Carg05344 (gene) Silver-seed gourd

NameCarg05344
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_010 : 1318825 .. 1321166 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCTGCAATCTTCTGTGACAAGAAGCCAAAGTCTTCTGCTCCCATGGTCCATGGAAGGAGTTGCACATTGGATTCTCCAAGTAAGCTATTTCCTACCCTATTTGCATGCTCAAACAATGCTACATTGTTAACCATTACTGGTGTATCCTCCATAAACTCCACTGAAGCATAACAATGGTGCACTACTGCTTGTGTGTTGATGACCTGTTGAAAAGAAATTAAGTTTTTCCCAGCTTCAAAAGTAATAAAGGAATTTGTTTAAGTTCATTAAGTGTAATGCATGTTATACCTCTCTGATCCTTTCCTTAAGGTAAGAGAGACCCTTAGGAGACAAGCTCCTAAAAGTTCCTCCAACTTTCACGGTTTCGGGAACGACATTATCTGCTTGCCCTCCATCAACAAATGCAACAGTCACCACCTACATTGCTGAGTATTAGTTAACTACGACCATGTTTGCAAGTTTCCTTGCTATGCATTACCTTTAAGTGTTGAATCTTGATGAGTAGTTAATAATTTTCTCATGTTATTCTGTTCTTATGATCCTAACAAACGGAGAAGATTAGGGACTTCATTTAGAAGGCACAAAACTTACTCCAGCCTCGAGAGGATCGGTTTCACGAGATACAATTTGTTGAAGAGCTTGAATTATAAAAGCTGTTGCTAGAACTGGGTCCTTCGTCTTATGTGGGGCTGCAGCATGTCCACCCTTTCCTCGTATCAAGGCCGAAAAGTGTCCTGCTCCCGCACATACTGGACCAGGCCTCGAGGCTATGACACCAGTTGGTAAGGTGGGCAAGACGTGCAATGCAAAGATTCCATCTATATCGTCAAGGGCATGTTCTTGTAGCAATTGATAAGCTCCATTACACTCTTCTCCTGGCTGGAAAACTAACTTCACAGTTCCCTTCAAATAACAACATATACAAGTAATCCTGGTCAGTCCCCTTCCCAGGTAACAGAATCGCACAAGTATGAAAATTTTTACCTTCAGTTTCTCTATTTTACTCTGTAATAACCTTGCTGCTCCTAATAGCATAGCAACATGTGAATCATGGCCACAGGCATGCATTTTACCTTCTACCTTGCTTTTGAATTCCCATTCTACCAGTTCCTTCAAAATTATATGAGACATATTTAGCTTGGAGAATCTGAACTGTTCATCAATTTGCACTCCTATTCTACCGTGGCATGATCTTCTCTATTGATGACAACAATTTGCAAGGTTGAATTTTAGTTTTGCAAAATGTAAATACCGGCACAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGATTTTTCCTTTCGGATTTCCCCTCAAGGCTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCCCTTCTCCAACCGATTTGGGATCTCACAATCCACCCCCTTCGAGGTCCAGCGTCTTCGCTGGCACACCATTTGGTGTCTGGCTCTAATACCATTTATAACAGCCCAAGTCCATCACTAACCGATATTGTCCTCTTTGGGGTTTTCTTTTCAGGCTTCCCCTCAAGGTTTTTAATACAGCGTCTATTAGAGAGAGATTTCCACACCTTTATAAAGAATGCTTCGTTTTCCTCTCCAATCAATGTGGAATCTCACCGATTATCAGACCTTAGAGCAAGGATAGAAAGCAATAAGGTTAGTTGAAGCAGTTTCTTGATATGCTATTCTGATATGGATATGTATGAAGTCTATCTCAGTTTTAGTAGCAAAATATAAATCTTTTTAGAGTCAAATGTCTTTTGCTTGCTCTACATTTTCCAAAGTTACTTTTGACAAATTACTTTCTTCCATTGTATTTGATCTGTATGCCATTTTCCGGTTTCATCTTTGTTTATAGAGAGTACCTGAAGAGGAAGGGCATCCATGTCTGCTCTAAGAGCAAAAACAGGTCTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCCCCTTTAATGGAAGCCACCACTCCAGTCTTGGCAACAGGCCATTGGTAACTGATGCCGAGCAAGTCGAGCTCAGACCTCACGAGTTGACTCGTTCTGTACTCTTCAAATCCCACCTCTGGATACTCATGAATTCTCCTTCTAACTCCTTTTATCCACTCCAGGAACTCCCCTTCCCTTGCCAAACCCAGTAACTTCCTTGTCAGTGAGTGTAGCTCCAACCCATCTCCACCGTGCTCCACCTCCGACGCCGACGGCCGCCACAACGCCACTCCAAAAACCAGCATCCAACAAAACAACTTGAACTCCATGCCGCCGCCGCCGCCTGCCATCTCAAAAACAAGTGCTTCCAATGGGTAA

mRNA sequence

ATGGTGGCTGCAATCTTCTGTGACAAGAAGCCAAAGTCTTCTGCTCCCATGGTCCATGGAAGGAGTTGCACATTGGATTCTCCAACTGTTGCTAGAACTGGGTCCTTCGTCTTATGTGGGGCTGCAGCATGTCCACCCTTTCCTCGTATCAAGGCCGAAAAGTGTCCTGCTCCCGCACATACTGGACCAGGCCTCGAGGCTATGACACCAGTTGCAATTGATAAGCTCCATTACACTCTTCTCCTGGCTGGAAAACTAACTTCACAGTTCCCTTCAAATAACAACATATACAAAGAGTACCTGAAGAGGAAGGGCATCCATGTCTGCTCTAAGAGCAAAAACAGGTCTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCCCCTTTAATGGAAGCCACCACTCCAGTCTTGGCAACAGGCCATTGGTAACTGATGCCGAGCAAGTCGAGCTCAGACCTCACGAGAACTCCCCTTCCCTTGCCAAACCCAGTAACTTCCTTGTCAGTGAGTGTAGCTCCAACCCATCTCCACCGTGCTCCACCTCCGACGCCGACGGCCGCCACAACGCCACTCCAAAAACCAGCATCCAACAAAACAACTTGAACTCCATGCCGCCGCCGCCGCCTGCCATCTCAAAAACAAGTGCTTCCAATGGGTAA

Coding sequence (CDS)

ATGGTGGCTGCAATCTTCTGTGACAAGAAGCCAAAGTCTTCTGCTCCCATGGTCCATGGAAGGAGTTGCACATTGGATTCTCCAACTGTTGCTAGAACTGGGTCCTTCGTCTTATGTGGGGCTGCAGCATGTCCACCCTTTCCTCGTATCAAGGCCGAAAAGTGTCCTGCTCCCGCACATACTGGACCAGGCCTCGAGGCTATGACACCAGTTGCAATTGATAAGCTCCATTACACTCTTCTCCTGGCTGGAAAACTAACTTCACAGTTCCCTTCAAATAACAACATATACAAAGAGTACCTGAAGAGGAAGGGCATCCATGTCTGCTCTAAGAGCAAAAACAGGTCTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCCCCTTTAATGGAAGCCACCACTCCAGTCTTGGCAACAGGCCATTGGTAACTGATGCCGAGCAAGTCGAGCTCAGACCTCACGAGAACTCCCCTTCCCTTGCCAAACCCAGTAACTTCCTTGTCAGTGAGTGTAGCTCCAACCCATCTCCACCGTGCTCCACCTCCGACGCCGACGGCCGCCACAACGCCACTCCAAAAACCAGCATCCAACAAAACAACTTGAACTCCATGCCGCCGCCGCCGCCTGCCATCTCAAAAACAAGTGCTTCCAATGGGTAA

Protein sequence

MVAAIFCDKKPKSSAPMVHGRSCTLDSPTVARTGSFVLCGAAACPPFPRIKAEKCPAPAHTGPGLEAMTPVAIDKLHYTLLLAGKLTSQFPSNNNIYKEYLKRKGIHVCSKSKNRSRRRRRRRRRRRRRRSSSPFNGSHHSSLGNRPLVTDAEQVELRPHENSPSLAKPSNFLVSECSSNPSPPCSTSDADGRHNATPKTSIQQNNLNSMPPPPPAISKTSASNG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05344-RACarg05344-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg05344Wax gourdcarwgoB0939
Carg05344Wax gourdcarwgoB0945
Carg05344Silver-seed gourdcarcarB280
Carg05344Silver-seed gourdcarcarB292
Carg05344Cucumber (Gy14) v2carcgybB0796
Carg05344Cucumber (Gy14) v1carcgyB0916
Carg05344Cucumber (Gy14) v1carcgyB0923
Carg05344Cucurbita maxima (Rimu)carcmaB1129
Carg05344Cucurbita maxima (Rimu)carcmaB1117
Carg05344Cucurbita maxima (Rimu)carcmaB1125
Carg05344Cucurbita moschata (Rifu)carcmoB1088
Carg05344Cucurbita moschata (Rifu)carcmoB1095
Carg05344Cucurbita moschata (Rifu)carcmoB1099
Carg05344Cucurbita pepo (Zucchini)carcpeB1141
Carg05344Cucurbita pepo (Zucchini)carcpeB1128
Carg05344Cucurbita pepo (Zucchini)carcpeB1138
Carg05344Wild cucumber (PI 183967)carcpiB0842
Carg05344Wild cucumber (PI 183967)carcpiB0846
Carg05344Wild cucumber (PI 183967)carcpiB0847
Carg05344Cucumber (Chinese Long) v2carcuB0822
Carg05344Cucumber (Chinese Long) v2carcuB0826
Carg05344Cucumber (Chinese Long) v3carcucB0846
Carg05344Cucumber (Chinese Long) v3carcucB0850
Carg05344Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05344Bottle gourd (USVL1VR-Ls)carlsiB744
Carg05344Melon (DHL92) v3.5.1carmeB0803
Carg05344Melon (DHL92) v3.5.1carmeB0805
Carg05344Melon (DHL92) v3.6.1carmedB0816
Carg05344Melon (DHL92) v3.6.1carmedB0815
Carg05344Watermelon (Charleston Gray)carwcgB0776
Carg05344Watermelon (Charleston Gray)carwcgB0787
Carg05344Watermelon (97103) v1carwmB0800
Carg05344Watermelon (97103) v1carwmB0807
Carg05344Watermelon (97103) v1carwmB0814
Carg05344Watermelon (97103) v2carwmbB0840
Carg05344Watermelon (97103) v2carwmbB0849