Carg05409 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05409
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor like
Location	Cucurbita_argyrosperma_scaffold_046 : 193560 .. 197833 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAGAGAAGTTTGTAAGCAACTATGAGCAACCATGAAAGACAACAAACAATTTGAACGGCCATGGAAAAACGGCAGTACGTTTGAGAAACAGACGAAATAAGAACTTTCTCGAGAGTAATTTGTAGAGAGAGTTCAAGGACTTGGGAGGCCTTTTATGATTCTGGAATTTAGTTCCGCCGACGTTCGATCATTCAGTTTTGATGCGGTTTCAGAGCGTCAGAAGACGTAATTAACTGTTGAACGGATTCGACTTCTTGTTGATTCAGGAATTTGGTTTTGTTGTTTTCTGGAAGTCGTCAGTAATTACTTGAGTTGTCTAGAAAAGAGGATGAATCACTGCGTTCCTGATTTCGAGAGGGACGAAGATTTCTCGCTTTCTAATTCTTCCGTGCAATCGCGCTTCAAAACATCTTCCATGTGAGTGTTTGTTTGTTTCTTTATTTCTTTATTGTTTCTCGATTCGAGATTAGTTTGATGGATGCGAGGCCGGATACTTTAAAAACAGGTCAGACGGCGAGGTTATGGAACTTCTTTGGCAGAACGGGCAGGTGATTATGCAAAATCAGAACCAGAAATCTAGAACGAAATCCCCACCTTCAACAACCGCCGAGCAAATTACGAGTGGAGATAATCAACCTTTGCAACAAGAGGAACCACCGCAGCTTTTCATGCAGGAAGACGAAATGATTTCGTGGCTTCATTATCCTCTTGTCGATGATTCTACCTTGGAGAATAGCTTCTGCAATGAACTCCTCTATCATTCGGATCCTCAGAGTATTGAGCAAAACGATGGCGTTTCTTCTCAAATTCGTACTAGTCCTGGCGTGGAGTTTCAGCCGTTAACGACGACGGCGACTTCAACGATGGCTGCTCGGCCGCCAATACCACCAATGAGAAGAACGGAACCGGAAACAGAGGTAAATAATTTCGGACTCTTCTCGAGGTTCACACCTACGGTCGAATCTCCTCCGTCGAATTCGAAGAGCATAGTAAGAGAATCTCCGGTGGTTGGTTCGACTTCGAGCAGCACAACGGTGTTGACGCTCGAATCTACGGATTCGGAATTACGGAGGACGGCTACGGCCGATGCATCAATCGGTGATTTAGCCTGCGCGGTTATGAGCGGTGGTGGAGTAGCGGCTACATCGACTGGTAATGGTGTAGGGCTGATGAAGATGATAGGTGGTGAAACAGAATCGATTCAAAGGACGATGAGTCTTGAGGACCGGAAGCGGAAAGGAAAAGAAATGGATGATTCCGACTACCAATGCTACAGCCCGGTGAGTCTTGCTACAAACTCGGTTAATCTGGCGTTATTCAATTTTTTATTTATTTTTTATTTTTTGATTTTATGTCCCTTTCATTCCTTATATTTCTTCTTCTTTTGAGAGGATGTTTCCCATTGATTCTCATGATTGATAGAATATATTATATGATTACGGATAATGATTTCCACCATATACCTTATGAAAATTACCGGACCATATAGAACATATATATATATATGGGTGTTTTTTGAAAGGATATTTGTAGCATTTAGCAGCATGATTAAGTTGCATATCATCAATTTCTTTTAGAATTTCGTGTGTTGTTCAGCTGAAAAAAGAAAAGAAAAGAAAAAAAAAAAAAGAAAACAATGCTATCACTTCGTAAAATTTTAGATTAGATGAATTTTATATATTGAATCAGTAAAAAAACCCATATTAGTTTTTGGTATAAATTAACATATCAAATAAAACAAATACTAAGATTGCTGCATATATTAGAAGTTTTAGGGTGTTCATCTAGAAAAGTCCAAAATGTTTAGCTAAGATGGAAATGGTACGTTCCAGCTCAGAGGTTTCAATCTCCATACCCATTTATTGTTAACTAAGAATCTTACTTGTGGTCGTATTTAAGGAATAGCAATAATAGCAATGTCAGTAGAAATGAAAAAAATGACAATTTCTGGATCAGAGAGCATTCTTAATAGCTGTTGAAAGTTTCCATGCTTGGGTAGAGAGTTTGGTGGTTACTGGATTTTTCTAGGATGCAGAGTAATGATGCTGATGATAAAGCTCTAAGAATTTTTTTTTATACGAGGGATTGTTGTATATATTTTATTATACTCTTAGAATTAAAACCTGTGAAACTAGTCCAATTAGTTAAAAATATGTTCAGAAGAATTTTGCAGACAAATCCAATCCAACGAGACTATTATTCTTAATTGAGCCAATCGCTAATAGATACGGTCTTTTTTGAACTTTTCCTTTTAGACTTTCTCTCAAGATTTTTAAAACGTGTCTGTCATTGAGGAGGCTGAACCTCGAAGGGGTGGACACGAGACGGTGTGTCAGCAAGAATGTTGTGCCCCAAAAGGGGTGGATTGGGAGATCTCATATCGATCGGGGAGGAGAACGAAATATTCTTTATAAGGGTATGAGAACCTCTCCCAAGCATACACATTTTCTAAAGGAAAGTTTGAAAACAAAATATCACCCTGACTACCCTTAAAGACTTTGTGAATGTAATAAATACATAGTTTTCAGAATTTATGTACATGCCGTTGCTTTGTACTGTGGCTCTGAAATATTGAACTATGAGTGGATTCTTGCGTGCTTCCTCTGCGCATATAAATTCGGATGCTCATGCTTGATGGGGCTACTGCTTTGGTGCCACTTTCTAGCTTTTCAAGGCCTCATTAAAAGTGTTAACTTTATAAACATTTGCCAAAGGACGTTGAGTTCGAAGCTACTGATGTGAAGAAGCAAGCTCGTGGATCAACCTCTACAAAAAGATCTCGTGCTGCTGAGGTCCATAATCTCTCTGAGCGAGTGAGTAATTTGCTGCTGTTATATAAAGGACAGTGTAGCTTCTTCTGTGTTTTTGTTATTCGTCTGTTCATGGAAAACATCCCTACATTACAGAGAAGAAGAGATAGGATAAATGAAAAGATGAAAGCTTTGCAGGAGCTCATACCTCGGTGTAACAAGGTGCATATCCAATTAGCGAGACAATTTCCAACCCCTGAAATCAGTGCGTAGATCAAATTATTTCTTCCCATTTTTCTTTGTTCACTGAGATTTGGTTAATATTTTCTCAAATTTCAGGTAGACAAAGCTTCAATGTTGGATGAGGCAATTGAGTACTTGAAGTCACTTCAGTTGCAAGTTCAGGTTGGTTACCCCTTCCATGTTTACTCAAAATCACGTTGGGCATACATTTTCGTGCTATTTAGTAGTGGGGTACTAACACTTGACCATTTGGGTTTACTCATGTTCTTTATTTCAAGTATGAATACATCTACTTTGGATGGAGTTAACTATAATTGGATTTTTGCTGGCTTTATTTGACATCTCACTTCTATTCAGTCTGAAGATTTGCATGGAGCACTTGTGACCCTTGTGGTTTTTTCCTTTCATCGTCCGTATTTATCTGTGTTTGTTCCTCTACTCTACTACTGTCATGTTTCATTTTTAGAATATTTCGTTCTCCTCCCCAATCGAGGTAGGATTTCACAATCTACCCCCTTCGGGGCCTAGCTCCTTGGTAGCACACTGCCTCGTGTCTACTCCCTTTGGGGCTTAGTCTTATAGCAGACACATCGCCCGATGTTTGACTCTAATACCATTTGTAACAGCCAAAGCCTATTGCTAGCAAATATTGCTCTTTAGGCTTTCCTTTTTAAGCTTCACCTCAAGGTTTTTAAAATACTTGAAGAGGTTTCGATACACTTATAAAAAATGCTTCGTTCTCCTTCCCGACCGATGTAGGATCTCACACTTGCAGGGGAGTATTCTACCTCTTTTTATATCACCGAGTTTGCATAATTGTGATCAAAAGATTGGGGATGGGACTCACATCTGCGTGATGATTTCCCCATAGAATCTGATAAAATTTTGGTGAAAATGTTGGTTGTAGCATGACAAACGTGGTACAGTATGCATGATAAGTAATACGAATATTGACCAGTTTCTATGCAGATGATGTCCATGGGATGTGGTATGGTGCCCATGATGTTTCCTGGGGTCCAACAATTCATGCCGCCAATGGGAATGGGACTTGGAATGGGCATGGGCATGGGCATGGAAACAGGTGTGAGCCGTCCCATGATGCCATACCCCAACATGTTAGCTGGGCCAATGTTTCCAAGGCAATCTGGAGCTGCTCAACTTGGCCCAACTTTCTCATTCCCAGCCTTCAATATGGCGCATCAGAATTCAAGAATTCAAGAAACAAATCAGTCGAATCAATTGCACAGCTTACCAGGAATGAAAAATATAAACCCGCCA

mRNA sequence

CATTAGAGAAGTTTGTAAGCAACTATGAGCAACCATGAAAGACAACAAACAATTTGAACGGCCATGGAAAAACGGCAGTACGTTTGAGAAACAGACGAAATAAGAACTTTCTCGAGAGTAATTTGTAGAGAGAGTTCAAGGACTTGGGAGGCCTTTTATGATTCTGGAATTTAGTTCCGCCGACGTTCGATCATTCAGTTTTGATGCGGTTTCAGAGCGTCAGAAGACGTAATTAACTGTTGAACGGATTCGACTTCTTGTTGATTCAGGAATTTGGTTTTGTTGTTTTCTGGAAGTCGTCAGTAATTACTTGAGTTGTCTAGAAAAGAGGATGAATCACTGCGTTCCTGATTTCGAGAGGGACGAAGATTTCTCGCTTTCTAATTCTTCCGTGCAATCGCGCTTCAAAACATCTTCCATGTCAGACGGCGAGGTTATGGAACTTCTTTGGCAGAACGGGCAGGTGATTATGCAAAATCAGAACCAGAAATCTAGAACGAAATCCCCACCTTCAACAACCGCCGAGCAAATTACGAGTGGAGATAATCAACCTTTGCAACAAGAGGAACCACCGCAGCTTTTCATGCAGGAAGACGAAATGATTTCGTGGCTTCATTATCCTCTTGTCGATGATTCTACCTTGGAGAATAGCTTCTGCAATGAACTCCTCTATCATTCGGATCCTCAGAGTATTGAGCAAAACGATGGCGTTTCTTCTCAAATTCGTACTAGTCCTGGCGTGGAGTTTCAGCCGTTAACGACGACGGCGACTTCAACGATGGCTGCTCGGCCGCCAATACCACCAATGAGAAGAACGGAACCGGAAACAGAGGTAAATAATTTCGGACTCTTCTCGAGGTTCACACCTACGGTCGAATCTCCTCCGTCGAATTCGAAGAGCATAGTAAGAGAATCTCCGGTGGTTGGTTCGACTTCGAGCAGCACAACGGTGTTGACGCTCGAATCTACGGATTCGGAATTACGGAGGACGGCTACGGCCGATGCATCAATCGGTGATTTAGCCTGCGCGGTTATGAGCGGTGGTGGAGTAGCGGCTACATCGACTGGTAATGGTGTAGGGCTGATGAAGATGATAGGTGGTGAAACAGAATCGATTCAAAGGACGATGAGTCTTGAGGACCGGAAGCGGAAAGGAAAAGAAATGGATGATTCCGACTACCAATGCTACAGCCCGGACGTTGAGTTCGAAGCTACTGATGTGAAGAAGCAAGCTCGTGGATCAACCTCTACAAAAAGATCTCGTGCTGCTGAGGTCCATAATCTCTCTGAGCGAGTGAGTAATTTGCTGCTGTTATATAAAGGACAGTGTAGCTTCTTCTGTGTTTTTGTTATTCGTCTGTTCATGGAAAACATCCCTACATTACAGAGAAGAAGAGATAGGATAAATGAAAAGATGAAAGCTTTGCAGGAGCTCATACCTCGGTGTAACAAGGTAGACAAAGCTTCAATGTTGGATGAGGCAATTGAGTACTTGAAGTCACTTCAGTTGCAAGTTCAGATGATGTCCATGGGATGTGGTATGGTGCCCATGATGTTTCCTGGGGTCCAACAATTCATGCCGCCAATGGGAATGGGACTTGGAATGGGCATGGGCATGGGCATGGAAACAGGTGTGAGCCGTCCCATGATGCCATACCCCAACATGTTAGCTGGGCCAATGTTTCCAAGGCAATCTGGAGCTGCTCAACTTGGCCCAACTTTCTCATTCCCAGCCTTCAATATGGCGCATCAGAATTCAAGAATTCAAGAAACAAATCAGTCGAATCAATTGCACAGCTTACCAGGAATGAAAAATATAAACCCGCCA

Coding sequence (CDS)

ATGAATCACTGCGTTCCTGATTTCGAGAGGGACGAAGATTTCTCGCTTTCTAATTCTTCCGTGCAATCGCGCTTCAAAACATCTTCCATGTCAGACGGCGAGGTTATGGAACTTCTTTGGCAGAACGGGCAGGTGATTATGCAAAATCAGAACCAGAAATCTAGAACGAAATCCCCACCTTCAACAACCGCCGAGCAAATTACGAGTGGAGATAATCAACCTTTGCAACAAGAGGAACCACCGCAGCTTTTCATGCAGGAAGACGAAATGATTTCGTGGCTTCATTATCCTCTTGTCGATGATTCTACCTTGGAGAATAGCTTCTGCAATGAACTCCTCTATCATTCGGATCCTCAGAGTATTGAGCAAAACGATGGCGTTTCTTCTCAAATTCGTACTAGTCCTGGCGTGGAGTTTCAGCCGTTAACGACGACGGCGACTTCAACGATGGCTGCTCGGCCGCCAATACCACCAATGAGAAGAACGGAACCGGAAACAGAGGTAAATAATTTCGGACTCTTCTCGAGGTTCACACCTACGGTCGAATCTCCTCCGTCGAATTCGAAGAGCATAGTAAGAGAATCTCCGGTGGTTGGTTCGACTTCGAGCAGCACAACGGTGTTGACGCTCGAATCTACGGATTCGGAATTACGGAGGACGGCTACGGCCGATGCATCAATCGGTGATTTAGCCTGCGCGGTTATGAGCGGTGGTGGAGTAGCGGCTACATCGACTGGTAATGGTGTAGGGCTGATGAAGATGATAGGTGGTGAAACAGAATCGATTCAAAGGACGATGAGTCTTGAGGACCGGAAGCGGAAAGGAAAAGAAATGGATGATTCCGACTACCAATGCTACAGCCCGGACGTTGAGTTCGAAGCTACTGATGTGAAGAAGCAAGCTCGTGGATCAACCTCTACAAAAAGATCTCGTGCTGCTGAGGTCCATAATCTCTCTGAGCGAGTGAGTAATTTGCTGCTGTTATATAAAGGACAGTGTAGCTTCTTCTGTGTTTTTGTTATTCGTCTGTTCATGGAAAACATCCCTACATTACAGAGAAGAAGAGATAGGATAAATGAAAAGATGAAAGCTTTGCAGGAGCTCATACCTCGGTGTAACAAGGTAGACAAAGCTTCAATGTTGGATGAGGCAATTGAGTACTTGAAGTCACTTCAGTTGCAAGTTCAGATGATGTCCATGGGATGTGGTATGGTGCCCATGATGTTTCCTGGGGTCCAACAATTCATGCCGCCAATGGGAATGGGACTTGGAATGGGCATGGGCATGGGCATGGAAACAGGTGTGAGCCGTCCCATGATGCCATACCCCAACATGTTAGCTGGGCCAATGTTTCCAAGGCAATCTGGAGCTGCTCAACTTGGCCCAACTTTCTCATTCCCAGCCTTCAATATGGCGCATCAGAATTCAAGAATTCAAGAAACAAATCAGTCGAATCAATTGCACAGCTTACCAGGAATGAAAAATATAAACCCGCCA

Protein sequence

MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPTVESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMGMGLGMGMGMGMETGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQETNQSNQLHSLPGMKNINPP

Homology

[Close]

BLAST of Carg05409 vs. NCBI nr
Match: XP_023554099.1 (transcription factor PIF1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023554100.1 transcription factor PIF1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 836.6 bits (2160), Expect = 4.3e-239
Identity = 458/499 (91.78%), Postives = 465/499 (93.19%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFERDEDFSLSNSSVQ RFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP
Sbjct: 1   MNHCVPDFERDEDFSLSNSSVQLRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60

Query: 61  STTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120
           STTA+QITSGDNQPLQQ+EPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS
Sbjct: 61  STTADQITSGDNQPLQQDEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120

Query: 121 IEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180
           I+QNDGVSSQIRTS GVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT
Sbjct: 121 IDQNDGVSSQIRTSHGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180

Query: 181 VESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGV 240
           VESPPSNSKSIVRESPVVGSTSS+TTVLTLEST SEL+RTATADASIGDLACAVMSGGGV
Sbjct: 181 VESPPSNSKSIVRESPVVGSTSSNTTVLTLESTASELQRTATADASIGDLACAVMSGGGV 240

Query: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300
           AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ
Sbjct: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300

Query: 301 ARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINE 360
           ARGSTSTKRSRAAEVHNLSER                               RRRDRINE
Sbjct: 301 ARGSTSTKRSRAAEVHNLSER-------------------------------RRRDRINE 360

Query: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420
           KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQ+MSMGCGMVPMMFPGVQQFMPPMG
Sbjct: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQIMSMGCGMVPMMFPGVQQFMPPMG 420

Query: 421 XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 480
           XXXXXXXXXXXXXGV+RPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE
Sbjct: 421 XXXXXXXXXXXXXGVNRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 468

Query: 481 TNQSNQLHSLPGMKNINPP 500
           TNQSNQLHSLPGMKNINPP
Sbjct: 481 TNQSNQLHSLPGMKNINPP 468

[Close]

BLAST of Carg05409 vs. NCBI nr
Match: XP_023554098.1 (transcription factor PIF1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 836.6 bits (2160), Expect = 4.3e-239
Identity = 458/499 (91.78%), Postives = 465/499 (93.19%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFERDEDFSLSNSSVQ RFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP
Sbjct: 1   MNHCVPDFERDEDFSLSNSSVQLRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60

Query: 61  STTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120
           STTA+QITSGDNQPLQQ+EPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS
Sbjct: 61  STTADQITSGDNQPLQQDEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120

Query: 121 IEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180
           I+QNDGVSSQIRTS GVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT
Sbjct: 121 IDQNDGVSSQIRTSHGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180

Query: 181 VESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGV 240
           VESPPSNSKSIVRESPVVGSTSS+TTVLTLEST SEL+RTATADASIGDLACAVMSGGGV
Sbjct: 181 VESPPSNSKSIVRESPVVGSTSSNTTVLTLESTASELQRTATADASIGDLACAVMSGGGV 240

Query: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300
           AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ
Sbjct: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300

Query: 301 ARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINE 360
           ARGSTSTKRSRAAEVHNLSER                               RRRDRINE
Sbjct: 301 ARGSTSTKRSRAAEVHNLSER-------------------------------RRRDRINE 360

Query: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420
           KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQ+MSMGCGMVPMMFPGVQQFMPPMG
Sbjct: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQIMSMGCGMVPMMFPGVQQFMPPMG 420

Query: 421 XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 480
           XXXXXXXXXXXXXGV+RPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE
Sbjct: 421 XXXXXXXXXXXXXGVNRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 468

Query: 481 TNQSNQLHSLPGMKNINPP 500
           TNQSNQLHSLPGMKNINPP
Sbjct: 481 TNQSNQLHSLPGMKNINPP 468

[Close]

BLAST of Carg05409 vs. NCBI nr
Match: XP_022963680.1 (transcription factor PIF1-like isoform X2 [Cucurbita moschata] >XP_022963681.1 transcription factor PIF1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 824.7 bits (2129), Expect = 1.7e-235
Identity = 453/499 (90.78%), Postives = 458/499 (91.78%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQK RTKSPP
Sbjct: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKFRTKSPP 60

Query: 61  STTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120
           STTAEQITSGDNQP QQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS
Sbjct: 61  STTAEQITSGDNQPFQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120

Query: 121 IEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180
           IEQNDGVSSQIRTS GVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT
Sbjct: 121 IEQNDGVSSQIRTSRGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180

Query: 181 VESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGV 240
           VESPPSNSKSIVRESPVVGSTSS+TTVLTLEST SEL+RTATADASIGDLACAVMS GGV
Sbjct: 181 VESPPSNSKSIVRESPVVGSTSSNTTVLTLESTASELQRTATADASIGDLACAVMSSGGV 240

Query: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300
           AATSTGNGVGLMKMIGGETESIQRT SLEDRKRKGKEMDDSDYQCYSPDV FEATD KKQ
Sbjct: 241 AATSTGNGVGLMKMIGGETESIQRTTSLEDRKRKGKEMDDSDYQCYSPDVGFEATDAKKQ 300

Query: 301 ARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINE 360
           ARGSTSTKRSRAAEVHNLSER                               RRRDRINE
Sbjct: 301 ARGSTSTKRSRAAEVHNLSER-------------------------------RRRDRINE 360

Query: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420
           KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG
Sbjct: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420

Query: 421 XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 480
           XXXXXXXXXXXXXGV+RPMMPYPN+LAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE
Sbjct: 421 XXXXXXXXXXXXXGVNRPMMPYPNLLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 468

Query: 481 TNQSNQLHSLPGMKNINPP 500
           TNQS+  HSLPGMKNINPP
Sbjct: 481 TNQSDHFHSLPGMKNINPP 468

[Close]

BLAST of Carg05409 vs. NCBI nr
Match: XP_022963679.1 (transcription factor PIF1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 824.7 bits (2129), Expect = 1.7e-235
Identity = 453/499 (90.78%), Postives = 458/499 (91.78%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQK RTKSPP
Sbjct: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKFRTKSPP 60

Query: 61  STTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120
           STTAEQITSGDNQP QQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS
Sbjct: 61  STTAEQITSGDNQPFQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120

Query: 121 IEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180
           IEQNDGVSSQIRTS GVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT
Sbjct: 121 IEQNDGVSSQIRTSRGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180

Query: 181 VESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGV 240
           VESPPSNSKSIVRESPVVGSTSS+TTVLTLEST SEL+RTATADASIGDLACAVMS GGV
Sbjct: 181 VESPPSNSKSIVRESPVVGSTSSNTTVLTLESTASELQRTATADASIGDLACAVMSSGGV 240

Query: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300
           AATSTGNGVGLMKMIGGETESIQRT SLEDRKRKGKEMDDSDYQCYSPDV FEATD KKQ
Sbjct: 241 AATSTGNGVGLMKMIGGETESIQRTTSLEDRKRKGKEMDDSDYQCYSPDVGFEATDAKKQ 300

Query: 301 ARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINE 360
           ARGSTSTKRSRAAEVHNLSER                               RRRDRINE
Sbjct: 301 ARGSTSTKRSRAAEVHNLSER-------------------------------RRRDRINE 360

Query: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420
           KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG
Sbjct: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420

Query: 421 XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 480
           XXXXXXXXXXXXXGV+RPMMPYPN+LAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE
Sbjct: 421 XXXXXXXXXXXXXGVNRPMMPYPNLLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 468

Query: 481 TNQSNQLHSLPGMKNINPP 500
           TNQS+  HSLPGMKNINPP
Sbjct: 481 TNQSDHFHSLPGMKNINPP 468

[Close]

BLAST of Carg05409 vs. NCBI nr
Match: XP_022967234.1 (transcription factor PIF1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 822.0 bits (2122), Expect = 1.1e-234
Identity = 451/499 (90.38%), Postives = 457/499 (91.58%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQ IMQNQNQ SRTKSPP
Sbjct: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQAIMQNQNQNSRTKSPP 60

Query: 61  STTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQS 120
           STTAEQITSGDNQP QQ+EPPQLFMQEDEM SWLHYPLVDDSTLENSFCNELLYHSDP+S
Sbjct: 61  STTAEQITSGDNQPFQQDEPPQLFMQEDEMSSWLHYPLVDDSTLENSFCNELLYHSDPRS 120

Query: 121 IEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180
           IEQND VSSQIRTS GVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT
Sbjct: 121 IEQNDSVSSQIRTSHGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSRFTPT 180

Query: 181 VESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGV 240
           VESPPSNSKSIVRESPVVGSTSS+TTVLTLEST SELRRTATADASIGDLACAVMSGGGV
Sbjct: 181 VESPPSNSKSIVRESPVVGSTSSNTTVLTLESTASELRRTATADASIGDLACAVMSGGGV 240

Query: 241 AATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQ 300
           AATSTGNGVGLMK+IGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDV FEATD KKQ
Sbjct: 241 AATSTGNGVGLMKIIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVGFEATDAKKQ 300

Query: 301 ARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINE 360
           ARGSTSTKRSRAAEVHNLSER                               RRRDRINE
Sbjct: 301 ARGSTSTKRSRAAEVHNLSER-------------------------------RRRDRINE 360

Query: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420
           KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG
Sbjct: 361 KMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMG 420

Query: 421 XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 480
           XXXXXXXXXXXXXGV+RPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE
Sbjct: 421 XXXXXXXXXXXXXGVNRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQE 468

Query: 481 TNQSNQLHSLPGMKNINPP 500
           TNQS+  HSLPGMKNINPP
Sbjct: 481 TNQSDHFHSLPGMKNINPP 468

[Close]

BLAST of Carg05409 vs. TAIR10
Match: AT2G20180.2 (phytochrome interacting factor 3-like 5)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 168/484 (34.71%), Postives = 216/484 (44.63%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMS----DGEVMELLWQNGQVIMQNQNQKSRT 60
           M+H VPDF+ D+D+  +++S  +     S++    D ++MELLWQNGQV++  QNQ+  T
Sbjct: 1   MHHFVPDFDTDDDYVNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVV--QNQRLHT 60

Query: 61  KSPPSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHS 120
           K P S+  + + S D Q  Q      LF+QEDEM SWLHYPL DD      FC++LL+ +
Sbjct: 61  KKPSSSPPKLLPSMDPQQ-QPSSDQNLFIQEDEMTSWLHYPLRDD-----DFCSDLLFSA 120

Query: 121 DPQSIEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSR 180
            P +                      T T +   AARP  P            NF  FSR
Sbjct: 121 APTA--------------------TATATVSQVTAARP--PXXXXXXXXXXXRNFMNFSR 180

Query: 181 FTPTV------ESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDL 240
                      ES P  SK++VRES  V   S S T     S     RRT   D+S    
Sbjct: 181 LRGDFNNGRGGESGPLLSKAVVRESTQV---SPSATPSAAASESGLTRRTDGTDSS---- 240

Query: 241 ACAVMSGGGVAATSTGNGVGL----MKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCY 300
               ++GGG A    G  V +    ++                                 
Sbjct: 241 ---AVAGGG-AYNRKGKAVAMTAPAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 SPDVEFEATDVKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFME 360
                                       VHNLSER                         
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVHNLSER------------------------- 360

Query: 361 NIPTLQRRRDRINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVP 420
                 +RRDRINE+MKALQELIPRCNK DKASMLDEAIEY+KSLQLQ+QMMSMGCGM+P
Sbjct: 361 ------KRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMP 402

Query: 421 MMFPGVQQFMPPMGXXXXXXXXXXXXXGVSRPM-----MPYPNMLAGPM-FPRQSGAAQL 465
           MM+PG+QQ+MP M              G+++P+     MP+PNMLA     P Q+  A  
Sbjct: 421 MMYPGMQQYMPHMA----------MGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGS 402

[Close]

BLAST of Carg05409 vs. TAIR10
Match: AT4G28811.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 8.5e-32
Identity = 154/478 (32.22%), Postives = 216/478 (45.19%), Query Frame = 0


Query: 31  SDGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSGDNQ--PLQQEEP--PQLFMQ 90
           S+ +V+ELLW++GQV+   Q Q  R   PP         G+    PL    P    +F+Q
Sbjct: 107 SEDDVVELLWKSGQVVQSIQTQ--RPIPPPIFRGSGSGGGEETVLPLPPLHPSHQNIFIQ 166

Query: 91  EDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGVEFQPLTTTA 150
           EDEM SWL++PL  D            Y S         GV+S   T P          +
Sbjct: 167 EDEMASWLYHPLRQD------------YFS--------SGVASTSATRP---------QS 226

Query: 151 TSTMAARPPIP--PMRRTEPETEVNNFGLFSRFTPTVESPPS-NSKSIVRESPVVGS--- 210
           ++++A  PP P  P  +   E    NF  F R    + S     +  +V ES  +GS   
Sbjct: 227 SASLAPTPPPPSVPYGQIPVERRTENFMNFLRLRGNIFSGGRVEAGPVVIESTQIGSSAT 286

Query: 211 -TSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIGGET 270
            +SS+     + +T     R A         A   +   G    +   G     +   ET
Sbjct: 287 PSSSAAESCVIPATHGTESRAAAITGVSRTFAVPGLGRRGKEVATETAGTSYSGVNKAET 346

Query: 271 ESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVHNLS 330
           E +Q     E +  + K+ +++         E + T+   +A GSTS KRSRAA++HNLS
Sbjct: 347 ERVQIQPERETKITEDKKREET-------IAEIQGTE---EAHGSTSRKRSRAADMHNLS 406

Query: 331 ERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVDKAS 390
           ER                               RRR+RINE+MK LQEL+PRC K DK S
Sbjct: 407 ER-------------------------------RRRERINERMKTLQELLPRCRKTDKVS 466

Query: 391 MLDEAIEYLKSLQLQVQMMSMGCGMV-PMMFPG-VQQFMPPMGXXXXXXXXXXXXXGVSR 450
           ML++ IEY+KSLQLQ+QMMSMG GM+ PMM  G  QQFMP M              G++R
Sbjct: 467 MLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMA---------MGMKGMNR 497

Query: 451 --PMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQETNQSN--QLHSLP 492
             P +P+P    G  FPR    A +GP  S+PA      +++  + ++ +   LHS P
Sbjct: 527 PPPFVPFP----GKTFPRPGHMAGVGP--SYPALRYPFPDTQASDLSRVHVPSLHSNP 497

[Close]

BLAST of Carg05409 vs. TAIR10
Match: AT4G28800.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-30
Identity = 150/454 (33.04%), Postives = 196/454 (43.17%), Query Frame = 0


Query: 32  DGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSG-DNQPLQQEEP----PQLFMQ 91
           + +++ELLWQ+GQV+  NQ  +     PP         G +N PL Q  P      LF+Q
Sbjct: 19  EDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPPHLHQQNLFIQ 78

Query: 92  EDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGVEFQPLTTTA 151
           E EM SWLH+     S  +N FC+ELL +S P +  Q+            +   P  T A
Sbjct: 79  EGEMYSWLHH-----SYRQNYFCSELL-NSTPATHPQS-----------SISLAPRQTIA 138

Query: 152 TSTMAARPPIPPMRRTEPETEVNNFGLFS-----RFTPTVESPPSNSKSIVRESPVVGS- 211
           T            RR E      NF  FS      FT         S S+VRES  VGS 
Sbjct: 139 T------------RRAE------NFMNFSWLRGNIFTGGRVDEAGPSFSVVRESMQVGSN 198

Query: 212 ----TSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIG 271
               +SS+T    + +T+       TA    G LA   +   G A      G     +  
Sbjct: 199 TTPPSSSATESCVIPATE------GTASRVSGTLAAHDLGRKGKAVAVEAAGTPSSGVCK 258

Query: 272 GETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVH 331
            ETE +Q   + E + +  +E                 T   ++ARGSTS KRSR AE+H
Sbjct: 259 AETEPVQIQPATESKLKAREE-----------------THGTEEARGSTSRKRSRTAEMH 318

Query: 332 NLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVD 391
           NL+ER                               RRR++INEKMK LQ+LIPRCNK  
Sbjct: 319 NLAER-------------------------------RRREKINEKMKTLQQLIPRCNKST 364

Query: 392 KASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPG-VQQFMPPMGXXXXXXXXXXXXXGV 451
           K S LD+AIEY+KSLQ Q+Q M     M PMM  G  QQFMP M                
Sbjct: 379 KVSTLDDAIEYVKSLQSQIQGM-----MSPMMNAGNTQQFMPHMAMDMNRPP-------- 364

Query: 452 SRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAF 470
             P +P+P    G  FP  +  A +GP++  P +
Sbjct: 439 --PFIPFP----GTSFPMPAQMAGVGPSYPAPRY 364

[Close]

BLAST of Carg05409 vs. TAIR10
Match: AT4G28790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 5.5e-23
Identity = 147/463 (31.75%), Postives = 194/463 (41.90%), Query Frame = 0


Query: 30  MSDGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSGDNQPLQQE----------- 89
           M + +++ELL ++ QV+  +Q Q       PS     I  G                   
Sbjct: 22  MGEDDIVELLGKSSQVVTSSQTQ------TPSCDPPLILRGXXXXXXXXXXXXXXXXXXL 81

Query: 90  -EPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGV 149
                LF+QEDEM SWLH P       ++   ++LLY           GV+S    S   
Sbjct: 82  YHQQSLFIQEDEMASWLHQP-----NRQDYLYSQLLY----------SGVASTHPQSLAS 141

Query: 150 EFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSR-----FTPTVESPPSNSKSIV 209
              P    A   +AA  P   +     E    NF   SR     F   VE+ PSNS  + 
Sbjct: 142 LEPPPPPRAQYILAADRPTGHIL---AERRAENFMNISRQRGNIFLGGVEAVPSNSTLL- 201

Query: 210 RESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLM 269
                     SS T     +  +E R T T   S    A   +   G A      G    
Sbjct: 202 ----------SSATESIPATHGTESRATVTGGVS-RTFAVPGLGPRGKAVAIETAGTQSW 261

Query: 270 KMIGGETESIQRTMSLE-----DRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTST 329
            +   ETE +QR  + E     +RKRK +E           +VE + T+   +AR STS+
Sbjct: 262 GLCKAETEPVQRQPATETDITDERKRKTRE---------ETNVENQGTE---EARDSTSS 321

Query: 330 KRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQE 389
           KRSRAA +H LSER                               RRR +INE MKALQE
Sbjct: 322 KRSRAAIMHKLSER-------------------------------RRRQKINEMMKALQE 381

Query: 390 LIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMV-PMMFPG--VQQFMPPMGXXXX 449
           L+PRC K D++SMLD+ IEY+KSLQ Q+QM SMG  M+ PMM+ G   QQ+MP M     
Sbjct: 382 LLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMA---- 386

Query: 450 XXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQ-LGPTFSF 467
                    G++RP    P       FPRQ+  A+ +GP   F
Sbjct: 442 --------MGMNRPPAFIP-------FPRQAHMAEGVGPVDLF 386

[Close]

BLAST of Carg05409 vs. TAIR10
Match: AT1G09530.1 (phytochrome interacting factor 3)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-22
Identity = 141/465 (30.32%), Postives = 204/465 (43.87%), Query Frame = 0


Query: 12  EDFSLSNSSVQS-RFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP---STTAEQI 71
           E F L+ + ++S + +  S    EV+EL+W+NGQ+  Q+Q+ +SR   PP   S+ A +I
Sbjct: 5   ELFRLTKAKLESAQDRNPSPPVDEVVELVWENGQISTQSQSSRSRNIPPPQANSSRAREI 64

Query: 72  TSGDNQPLQQEEP---PQL---FMQEDEMISWL-HYPLVDDSTLENSFCNELLYH-SDPQ 131
            +G    +  E P   P L     Q+D+ + WL H+P +D       +C++ L   S P 
Sbjct: 65  GNGSKTTMVDEIPMSVPSLMTGLSQDDDFVPWLNHHPSLD------GYCSDFLRDVSSPV 124

Query: 132 SI--EQNDGVSSQI------RTSPGVEFQPLTTTA--------TSTMAARPPIPPMRRTE 191
           ++  +++D   +Q       R   G E  P  +++        +   + R    P ++T 
Sbjct: 125 TVNEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGSDRARDLPSQQTN 184

Query: 192 PE--------------TEVNNFGLFSRFTPTVESPPSNSKSIVRESPVVGSTSSSTTVLT 251
           P+                + NF  F R     ++  +N      +SP        T VL 
Sbjct: 185 PDRFTQTQEPLITSNKPSLVNFSHFLRPATFAKTTNNNLHDTKEKSPQSPPNVFQTRVLG 244

Query: 252 LESTDSELRRTATADASIGD--LACAVM---------SGGGVAATSTGNGVGLMKMIGGE 311
            + ++ ++   + A A+  D   AC +          S   V  +S G+G      + G 
Sbjct: 245 AKDSEDKVLNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSG----NSLDGP 304

Query: 312 TESIQRTMSLEDRKRKGKEMDDSDYQCYS---PDVEFEATDVKKQARGSTSTKRSRAAEV 371
           +ES   ++SL   KRK   + D D  C+S                          R+AEV
Sbjct: 305 SES--PSLSL---KRKHSNIQDID--CHSXXXXXXXXXXXXXXXXXXXXXXXXXXRSAEV 364

Query: 372 HNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKV 421
           HNLSER                               RRRDRINEKM+ALQELIP CNKV
Sbjct: 365 HNLSER-------------------------------RRRDRINEKMRALQELIPNCNKV 418

[Close]

BLAST of Carg05409 vs. Swiss-Prot
Match: sp|Q8GZM7|PIF1_ARATH (Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.5e-43
Identity = 168/484 (34.71%), Postives = 216/484 (44.63%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMS----DGEVMELLWQNGQVIMQNQNQKSRT 60
           M+H VPDF+ D+D+  +++S  +     S++    D ++MELLWQNGQV++  QNQ+  T
Sbjct: 1   MHHFVPDFDTDDDYVNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVV--QNQRLHT 60

Query: 61  KSPPSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHS 120
           K P S+  + + S D Q  Q      LF+QEDEM SWLHYPL DD      FC++LL+ +
Sbjct: 61  KKPSSSPPKLLPSMDPQQ-QPSSDQNLFIQEDEMTSWLHYPLRDD-----DFCSDLLFSA 120

Query: 121 DPQSIEQNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSR 180
            P +                      T T +   AARP  P            NF  FSR
Sbjct: 121 APTA--------------------TATATVSQVTAARP--PXXXXXXXXXXXRNFMNFSR 180

Query: 181 FTPTV------ESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDL 240
                      ES P  SK++VRES  V   S S T     S     RRT   D+S    
Sbjct: 181 LRGDFNNGRGGESGPLLSKAVVRESTQV---SPSATPSAAASESGLTRRTDGTDSS---- 240

Query: 241 ACAVMSGGGVAATSTGNGVGL----MKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCY 300
               ++GGG A    G  V +    ++                                 
Sbjct: 241 ---AVAGGG-AYNRKGKAVAMTAPAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 SPDVEFEATDVKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFME 360
                                       VHNLSER                         
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVHNLSER------------------------- 360

Query: 361 NIPTLQRRRDRINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVP 420
                 +RRDRINE+MKALQELIPRCNK DKASMLDEAIEY+KSLQLQ+QMMSMGCGM+P
Sbjct: 361 ------KRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMP 402

Query: 421 MMFPGVQQFMPPMGXXXXXXXXXXXXXGVSRPM-----MPYPNMLAGPM-FPRQSGAAQL 465
           MM+PG+QQ+MP M              G+++P+     MP+PNMLA     P Q+  A  
Sbjct: 421 MMYPGMQQYMPHMA----------MGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGS 402

[Close]

BLAST of Carg05409 vs. Swiss-Prot
Match: sp|Q8GT73|BH119_ARATH (Transcription factor bHLH119 OS=Arabidopsis thaliana OX=3702 GN=BHLH119 PE=2 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-30
Identity = 154/478 (32.22%), Postives = 216/478 (45.19%), Query Frame = 0


Query: 31  SDGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSGDNQ--PLQQEEP--PQLFMQ 90
           S+ +V+ELLW++GQV+   Q Q  R   PP         G+    PL    P    +F+Q
Sbjct: 107 SEDDVVELLWKSGQVVQSIQTQ--RPIPPPIFRGSGSGGGEETVLPLPPLHPSHQNIFIQ 166

Query: 91  EDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGVEFQPLTTTA 150
           EDEM SWL++PL  D            Y S         GV+S   T P          +
Sbjct: 167 EDEMASWLYHPLRQD------------YFS--------SGVASTSATRP---------QS 226

Query: 151 TSTMAARPPIP--PMRRTEPETEVNNFGLFSRFTPTVESPPS-NSKSIVRESPVVGS--- 210
           ++++A  PP P  P  +   E    NF  F R    + S     +  +V ES  +GS   
Sbjct: 227 SASLAPTPPPPSVPYGQIPVERRTENFMNFLRLRGNIFSGGRVEAGPVVIESTQIGSSAT 286

Query: 211 -TSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIGGET 270
            +SS+     + +T     R A         A   +   G    +   G     +   ET
Sbjct: 287 PSSSAAESCVIPATHGTESRAAAITGVSRTFAVPGLGRRGKEVATETAGTSYSGVNKAET 346

Query: 271 ESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVHNLS 330
           E +Q     E +  + K+ +++         E + T+   +A GSTS KRSRAA++HNLS
Sbjct: 347 ERVQIQPERETKITEDKKREET-------IAEIQGTE---EAHGSTSRKRSRAADMHNLS 406

Query: 331 ERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVDKAS 390
           ER                               RRR+RINE+MK LQEL+PRC K DK S
Sbjct: 407 ER-------------------------------RRRERINERMKTLQELLPRCRKTDKVS 466

Query: 391 MLDEAIEYLKSLQLQVQMMSMGCGMV-PMMFPG-VQQFMPPMGXXXXXXXXXXXXXGVSR 450
           ML++ IEY+KSLQLQ+QMMSMG GM+ PMM  G  QQFMP M              G++R
Sbjct: 467 MLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMA---------MGMKGMNR 497

Query: 451 --PMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQNSRIQETNQSN--QLHSLP 492
             P +P+P    G  FPR    A +GP  S+PA      +++  + ++ +   LHS P
Sbjct: 527 PPPFVPFP----GKTFPRPGHMAGVGP--SYPALRYPFPDTQASDLSRVHVPSLHSNP 497

[Close]

BLAST of Carg05409 vs. Swiss-Prot
Match: sp|Q9SVU7|BH056_ARATH (Putative transcription factor bHLH056 OS=Arabidopsis thaliana OX=3702 GN=BHLH56 PE=3 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-29
Identity = 150/454 (33.04%), Postives = 196/454 (43.17%), Query Frame = 0


Query: 32  DGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSG-DNQPLQQEEP----PQLFMQ 91
           + +++ELLWQ+GQV+  NQ  +     PP         G +N PL Q  P      LF+Q
Sbjct: 19  EDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPPHLHQQNLFIQ 78

Query: 92  EDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGVEFQPLTTTA 151
           E EM SWLH+     S  +N FC+ELL +S P +  Q+            +   P  T A
Sbjct: 79  EGEMYSWLHH-----SYRQNYFCSELL-NSTPATHPQS-----------SISLAPRQTIA 138

Query: 152 TSTMAARPPIPPMRRTEPETEVNNFGLFS-----RFTPTVESPPSNSKSIVRESPVVGS- 211
           T            RR E      NF  FS      FT         S S+VRES  VGS 
Sbjct: 139 T------------RRAE------NFMNFSWLRGNIFTGGRVDEAGPSFSVVRESMQVGSN 198

Query: 212 ----TSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIG 271
               +SS+T    + +T+       TA    G LA   +   G A      G     +  
Sbjct: 199 TTPPSSSATESCVIPATE------GTASRVSGTLAAHDLGRKGKAVAVEAAGTPSSGVCK 258

Query: 272 GETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVH 331
            ETE +Q   + E + +  +E                 T   ++ARGSTS KRSR AE+H
Sbjct: 259 AETEPVQIQPATESKLKAREE-----------------THGTEEARGSTSRKRSRTAEMH 318

Query: 332 NLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVD 391
           NL+ER                               RRR++INEKMK LQ+LIPRCNK  
Sbjct: 319 NLAER-------------------------------RRREKINEKMKTLQQLIPRCNKST 364

Query: 392 KASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPG-VQQFMPPMGXXXXXXXXXXXXXGV 451
           K S LD+AIEY+KSLQ Q+Q M     M PMM  G  QQFMP M                
Sbjct: 379 KVSTLDDAIEYVKSLQSQIQGM-----MSPMMNAGNTQQFMPHMAMDMNRPP-------- 364

Query: 452 SRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAF 470
             P +P+P    G  FP  +  A +GP++  P +
Sbjct: 439 --PFIPFP----GTSFPMPAQMAGVGPSYPAPRY 364

[Close]

BLAST of Carg05409 vs. Swiss-Prot
Match: sp|Q10CH5|PIL13_ORYSJ (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL13 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.1e-26
Identity = 86/203 (42.36%), Postives = 100/203 (49.26%), Query Frame = 0


Query: 296 DVKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRR 355
           + K  +R   S +R+RAAEVHNLSER                               RRR
Sbjct: 205 ETKSSSRRYGSKRRTRAAEVHNLSER-------------------------------RRR 264

Query: 356 DRINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQF 415
           DRINEKM+ALQELIP CNK DKAS+LDEAIEYLKSLQ+QVQ+M M  GM PMMFPG  QF
Sbjct: 265 DRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMFPGAHQF 324

Query: 416 MPPMGXXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQN 475
           MPPM                    +PY N       P  S  A + P       N+A+Q 
Sbjct: 325 MPPMAVGMNSACMPAAQGLSHMSRLPYMNHSMPNHIPLNSSPA-MNP------MNVANQM 369

Query: 476 SRIQETNQSNQLHSLPGMKNINP 499
             IQ    SN      G + + P
Sbjct: 385 QNIQLREASNPFLHPDGWQTVPP 369

[Close]

BLAST of Carg05409 vs. Swiss-Prot
Match: sp|Q9SVU6|BH023_ARATH (Transcription factor bHLH23 OS=Arabidopsis thaliana OX=3702 GN=BHLH23 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-21
Identity = 147/463 (31.75%), Postives = 194/463 (41.90%), Query Frame = 0


Query: 30  MSDGEVMELLWQNGQVIMQNQNQKSRTKSPPSTTAEQITSGDNQPLQQE----------- 89
           M + +++ELL ++ QV+  +Q Q       PS     I  G                   
Sbjct: 22  MGEDDIVELLGKSSQVVTSSQTQ------TPSCDPPLILRGXXXXXXXXXXXXXXXXXXL 81

Query: 90  -EPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQSIEQNDGVSSQIRTSPGV 149
                LF+QEDEM SWLH P       ++   ++LLY           GV+S    S   
Sbjct: 82  YHQQSLFIQEDEMASWLHQP-----NRQDYLYSQLLY----------SGVASTHPQSLAS 141

Query: 150 EFQPLTTTATSTMAARPPIPPMRRTEPETEVNNFGLFSR-----FTPTVESPPSNSKSIV 209
              P    A   +AA  P   +     E    NF   SR     F   VE+ PSNS  + 
Sbjct: 142 LEPPPPPRAQYILAADRPTGHIL---AERRAENFMNISRQRGNIFLGGVEAVPSNSTLL- 201

Query: 210 RESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMSGGGVAATSTGNGVGLM 269
                     SS T     +  +E R T T   S    A   +   G A      G    
Sbjct: 202 ----------SSATESIPATHGTESRATVTGGVS-RTFAVPGLGPRGKAVAIETAGTQSW 261

Query: 270 KMIGGETESIQRTMSLE-----DRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTST 329
            +   ETE +QR  + E     +RKRK +E           +VE + T+   +AR STS+
Sbjct: 262 GLCKAETEPVQRQPATETDITDERKRKTRE---------ETNVENQGTE---EARDSTSS 321

Query: 330 KRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQE 389
           KRSRAA +H LSER                               RRR +INE MKALQE
Sbjct: 322 KRSRAAIMHKLSER-------------------------------RRRQKINEMMKALQE 381

Query: 390 LIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMV-PMMFPG--VQQFMPPMGXXXX 449
           L+PRC K D++SMLD+ IEY+KSLQ Q+QM SMG  M+ PMM+ G   QQ+MP M     
Sbjct: 382 LLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMA---- 386

Query: 450 XXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQ-LGPTFSF 467
                    G++RP    P       FPRQ+  A+ +GP   F
Sbjct: 442 --------MGMNRPPAFIP-------FPRQAHMAEGVGPVDLF 386

[Close]

BLAST of Carg05409 vs. TrEMBL
Match: tr|A0A1S3BHU1|A0A1S3BHU1_CUCME (transcription factor PIF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489817 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 2.9e-175
Identity = 365/507 (71.99%), Postives = 404/507 (79.68%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSL-SNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSP 60
           MN+CVPDFE DED  L S+SSV SR KTSSM DGEVMELLWQNGQV+M + NQKSR KSP
Sbjct: 1   MNYCVPDFETDEDSLLPSSSSVPSRSKTSSMLDGEVMELLWQNGQVVMHSPNQKSRMKSP 60

Query: 61  PSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQ 120
            STTAEQIT+ D + + Q+E PQLFMQEDEMISWLHYPLVDDSTLENSFC+ELLY S+PQ
Sbjct: 61  QSTTAEQITNRDTRRMSQQEEPQLFMQEDEMISWLHYPLVDDSTLENSFCDELLYPSNPQ 120

Query: 121 SIEQNDGVSSQIRTSPGVEFQPLTT---TATSTMAARPPIPPMRRTEPETEVNNFGLFSR 180
           SIE+N GVS+Q+R + G+EF+PLT    TATSTM ARPP PPMRRTE ET+VN+FGLFSR
Sbjct: 121 SIERNAGVSAQVRATHGMEFRPLTAMTRTATSTMVARPPNPPMRRTETETKVNSFGLFSR 180

Query: 181 FTPTVESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMS 240
              ++ES PSNSKS+VRES VVGSTSS+TTVLT E+  SE++RTA  D   G L C+   
Sbjct: 181 HPRSIESAPSNSKSMVRESTVVGSTSSNTTVLTPETRSSEVQRTAITDILSGGLTCS--- 240

Query: 241 GGGVAATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATD 300
            GGVAA STGN   LMKM+  ETE +QRT SLEDRKRKGKE DDSDY CYS DVEFE+TD
Sbjct: 241 -GGVAALSTGNAGELMKMVVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTDVEFESTD 300

Query: 301 VKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRD 360
            KKQ RGSTSTKRSRAAEVHNLSER                               RRRD
Sbjct: 301 AKKQVRGSTSTKRSRAAEVHNLSER-------------------------------RRRD 360

Query: 361 RINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFM 420
           RINEKMKALQELIPRCNK DKASMLDEAIEYLK+LQLQVQMMSMGCGMVPMM+PGVQQFM
Sbjct: 361 RINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVPMMYPGVQQFM 420

Query: 421 PPMGXXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQN- 480
           PPMGXXXXXXXXXXXXX V+RPMMPYPNMLAGPMFPR +GA QLGP+FSFP F+MAH + 
Sbjct: 421 PPMGXXXXXXXXXXXXXXVNRPMMPYPNMLAGPMFPRLAGATQLGPSFSFPPFHMAHVSN 472

Query: 481 ---SRIQETNQSNQLHSLPGMKNINPP 500
              SRIQETNQS+Q+HS  GM+NIN P
Sbjct: 481 ADPSRIQETNQSDQMHSSSGMQNINLP 472

[Close]

BLAST of Carg05409 vs. TrEMBL
Match: tr|A0A0A0LE09|A0A0A0LE09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622450 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.3e-170
Identity = 364/509 (71.51%), Postives = 400/509 (78.59%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSL-SNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSP 60
           MN+CVPDFE DED  L S+SSV SR KTSSM DGEVMELL QNGQV+MQ+ NQKSR KSP
Sbjct: 1   MNYCVPDFETDEDSLLPSSSSVPSRSKTSSMLDGEVMELLCQNGQVVMQSPNQKSRMKSP 60

Query: 61  PSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQ 120
            STTAEQIT+ D +P+ Q+E PQLFMQEDEMISWLHYPLVDDSTLENSF +ELLY S+PQ
Sbjct: 61  QSTTAEQITNRDTRPMSQQEEPQLFMQEDEMISWLHYPLVDDSTLENSFRDELLYPSNPQ 120

Query: 121 SIEQNDGVSSQIRTSPGVEFQPL---TTTATSTMAARPPIPPMRRTEPETEVNNFGLFSR 180
           SIEQN  VS+Q+RT+ G+EF+PL   TTTATSTM ARPPIPPMRRTEPET+VN+FG FS 
Sbjct: 121 SIEQNAVVSAQVRTTDGMEFRPLTAMTTTATSTMVARPPIPPMRRTEPETKVNSFGRFSG 180

Query: 181 FTPTVESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMS 240
               +ES PSNSK++VRES VVGSTSS+T VLT E+  SE++RTA  D     LAC+   
Sbjct: 181 HARRIESAPSNSKNMVRESTVVGSTSSNTMVLTPETRSSEVQRTAITDIPSCGLACS--- 240

Query: 241 GGGVAATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATD 300
            GGVAA STGNG  LMKMI  ETE +QRT SLEDRKRKGKE DDSDY CYS DVEFE+TD
Sbjct: 241 -GGVAAPSTGNGGELMKMIVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTDVEFESTD 300

Query: 301 VKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRD 360
            KKQ RGSTSTKRSRAAEVHNLSER                               RRRD
Sbjct: 301 AKKQVRGSTSTKRSRAAEVHNLSER-------------------------------RRRD 360

Query: 361 RINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGVQQFM 420
           RINEKMKALQELIPRCNK DKASMLDEAIEYLK+LQLQVQMMSMGCGMVPMMFPG QQFM
Sbjct: 361 RINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVPMMFPGAQQFM 420

Query: 421 PPMG--XXXXXXXXXXXXXGVSRPMMPYPNMLAGPMFPRQSGAAQLGPTFSFPAFNMAHQ 480
           PPMG  XXXXXXXXXXXX GV+RPMMPYPNMLAG MFP Q+GA QLGP+ SFP F+MAH 
Sbjct: 421 PPMGXXXXXXXXXXXXXXAGVNRPMMPYPNMLAGQMFPWQAGATQLGPSLSFPPFHMAHV 474

Query: 481 N----SRIQETNQSNQLHSLPGMKNINPP 500
           +    SRIQETNQS+Q+HS   M+NIN P
Sbjct: 481 SNTDPSRIQETNQSDQMHSSSEMQNINLP 474

[Close]

BLAST of Carg05409 vs. TrEMBL
Match: tr|A0A1S3BI35|A0A1S3BI35_CUCME (transcription factor PIF1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489817 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.5e-134
Identity = 281/407 (69.04%), Postives = 312/407 (76.66%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSL-SNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSP 60
           MN+CVPDFE DED  L S+SSV SR KTSSM DGEVMELLWQNGQV+M + NQKSR KSP
Sbjct: 1   MNYCVPDFETDEDSLLPSSSSVPSRSKTSSMLDGEVMELLWQNGQVVMHSPNQKSRMKSP 60

Query: 61  PSTTAEQITSGDNQPLQQEEPPQLFMQEDEMISWLHYPLVDDSTLENSFCNELLYHSDPQ 120
            STTAEQIT+ D + + Q+E PQLFMQEDEMISWLHYPLVDDSTLENSFC+ELLY S+PQ
Sbjct: 61  QSTTAEQITNRDTRRMSQQEEPQLFMQEDEMISWLHYPLVDDSTLENSFCDELLYPSNPQ 120

Query: 121 SIEQNDGVSSQIRTSPGVEFQPLTT---TATSTMAARPPIPPMRRTEPETEVNNFGLFSR 180
           SIE+N GVS+Q+R + G+EF+PLT    TATSTM ARPP PPMRRTE ET+VN+FGLFSR
Sbjct: 121 SIERNAGVSAQVRATHGMEFRPLTAMTRTATSTMVARPPNPPMRRTETETKVNSFGLFSR 180

Query: 181 FTPTVESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELRRTATADASIGDLACAVMS 240
              ++ES PSNSKS+VRES VVGSTSS+TTVLT E+  SE++RTA  D   G L C+   
Sbjct: 181 HPRSIESAPSNSKSMVRESTVVGSTSSNTTVLTPETRSSEVQRTAITDILSGGLTCS--- 240

Query: 241 GGGVAATSTGNGVGLMKMIGGETESIQRTMSLEDRKRKGKEMDDSDYQCYSPDVEFEATD 300
            GGVAA STGN   LMKM+  ETE +QRT SLEDRKRKGKE DDSDY CYS DVEFE+TD
Sbjct: 241 -GGVAALSTGNAGELMKMVVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTDVEFESTD 300

Query: 301 VKKQARGSTSTKRSRAAEVHNLSERVSNLLLLYKGQCSFFCVFVIRLFMENIPTLQRRRD 360
            KKQ RGSTSTKRSRAAEVHNLSER                               RRRD
Sbjct: 301 AKKQVRGSTSTKRSRAAEVHNLSER-------------------------------RRRD 360

Query: 361 RINEKMKALQELIPRCNKVDKASMLDEAIEYLKSLQLQVQMMSMGCG 404
           RINEKMKALQELIPRCNK DKASMLDEAIEYLK+LQLQVQ +  G G
Sbjct: 361 RINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQSIRRGKG 372

[Close]

BLAST of Carg05409 vs. TrEMBL
Match: tr|A0A2I4GA54|A0A2I4GA54_9ROSI (transcription factor PIF1-like OS=Juglans regia OX=51240 GN=LOC109006060 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.1e-94
Identity = 274/538 (50.93%), Postives = 330/538 (61.34%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           M HCVPDFE D+D+SL +SS  +R + SS+   E++ELLWQNGQV+MQ+QNQ+S   SPP
Sbjct: 1   MYHCVPDFEMDDDYSLPSSSGAARPRKSSLPQDEIVELLWQNGQVVMQSQNQRSMRVSPP 60

Query: 61  S------TTAEQITSGDNQPLQQEEP------PQLFMQEDEMISWLHYPLVDDS-TLENS 120
           S        AEQ  + + +  QQE+         LFMQEDEM SWLHYPLVDD   L+++
Sbjct: 61  SKYSDAVIPAEQSAAREIRSSQQEQESAEHQHQNLFMQEDEMTSWLHYPLVDDDPALDHN 120

Query: 121 FCNELLYHSDPQSIE-QNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTE-PE 180
           FC +LLY    QS    N+  +  IRTS   E +P  T      A+RPPIPP R TE  +
Sbjct: 121 FCADLLYPPLNQSNNIGNNNTNPTIRTSSVTELRPAVTGGVG--ASRPPIPPARMTELAD 180

Query: 181 TEVNNFGLFS----RFTPTV-ESPPSNSKS--IVRESPVVGSTSSSTTVLTLESTDSELR 240
           +++ NF  FS    RF   V ++ PS+SKS  +VRES VV   SS T V   ES      
Sbjct: 181 SKMQNFMHFSGHKARFIGGVDQTEPSSSKSMVVVRESTVV--DSSDTPVAGPES----WA 240

Query: 241 RTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIGGET--------ESIQRTMSL-- 300
           R+A   +  GD  CA +S G  A TS+  G    +M+  E          S     SL  
Sbjct: 241 RSAAEASDFGDRGCATLSCGDGAGTSSA-GAAAKEMMSCEVTVTSSPGCSSASGEPSLKP 300

Query: 301 --EDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVHNLSERVSNLL 360
             EDRKRKG+  +D+D  C+  D EFE+ D KK+ RGSTSTKRSRAAEVHNLSER     
Sbjct: 301 PAEDRKRKGRNAEDAD--CHCEDAEFESGDTKKRVRGSTSTKRSRAAEVHNLSER----- 360

Query: 361 LLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVDKASMLDEAIE 420
                                     RRRDRINEKM+ALQELIPRCNK DKASMLDEAIE
Sbjct: 361 --------------------------RRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 420

Query: 421 YLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMGXXXXXXXXXXXXXGVSRPMMPYPNML 480
           YLKSLQLQVQMMSMGCGMVPMMFPGVQQ+MP M  XXXXXXXXXXXX ++RPM+P+PN+L
Sbjct: 421 YLKSLQLQVQMMSMGCGMVPMMFPGVQQYMPAM--XXXXXXXXXXXXXINRPMIPFPNLL 480

Query: 481 AGPMFPRQSGAAQLGPTFSFPAFNM----AHQNSRIQETNQSNQ-LHSLPGMKNINPP 500
           AG   P  + AA LGP F  PAF+M    A   S IQ TNQS Q LHS+ G ++ + P
Sbjct: 481 AGSALPTSAAAAHLGPRFPMPAFHMPPVPAPDPSGIQATNQSEQMLHSI-GTQHTSQP 493

[Close]

BLAST of Carg05409 vs. TrEMBL
Match: tr|A0A2I4ELR4|A0A2I4ELR4_9ROSI (transcription factor PIF1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108990727 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.8e-91
Identity = 263/539 (48.79%), Postives = 322/539 (59.74%), Query Frame = 0


Query: 1   MNHCVPDFERDEDFSLSNSSVQSRFKTSSMSDGEVMELLWQNGQVIMQNQNQKSRTKSPP 60
           MNHCVPDFE D+D+SL +SS  +R + SS+ + E+MELLWQNGQV+MQ+QNQ+S  +SPP
Sbjct: 1   MNHCVPDFEMDDDYSLPSSSGAARPRKSSLPEDEIMELLWQNGQVVMQSQNQRSMRRSPP 60

Query: 61  ST------TAEQITSGDNQPLQQEEP------PQLFMQEDEMISWLHYPLVDDS-TLENS 120
           S        A+Q  + + +  Q+E+         LFMQEDEM SWLHYPLVDD   L+++
Sbjct: 61  SKYNNAVFPADQSANREIRSSQEEQESATHQHQHLFMQEDEMASWLHYPLVDDDPALDHN 120

Query: 121 FCNELLYHSDPQSIE-QNDGVSSQIRTSPGVEFQPLTTTATSTMAARPPIPPMRRTE-PE 180
           FC +LLY +  QS    N   +  +RT+   E +   T    T  +RPPIPP RRT+  +
Sbjct: 121 FCADLLYPTPNQSNNITNTNANLVVRTNDVTELRQKVTGGAGT--SRPPIPPGRRTDLAD 180

Query: 181 TEVNNFGLFSR-------FTPTVESPPSNSKSIVRESPVVGSTSSSTTVLTLESTDSELR 240
           + V NF  FSR          +   P S S ++VRES VV   SS T V+  ES      
Sbjct: 181 SNVQNFMHFSRPKGRLAAGVDSTRPPSSKSMAVVRESTVV--DSSETPVVGPES----WT 240

Query: 241 RTATADASIGDLACAVMSGGGVAATSTGNGVGLMKMIGGE-------------TESIQRT 300
           R+A   +  G+  C  MS   VA TS+  G G  +M+  E              E  ++ 
Sbjct: 241 RSAAEASDFGNRGCPTMSCDAVAGTSSA-GAGGKEMMSCEVTLTSSSGCSSASAEPARKP 300

Query: 301 MSLEDRKRKGKEMDDSDYQCYSPDVEFEATDVKKQARGSTSTKRSRAAEVHNLSERVSNL 360
               +RKRKG E +D+D  C+  DVEFE+   KKQ  GSTSTKRSRAAEVHNLSER    
Sbjct: 301 PVDYNRKRKGIEAEDAD--CHCEDVEFESVAAKKQVHGSTSTKRSRAAEVHNLSER---- 360

Query: 361 LLLYKGQCSFFCVFVIRLFMENIPTLQRRRDRINEKMKALQELIPRCNKVDKASMLDEAI 420
                                      RRRDRINEKMKALQELIPRCNK DKASMLDEAI
Sbjct: 361 ---------------------------RRRDRINEKMKALQELIPRCNKSDKASMLDEAI 420

Query: 421 EYLKSLQLQVQMMSMGCGMVPMMFPGVQQFMPPMGXXXXXXXXXXXXXGVSRPMMPYPNM 480
           EYLKSLQLQVQMMSMGCGMVPMMFPGVQQ+MP M  XXXXXXXXXXXX   R M+P+PNM
Sbjct: 421 EYLKSLQLQVQMMSMGCGMVPMMFPGVQQYMPAM--XXXXXXXXXXXXXXXRSMIPFPNM 480

Query: 481 LAGPMFPRQSGAAQLGPTFSFPAFNM----AHQNSRIQETNQSNQ-LHSLPGMKNINPP 500
           LAG      + AA LGP +  PAF+M    A   SRIQ TN+  Q LHS+ G ++ + P
Sbjct: 481 LAGSALQTSAAAAHLGPRYPMPAFHMPPVPAPDPSRIQATNRPQQMLHSI-GTQHTSQP 494

The following BLAST results are available for this feature:

BLAST of Carg05409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554099.1	4.3e-239	91.78	transcription factor PIF1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_02355...	[more]
XP_023554098.1	4.3e-239	91.78	transcription factor PIF1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022963680.1	1.7e-235	90.78	transcription factor PIF1-like isoform X2 [Cucurbita moschata] >XP_022963681.1 t...	[more]
XP_022963679.1	1.7e-235	90.78	transcription factor PIF1-like isoform X1 [Cucurbita moschata]	[more]
XP_022967234.1	1.1e-234	90.38	transcription factor PIF1-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg05409 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20180.2	2.0e-44	34.71	phytochrome interacting factor 3-like 5	[more]
AT4G28811.1	8.5e-32	32.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G28800.1	1.6e-30	33.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G28790.1	5.5e-23	31.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09530.1	8.0e-22	30.32	phytochrome interacting factor 3	[more]

BLAST of Carg05409 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GZM7\|PIF1_ARATH	3.5e-43	34.71	Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1	[more]
sp\|Q8GT73\|BH119_ARATH	1.5e-30	32.22	Transcription factor bHLH119 OS=Arabidopsis thaliana OX=3702 GN=BHLH119 PE=2 SV=...	[more]
sp\|Q9SVU7\|BH056_ARATH	2.9e-29	33.04	Putative transcription factor bHLH056 OS=Arabidopsis thaliana OX=3702 GN=BHLH56 ...	[more]
sp\|Q10CH5\|PIL13_ORYSJ	5.1e-26	42.36	Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subs...	[more]
sp\|Q9SVU6\|BH023_ARATH	1.0e-21	31.75	Transcription factor bHLH23 OS=Arabidopsis thaliana OX=3702 GN=BHLH23 PE=2 SV=1	[more]

BLAST of Carg05409 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BHU1\|A0A1S3BHU1_CUCME	2.9e-175	71.99	transcription factor PIF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348981...	[more]
tr\|A0A0A0LE09\|A0A0A0LE09_CUCSA	1.3e-170	71.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622450 PE=4 SV=1	[more]
tr\|A0A1S3BI35\|A0A1S3BI35_CUCME	2.5e-134	69.04	transcription factor PIF1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348981...	[more]
tr\|A0A2I4GA54\|A0A2I4GA54_9ROSI	1.1e-94	50.93	transcription factor PIF1-like OS=Juglans regia OX=51240 GN=LOC109006060 PE=4 SV...	[more]
tr\|A0A2I4ELR4\|A0A2I4ELR4_9ROSI	5.8e-91	48.79	transcription factor PIF1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108990...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05409-RA	Carg05409-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 348..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 478..492
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 478..499
None	No IPR available	PANTHER	PTHR12565:SF194	TRANSCRIPTION FACTOR PIF1-RELATED	coord: 75..321
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 353..489
None	No IPR available	PANTHER	PTHR12565:SF194	TRANSCRIPTION FACTOR PIF1-RELATED	coord: 353..489
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 75..321
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 349..397 e-value: 1.4E-12 score: 57.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 352..392 e-value: 1.5E-10 score: 40.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 342..391 score: 14.837
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 352..396 e-value: 3.66357E-13 score: 63.7723
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 352..420

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05409	Cla002749	Watermelon (97103) v1	carwmB0069
Carg05409	Csa3G622450	Cucumber (Chinese Long) v2	carcuB0072
Carg05409	MELO3C012808	Melon (DHL92) v3.5.1	carmeB0070
Carg05409	ClCG07G001610	Watermelon (Charleston Gray)	carwcgB0074
Carg05409	CSPI03G27130	Wild cucumber (PI 183967)	carcpiB0076
Carg05409	Cucsa.140430	Cucumber (Gy14) v1	carcgyB0078
Carg05409	CmaCh02G017040	Cucurbita maxima (Rimu)	carcmaB0093
Carg05409	CmaCh19G001330	Cucurbita maxima (Rimu)	carcmaB0092
Carg05409	CmoCh02G017470	Cucurbita moschata (Rifu)	carcmoB0100
Carg05409	CmoCh19G001530	Cucurbita moschata (Rifu)	carcmoB0099
Carg05409	Lsi05G010740	Bottle gourd (USVL1VR-Ls)	carlsiB066
Carg05409	Cp4.1LG15g01160	Cucurbita pepo (Zucchini)	carcpeB0101
Carg05409	Cp4.1LG05g00820	Cucurbita pepo (Zucchini)	carcpeB0107
Carg05409	CsGy3G025290	Cucumber (Gy14) v2	carcgybB0073
Carg05409	MELO3C012808.2	Melon (DHL92) v3.6.1	carmedB0071
Carg05409	CsaV3_3G028610	Cucumber (Chinese Long) v3	carcucB0080
Carg05409	Cla97C07G129860	Watermelon (97103) v2	carwmbB0071
Carg05409	Bhi05G000094	Wax gourd	carwgoB0087

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05409	Carg08924	Silver-seed gourd	carcarB086

The following block(s) are covering this gene:

None