Carg05299 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05299
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WD repeat-containing protein 44
Location	Cucurbita_argyrosperma_scaffold_010 : 1031427 .. 1035288 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAGTTCTGACAGAGACACAGATGTTTTCTTCGACTCAGAAGATTACTTGCCATTAGAGGACTCCTTGGTAGCAGAAGAAGTGGGTTCCAACAAGTTGGGATATGAAATATGGATGAGTGAGCCACAGAGCATTAAGAGGAGAAGACAGCGTTTTCTTCAAGAAGTTGGATTACTTGAATTTGCGTCTTCAAGAACTTGTGCACATGATTTAGTGATTGAATCAAGTGATTCATCAGGGAGGATGGAATTGGAGAGACTTACAGAATTCAGTGGAGCTGTCTCAAGTTCTGACTATGCTCCTACCTGTAATGTGGAGGAGAATGATTTAGAACTATGCTCAAATGAGATGCTTCTACCAGTTTCTGTTTCGAACTCCGGTTCTCGACGTTGCCATGGCGAAGCTGATGTCGAAGGTTGCCGGGATATTGATGTCGGTAAAAGGAAAATAAAGAAGTGGTGGAGATCATTCAAGAACAAGGCGGCGAGCTTAAGAAGTACAGAGTTTTCTGAGGAATTGAAAACAATCCCAGCAAAATCCAAAACTTGCAGAATGAAGGTGTATCAAAACAAGAAGAGATGCTCAGAGTTTAGTGCTTTGTATATGAGACAGCAGATTGTTGCACACAAGGGCTTGATTTGGACAATGAAGTTTAGTCCAGATGGGAAGTATTTGGCAAGCGGAGGAGAAGACGGAGTCGTACGCATGTGGCGTATATCGTCTGCAAATGCATCTACTGAATTCTTAGCAAATGATGGTAATTATAACAACAAACCAAGAGAAGGGAAGTCTAGCTTCAGCAGCAAACCGTTGAGATTTGCCACTGTTGTCATTCCTGAAAAGGTTTTTCAGATTGATGAGCAGCCAGTGCAAGAGTTCTATGGGCATTCCAGTGATGTCTTGGACATAGCTTGGTCCAATTCAAACGTAAGACATCTATGACAACTGTTTGTTTGTTTGTTTGTTTTTTGGACTGTCGAAGAAACAAAGCTAACTAGATCCTCTTGCTGCAGTGTCTTCTTTCATCATCAAAGGATAAAACTGTGCGCTTGTGGGGAGTTGGCTCTGATCAATGTCTTGGTGTTTTCCACCACAAGAACTATGGTCAGTTTTGAAATCCTGCATCCATTCAAGTTCTTGCTGTGGCTCCATTCTCTTTTCTAAACTGTTCTTACTTTGTTTATGGGATCAGTGACTTGTATCCAATTCAATCCAATGGATGAAAACTACTTCATCAGTGGCTCAATTGATGGCAAAATCCGAGTTTGGAGTGTGTTGAAACAGCGGGTGGTTGATTGGGCTGATGTCCGAGATGTCATTACTGCTTTAGCTTATCAACCAGATGGGAAGGTGCGAGTTGTGAACTCTCACAAATTGAATGTATATGTCTTACACAGAGCTCTGATCATACCTTGTTCTTCTATGTGAGCAGGGTTTTGCTATTGGCTCGATTACCGGCACGTGTCGTTTCTACAAAACATCAGGTACGAATCACGGTGCATTCGACAAATTCAATGTTGTATAATGATGCTGCCCTTCAACTCCTTTACTGATTTAGATTGTTGTGATTTTGTAGGTGATTATTTTCATTTGGATGCACAGATCAATGTTCAAGGGCGAAAAAAGGCCTCGGGCAAAAGGATCACTGGCATTCAGGTTTTGCTCAGGACTTTGATAGTTCCTTTGCTAAAGCATATCCTAAATACCATTGCCTTAACTTGAATGCCATTCTTTGCAGTTTTTCCGGGACAACTCTCAAAGAGTGATGATAACTTCGGAAGACTCGAAAGTACGCATATTCGAAGGAACCGAAATCGTCAACAAATATAAAGGTATGAATCCGGTCTGATTGGTTCAATTAGAACTCATTATCGTGGATGTTTTAGAAATCCCACGTCAGTTGGAGAGGTGAACGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTCACAGACGTGTTTTAAAACTGTGAGGTTGACGGCGATATGTAATGGGCCGAAGTGGACAATATTCGTTAGTGGTGGGCTTCGGCTATTACAAATGGTGTTAGAGCCAGACACTGAGCGGCGTGCCAGCGAGGAACTGGACTCCCAAAAGGGGTGGATTGTGAGATCCCACATCAGTTGGATAGTGAAACTAAGCATTTATTATAAGAGTATGAACCTCTCCCTAACATACGTGTTTTAAAACCATGAGATCAGTTGGAGAGTGAAACTAAGCATTCATTACAAGAGTATGAACCTCTCCCTAACAAACATGTTTTAAAACCGTAAGGCTGATAGCGATACATTCACCTCTGGCCCTCTCTTCTAGGAATCCATTTTTCAAAAGAAAAATGATTTCAACCGATGCTTAACATTACAACTATTGGTTTAGTGTTGAATGGTTAATTACTCAAAAATCTCTACAATTACCAAATAAGTTCATGCAAGCTGTTCTAGTTAAAGCATGAGGGGGTCTGCATTGACTTTCTGTCTATTCTCGTGTTTATTCATTTGAATTATTCATAAACAGTGATTGATAGCCATGAAAACCATATTTAATTATAAATCAGAGATGTCCATTGCATCTGCACTTGACTTGTAAAAATCTATTGATGGGAAGTTCTGTTTCTCTCTCATAATAGCTGTACACTGTTCTATCATATTATTGGCTTGAAATGAGGAAGGCCAGGGATGTTAGCTGATCTGTAGTTCAATGAATCTCTTAAGGTTTATATGCTTAGATTCTCGTTTCGAAATGCAGGTCTACCGAAGTCGGGGAGTCAGATGTCTGCTTCTTTTACAAAAAATGGGAAGCATATAATATCTGTAGGAGAGGACTCTCGTGTATATATGTGGAACTATGATAGTCTTCACCTCCCATCAATGAAAGAAACGAAATCTCAGCAGTCTTGCGAGCATTTCTTGTCTGATGGTGCTTCTGTTGCTATACCATGGCCTGGTGTTGGAACAGAGCTGAAATGCTTTGGCAACAACCAACGGCAGTTCTCACAGAGACAGGATAACCAAGGGGCTTCAGAGCGTTTTTCCCTTGCTAATTGGTTCTCTGCTGATAATCTGTGCCGTGGATCCGTAACATGGCCAGAAGAGAGGCTACCTCTCTGGGATTTACCAGTTGCAGATGATGAACATGGCAACCTGGAACACCATAATAGTCAGAGCGACGCCCAGGACCATGTAGCTCCACCCGACACATGGGGCCTTGTGATTGTCGTGGCTGGATTAGATGGAACTATAAAGACATTCCATAACTATGGATTGCCCATCAGGCTTTAGGAATCCAATTGAATTCCAGGAGCTTCTGAAAGCTAAAAAAATGGTTGATTCTTTCTCCTTTTTGTATCTTCCAGTCAGTGCTATAGAGAAAAGCTTTCTATTTGTTTATTCCTTCTAAAAATGTATGTTTTAGAGGTCTGAAAATTTGTAAATCTACCCCTTTTTTCTTCTTGTTTAGTTTATGTGAATATTACTGCGAATATAAATGGAATACACTAGGCAGATTTTTGGCATTTGAGTGATTTTTTCTCATTGACATGAAGAATTTGAATCTTCGACAAAACAACTCTGCTCTGCCTTGTTCTTGTATTTGAATCGGTAGTTTCCAGTCTTGGCACAAGTTTATGCAAATTGAAAGGAAACCCATTAATCGTTCATTCATTGATTACTTACCCTCCTTTTTGTTTGGGGAAAGGTAAGATTTTGAACGAATTAGAATGCGAGAGAATGAGAGTTGTGAATTGGGTCTGCAAAGAGAGAAGCTTAGCGACAGAAAATATTTTCTACCTCTCTTAAATCGTGCTTTGTTAGTGTGTTTAATCTCTTCATTGGTGCAAATTAATGGTGGGGACAGCGATT

mRNA sequence

ATGCTGAGTTCTGACAGAGACACAGATGTTTTCTTCGACTCAGAAGATTACTTGCCATTAGAGGACTCCTTGGTAGCAGAAGAAGTGGGTTCCAACAAGTTGGGATATGAAATATGGATGAGTGAGCCACAGAGCATTAAGAGGAGAAGACAGCGTTTTCTTCAAGAAGTTGGATTACTTGAATTTGCGTCTTCAAGAACTTGTGCACATGATTTAGTGATTGAATCAAGTGATTCATCAGGGAGGATGGAATTGGAGAGACTTACAGAATTCAGTGGAGCTGTCTCAAGTTCTGACTATGCTCCTACCTGTAATGTGGAGGAGAATGATTTAGAACTATGCTCAAATGAGATGCTTCTACCAGTTTCTGTTTCGAACTCCGGTTCTCGACGTTGCCATGGCGAAGCTGATGTCGAAGGTTGCCGGGATATTGATGTCGGTAAAAGGAAAATAAAGAAGTGGTGGAGATCATTCAAGAACAAGGCGGCGAGCTTAAGAAGTACAGAGTTTTCTGAGGAATTGAAAACAATCCCAGCAAAATCCAAAACTTGCAGAATGAAGGTGTATCAAAACAAGAAGAGATGCTCAGAGTTTAGTGCTTTGTATATGAGACAGCAGATTGTTGCACACAAGGGCTTGATTTGGACAATGAAGTTTAGTCCAGATGGGAAGTATTTGGCAAGCGGAGGAGAAGACGGAGTCGTACGCATGTGGCGTATATCGTCTGCAAATGCATCTACTGAATTCTTAGCAAATGATGGTAATTATAACAACAAACCAAGAGAAGGGAAGTCTAGCTTCAGCAGCAAACCGTTGAGATTTGCCACTGTTGTCATTCCTGAAAAGGTTTTTCAGATTGATGAGCAGCCAGTGCAAGAGTTCTATGGGCATTCCAGTGATGTCTTGGACATAGCTTGGTCCAATTCAAACTGTCTTCTTTCATCATCAAAGGATAAAACTGTGCGCTTGTGGGGAGTTGGCTCTGATCAATGTCTTGGTGTTTTCCACCACAAGAACTATGTGACTTGTATCCAATTCAATCCAATGGATGAAAACTACTTCATCAGTGGCTCAATTGATGGCAAAATCCGAGTTTGGAGTGTGTTGAAACAGCGGGTGGTTGATTGGGCTGATGTCCGAGATGTCATTACTGCTTTAGCTTATCAACCAGATGGGAAGGGTTTTGCTATTGGCTCGATTACCGGCACGTGTCGTTTCTACAAAACATCAGGTACGAATCACGGTGCATTCGACAAATTCAATGTTGTATAATGATGCTGCCCTTCAACTCCTTTACTGATTTAGATTGTTGTGATTTTGTAGGTGATTATTTTCATTTGGATGCACAGATCAATGTTCAAGGGCGAAAAAAGGCCTCGGGCAAAAGGATCACTGGCATTCAGTTTTTCCGGGACAACTCTCAAAGAGTGATGATAACTTCGGAAGACTCGAAAGTACGCATATTCGAAGGAACCGAAATCGTCAACAAATATAAAGGTCTACCGAAGTCGGGGAGTCAGATGTCTGCTTCTTTTACAAAAAATGGGAAGCATATAATATCTGTAGGAGAGGACTCTCGTGTATATATGTGGAACTATGATAGTCTTCACCTCCCATCAATGAAAGAAACGAAATCTCAGCAGTCTTGCGAGCATTTCTTGTCTGATGGTGCTTCTGTTGCTATACCATGGCCTGGTGTTGGAACAGAGCTGAAATGCTTTGGCAACAACCAACGGCAGTTCTCACAGAGACAGGATAACCAAGGGGCTTCAGAGCGTTTTTCCCTTGCTAATTGGTTCTCTGCTGATAATCTGTGCCGTGGATCCGTAACATGGCCAGAAGAGAGGCTACCTCTCTGGGATTTACCAGTTGCAGATGATGAACATGGCAACCTGGAACACCATAATAGTCAGAGCGACGCCCAGGACCATGTAGCTCCACCCGACACATGGGGCCTTGTGATTGTCGTGGCTGGATTAGATGGAACTATAAAGACATTCCATAACTATGGATTGCCCATCAGGCTTTAGGAATCCAATTGAATTCCAGGAGCTTCTGAAAGCTAAAAAAATGGTTGATTCTTTCTCCTTTTTGTATCTTCCAGTCAGTGCTATAGAGAAAAGCTTTCTATTTGTTTATTCCTTCTAAAAATGTATGTTTTAGAGGTCTGAAAATTTGTAAATCTACCCCTTTTTTCTTCTTGTTTAGTTTATGTGAATATTACTGCGAATATAAATGGAATACACTAGGCAGATTTTTGGCATTTGAGTGATTTTTTCTCATTGACATGAAGAATTTGAATCTTCGACAAAACAACTCTGCTCTGCCTTGTTCTTGTATTTGAATCGGTAGTTTCCAGTCTTGGCACAAGTTTATGCAAATTGAAAGGAAACCCATTAATCGTTCATTCATTGATTACTTACCCTCCTTTTTGTTTGGGGAAAGGTAAGATTTTGAACGAATTAGAATGCGAGAGAATGAGAGTTGTGAATTGGGTCTGCAAAGAGAGAAGCTTAGCGACAGAAAATATTTTCTACCTCTCTTAAATCGTGCTTTGTTAGTGTGTTTAATCTCTTCATTGGTGCAAATTAATGGTGGGGACAGCGATT

Coding sequence (CDS)

ATGCTGAGTTCTGACAGAGACACAGATGTTTTCTTCGACTCAGAAGATTACTTGCCATTAGAGGACTCCTTGGTAGCAGAAGAAGTGGGTTCCAACAAGTTGGGATATGAAATATGGATGAGTGAGCCACAGAGCATTAAGAGGAGAAGACAGCGTTTTCTTCAAGAAGTTGGATTACTTGAATTTGCGTCTTCAAGAACTTGTGCACATGATTTAGTGATTGAATCAAGTGATTCATCAGGGAGGATGGAATTGGAGAGACTTACAGAATTCAGTGGAGCTGTCTCAAGTTCTGACTATGCTCCTACCTGTAATGTGGAGGAGAATGATTTAGAACTATGCTCAAATGAGATGCTTCTACCAGTTTCTGTTTCGAACTCCGGTTCTCGACGTTGCCATGGCGAAGCTGATGTCGAAGGTTGCCGGGATATTGATGTCGGTAAAAGGAAAATAAAGAAGTGGTGGAGATCATTCAAGAACAAGGCGGCGAGCTTAAGAAGTACAGAGTTTTCTGAGGAATTGAAAACAATCCCAGCAAAATCCAAAACTTGCAGAATGAAGGTGTATCAAAACAAGAAGAGATGCTCAGAGTTTAGTGCTTTGTATATGAGACAGCAGATTGTTGCACACAAGGGCTTGATTTGGACAATGAAGTTTAGTCCAGATGGGAAGTATTTGGCAAGCGGAGGAGAAGACGGAGTCGTACGCATGTGGCGTATATCGTCTGCAAATGCATCTACTGAATTCTTAGCAAATGATGGTAATTATAACAACAAACCAAGAGAAGGGAAGTCTAGCTTCAGCAGCAAACCGTTGAGATTTGCCACTGTTGTCATTCCTGAAAAGGTTTTTCAGATTGATGAGCAGCCAGTGCAAGAGTTCTATGGGCATTCCAGTGATGTCTTGGACATAGCTTGGTCCAATTCAAACTGTCTTCTTTCATCATCAAAGGATAAAACTGTGCGCTTGTGGGGAGTTGGCTCTGATCAATGTCTTGGTGTTTTCCACCACAAGAACTATGTGACTTGTATCCAATTCAATCCAATGGATGAAAACTACTTCATCAGTGGCTCAATTGATGGCAAAATCCGAGTTTGGAGTGTGTTGAAACAGCGGGTGGTTGATTGGGCTGATGTCCGAGATGTCATTACTGCTTTAGCTTATCAACCAGATGGGAAGGGTTTTGCTATTGGCTCGATTACCGGCACGTGTCGTTTCTACAAAACATCAGGTACGAATCACGGTGCATTCGACAAATTCAATGTTGTATAA

Protein sequence

MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLLEFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLLPVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSGTNHGAFDKFNVV

Homology

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BLAST of Carg05299 vs. NCBI nr
Match: XP_022962704.1 (lissencephaly-1 homolog [Cucurbita moschata] >XP_022962705.1 lissencephaly-1 homolog [Cucurbita moschata] >XP_022962706.1 lissencephaly-1 homolog [Cucurbita moschata])

HSP 1 Score: 833.9 bits (2153), Expect = 2.4e-238
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL
Sbjct: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120
           EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL
Sbjct: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120

Query: 121 PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK 180
           PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK
Sbjct: 121 PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK 180

Query: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRI 240
           SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVR+WRI
Sbjct: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRVWRI 240

Query: 241 SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD 300
           SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD
Sbjct: 241 SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD 300

Query: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360
           VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID
Sbjct: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360

Query: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 412
           GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG
Sbjct: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 411

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BLAST of Carg05299 vs. NCBI nr
Match: XP_023003066.1 (WD repeat-containing protein YMR102C-like [Cucurbita maxima])

HSP 1 Score: 816.6 bits (2108), Expect = 3.9e-233
Identity = 401/411 (97.57%), Postives = 406/411 (98.78%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSDRDTDVFFDSEDYLPLEDSLVAEEV SNKLGYEIWMSEPQSIKRRRQRFLQEVGLL
Sbjct: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVDSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120
           EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL
Sbjct: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120

Query: 121 PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK 180
           PVSVSNSGSRRCHGEADVEGCRDIDV KRKIKKWWRSFKNKAASLR TEFSEELKTIPA+
Sbjct: 121 PVSVSNSGSRRCHGEADVEGCRDIDVSKRKIKKWWRSFKNKAASLRRTEFSEELKTIPAE 180

Query: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRI 240
           SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVR+WRI
Sbjct: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRVWRI 240

Query: 241 SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD 300
           SSAN S+EFLANDGN+NNKPREGKSS SSKPLRFATVVIPEKVFQIDEQPVQ+FYGHSSD
Sbjct: 241 SSANVSSEFLANDGNHNNKPREGKSSLSSKPLRFATVVIPEKVFQIDEQPVQKFYGHSSD 300

Query: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360
           VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID
Sbjct: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360

Query: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 412
           GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG
Sbjct: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 411

[Close]

BLAST of Carg05299 vs. NCBI nr
Match: XP_023518000.1 (lissencephaly-1 homolog [Cucurbita pepo subsp. pepo] >XP_023518001.1 lissencephaly-1 homolog [Cucurbita pepo subsp. pepo] >XP_023518002.1 lissencephaly-1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 814.7 bits (2103), Expect = 1.5e-232
Identity = 403/411 (98.05%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSDRDTDVFFDSEDYLPLEDSLVAEEVG NKLGYEIWMSEPQSIKRRRQRFLQEVGLL
Sbjct: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGFNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120
           EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL
Sbjct: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120

Query: 121 PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK 180
           PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTE     KTIPA+
Sbjct: 121 PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTE-----KTIPAE 180

Query: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRI 240
           SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVR+WRI
Sbjct: 181 SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRVWRI 240

Query: 241 SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD 300
           SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD
Sbjct: 241 SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD 300

Query: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360
           VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID
Sbjct: 301 VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID 360

Query: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 412
           GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG
Sbjct: 361 GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSG 406

[Close]

BLAST of Carg05299 vs. NCBI nr
Match: XP_022950097.1 (WD repeat-containing protein 44-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 572.4 bits (1474), Expect = 1.3e-159
Identity = 298/436 (68.35%), Postives = 330/436 (75.69%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSD D DVFFDSEDYLPLE+SLV EEV ++K GYEIWM EPQSIK+RR+ FLQEVGL 
Sbjct: 1   MLSSDGDADVFFDSEDYLPLEESLVTEEVDASKSGYEIWMREPQSIKKRREYFLQEVGLN 60

Query: 61  EFA-SSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEM- 120
           EFA SS T   D  IESS SSGR+EL+RLTE SGAVSSSDYAP+CNVE+ND  +  N+M 
Sbjct: 61  EFASSSSTRTQDSEIESSCSSGRIELDRLTECSGAVSSSDYAPSCNVEDNDSVVHHNDMP 120

Query: 121 ---------------LLPVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAA 180
                            P SVSNS  +RC GEA+VE C+DID  K+KI  WW+S KNKAA
Sbjct: 121 SAEFSNEANETNEATSRPSSVSNSSFQRCQGEANVEACKDIDARKKKILTWWKSLKNKAA 180

Query: 181 SLRSTEFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDG 240
            LR+TEFSEE K+ PAKS++CRMKV QNKK+CSEFSALYMRQQI AHKGLIWTMKFSPDG
Sbjct: 181 RLRATEFSEESKSNPAKSESCRMKVCQNKKKCSEFSALYMRQQICAHKGLIWTMKFSPDG 240

Query: 241 KYLASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKV 300
           KYLASGGEDGVVR+WR++  NAS+EFLAND       REGKSSFSSKPLRFATVVIP KV
Sbjct: 241 KYLASGGEDGVVRIWRVTRTNASSEFLANDAT-----REGKSSFSSKPLRFATVVIPAKV 300

Query: 301 FQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTC 360
           FQIDE PVQEF+GHSSDVLDIAWS SNCLLSSSKDKTVRLW VGSDQCL VFHHKNYVTC
Sbjct: 301 FQIDELPVQEFHGHSSDVLDIAWSTSNCLLSSSKDKTVRLWQVGSDQCLNVFHHKNYVTC 360

Query: 361 IQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGT 420
           IQFNPMDENYF+                                  PDGKGFA+GSITG+
Sbjct: 361 IQFNPMDENYFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGKGFAVGSITGS 420

[Close]

BLAST of Carg05299 vs. NCBI nr
Match: XP_004148673.1 (PREDICTED: WD repeat-containing protein 44 [Cucumis sativus] >XP_011657764.1 PREDICTED: WD repeat-containing protein 44 [Cucumis sativus] >XP_011657765.1 PREDICTED: WD repeat-containing protein 44 [Cucumis sativus] >KGN48370.1 hypothetical protein Csa_6G483500 [Cucumis sativus])

HSP 1 Score: 567.8 bits (1462), Expect = 3.1e-158
Identity = 291/421 (69.12%), Postives = 319/421 (75.77%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSD D DVFFDSEDYLPLE+SLVAEE   +KLGYEIWMSEPQSIK+RR+RFLQEVG +
Sbjct: 1   MLSSDGDADVFFDSEDYLPLEESLVAEEADFSKLGYEIWMSEPQSIKKRRERFLQEVGFV 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120
           +FASS TCA D  IESS SS RMELERLTE SGAVSSSDY P+CNVEENDL +C NEM  
Sbjct: 61  DFASSSTCAQDSEIESSCSSERMELERLTECSGAVSSSDYTPSCNVEENDLVVCHNEMQS 120

Query: 121 P----------VSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEF 180
                       SVS+S  RR  GEA+VE C+D DVGKRKI  WW+SFKNKAA  RS +F
Sbjct: 121 AEFDNEATSRLSSVSDSSFRRPQGEANVEACQDADVGKRKILTWWKSFKNKAARRRSADF 180

Query: 181 SEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGG 240
           S E +    KS++CRMKVYQ+KKRCSEFSALYMRQQI AHKGLIWTMKFSPDGKYLASGG
Sbjct: 181 SRESELNSPKSQSCRMKVYQHKKRCSEFSALYMRQQICAHKGLIWTMKFSPDGKYLASGG 240

Query: 241 EDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQP 300
           EDGVVR+WR++ ANAS+EFLA+DGNYN KP+EGKSSFSSKPLRFATVVIPEKVFQIDE P
Sbjct: 241 EDGVVRIWRVTYANASSEFLADDGNYNTKPKEGKSSFSSKPLRFATVVIPEKVFQIDELP 300

Query: 301 VQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMD 360
           +QE +GHSSD+LDIAWS SNCLLSSSKDKTVRLW V SDQCL VFHHKNYVTC+QFNPMD
Sbjct: 301 IQELHGHSSDILDIAWSTSNCLLSSSKDKTVRLWQVSSDQCLNVFHHKNYVTCVQFNPMD 360

Query: 361 ENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTS 412
           E                                              GSITGTCRFY+TS
Sbjct: 361 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSITGTCRFYETS 420

[Close]

BLAST of Carg05299 vs. TAIR10
Match: AT1G48870.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-80
Identity = 167/401 (41.65%), Postives = 222/401 (55.36%), Query Frame = 0


Query: 9   DVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLLEFASSRTC 68
           D+FFDS D L + + +V EE    +  +++W  EP S++ RR RFL+++GLLE      C
Sbjct: 13  DLFFDSSDVLSIGEQVVVEEEEVEEAEFQVWSGEPISVEERRVRFLKKMGLLE----ERC 72

Query: 69  AHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLLPVSVSNSG 128
              +V + SD         +T  S   S  D    C V E +                  
Sbjct: 73  LERMVSDYSD--------EVTSSSSDSSLCDSGLQCCVREENYGSXXXXXXXXXXXXXXX 132

Query: 129 SRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAKSKTCRMKV 188
                                     W  F   +A ++  +F    K   ++    ++KV
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXW-LFNCFSAGVKDKDF----KYKSSEETMSKVKV 192

Query: 189 YQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRIS-SANAST 248
             NKK   E SA YM Q+I  HKG IWT+KFSPDGKYLA+GGEDGVV++WRI+ S +   
Sbjct: 193 KTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLA 252

Query: 249 EFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWS 308
            FL      N +               A V+ P+K F I+E P QE YGH+ DVLD+AWS
Sbjct: 253 SFLRQQEPINQQA--------------ALVLFPQKAFHIEETPFQELYGHTGDVLDLAWS 312

Query: 309 NSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWS 368
           +SN LLS+SKDKTVRLW  G DQCL VFHH NYVTC++FNP+++N F SGSIDGK R+W 
Sbjct: 313 DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWG 372

Query: 369 VLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYK 409
           + ++RVV W DVRD I+A++YQP+G GF +G ITG CRFY+
Sbjct: 373 LSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQ 382

[Close]

BLAST of Carg05299 vs. TAIR10
Match: AT5G24320.2 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 251.5 bits (641), Expect = 9.0e-67
Identity = 165/480 (34.38%), Postives = 241/480 (50.21%), Query Frame = 0


Query: 2   LSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLG---YEIWMSEPQSIKRRRQRFLQEVG 61
           L  + +   FFD+ + +    S    E  S+  G   Y++W+  P + + RR++FL+ +G
Sbjct: 4   LIEEEEESRFFDAHEEIASCSSPCKIESPSSISGEFRYDVWIKSPGNTEERREKFLKWMG 63

Query: 62  LL--------------------------------EFASSRTCAHDLVIESSDSSGRMELE 121
           L                                 EF+SSR  +       S+S  R+  E
Sbjct: 64  LSSTVNESKSGNVYRLSSSVNESAVLMSLKSDDDEFSSSRCDS----FSPSESVDRVVNE 123

Query: 122 RLTEFSGAVSSSDYAPTCN-VEENDL--ELCSNEMLLPVSVSNSGSRRCHGEADV----- 181
            L +  G V S         V++ D+   LCS    L  S  +    + HGE  +     
Sbjct: 124 SLCKEEGEVDSGMVLRNLGFVDDGDISSSLCS----LSSSPVSDKIVKEHGEPKLLPDPM 183

Query: 182 --EGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIP-AKSKTCRMKVYQNKKRC 241
             E  R++    +++K+ W S   K  + RS    +    +    S+  R+KV + KK  
Sbjct: 184 VAEEEREVSGIMKRVKEKWLSRLYKVRNKRSAGGDDNGGEVAVCGSRIERVKVKEYKKEA 243

Query: 242 SEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEF------ 301
            E SAL+  Q+I AH+G I  MKFSPDG+YLAS GEDGV+R+W +       E       
Sbjct: 244 KELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKID 303

Query: 302 ------------------LANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPV 361
                             +  DG        G      K    A V+IP K+F++ ++P+
Sbjct: 304 PSCIYFEVSKLSELRPVAVEKDG------ITGSLMSPRKTTESACVIIPPKIFRVLDKPL 363

Query: 362 QEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDE 412
            EF GHS D+LDI+WS +N LLS+S D +VRLW +G + CLG+F H NYVT +QFNP+D+
Sbjct: 364 HEFLGHSGDILDISWSKNNRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDD 423

[Close]

BLAST of Carg05299 vs. TAIR10
Match: AT5G54200.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 5.0e-65
Identity = 158/446 (35.43%), Postives = 226/446 (50.67%), Query Frame = 0


Query: 6   RDTDVFFDSEDYLPLEDSL--VAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLLEFA 65
           R+  V F S++  P+E SL  + E+     +  E  M   +++   R+  + EV      
Sbjct: 165 RNDGVDFISKE--PMERSLRDIVEKENGRDVVLEEQMCTIRNLDTGREFVVNEV------ 224

Query: 66  SSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLLPVS 125
                  D ++E     G      L EF   V +S         +N  ++C + + L  +
Sbjct: 225 -----REDGMLERLKEVGTDRQLTLEEFEICVGTSPIVLELMRRQNVEDVCKDSVDLDTN 284

Query: 126 VSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAKSKT 185
           VS S   +                 R+   W +S KN A+S+  T + E   T    S +
Sbjct: 285 VSGSRVTK----------------HRRRGSWLKSIKNVASSV--TGYKERRSTDDRDSPS 344

Query: 186 ----------------------CRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSP 245
                                  R+KV Q  K C E +AL+  Q+I AHKG IW++KFS 
Sbjct: 345 ERGGQRFSSATDDSRDMSFHDPERVKVRQYGKSCKELTALFKSQEIQAHKGSIWSIKFSL 404

Query: 246 DGKYLASGGEDGVVRMWRISSANASTEFLA----NDGNYN--------------NKPREG 305
           DG+YLAS GED V+++W++  +    E L+     DG+ N              +  R G
Sbjct: 405 DGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLANGSPEPVSMSPKRRG 464

Query: 306 KSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRL 365
           ++SFS K +    V++PE VF + E+PV  F GH  DVLD++WS S  LLSSS DKTVRL
Sbjct: 465 RTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSKSQHLLSSSMDKTVRL 524

Query: 366 WGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVI 410
           W + S  CL VF H +YVTCIQFNP+D+NYFISGS+D K+R+WS+   +VVDW D+ +++
Sbjct: 525 WDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMV 579

[Close]

BLAST of Carg05299 vs. TAIR10
Match: AT5G42010.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 3.3e-61
Identity = 132/319 (41.38%), Postives = 178/319 (55.80%), Query Frame = 0


Query: 115 SNEMLLPVSVSNSGSRRCHGEADVEG---CRDIDVGKRKIKKWWRSFKNKAASLRSTEFS 174
           SN   +   +S S S R     D+      R  +  K+  K W +        L  TE  
Sbjct: 158 SNSSSIAEGLSESDSSRFDSYGDLPNSPMSRYEESPKKGAKGWLKKLGVLTHVLDKTEEC 217

Query: 175 EELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGE 234
            + ++  +  +    +V   KK+  E S+L + Q+  AH G I  MKFS DGKYLAS GE
Sbjct: 218 TDGESTRSSIRRQLTRVQSFKKQFKELSSLCVGQEFSAHDGSIVVMKFSHDGKYLASAGE 277

Query: 235 DGVVRMWRI-------------SSANASTEFLANDGNY------NNKPREGKSSFSSKPL 294
           D VVR+W I              S ++   F  ND +        N+  E       K  
Sbjct: 278 DCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRGLLRKKS 337

Query: 295 RFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVG-SDQC 354
                V+P KVF I E P  EF GH+ ++LD++WS    LLSSS D+TVRLW VG SD+C
Sbjct: 338 ESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDEC 397

Query: 355 LGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPD 411
           + VF HK++VTC+ FNP+D+NYFISGSIDGK+R+W V + RVVD+ D+R ++TAL Y+PD
Sbjct: 398 IRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPD 457

[Close]

BLAST of Carg05299 vs. TAIR10
Match: AT5G53500.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.8e-54
Identity = 156/460 (33.91%), Postives = 211/460 (45.87%), Query Frame = 0


Query: 2   LSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLLE 61
           LS + D   F  +E+ + L  S           G+++W   P S+  RR++FL+ +G+ E
Sbjct: 4   LSQEEDLQFFDANEEMMALNPS---------GFGFDVWNDSPGSVVERRRKFLEWMGVEE 63

Query: 62  FASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYA-------------------P 121
                       +E+ DS     +E    F G   +S  A                    
Sbjct: 64  EGR---------VETKDSVSGSSVESC--FDGGEENSVEAXXXXXXXXXXXXXXXXXXXX 123

Query: 122 TCNVEENDLELCSNEMLLPVS-------VSNSGSRRCHGEADVEGCRDIDVGKRKIKKWW 181
               EE  L +  N     V+        S S SR C  + + E  R+I       KK W
Sbjct: 124 XXXXEELSLRVDRNVGGCDVTRRQSSSMASCSSSRYCQVK-ETEKQRNIAGLVTSFKKGW 183

Query: 182 RSFKNKAASLRSTEFSEELKTIPAK---SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKG 241
            S          T      +   +        R+KV   KK+  E SALY  Q I AH G
Sbjct: 184 LSRLRSMGCTADTNIESGGRMRASSGYGDVISRVKVKHCKKQAKELSALYQSQDIKAHDG 243

Query: 242 LIWTMKFSPDGKYLASGGEDGVVRMWRISSANAS--------------TEFLANDGNY-- 301
            I  MKFS DGK+LAS GEDG+VR+W++     S                F  ND +   
Sbjct: 244 AILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRLRRDCLNEIDPSCMYFEVNDLSQLK 303

Query: 302 -----NNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNC 361
                  KP++   SF  K    A VV P KVF+I E+P+ EF GH+ +VLDI+WS  N 
Sbjct: 304 PVLVNEEKPKKTTESF-RKTSDSACVVFPPKVFRIMEKPLYEFRGHTGEVLDISWSKDNY 363

Query: 362 LLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQ 412
           LLS+S DKTVRLW VGS+ CLGVF H +YVT +QFNP+                      
Sbjct: 364 LLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVXXXXXXXXXXXXXXXXXXXXXC 423

[Close]

BLAST of Carg05299 vs. Swiss-Prot
Match: sp|O60136|YNS5_SCHPO (Uncharacterized WD repeat-containing protein C18H10.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC18H10.05 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.6e-39
Identity = 79/248 (31.85%), Postives = 131/248 (52.82%), Query Frame = 0


Query: 175 KTIPAKSKTCRMKVYQNK--------KRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYL 234
           K +P K  T   K+Y ++        K  + F    M+ +    K  +W  + S  GKYL
Sbjct: 142 KRMPKKEITLNQKLYVSQVIGPADAPKSKTIFGKRIMQWEPSQFKESVWASEISKSGKYL 201

Query: 235 ASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQI 294
           A+ G+D ++R+W++       E L  +G                P        P  +F  
Sbjct: 202 ATAGKDAIIRVWKVIETPERRETLLKEG----------------PQSCGRFFTPSSIF-- 261

Query: 295 DEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQF 354
           + +PV E  GH+++VL I+WS ++ LL+SS D+TVRLW   S + L VF H   VTC+ F
Sbjct: 262 EPEPVLECVGHNAEVLSISWSKNDFLLTSSADRTVRLWHPKSTKSLAVFRHNEIVTCVAF 321

Query: 355 NPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRF 414
           +P+D+ YF+SGS+D KI++WS+L+ +++ W ++  V++ + + PDG+   +G   G C  
Sbjct: 322 HPIDDRYFVSGSLDCKIQLWSILRHKILHWTELEYVVSTICFYPDGESIVVGMFYGLCAI 371

[Close]

BLAST of Carg05299 vs. Swiss-Prot
Match: sp|Q9XSC3|WDR44_BOVIN (WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.7e-33
Identity = 82/214 (38.32%), Postives = 117/214 (54.67%), Query Frame = 0


Query: 210 HKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNK----PREGKS 269
           H G +WTMKFS  G+ LAS G+D VVR+W +   NA   F      YN +    P   + 
Sbjct: 509 HMGAVWTMKFSHCGRLLASAGQDNVVRIWALK--NAFDYFNNMRMKYNTEGRVSPSPSQE 568

Query: 270 SFSSKPLRFATVVI-------PEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKD 329
           S +S      T V         +K     ++P  ++ GH++D+LD++WS +  LLSSS D
Sbjct: 569 SLNSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSSSMD 628

Query: 330 KTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWAD 389
           KTVRLW +   +CL  F H ++VT I F+P D+ YF+SGS+DGK+       ++V  W +
Sbjct: 629 KTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLXXXXXPDKKVALWNE 688

Query: 390 V---RDVITALAYQPDGKGFAIGSITGTCRFYKT 410
           V     +ITA  +  +GK   IG+  G C FY T
Sbjct: 689 VDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDT 720

[Close]

BLAST of Carg05299 vs. Swiss-Prot
Match: sp|Q6NVE8|WDR44_MOUSE (WD repeat-containing protein 44 OS=Mus musculus OX=10090 GN=Wdr44 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-32
Identity = 81/214 (37.85%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 210 HKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNK----PREGKS 269
           H G +WTMKFS  G+ LAS G+D +VR+W +   NA   F      YN +    P   + 
Sbjct: 512 HMGAVWTMKFSHCGRLLASAGQDNIVRIWALK--NAFDYFNNMRMKYNTEGRVSPSPSQE 571

Query: 270 SFSSKPLRFATVVI-------PEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKD 329
           S SS        V         +K     ++P  ++ GH++D+LD++WS +  LLSSS D
Sbjct: 572 SLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSSSMD 631

Query: 330 KTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWAD 389
           KTVRLW +   +CL  F H ++VT I F+P D+ YF+SGS+DGK+       ++V  W +
Sbjct: 632 KTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLXXXXXPDKKVALWNE 691

Query: 390 V---RDVITALAYQPDGKGFAIGSITGTCRFYKT 410
           V     +ITA  +  +GK   IG+  G C FY T
Sbjct: 692 VDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDT 723

[Close]

BLAST of Carg05299 vs. Swiss-Prot
Match: sp|Q9R037|WDR44_RAT (WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-32
Identity = 81/214 (37.85%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 210 HKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNK----PREGKS 269
           H G +WTMKFS  G+ LAS G+D +VR+W +   NA   F      YN +    P   + 
Sbjct: 505 HMGAVWTMKFSHCGRLLASAGQDNIVRIWALK--NAFDYFNNMRMKYNTEGRVSPSPSQE 564

Query: 270 SFSSKPLRFATVVI-------PEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKD 329
           S SS        V         +K     ++P  ++ GH++D+LD++WS +  LLSSS D
Sbjct: 565 SLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSSSMD 624

Query: 330 KTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWAD 389
           KTVRLW +   +CL  F H ++VT I F+P D+ YF+SGS+DGK+       ++V  W +
Sbjct: 625 KTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLXXXXXPDKKVALWNE 684

Query: 390 V---RDVITALAYQPDGKGFAIGSITGTCRFYKT 410
           V     +ITA  +  +GK   IG+  G C FY T
Sbjct: 685 VDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDT 716

[Close]

BLAST of Carg05299 vs. Swiss-Prot
Match: sp|Q498F0|WDR44_XENLA (WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.4e-32
Identity = 78/213 (36.62%), Postives = 114/213 (53.52%), Query Frame = 0


Query: 210 HKGLIWTMKFSPDGKYLASGGEDGVVRMWRISSA---------NASTEFLANDGNYNNKP 269
           H G +WTMKFS  G+ LAS G+D VVR+W + +A           +TE   +        
Sbjct: 512 HVGAVWTMKFSHCGRLLASAGQDNVVRIWVLKNAFDYFNNMRIKYNTEGRVSPSPSQESL 571

Query: 270 REGKSSFSSKPLRFATVVIP-EKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDK 329
              KS            V P +K     + P  ++ GH++D+LD++WS +  LLSSS DK
Sbjct: 572 NSSKSDTDGGVFSGTDDVDPDDKNAPFRQVPFCKYKGHTADLLDLSWSKNYFLLSSSMDK 631

Query: 330 TVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADV 389
           TVRLW +   +CL  F H ++VT I F+P D+ YF+SGS+DGK+    +  ++V  W ++
Sbjct: 632 TVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLXXXXIPDKKVALWNEI 691

Query: 390 ---RDVITALAYQPDGKGFAIGSITGTCRFYKT 410
                +ITA  +  +GK   IG+  G C FY T
Sbjct: 692 DGQTKLITAANFCQNGKHAVIGTYDGRCIFYDT 724

[Close]

BLAST of Carg05299 vs. TrEMBL
Match: tr|A0A0A0KF80|A0A0A0KF80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483500 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.1e-158
Identity = 291/421 (69.12%), Postives = 319/421 (75.77%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSD D DVFFDSEDYLPLE+SLVAEE   +KLGYEIWMSEPQSIK+RR+RFLQEVG +
Sbjct: 1   MLSSDGDADVFFDSEDYLPLEESLVAEEADFSKLGYEIWMSEPQSIKKRRERFLQEVGFV 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL 120
           +FASS TCA D  IESS SS RMELERLTE SGAVSSSDY P+CNVEENDL +C NEM  
Sbjct: 61  DFASSSTCAQDSEIESSCSSERMELERLTECSGAVSSSDYTPSCNVEENDLVVCHNEMQS 120

Query: 121 P----------VSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEF 180
                       SVS+S  RR  GEA+VE C+D DVGKRKI  WW+SFKNKAA  RS +F
Sbjct: 121 AEFDNEATSRLSSVSDSSFRRPQGEANVEACQDADVGKRKILTWWKSFKNKAARRRSADF 180

Query: 181 SEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGG 240
           S E +    KS++CRMKVYQ+KKRCSEFSALYMRQQI AHKGLIWTMKFSPDGKYLASGG
Sbjct: 181 SRESELNSPKSQSCRMKVYQHKKRCSEFSALYMRQQICAHKGLIWTMKFSPDGKYLASGG 240

Query: 241 EDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQP 300
           EDGVVR+WR++ ANAS+EFLA+DGNYN KP+EGKSSFSSKPLRFATVVIPEKVFQIDE P
Sbjct: 241 EDGVVRIWRVTYANASSEFLADDGNYNTKPKEGKSSFSSKPLRFATVVIPEKVFQIDELP 300

Query: 301 VQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMD 360
           +QE +GHSSD+LDIAWS SNCLLSSSKDKTVRLW V SDQCL VFHHKNYVTC+QFNPMD
Sbjct: 301 IQELHGHSSDILDIAWSTSNCLLSSSKDKTVRLWQVSSDQCLNVFHHKNYVTCVQFNPMD 360

Query: 361 ENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTS 412
           E                                              GSITGTCRFY+TS
Sbjct: 361 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSITGTCRFYETS 420

[Close]

BLAST of Carg05299 vs. TrEMBL
Match: tr|A0A1S3B389|A0A1S3B389_CUCME (WD repeat-containing protein 44 OS=Cucumis melo OX=3656 GN=LOC103485263 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.4e-149
Identity = 283/423 (66.90%), Postives = 314/423 (74.23%), Query Frame = 0


Query: 1   MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL 60
           MLSSD D DVFFDSEDYLPLE++LVAEE   +KLGYEIWMSEPQSIK+RR+RFLQEVG +
Sbjct: 1   MLSSDGDADVFFDSEDYLPLEEALVAEEADFSKLGYEIWMSEPQSIKKRRERFLQEVGFV 60

Query: 61  EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEM-- 120
           EFASS TCA D  IESS SS RMELERLTE SGAVSSSDY P+CNVE NDL +C NEM  
Sbjct: 61  EFASSSTCAQDSEIESSCSSERMELERLTECSGAVSSSDYTPSCNVEGNDLVVCHNEMQS 120

Query: 121 ----------LLPVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRST 180
                     L P   S+S  +R  GEA+VE C+D+DVGK+KI  WW+SFKNKAA  RS 
Sbjct: 121 AEFDNEATNRLSP--ASDSSFQRPQGEANVEACQDVDVGKKKILAWWKSFKNKAARRRSI 180

Query: 181 EFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLAS 240
           +FS E +    K ++CRMKVYQ+KKRCSEFSALYMRQQI AHKGLIWTMKFSPDGKYLAS
Sbjct: 181 DFSGESELNSPKFQSCRMKVYQHKKRCSEFSALYMRQQIGAHKGLIWTMKFSPDGKYLAS 240

Query: 241 GGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDE 300
           GGEDGVVR+W +  ANAS+EFLA+DGNYN K ++GKS  SSK LRFATVVIPEK+FQIDE
Sbjct: 241 GGEDGVVRIWHVRYANASSEFLADDGNYNTKSKDGKS--SSKRLRFATVVIPEKLFQIDE 300

Query: 301 QPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNP 360
            P+QEF GHSSDVLDIAWS SN LLSSSKDKTV LW VGSD+CLGVFHHKNYVTCIQFNP
Sbjct: 301 LPIQEFRGHSSDVLDIAWSTSNFLLSSSKDKTVCLWQVGSDECLGVFHHKNYVTCIQFNP 360

Query: 361 MDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYK 412
           MDE                                           FA+GSITGTCRFY+
Sbjct: 361 MDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAVGSITGTCRFYE 419

[Close]

BLAST of Carg05299 vs. TrEMBL
Match: tr|A0A2P4HIG6|A0A2P4HIG6_QUESU (Isoform 2 of wd repeat-containing protein 44 OS=Quercus suber OX=58331 GN=CFP56_63315 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 233/439 (53.08%), Postives = 292/439 (66.51%), Query Frame = 0


Query: 1   MLSSDR-DTDVFFDSEDYLPLEDSLVA-EEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVG 60
           MLSSD  + DVFFDS D+L  E S+V  EE+ S  L Y IWM EP S+K RR+ FL  +G
Sbjct: 1   MLSSDEGEFDVFFDSVDHLSSEGSIVGKEELDSVNLEYGIWMKEPLSVKDRRESFLHGMG 60

Query: 61  LLEFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNE- 120
           L EF ++R C  +  ++    S  M L+RLTE SGAVSSS  + + +  E  L  C NE 
Sbjct: 61  LAEFGAARICGEENEMDIGGLSEMMGLDRLTECSGAVSSSSIS-SIDCAEEKLVCCRNER 120

Query: 121 -----MLLPV-----------------SVSNSGSRRCHGE---ADVEGCRDIDVGKRKIK 180
                 +L V                 ++ ++ +R+C      A+V+    +DVGKRK K
Sbjct: 121 GNEANAMLDVLEGKEEDEQKVILNGEDTLLSTSARKCVENDTLANVQAYNMLDVGKRKFK 180

Query: 181 KWWRSFKNKAASLRSTEFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKG 240
            W +   NK      T  +E  KT     K  R KV+QNKKR  E +ALY  Q+I AH+G
Sbjct: 181 SWLKHLVNKRKGRGDTFVTEVSKTNYETPKIKRAKVWQNKKRYMELTALYNGQEICAHRG 240

Query: 241 LIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPL 300
           LIWTMKFSPDG+YLASGGEDG+VR+WR++SA AS   L  +GN + K + GK +F  K  
Sbjct: 241 LIWTMKFSPDGQYLASGGEDGIVRIWRVTSAEASYNDLIIEGNSSIKVKGGKFTFGGKKT 300

Query: 301 RFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCL 360
             A++VIP+KVF I E P+QEF+GHSSDVLD++WSNSNCLLSSSKDKTVRLW VG ++CL
Sbjct: 301 SHASIVIPDKVFHIKESPLQEFHGHSSDVLDLSWSNSNCLLSSSKDKTVRLWQVGCNKCL 360

Query: 361 GVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDG 412
            VFHH +YVTC+QFNP+D+NYF+SGSIDGK R+W V ++RVVDW DVRDVITAL YQPDG
Sbjct: 361 NVFHHNDYVTCVQFNPIDDNYFVSGSIDGKFRIWGVSEKRVVDWDDVRDVITALCYQPDG 420

[Close]

BLAST of Carg05299 vs. TrEMBL
Match: tr|A0A2P4HIB0|A0A2P4HIB0_QUESU (Isoform 2 of wd repeat-containing protein 44 OS=Quercus suber OX=58331 GN=CFP56_63315 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 233/440 (52.95%), Postives = 292/440 (66.36%), Query Frame = 0


Query: 1   MLSSDR-DTDVFFDSEDYLPLEDSLVA-EEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVG 60
           MLSSD  + DVFFDS D+L  E S+V  EE+ S  L Y IWM EP S+K RR+ FL  +G
Sbjct: 1   MLSSDEGEFDVFFDSVDHLSSEGSIVGKEELDSVNLEYGIWMKEPLSVKDRRESFLHGMG 60

Query: 61  LLEFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNE- 120
           L EF ++R C  +  ++    S  M L+RLTE SGAVSSS  + + +  E  L  C NE 
Sbjct: 61  LAEFGAARICGEENEMDIGGLSEMMGLDRLTECSGAVSSSSIS-SIDCAEEKLVCCRNER 120

Query: 121 -----MLLPV-----------------SVSNSGSRRCHGE---ADVEGCRDIDVGKRKIK 180
                 +L V                 ++ ++ +R+C      A+V+    +DVGKRK K
Sbjct: 121 GNEANAMLDVLEGKEEDEQKVILNGEDTLLSTSARKCVENDTLANVQAYNMLDVGKRKFK 180

Query: 181 KWWRSFKNKAASLRSTEFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKG 240
            W +   NK      T  +E  KT     K  R KV+QNKKR  E +ALY  Q+I AH+G
Sbjct: 181 SWLKHLVNKRKGRGDTFVTEVSKTNYETPKIKRAKVWQNKKRYMELTALYNGQEICAHRG 240

Query: 241 LIWTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPL 300
           LIWTMKFSPDG+YLASGGEDG+VR+WR++SA AS   L  +GN + K + GK +F  K  
Sbjct: 241 LIWTMKFSPDGQYLASGGEDGIVRIWRVTSAEASYNDLIIEGNSSIKVKGGKFTFGGKKT 300

Query: 301 RFATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSN-CLLSSSKDKTVRLWGVGSDQC 360
             A++VIP+KVF I E P+QEF+GHSSDVLD++WSNSN CLLSSSKDKTVRLW VG ++C
Sbjct: 301 SHASIVIPDKVFHIKESPLQEFHGHSSDVLDLSWSNSNQCLLSSSKDKTVRLWQVGCNKC 360

Query: 361 LGVFHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPD 412
           L VFHH +YVTC+QFNP+D+NYF+SGSIDGK R+W V ++RVVDW DVRDVITAL YQPD
Sbjct: 361 LNVFHHNDYVTCVQFNPIDDNYFVSGSIDGKFRIWGVSEKRVVDWDDVRDVITALCYQPD 420

[Close]

BLAST of Carg05299 vs. TrEMBL
Match: tr|A0A067JQF7|A0A067JQF7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22233 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-116
Identity = 224/436 (51.38%), Postives = 294/436 (67.43%), Query Frame = 0


Query: 1   MLSSDRDTD-VFFDSEDYLPLEDSLVAEE--VGSNKLGYEIWMSEPQSIKRRRQRFLQEV 60
           ML+SD+  D +FFDS D LPLE+S+V +E  +  + L Y+IW++EPQS+K RR+ F  E+
Sbjct: 1   MLNSDKGEDELFFDSADCLPLEESIVTKEENLRFDNLEYQIWLNEPQSVKERRKNFFCEM 60

Query: 61  GLLEFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELC--- 120
           G+ + AS            S+ +  + LER+++ SGAVSSS    T   EE +L  C   
Sbjct: 61  GMADLAS-----------KSNDNEIIGLERISKSSGAVSSSPVLCT-YAEERNLVFCGRE 120

Query: 121 ----SNEML------------LPVSVSNSG----SRRCHGEADVEGCRDIDVGKRKIKKW 180
               +N M+            L     NSG    + +C  ++D E C+  D GK K+K+W
Sbjct: 121 TNCEANSMIDEMEENLFDKPNLTFENENSGFLPSAIKCE-DSDAEECKSFDGGKEKMKRW 180

Query: 181 WRSFKNKAASLRSTEFSEELKTIPAKSKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLI 240
           W+ F +K      T  S   K+ P  +KT R+ V QNKKRC E + ++M Q+I AHKG I
Sbjct: 181 WKFFVHKRRQREVTCLSTGSKSNPEATKTNRVIVKQNKKRCMELTGVFMGQKIQAHKGFI 240

Query: 241 WTMKFSPDGKYLASGGEDGVVRMWRISSANASTEFLANDGNYNNKPREGKSSFSSKPLRF 300
           W MKFSPDG+YLA+GGEDG+VR+WR+++ +AS +  A + N     +EGK SFSSK +  
Sbjct: 241 WAMKFSPDGQYLATGGEDGIVRIWRVTTVDASCKSFAYERNIGCNLKEGKPSFSSKKVSH 300

Query: 301 ATVVIPEKVFQIDEQPVQEFYGHSSDVLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGV 360
           A+VVIPEK+FQI++ PV EFYGH+ DVLD+AWS+SNCLLSSSKDKTVRLW VGS+ CL V
Sbjct: 301 ASVVIPEKIFQIEDSPVHEFYGHARDVLDLAWSSSNCLLSSSKDKTVRLWQVGSNHCLNV 360

Query: 361 FHHKNYVTCIQFNPMDENYFISGSIDGKIRVWSVLKQRVVDWADVRDVITALAYQPDGKG 411
           FHH NYVTCIQFNP DE +FISGSIDGK+R+W V + RVV+W D RDV +A+ YQPDGKG
Sbjct: 361 FHHTNYVTCIQFNPTDETHFISGSIDGKVRIWGVFEGRVVNWVDARDVTSAICYQPDGKG 420

The following BLAST results are available for this feature:

BLAST of Carg05299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962704.1	2.4e-238	99.76	lissencephaly-1 homolog [Cucurbita moschata] >XP_022962705.1 lissencephaly-1 hom...	[more]
XP_023003066.1	3.9e-233	97.57	WD repeat-containing protein YMR102C-like [Cucurbita maxima]	[more]
XP_023518000.1	1.5e-232	98.05	lissencephaly-1 homolog [Cucurbita pepo subsp. pepo] >XP_023518001.1 lissencepha...	[more]
XP_022950097.1	1.3e-159	68.35	WD repeat-containing protein 44-like isoform X2 [Cucurbita moschata]	[more]
XP_004148673.1	3.1e-158	69.12	PREDICTED: WD repeat-containing protein 44 [Cucumis sativus] >XP_011657764.1 PRE...	[more]

BLAST of Carg05299 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48870.1	1.4e-80	41.65	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24320.2	9.0e-67	34.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G54200.1	5.0e-65	35.43	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G42010.1	3.3e-61	41.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G53500.1	1.8e-54	33.91	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Carg05299 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O60136\|YNS5_SCHPO	7.6e-39	31.85	Uncharacterized WD repeat-containing protein C18H10.05 OS=Schizosaccharomyces po...	[more]
sp\|Q9XSC3\|WDR44_BOVIN	3.7e-33	38.32	WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1	[more]
sp\|Q6NVE8\|WDR44_MOUSE	1.1e-32	37.85	WD repeat-containing protein 44 OS=Mus musculus OX=10090 GN=Wdr44 PE=1 SV=1	[more]
sp\|Q9R037\|WDR44_RAT	1.1e-32	37.85	WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1	[more]
sp\|Q498F0\|WDR44_XENLA	2.4e-32	36.62	WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1	[more]

BLAST of Carg05299 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KF80\|A0A0A0KF80_CUCSA	2.1e-158	69.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483500 PE=4 SV=1	[more]
tr\|A0A1S3B389\|A0A1S3B389_CUCME	1.4e-149	66.90	WD repeat-containing protein 44 OS=Cucumis melo OX=3656 GN=LOC103485263 PE=4 SV=...	[more]
tr\|A0A2P4HIG6\|A0A2P4HIG6_QUESU	1.0e-117	53.08	Isoform 2 of wd repeat-containing protein 44 OS=Quercus suber OX=58331 GN=CFP56_...	[more]
tr\|A0A2P4HIB0\|A0A2P4HIB0_QUESU	2.6e-116	52.95	Isoform 2 of wd repeat-containing protein 44 OS=Quercus suber OX=58331 GN=CFP56_...	[more]
tr\|A0A067JQF7\|A0A067JQF7_JATCU	7.5e-116	51.38	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22233 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat
IPR020472	G-protein_beta_WD-40_rep

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05299-RA	Carg05299-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 226..240 score: 34.06 coord: 354..368 score: 35.61 coord: 312..326 score: 39.29
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 369..408 e-value: 1.1 score: 16.8 coord: 287..325 e-value: 1.7E-8 score: 44.2 coord: 328..367 e-value: 1.9E-10 score: 50.7 coord: 200..239 e-value: 1.4E-7 score: 41.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 289..324 e-value: 3.8E-7 score: 30.6 coord: 208..238 e-value: 2.9E-7 score: 31.0 coord: 330..367 e-value: 6.3E-5 score: 23.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 334..368 score: 12.38
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 207..248 score: 15.755
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 294..334 score: 12.346
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 118..275 e-value: 4.2E-13 score: 50.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 276..419 e-value: 2.6E-32 score: 113.9
None	No IPR available	PANTHER	PTHR14221	WD REPEAT DOMAIN 44	coord: 3..413
None	No IPR available	PANTHER	PTHR14221:SF8	SUBFAMILY NOT NAMED	coord: 3..413
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 207..376 score: 17.719
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 288..410 coord: 201..242

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05299	Cla008447	Watermelon (97103) v1	carwmB0803
Carg05299	Csa6G483500	Cucumber (Chinese Long) v2	carcuB0826
Carg05299	MELO3C008041	Melon (DHL92) v3.5.1	carmeB0806
Carg05299	ClCG01G015550	Watermelon (Charleston Gray)	carwcgB0778
Carg05299	CSPI06G26610	Wild cucumber (PI 183967)	carcpiB0846
Carg05299	Cucsa.101070	Cucumber (Gy14) v1	carcgyB0918
Carg05299	CmaCh03G010850	Cucurbita maxima (Rimu)	carcmaB1125
Carg05299	CmaCh07G007910	Cucurbita maxima (Rimu)	carcmaB1130
Carg05299	CmoCh03G010720	Cucurbita moschata (Rifu)	carcmoB1095
Carg05299	CmoCh07G008140	Cucurbita moschata (Rifu)	carcmoB1100
Carg05299	Lsi01G011380	Bottle gourd (USVL1VR-Ls)	carlsiB742
Carg05299	CsGy6G026050	Cucumber (Gy14) v2	carcgybB0799
Carg05299	MELO3C008041.2	Melon (DHL92) v3.6.1	carmedB0817
Carg05299	CsaV3_6G041790	Cucumber (Chinese Long) v3	carcucB0849
Carg05299	Cla97C01G014500	Watermelon (97103) v2	carwmbB0839
Carg05299	Bhi03G001058	Wax gourd	carwgoB0947

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05299	Carg10546	Silver-seed gourd	carcarB280

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05299	Cucurbita pepo (Zucchini)	carcpeB1128
Carg05299	Cucurbita pepo (Zucchini)	carcpeB1135