Carg05601 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05601
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATPase, vacuolar ER assembly factor, Vma12
Location	Cucurbita_argyrosperma_scaffold_046 : 1567926 .. 1569734 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAACGACCAGGCGCATCCGTCTGGTCTTGTCATAGCTCACACCGAAGCTATTCGCTCATTTCTGACCTCGGCGTCGATAGACTCACGAATTTCTGAGGAACTCCGGCAGCTTGCTTCAAATCTCGCTTCACAATGAACTAAGAACACACAATTTAGTACCTCTACGACCATGCTAATGATGTCATTCATGTCCTGAATCCCTTCAATCTAGGCATGATTTGGGCCAAGTTGAACTTGACATGGATATGAACTAAGAACACACAATTTAGTACCTCTACGACCATGCTAATGATGTCATTCATGTCCTGAATCCCTTCAATCTAGGCATGACTTGGGGCAAGTTGTATTAGAAGATTGAGCCTTTGAACCACGTTTATGGGAATCCAAACTGACTTTTTATGCTGAAATGTTAAAACTTCCACGTTCGAGTACTTTTGGTAGAACATATTTTTTCTTGTGGGCTTGTTAACTTATTGCTATGTGTATACAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATCGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTTGGGTTCGGTATGTATGCAACCTTGTCGTTTTACGTTGCCGATATATACCGATTTACTTTTTATGATATACTCAAATATGAGCGGATTTTTTGTATAAGATAAAATTGAATGTAGTTTTATGAATTAACATGGTCTTGTCATATTTTACAAAACAGAGATTTATCATCAAGAAAATTTTTATTAATTTTAAATATGGGTATTACAAGATCGTCGGAATCGGTACATCTCATGAACGTTTTACTTGAATTCTTGCAGTTTTATGAAATAATATGGTCTTGTCATATTTTACAAAACAGAGATTTATCATCAATAAATCTTTGTTATGTGATTTGTTGATAATTTTTAATATCTGTATTACAAGATCGTCTGAGTCGGTACATGTCATGAACGTTTTACTTGAACTGTTGTAGTTTTATGAAATAATATGGTCTTGTCATATTTTACAAAACAGAGATTTATCATCAACGAAATCTTTATTATGTGATTTGTTGATAATTTTTAATATTGGTATTACAAGATCGTTTGAATCGGTACATCTCATGAACGTTTTACTTGAACTCTTGTAATTCTGAACTTTGTTTGTAACCTTTGAAATCTGTCGTATCATATGGTTCTTTCTTGTGTTCTGTTGCCTTCTGAACGACAATATTTAACAAGCCACGAGGTTGTTGCAGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATGCTTTATTCCGAGCATTGTTTAGGCACGATCCGATCATGGTATTTATTGAATATCTGTTTAATCTTCAAGCAAACTTGTTAATTTCTGATTCTCATGGTACTGTTATTTACTGGGCATCAAATTTTGTTTCTCAGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTCGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAGAGTTACTTCTCTTGAGGTTTGCTTTCTTTCTACTTAAATTGAACCTATTAGGTTAGCTTTTACCCTATGTTGTGGATCAAAGTAATAAGGGCCTTGCTAATGTGCTTGCTGTAATTTGTTTGTATAAAGTCGTGTTCTTCTGGTGAAGAACATCAAAAGAATTGAGATCCGATTGTTCATCTCAGGAGATGAAT

mRNA sequence

ATGATCAACGACCAGGCGCATCCGTCTGGTCTTAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATCGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTTGGGTTCGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATGCTTTATTCCGAGCATTGTTTAGGCACGATCCGATCATGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTCGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAGAGTTACTTCTCTTGAGGTTTGCTTTCTTTCTACTTAAATTGAACCTATTAGGTTAGCTTTTACCCTATGTTGTGGATCAAAGTAATAAGGGCCTTGCTAATGTGCTTGCTGTAATTTGTTTGTATAAAGTCGTGTTCTTCTGGTGAAGAACATCAAAAGAATTGAGATCCGATTGTTCATCTCAGGAGATGAAT

Coding sequence (CDS)

ATGATCAACGACCAGGCGCATCCGTCTGGTCTTAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCGGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAGGATATCGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTTGGGTTCGGTTTACACGTCGTGTTGATAATGTTTACGGGCTATCTTGTTGGATATGCTTTATTCCGAGCATTGTTTAGGCACGATCCGATCATGAGTGCTGCTGGAGGTATCCTTGGATTGGTTTTCGGCATGCTCGTAGAAACACTTCTTTTCATTATTCGAGCATCCAGTTACGATAATCGATCTTCATCGTCTTCCCGTTCTAAGCTAAAGAAGAATCAGTAG

Protein sequence

MINDQAHPSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKKNQ

Homology

[Close]

BLAST of Carg05601 vs. NCBI nr
Match: XP_022959366.1 (uncharacterized protein LOC111460360 [Cucurbita moschata])

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-55
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK
Sbjct: 145 GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           NQ
Sbjct: 205 NQ 206

[Close]

BLAST of Carg05601 vs. NCBI nr
Match: XP_023548168.1 (uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-55
Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKP+DEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPVDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK
Sbjct: 145 GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           NQ
Sbjct: 205 NQ 206

[Close]

BLAST of Carg05601 vs. NCBI nr
Match: XP_023006665.1 (uncharacterized protein LOC111499322 [Cucurbita maxima])

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54
Identity = 117/122 (95.90%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLK LADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKNLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK
Sbjct: 145 GYLVGYTLFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           NQ
Sbjct: 205 NQ 206

[Close]

BLAST of Carg05601 vs. NCBI nr
Match: XP_004138504.1 (PREDICTED: uncharacterized protein LOC101222938 [Cucumis sativus] >KGN45655.1 hypothetical protein Csa_6G003470 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-54
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRSKLKK
Sbjct: 145 GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           +Q
Sbjct: 205 SQ 206

[Close]

BLAST of Carg05601 vs. NCBI nr
Match: XP_008458236.1 (PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458238.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458239.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 8.4e-54
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRSKLKK
Sbjct: 145 GYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           +Q
Sbjct: 205 SQ 206

[Close]

BLAST of Carg05601 vs. TAIR10
Match: AT5G52980.1 (ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013))

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-37
Identity = 81/112 (72.32%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELK RL KL ++AERK Y ELVKDI PKK ++EPFSSYKDQLGFGLHV L MFT
Sbjct: 86  PREKSEELKLRLVKLREIAERKEYAELVKDITPKKQVEEPFSSYKDQLGFGLHVGLTMFT 145

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSS 120
           GYLVGYA FRALF  +P +SAAGGILGLV  MLVETLLFII+ S  D   SS
Sbjct: 146 GYLVGYASFRALFNRNPALSAAGGILGLVLAMLVETLLFIIKTSKDDQIQSS 197

[Close]

BLAST of Carg05601 vs. TrEMBL
Match: tr|A0A0A0K7F5|A0A0A0K7F5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRSKLKK
Sbjct: 145 GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           +Q
Sbjct: 205 SQ 206

[Close]

BLAST of Carg05601 vs. TrEMBL
Match: tr|A0A1S3C6X8|A0A1S3C6X8_CUCME (uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.5e-54
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRSKLKK
Sbjct: 145 GYLLGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKK 204

Query: 128 NQ 130
           +Q
Sbjct: 205 SQ 206

[Close]

BLAST of Carg05601 vs. TrEMBL
Match: tr|B9GZ94|B9GZ94_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G093800v3 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-42
Identity = 96/122 (78.69%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARL+KL ++AERKAY ELVKDI P+K  DEPFSSYKDQ+GFGLHVVLIMFT
Sbjct: 86  PREKSEELKARLRKLEEMAERKAYAELVKDITPRKNTDEPFSSYKDQMGFGLHVVLIMFT 145

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYA FRALF H P MSAAGGILGLVFGMLVET LFIIR S+ D RSS+ + SKLKK
Sbjct: 146 GYLVGYAAFRALFGHSPAMSAAGGILGLVFGMLVETFLFIIRTSNPDPRSSTPNTSKLKK 205

Query: 128 NQ 130
           NQ
Sbjct: 206 NQ 207

[Close]

BLAST of Carg05601 vs. TrEMBL
Match: tr|D7TTV3|D7TTV3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g01580 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.2e-41
Identity = 93/122 (76.23%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELK RL+KLAD+AER AY+ELVKDI PKK  DEPF+SYKDQLGFGLHVV+ MF+
Sbjct: 86  PREKSEELKLRLRKLADMAERNAYEELVKDITPKKTTDEPFASYKDQLGFGLHVVVTMFS 145

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYA FRALF H+P+M+AAGGILGLV  MLVETLLFIIR SS+D RSSSS+ S++KK
Sbjct: 146 GYLVGYAAFRALFSHNPVMNAAGGILGLVCAMLVETLLFIIRTSSHDLRSSSST-SRMKK 205

Query: 128 NQ 130
           NQ
Sbjct: 206 NQ 206

[Close]

BLAST of Carg05601 vs. TrEMBL
Match: tr|A0A2N9GAM4|A0A2N9GAM4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24301 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 93/122 (76.23%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 8   PSGLSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFT 67
           P   SEELKARLKKL ++AE+ AY+ELVKDI PKK + EPFSSYKDQLGFGLHVVLIMFT
Sbjct: 85  PREKSEELKARLKKLEELAEKHAYEELVKDIIPKKDVTEPFSSYKDQLGFGLHVVLIMFT 144

Query: 68  GYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRASSYDNRSSSSSRSKLKK 127
           GYLVGYA FRALF + P+M+AAGGILGLV GMLVETLLFIIR S+ D RSS+ + S+LKK
Sbjct: 145 GYLVGYAAFRALFDNSPVMNAAGGILGLVGGMLVETLLFIIRTSNQDRRSSAVA-SQLKK 204

Query: 128 NQ 130
           NQ
Sbjct: 205 NQ 205

The following BLAST results are available for this feature:

BLAST of Carg05601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959366.1	2.0e-55	97.54	uncharacterized protein LOC111460360 [Cucurbita moschata]	[more]
XP_023548168.1	2.6e-55	96.72	uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]	[more]
XP_023006665.1	2.2e-54	95.90	uncharacterized protein LOC111499322 [Cucurbita maxima]	[more]
XP_004138504.1	3.8e-54	95.08	PREDICTED: uncharacterized protein LOC101222938 [Cucumis sativus] >KGN45655.1 hy...	[more]
XP_008458236.1	8.4e-54	94.26	PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo] >XP_008458237.1 P...	[more]

BLAST of Carg05601 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52980.1	1.3e-37	72.32	ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013)	[more]

BLAST of Carg05601 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05601 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7F5\|A0A0A0K7F5_CUCSA	2.5e-54	95.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003470 PE=4 SV=1	[more]
tr\|A0A1S3C6X8\|A0A1S3C6X8_CUCME	5.5e-54	94.26	uncharacterized protein LOC103497719 OS=Cucumis melo OX=3656 GN=LOC103497719 PE=...	[more]
tr\|B9GZ94\|B9GZ94_POPTR	1.7e-42	78.69	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G093800v3 PE=...	[more]
tr\|D7TTV3\|D7TTV3_VITVI	9.2e-41	76.23	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g01580 PE=4 SV=...	[more]
tr\|A0A2N9GAM4\|A0A2N9GAM4_FAGSY	1.0e-39	76.23	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24301 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR021013	ATPase_Vma12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05601-RA	Carg05601-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021013	ATPase, vacuolar ER assembly factor, Vma12	PANTHER	PTHR31394	FAMILY NOT NAMED	coord: 12..127

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05601	Cla001225	Watermelon (97103) v1	carwmB0072
Carg05601	Csa6G003470	Cucumber (Chinese Long) v2	carcuB0073
Carg05601	MELO3C021213	Melon (DHL92) v3.5.1	carmeB0067
Carg05601	CSPI06G00460	Wild cucumber (PI 183967)	carcpiB0077
Carg05601	Cucsa.135500	Cucumber (Gy14) v1	carcgyB0077
Carg05601	CmaCh17G004300	Cucurbita maxima (Rimu)	carcmaB0091
Carg05601	CmoCh17G004090	Cucurbita moschata (Rifu)	carcmoB0097
Carg05601	Lsi09G015630	Bottle gourd (USVL1VR-Ls)	carlsiB061
Carg05601	Cp4.1LG12g03670	Cucurbita pepo (Zucchini)	carcpeB0099
Carg05601	CsGy6G000520	Cucumber (Gy14) v2	carcgybB0074
Carg05601	MELO3C021213.2	Melon (DHL92) v3.6.1	carmedB0068
Carg05601	CsaV3_6G000520	Cucumber (Chinese Long) v3	carcucB0081
Carg05601	Cla97C06G113170	Watermelon (97103) v2	carwmbB0070
Carg05601	Bhi12G001652	Wax gourd	carwgoB0081

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05601	Cucurbita maxima (Rimu)	carcmaB0097
Carg05601	Cucurbita moschata (Rifu)	carcmoB0105
Carg05601	Cucurbita pepo (Zucchini)	carcpeB0103
Carg05601	Watermelon (Charleston Gray)	carwcgB0073
Carg05601	Watermelon (97103) v1	carwmB0073