Carg05433 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCAGATTGTTGATAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAGGGGATTGCGTCGTATTACGAGGGTGTTTTTGAGGCCAAGGGGAAATCCATGAGTGTGTGCATCGGCTCCAATACGTACACGGATCCCGACCCCCTTTTACTTCTGCCTTGGAGGTTGTGTTGTTGGGGGATTCTCTTTATAATATGAGGTATTTTGTTAACTGCGGCTTGCGTTTGATTGGCTTGTGTTTGATTGGAAAGTGTCAAAGACTTATTGTCTGTGGCTGTGTGTTGGATGTCCCGATCATACTTTGTATAAGACGTATTGTCCTTAGGTTTTTACTTTGTATAAGACCGTTTCAAACCTCTTTTATTTGCTTTAATTTGCAGATAGGTTTTTACTATTTCTCTCATGAAAATATAGTGGTGTATGTGACTGAGGCTCGATCATTGTCTGCAACTTACGATTTGCATACGTCTAACTTGTTCACCGGCAAGAGAGGAATTGTGACACTAGACACAATTTTGGGTACACTGGATCAAACTTACGGTTTGTTTTGGAAAAGGGGAAAAAATTGAATGCTTCTTTTGACTTTCCATAAAGGGGGCTCACAATTTGACATTTATTTCTGGCATGAATTGACTGTTTTTGGTGTAAACATGAGTAGCCAGGATTTATATATGACAACTAGCTTTCTTGGTTTTGCCATGTTTATGATTCTATACTTTAGCAGTAATGGGTAAACTTTGAAGAACAATCTCTTGAAATGAGATAAAAGTCAGAGGGGACTGAGTTGAATAGGTTTTTGTCATAATTTGTTGCGGTGCTCCAAATGTATTATCTTGCGTCTGTTTGCATTACTTTCTTTTCAAGTTGATCACTTTTGGCAACCATTTGGGAATAACAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGGTAAAGAATGATAAGCTGGAACAATTGGAGGCCACATTGCTCTATACTTTGCTAATGATCATGTTGTTTTTGCAAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGTCCATTGATCCATGGTGGAAAACCTTTTCATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGGTATGTAACTTCATTGTTTTTTGTTTGCTTTATACGTGTCTATGCGCACGCCAACCATCTTTCATGGAAGCATATGGGTCTATACCTAATTGCAGTTCATAGCTTGTTCTTGATTTTAGTGAAAGAGGAGATCAACTTGAACTTAATCATGTAATTAGAATGAATTCATTTTTGAGGCCTTGTGAGTGCTTATGCCATTTGTGAATGCAAGGGAAATTAAGCTAGAATTATTAAAGCATGGGGGAGTAAGGGAAGAGAAAATGACATTAATTTACTAGCCACTGCTTGTTTGTGGTCCTTCATTTCATTCATGATTTGCACATGGATTTTCCTTTTCCTTTATAGTATGTCTGATCTTTCCATTGCTGGTTTCATGATGTTTATTGTAGGTTAGTTGTAGTCATCATAACATTGACTTGTCTACTAATCATGGCTATCAATCTTGCGGGAGTAAAAAGGAGTCTAAAAAATTCCCAACCTGATTGGATTGGAGATCCATGCTTCAACCATCAGTATCGCTGGGCAGGAATTACATGTTCTGAAGGCTCTTGAATTCGTGTGGTTACTTTGTGAGTTTGAACTCTTTATGGCTTTTAAATTCTATATTTCATATTCACTTCATGTTAACAAACTGCTTCCCTTTCCTGATTTCAGAAACCTTTTGAGTATGGACCTTTCAGGATCCTTATCACGTAGCAGTTCTTGACAGAGTATGCTCCCTGAATATAGTGTTTGACATTTATTTATCAATTTTGTTTCTGGATTCATCTGCTATCTCACTTGGCAGTTCTTGACAGGCATTTGGAAGATAATAACTTCAGTGTGGTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGA ATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCAGATTGTTGATAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAGGGGATTGCGTCGTTTTTGTCATAATTTGTTGCGGTGCTCCAAATGTATTATCTTGCGTCTGTTTGCATTACTTTCTTTTCAAGTTGATCACTTTTGGCAACCATTTGGGAATAACAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGGTAAAGAATGATAAGCTGGAACAATTGGAGGCCACATTGCTCTATACTTTGCTAATGATCATGTTGTTTTTGCAAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGTCCATTGATCCATGGTGGAAAACCTTTTCATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTATGTCTGATCTTTCCATTGCTGGTTTCATGATGTTTATTGTAGTTCTTGACAGGCATTTGGAAGATAATAACTTCAGTGTGGTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGA ATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCAGATTGTTGATAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAGGGGATTGCGTCGTTTTTGTCATAATTTGTTGCGGTGCTCCAAATGTATTATCTTGCGTCTGTTTGCATTACTTTCTTTTCAAGTTGATCACTTTTGGCAACCATTTGGGAATAACAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGGTAAAGAATGATAAGCTGGAACAATTGGAGGCCACATTGCTCTATACTTTGCTAATGATCATGTTGTTTTTGCAAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGTCCATTGATCCATGGTGGAAAACCTTTTCATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTATGTCTGATCTTTCCATTGCTGGTTTCATGATGTTTATTGTAGTTCTTGACAGGCATTTGGAAGATAATAACTTCAGTGTGGTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGA MTYYYGGVNGLDSPPVFDQIVDRTVWSVVSTSGDFGRGLRRFCHNLLRCSKCIILRLFALLSFQVDHFWQPFGNNSWNVTNRTVSASSIWNLDPSKLFETEVKNDKLEQLEATLLYTLLMIMLFLQAGGSLSPVKTWSIDPWWKTFSCCAPCSKNSCKRCMSDLSIAGFMMFIVVLDRHLEDNNFSVVRFHCHLELCLA
BLAST of Carg05433 vs. NCBI nr
Match: XP_022930386.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucurbita moschata]) HSP 1 Score: 128.3 bits (321), Expect = 3.0e-26 Identity = 75/160 (46.88%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Carg05433 vs. NCBI nr
Match: XP_023000021.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucurbita maxima]) HSP 1 Score: 127.9 bits (320), Expect = 3.9e-26 Identity = 74/160 (46.25%), Postives = 84/160 (52.50%), Query Frame = 0
BLAST of Carg05433 vs. NCBI nr
Match: XP_023513459.1 (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.5 bits (319), Expect = 5.1e-26 Identity = 75/160 (46.88%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Carg05433 vs. NCBI nr
Match: XP_008449566.2 (PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 1.9e-25 Identity = 74/160 (46.25%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of Carg05433 vs. NCBI nr
Match: XP_004140259.1 (PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucumis sativus] >KGN48022.1 hypothetical protein Csa_6G425100 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 7.4e-25 Identity = 72/160 (45.00%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Carg05433 vs. TAIR10
Match: AT3G05990.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 80.9 bits (198), Expect = 9.9e-16 Identity = 50/163 (30.67%), Postives = 72/163 (44.17%), Query Frame = 0
BLAST of Carg05433 vs. TAIR10
Match: AT3G19230.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 56.2 bits (134), Expect = 2.6e-08 Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of Carg05433 vs. TrEMBL
Match: tr|A0A1S3BN88|A0A1S3BN88_CUCME (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 OS=Cucumis melo OX=3656 GN=LOC103491411 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25 Identity = 74/160 (46.25%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of Carg05433 vs. TrEMBL
Match: tr|A0A0A0KI45|A0A0A0KI45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425100 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25 Identity = 72/160 (45.00%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Carg05433 vs. TrEMBL
Match: tr|A0A200QQ37|A0A200QQ37_9MAGN (Leucine-rich repeat OS=Macleaya cordata OX=56857 GN=BVC80_9013g21 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16 Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 0
BLAST of Carg05433 vs. TrEMBL
Match: tr|A0A2N9HAQ6|A0A2N9HAQ6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36613 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.4e-16 Identity = 57/161 (35.40%), Postives = 74/161 (45.96%), Query Frame = 0
BLAST of Carg05433 vs. TrEMBL
Match: tr|A0A2P5E3L2|A0A2P5E3L2_PARAD (Malectin-like carbohydrate-binding protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005780 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15 Identity = 58/161 (36.02%), Postives = 72/161 (44.72%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |