A0A1R3KBG3_9ROSI (Ovarian tumor, otubain OS=Corchorus olitorius OX=93759 GN=COLO4_09662 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92
Identity = 164/189 (86.77%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           MEG V+RRVIPSDNSCLFNAVGYVMDHDK KA ELRQVIAATVASDPT+YSEAFLGKPN 
Sbjct: 1   MEGIVVRRVIPSDNSCLFNAVGYVMDHDKTKAPELRQVIAATVASDPTKYSEAFLGKPNA 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYC+WILDSEKWGGAIELSIL++YYGREIAAYDIQT RCDLYGQE+ YSERV+LIYDGLH
Sbjct: 61  EYCSWILDSEKWGGAIELSILADYYGREIAAYDIQTARCDLYGQERNYSERVMLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDAL MSPFEGAPEEFDQTIF+V +DR+IGPIE  AL+ VK+QQRKRS+TD ANFTLRCG
Sbjct: 121 YDALAMSPFEGAPEEFDQTIFAVQKDRTIGPIEGLALNLVKDQQRKRSYTDTANFTLRCG 180

Query: 200 VCQIGVIGQ 209
           VCQIGVIGQ
Sbjct: 181 VCQIGVIGQ 189

[Close]

BLAST of Carg05626 vs. TrEMBL
Match: tr|A0A1R3IDI7|A0A1R3IDI7_COCAP (Ovarian tumor, otubain OS=Corchorus capsularis OX=210143 GN=CCACVL1_12834 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.9e-92
Identity = 163/189 (86.24%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 20  MEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNE 79
           M+G V+RRVIPSDNSCLFNAVGYVMDHDK KA ELRQVIAATVASDPT+YSEAFLGKPN 
Sbjct: 1   MDGIVVRRVIPSDNSCLFNAVGYVMDHDKTKAPELRQVIAATVASDPTKYSEAFLGKPNA 60

Query: 80  EYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLH 139
           EYC+WILDSEKWGGAIELSIL++YYGREIAAYDIQT RCDLYGQE+ YSERV+LIYDGLH
Sbjct: 61  EYCSWILDSEKWGGAIELSILADYYGREIAAYDIQTARCDLYGQERNYSERVMLIYDGLH 120

Query: 140 YDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCG 199
           YDAL MSPFEGAPEEFDQTIF+V +DR+IGPIE  AL+ VK+QQRKRS+TD ANFTLRCG
Sbjct: 121 YDALAMSPFEGAPEEFDQTIFAVQKDRTIGPIEGLALNLVKDQQRKRSYTDTANFTLRCG 180

Query: 200 VCQIGVIGQ 209
           VCQIGVIGQ
Sbjct: 181 VCQIGVIGQ 189

The following BLAST results are available for this feature:

BLAST of Carg05626 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981609.1	1.3e-104	98.42	ubiquitin thioesterase OTU1 [Cucurbita maxima] >XP_022981610.1 ubiquitin thioest...	[more]
XP_022940162.1	8.6e-104	98.42	ubiquitin thioesterase OTU1 [Cucurbita moschata] >XP_022940163.1 ubiquitin thioe...	[more]
XP_023521588.1	1.5e-103	97.37	ubiquitin thioesterase OTU1 [Cucurbita pepo subsp. pepo] >XP_023521595.1 ubiquit...	[more]
XP_022936182.1	2.6e-100	93.75	ubiquitin thioesterase OTU1-like isoform X1 [Cucurbita moschata]	[more]
KGN44158.1	5.8e-100	92.71	hypothetical protein Csa_7G209540 [Cucumis sativus]	[more]

BLAST of Carg05626 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50670.1	5.8e-86	77.78	OTU-like cysteine protease family protein	[more]

BLAST of Carg05626 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q567B1\|OTU1_DANRE	2.3e-47	53.44	Ubiquitin thioesterase OTU1 OS=Danio rerio OX=7955 GN=yod1 PE=2 SV=1	[more]
sp\|Q5F3A6\|OTU1_CHICK	7.3e-46	52.94	Ubiquitin thioesterase OTU1 OS=Gallus gallus OX=9031 GN=YOD1 PE=2 SV=1	[more]
sp\|Q0IH43\|OTU1_XENLA	2.6e-43	46.84	Ubiquitin thioesterase OTU1 OS=Xenopus laevis OX=8355 GN=yod1 PE=2 SV=1	[more]
sp\|Q5VVQ6\|OTU1_HUMAN	4.4e-43	50.54	Ubiquitin thioesterase OTU1 OS=Homo sapiens OX=9606 GN=YOD1 PE=1 SV=1	[more]
sp\|Q8CB27\|OTU1_MOUSE	4.4e-43	50.00	Ubiquitin thioesterase OTU1 OS=Mus musculus OX=10090 GN=Yod1 PE=1 SV=1	[more]

BLAST of Carg05626 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3S3\|A0A0A0K3S3_CUCSA	3.8e-100	92.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209540 PE=4 SV=1	[more]
tr\|A0A1S3BHI7\|A0A1S3BHI7_CUCME	1.9e-99	93.12	ubiquitin thioesterase OTU1 OS=Cucumis melo OX=3656 GN=LOC103490144 PE=4 SV=1	[more]
tr\|A0A1U8QBT6\|A0A1U8QBT6_NELNU	4.1e-94	88.36	ubiquitin thioesterase OTU1 OS=Nelumbo nucifera OX=4432 GN=LOC104610922 PE=4 SV=...	[more]
tr\|A0A1R3KBG3\|A0A1R3KBG3_9ROSI	1.3e-92	86.77	Ovarian tumor, otubain OS=Corchorus olitorius OX=93759 GN=COLO4_09662 PE=4 SV=1	[more]
tr\|A0A1R3IDI7\|A0A1R3IDI7_COCAP	2.9e-92	86.24	Ovarian tumor, otubain OS=Corchorus capsularis OX=210143 GN=CCACVL1_12834 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:1904265	ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol
GO:0004843	thiol-dependent ubiquitin-specific protease activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016579	protein deubiquitination
GO:0030433	ER-associated ubiquitin-dependent protein catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR038765	Papain_like_cys_pep_sf
IPR039138	OTU1
IPR003323	OTU_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030433	ER-associated ubiquitin-dependent protein catabolic process
biological_process	GO:0016579	protein deubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:1904265	ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol
molecular_function	GO:0004843	thiol-dependent ubiquitin-specific protease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05626-RA	Carg05626-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003323	OTU domain	PFAM	PF02338	OTU	coord: 31..126 e-value: 1.7E-6 score: 28.5
IPR003323	OTU domain	PROSITE	PS50802	OTU	coord: 24..146 score: 11.487
None	No IPR available	GENE3D	G3DSA:3.90.70.80		coord: 11..192 e-value: 6.6E-66 score: 223.6
None	No IPR available	PANTHER	PTHR13312:SF0	UBIQUITIN THIOESTERASE OTU1	coord: 22..209
IPR039138	Ubiquitin thioesterase OTU1	PANTHER	PTHR13312	HIV-INDUCED PROTEIN-7-LIKE PROTEASE	coord: 22..209
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	SSF54001	Cysteine proteinases	coord: 26..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05626	CmaCh09G009540	Cucurbita maxima (Rimu)	carcmaB1407
Carg05626	CmaCh01G011310	Cucurbita maxima (Rimu)	carcmaB1410
Carg05626	CmoCh09G009520	Cucurbita moschata (Rifu)	carcmoB1364
Carg05626	CmoCh01G011810	Cucurbita moschata (Rifu)	carcmoB1367
Carg05626	Cp4.1LG02g01030	Cucurbita pepo (Zucchini)	carcpeB1420
Carg05626	Cp4.1LG06g08870	Cucurbita pepo (Zucchini)	carcpeB1422

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05626	Carg12821	Silver-seed gourd	carcarB641

The following block(s) are covering this gene:

None