Carg05245 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05245
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cold-regulated protein
Location	Cucurbita_argyrosperma_scaffold_010 : 692510 .. 694363 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGAAAACCAATCTGATCCGAAACTTCCAACCATTTTGGAGTCTCTAACTCTGCTGAAAACAAGGAGATTGACCGCTTTACATTTTCCCATCACCCAGTTCCTTCGAAACTATAAGTATGCATCCAAGGTGTTTGAATAAATGCTTCACCGACTCTCACACTTTGAATACTCTTCTTCACTTCCCTGTAACATTTTCTCAAGCCAAATGGGGAGGATGCCATATTTGGCTCTCAATAGTGATCCGCTGATTGATGAGATTTTAAATTCTGATTTCAATGAGCTTAAAATTGCAGCCACCAGGCTTATTCATCATGCCGCCAAGCTCGGTGGAAAGGGCCTTGGGACTTCTTTTTTCAAATGGCTTGCCTCTTTTGCTGCCATGTGAGTGCTTTCTAATGCAATGGAGGCCAAAAAATGGGTCCCTTTTGGATTATTTATGGACTCTGCTTGTTCTTGGTTCTAAAGTTCATGTTTTTTTTTTTATTACATCACCGTGCAGTTACTTGTTGATTTTGGACCGCACAAACTGGAGAACAAACATGCTTACTTCGCTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTGAAGGAATTTTCGACTTAGTGAGGTGACAGTCACGCTCGTTTCTTCTTATTTTTATTGCTTTAGCTGATGGCTTTCAAATGTTAACGATATGGTTTTCTTCTTGATTTTGTTAAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTCCCACGACATTTCCCAGGTAATAAGCATGGTGTCCTCTGTTTAGTTTTCCACAACATATTGTTCAGTAACCTGCTGTTTTGTATGATAAAAGCATTGCTTTTGGATTTGTGACATCCCGTAGGAAAGGGGGAACAAAGCCTTCCTTATAAGGGTATGGAAATTTCTTCACGCGTGTTAAAACTTTAGGGGAAGCCGACCAGAGAATATCTAACAATATATCTAACAATATCTTCTAGCAGTGAGCTTGGTGTGCCAGCAAGGACGATTGCCCCTAGGGGGTGAATTGTGAGATCTCATATGGTCGGTGTGCCAGCATGGACGATGGCCCCTAAAGGGTGAATTGTGAGATCTCATATTTGTTGGAGAGGGGAACAAAGTATTACTAGTGTAGAAACCTCTCCGAACAGACATGTTTTAAAACTTTGAGTGGAAACTAGAAGAGAGTCAAAAGAGGATCATATCTCTTGGGCTTGAACGGAGAGTCAGACATCGGGCGGTATGCCAGCGAGCATGTTGTGCATGGAAATCTCTCTGACAGATGGAGATCTCTCTGACAGATGACTAATTTTAAAACTTTGAGTGAAGCCTGAATCATATCTCTCCTTGAATAATTTAACTTTGAGTGAAACCTTGTATGATGCCTGGAATAATAAGTTAACTACAAAAAGGCATTCATTCGTTCCTCATCACTATTAGATTCAAACTTGTAATCGTTGATGTTGAACTCATGGTTAGGAGTAGTGGAAGTGAGATTGTAAAAGCTGAAAACATTGAGAGAGCATGTTGATGTGCAGATTGGCTAGAGATTCCAGGGTCGTTGATTCTGCTTCTGGTGGCAGCACCAGGGTTCTTTGTACACTCATTGAGAGACCACTTGGCTGGCGTCGTGATATGTTTGATCATTGGATGTTACCTTCTGCAAGAGCACATTCGCGCATCAGGTGGCTTCAGAAACTCTCTTACTCAAAGCCATGGCATTTCCAACACCCTCGGCATCGTCCTCCTCCTTGTCTTCCCTGTTTGGGCCATGCTTGCTCGCTTCTTCTAGCTCTAAATCCCACACGTTTGCTTCTCACTTCTTCATCAACCAAAAATTTT

mRNA sequence

GCCGAAAACCAATCTGATCCGAAACTTCCAACCATTTTGGAGTCTCTAACTCTGCTGAAAACAAGGAGATTGACCGCTTTACATTTTCCCATCACCCAGTTCCTTCGAAACTATAAGTATGCATCCAAGGTGTTTGAATAAATGCTTCACCGACTCTCACACTTTGAATACTCTTCTTCACTTCCCTGTAACATTTTCTCAAGCCAAATGGGGAGGATGCCATATTTGGCTCTCAATAGTGATCCGCTGATTGATGAGATTTTAAATTCTGATTTCAATGAGCTTAAAATTGCAGCCACCAGGCTTATTCATCATGCCGCCAAGCTCGGTGGAAAGGGCCTTGGGACTTCTTTTTTCAAATGGCTTGCCTCTTTTGCTGCCATTTACTTGTTGATTTTGGACCGCACAAACTGGAGAACAAACATGCTTACTTCGCTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTGAAGGAATTTTCGACTTAGTGAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTCCCACGACATTTCCCAGATTGGCTAGAGATTCCAGGGTCGTTGATTCTGCTTCTGGTGGCAGCACCAGGGTTCTTTGTACACTCATTGAGAGACCACTTGGCTGGCGTCGTGATATGTTTGATCATTGGATGTTACCTTCTGCAAGAGCACATTCGCGCATCAGGTGGCTTCAGAAACTCTCTTACTCAAAGCCATGGCATTTCCAACACCCTCGGCATCGTCCTCCTCCTTGTCTTCCCTGTTTGGGCCATGCTTGCTCGCTTCTTCTAGCTCTAAATCCCACACGTTTGCTTCTCACTTCTTCATCAACCAAAAATTTT

Coding sequence (CDS)

ATGCTTCACCGACTCTCACACTTTGAATACTCTTCTTCACTTCCCTGTAACATTTTCTCAAGCCAAATGGGGAGGATGCCATATTTGGCTCTCAATAGTGATCCGCTGATTGATGAGATTTTAAATTCTGATTTCAATGAGCTTAAAATTGCAGCCACCAGGCTTATTCATCATGCCGCCAAGCTCGGTGGAAAGGGCCTTGGGACTTCTTTTTTCAAATGGCTTGCCTCTTTTGCTGCCATTTACTTGTTGATTTTGGACCGCACAAACTGGAGAACAAACATGCTTACTTCGCTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTGAAGGAATTTTCGACTTAGTGAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTCCCACGACATTTCCCAGATTGGCTAGAGATTCCAGGGTCGTTGATTCTGCTTCTGGTGGCAGCACCAGGGTTCTTTGTACACTCATTGAGAGACCACTTGGCTGGCGTCGTGATATGTTTGATCATTGGATGTTACCTTCTGCAAGAGCACATTCGCGCATCAGGTGGCTTCAGAAACTCTCTTACTCAAAGCCATGGCATTTCCAACACCCTCGGCATCGTCCTCCTCCTTGTCTTCCCTGTTTGGGCCATGCTTGCTCGCTTCTTCTAG

Protein sequence

MLHRLSHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF

Homology

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BLAST of Carg05245 vs. NCBI nr
Match: XP_022962765.1 (cold-regulated 413 plasma membrane protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 452.6 bits (1163), Expect = 7.8e-124
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLHRLSHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAA 60
           MLHRLSHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHH A
Sbjct: 1   MLHRLSHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHTA 60

Query: 61  KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDA 120
           KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDA
Sbjct: 61  KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDA 120

Query: 121 GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY 180
           GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY
Sbjct: 121 GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY 180

Query: 181 LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 225
           LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF
Sbjct: 181 LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 224

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BLAST of Carg05245 vs. NCBI nr
Match: XP_023002994.1 (cold-regulated 413 plasma membrane protein 2 [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 5.1e-123
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MLHRLSHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAA 60
           M+HRL HFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAA
Sbjct: 1   MIHRLLHFEYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAA 60

Query: 61  KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDA 120
           KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLP+GIFDLVRGDA
Sbjct: 61  KLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLVRGDA 120

Query: 121 GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY 180
           GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY
Sbjct: 121 GKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCY 180

Query: 181 LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 225
           LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF
Sbjct: 181 LLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 224

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BLAST of Carg05245 vs. NCBI nr
Match: XP_023517082.1 (cold-regulated 413 plasma membrane protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 9.9e-119
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 9   EYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLG 68
           +YSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLG
Sbjct: 8   KYSSSLPCNIFSSQMGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLG 67

Query: 69  TSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVA 128
           TSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVA
Sbjct: 68  TSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVA 127

Query: 129 VVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRA 188
           VVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRA
Sbjct: 128 VVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRA 187

Query: 189 SGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 225
           SGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF
Sbjct: 188 SGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLARFF 223

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BLAST of Carg05245 vs. NCBI nr
Match: XP_004142025.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] >XP_011657813.1 PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] >KGN48465.1 hypothetical protein Csa_6G488350 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 2.4e-101
Identity = 181/202 (89.60%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGRM YLALNSDPL++E++NSD +ELKIAATRL+ HA KLGGKGLGTSFFKWLASFAAIY
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNWRTNMLTSLLVPYIFFSLP+GIF+L+RGDAGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIPGSLILLLVA PGFF H+LRDH AGVVICLIIGCYLLQEHIRASGGFRNSLTQ+HGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGCYLLQEHIRASGGFRNSLTQTHGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GI+LLLVFPVWAM+ARFF
Sbjct: 181 SNTIGIILLLVFPVWAMVARFF 202

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BLAST of Carg05245 vs. NCBI nr
Match: XP_022133246.1 (cold-regulated 413 plasma membrane protein 2-like [Momordica charantia])

HSP 1 Score: 377.9 bits (969), Expect = 2.4e-101
Identity = 181/202 (89.60%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGRMPYLALNSDPL++E +NSD NELKIAATRL+ HA KLGGKGLGTSFFKWLASFAAIY
Sbjct: 1   MGRMPYLALNSDPLMEESINSDINELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNWRTNMLTSLLVPYIFFSLP+GIFDL+R DAGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFDLLREDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIPGSLILL+VAAPGFF H+L+DH AGVVICL+IGCYLLQEHIRASGGFRNSLTQSHGI
Sbjct: 121 LEIPGSLILLVVAAPGFFAHTLKDHWAGVVICLVIGCYLLQEHIRASGGFRNSLTQSHGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GI+LL VFPVWAMLA FF
Sbjct: 181 SNTIGIILLFVFPVWAMLAHFF 202

[Close]

BLAST of Carg05245 vs. TAIR10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2)

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-76
Identity = 138/201 (68.66%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 23  MGRMPYLALNSDPL-IDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAI 82
           MGRM YLA+ +D +    ++NSD  ELK+AA +L    +KLGG G G SF K+LASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 83  YLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPD 142
           YLLILDRTNW+T MLTSLL+PYIF SLP  IF+ + GD GKWIAFVAVVLRLFFP+HFPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 143 WLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHG 202
           WLE+PGSLILLLV +P F  H +R    G VI L IGCYLLQEHIRASGGFRNS TQ  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 203 ISNTLGIVLLLVFPVWAMLAR 223
           +SNTLGI+LLLV+PVWA++ R
Sbjct: 181 VSNTLGIILLLVYPVWALIVR 201

[Close]

BLAST of Carg05245 vs. TAIR10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1)

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-65
Identity = 120/196 (61.22%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 26  MPYLALNSD-PLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIYLL 85
           MP  +L +D   +  ++ SDFNEL IAA  L  HA  L G G GTS  +W+AS AAIYLL
Sbjct: 1   MPMKSLRNDHGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLL 60

Query: 86  ILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDWLE 145
           +LDRTNW+TNMLTSLL+PYIFFSLP  IF + RG+ GKWIAFVAVV++LFFP+H  ++LE
Sbjct: 61  VLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLE 120

Query: 146 IPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGISN 205
           +P +L+LL V AP     + RD   G+ ICL IGCYLLQEHIRASGGFRN+ T+++GISN
Sbjct: 121 LPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISN 180

Query: 206 TLGIVLLLVFPVWAML 221
           T+GI+ L+VFPVWA++
Sbjct: 181 TVGIICLVVFPVWALI 196

[Close]

BLAST of Carg05245 vs. TAIR10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 245.0 bits (624), Expect = 4.5e-65
Identity = 114/202 (56.44%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGR  +LA+ ++     ++NSD NE   AA +L+     LGG G GTS  +W AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNW+T MLT+LLVPYIFF+LP  IF    GD GKWIA +A+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIP +LIL++V +P     +LR+   G VICL+I CYL  EHI+ASGGF+NS TQ +GI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GIV LLV+PVW +    F
Sbjct: 181 SNTIGIVALLVYPVWTIFFHIF 202

[Close]

BLAST of Carg05245 vs. TAIR10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35
Identity = 77/183 (42.08%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 46  NELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIYLLILDRTNWR--TNMLTSLLVPY 105
           NE++  A +LIH     G   + T F +WLAS  A++L+ILD+T W+   N++ SLL PY
Sbjct: 8   NEIQAVAGKLIH---SYGVPVMITLFLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPY 67

Query: 106 IFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHS 165
           +F SLP  IF ++R   GKWIA + V+LRLF P HF + LEIPG+ ILL+V  P      
Sbjct: 68  LFSSLPIVIFQVLRNGVGKWIALLTVILRLFLPNHFHESLEIPGATILLIVVTPSDIGAI 127

Query: 166 LRDHL--AGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLA 225
            RD L   G  +CL+   YL+ +H +A GG +NS TQ   ++ ++ + +L V+P+ +  A
Sbjct: 128 FRDDLRYTGGDVCLLTSFYLINKHTKACGGIKNSFTQKDKVTYSICLWILFVYPILSSFA 187

[Close]

BLAST of Carg05245 vs. TAIR10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2)

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-12
Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 73  KWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLR 132
           +W+++ + + L+        T +  S +VP      P GI   ++G+ G W AF+A++ R
Sbjct: 87  QWISTISCVALMFAR----GTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTR 146

Query: 133 LFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGF 192
           LFF   FP  LE+P   +LL++ AP + V S+R    G ++ L I C+L  +H   +G  
Sbjct: 147 LFF--SFPVELELPFIALLLVIVAP-YQVMSIRGKQEGAILSLAISCFLAFQHFSRAGTL 206

Query: 193 RNSLTQS 200
           + +  Q+
Sbjct: 207 QKAFDQN 206

[Close]

BLAST of Carg05245 vs. Swiss-Prot
Match: sp|Q9SVL6|CRPM2_ARATH (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.7e-75
Identity = 138/201 (68.66%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 23  MGRMPYLALNSDPL-IDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAI 82
           MGRM YLA+ +D +    ++NSD  ELK+AA +L    +KLGG G G SF K+LASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 83  YLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPD 142
           YLLILDRTNW+T MLTSLL+PYIF SLP  IF+ + GD GKWIAFVAVVLRLFFP+HFPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 143 WLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHG 202
           WLE+PGSLILLLV +P F  H +R    G VI L IGCYLLQEHIRASGGFRNS TQ  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 203 ISNTLGIVLLLVFPVWAMLAR 223
           +SNTLGI+LLLV+PVWA++ R
Sbjct: 181 VSNTLGIILLLVYPVWALIVR 201

[Close]

BLAST of Carg05245 vs. Swiss-Prot
Match: sp|Q9XIM7|CRPM1_ARATH (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.6e-64
Identity = 120/196 (61.22%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 26  MPYLALNSD-PLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIYLL 85
           MP  +L +D   +  ++ SDFNEL IAA  L  HA  L G G GTS  +W+AS AAIYLL
Sbjct: 1   MPMKSLRNDHGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLL 60

Query: 86  ILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDWLE 145
           +LDRTNW+TNMLTSLL+PYIFFSLP  IF + RG+ GKWIAFVAVV++LFFP+H  ++LE
Sbjct: 61  VLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLE 120

Query: 146 IPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGISN 205
           +P +L+LL V AP     + RD   G+ ICL IGCYLLQEHIRASGGFRN+ T+++GISN
Sbjct: 121 LPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISN 180

Query: 206 TLGIVLLLVFPVWAML 221
           T+GI+ L+VFPVWA++
Sbjct: 181 TVGIICLVVFPVWALI 196

[Close]

BLAST of Carg05245 vs. Swiss-Prot
Match: sp|O23164|CRPM4_ARATH (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 8.1e-64
Identity = 114/202 (56.44%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGR  +LA+ ++     ++NSD NE   AA +L+     LGG G GTS  +W AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNW+T MLT+LLVPYIFF+LP  IF    GD GKWIA +A+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIP +LIL++V +P     +LR+   G VICL+I CYL  EHI+ASGGF+NS TQ +GI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GIV LLV+PVW +    F
Sbjct: 181 SNTIGIVALLVYPVWTIFFHIF 202

[Close]

BLAST of Carg05245 vs. Swiss-Prot
Match: sp|O64834|CRPM3_ARATH (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 77/183 (42.08%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 46  NELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIYLLILDRTNWR--TNMLTSLLVPY 105
           NE++  A +LIH     G   + T F +WLAS  A++L+ILD+T W+   N++ SLL PY
Sbjct: 8   NEIQAVAGKLIH---SYGVPVMITLFLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPY 67

Query: 106 IFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVAAPGFFVHS 165
           +F SLP  IF ++R   GKWIA + V+LRLF P HF + LEIPG+ ILL+V  P      
Sbjct: 68  LFSSLPIVIFQVLRNGVGKWIALLTVILRLFLPNHFHESLEIPGATILLIVVTPSDIGAI 127

Query: 166 LRDHL--AGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGISNTLGIVLLLVFPVWAMLA 225
            RD L   G  +CL+   YL+ +H +A GG +NS TQ   ++ ++ + +L V+P+ +  A
Sbjct: 128 FRDDLRYTGGDVCLLTSFYLINKHTKACGGIKNSFTQKDKVTYSICLWILFVYPILSSFA 187

[Close]

BLAST of Carg05245 vs. Swiss-Prot
Match: sp|F4I1G5|CRIM2_ARATH (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 73  KWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLR 132
           +W+++ + + L+        T +  S +VP      P GI   ++G+ G W AF+A++ R
Sbjct: 87  QWISTISCVALMFAR----GTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTR 146

Query: 133 LFFPRHFPDWLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGF 192
           LFF   FP  LE+P   +LL++ AP + V S+R    G ++ L I C+L  +H   +G  
Sbjct: 147 LFF--SFPVELELPFIALLLVIVAP-YQVMSIRGKQEGAILSLAISCFLAFQHFSRAGTL 206

Query: 193 RNSLTQS 200
           + +  Q+
Sbjct: 207 QKAFDQN 206

[Close]

BLAST of Carg05245 vs. TrEMBL
Match: tr|A0A0A0KFI4|A0A0A0KFI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488350 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101
Identity = 181/202 (89.60%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGRM YLALNSDPL++E++NSD +ELKIAATRL+ HA KLGGKGLGTSFFKWLASFAAIY
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNWRTNMLTSLLVPYIFFSLP+GIF+L+RGDAGKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDAGKWIAFVAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIPGSLILLLVA PGFF H+LRDH AGVVICLIIGCYLLQEHIRASGGFRNSLTQ+HGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGCYLLQEHIRASGGFRNSLTQTHGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GI+LLLVFPVWAM+ARFF
Sbjct: 181 SNTIGIILLLVFPVWAMVARFF 202

[Close]

BLAST of Carg05245 vs. TrEMBL
Match: tr|A0A1S3B0J4|A0A1S3B0J4_CUCME (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103484724 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.4e-100
Identity = 180/202 (89.11%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGRM YLALNSDPL++E++NSD +ELKIAATRLI HA KLGGKGLGTSFFKWLASFAAIY
Sbjct: 1   MGRMAYLALNSDPLMEELINSDIHELKIAATRLIEHATKLGGKGLGTSFFKWLASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNWRTNMLTSLLVPYIFFSLP+GIF+L+RGD GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDVGKWIAFVAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LEIPGSLILLLVA PGFF H+LRDH AGV+ICLIIGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 121 LEIPGSLILLLVATPGFFAHTLRDHWAGVLICLIIGCYLLQEHIRASGGFRNSFTQTHGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARFF 225
           SNT+GIVLLLVFPVWAM+ARFF
Sbjct: 181 SNTIGIVLLLVFPVWAMVARFF 202

[Close]

BLAST of Carg05245 vs. TrEMBL
Match: tr|A0A1Q3D3W1|A0A1Q3D3W1_CEPFO (WCOR413 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_11760 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.0e-87
Identity = 156/203 (76.85%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLI-DEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAI 82
           MGRM YLA+ +D  + +E++N+D NELKIAA +LI HA KLGG G+GTSF KWLASFAAI
Sbjct: 1   MGRMDYLAMKTDSSVTEELINADINELKIAAKKLIGHATKLGGLGVGTSFLKWLASFAAI 60

Query: 83  YLLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPD 142
           YLLILDRTNWRTNMLTSLLVPYIFFSLP  +F+ +RGD GKWIAF+AVVLRLFFPRHFPD
Sbjct: 61  YLLILDRTNWRTNMLTSLLVPYIFFSLPSALFNWLRGDVGKWIAFIAVVLRLFFPRHFPD 120

Query: 143 WLEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHG 202
           WLEIPGSLILLLV AP FF H+++D   GV+ICL+IGCYLLQEH+RASGGFRNS TQSHG
Sbjct: 121 WLEIPGSLILLLVVAPNFFAHTMKDSWVGVLICLVIGCYLLQEHVRASGGFRNSFTQSHG 180

Query: 203 ISNTLGIVLLLVFPVWAMLARFF 225
           ISNTLGI+LLLV+PVWA++  FF
Sbjct: 181 ISNTLGIILLLVYPVWALVLHFF 203

[Close]

BLAST of Carg05245 vs. TrEMBL
Match: tr|A0A2P5FXX6|A0A2P5FXX6_9ROSA (Cold-regulated protein OS=Trema orientalis OX=63057 GN=TorRG33x02_016250 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.3e-86
Identity = 155/201 (77.11%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGR  YLA+ +DP   +++NSD ++LKIAATRL++HAAKLGG G GTSF KW+ASFAAIY
Sbjct: 1   MGR-DYLAMKTDPATADLINSDIDDLKIAATRLMNHAAKLGGLGFGTSFLKWVASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNW+TN+LTSLL+PYIFFSLP  +F L+RG+ GKWIAFVAVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPSVLFHLLRGEVGKWIAFVAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LE+PGSLILLLV AP FF H+LRD L GVVICL+IGCYLLQEHIRASGGFRNS TQ+HGI
Sbjct: 121 LELPGSLILLLVVAPSFFAHTLRDSLVGVVICLLIGCYLLQEHIRASGGFRNSFTQTHGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARF 224
           SNT+GI+LLLVFPVWA++  F
Sbjct: 181 SNTVGIILLLVFPVWALVLHF 200

[Close]

BLAST of Carg05245 vs. TrEMBL
Match: tr|A0A2R6S2E8|A0A2R6S2E8_ACTCH (Cold-regulated 413 plasma membrane protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00947 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.3e-86
Identity = 154/201 (76.62%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 23  MGRMPYLALNSDPLIDEILNSDFNELKIAATRLIHHAAKLGGKGLGTSFFKWLASFAAIY 82
           MGRM YLA+ +DP   E++NSD NELKIAA RL +HA KLGG G GTSF KW+ASFAAIY
Sbjct: 1   MGRMDYLAMKTDPAASELINSDINELKIAAKRLFNHATKLGGLGFGTSFLKWVASFAAIY 60

Query: 83  LLILDRTNWRTNMLTSLLVPYIFFSLPEGIFDLVRGDAGKWIAFVAVVLRLFFPRHFPDW 142
           LLILDRTNWRTNMLTSLLVPYIFFSLP  +F+  RG+ GKW+ F+AVVLRLFFPRHFPDW
Sbjct: 61  LLILDRTNWRTNMLTSLLVPYIFFSLPTVLFNFFRGEFGKWVTFIAVVLRLFFPRHFPDW 120

Query: 143 LEIPGSLILLLVAAPGFFVHSLRDHLAGVVICLIIGCYLLQEHIRASGGFRNSLTQSHGI 202
           LE+PGSLILLLV AP FF H+L+D L GV ICLIIGCYLLQEHIRASGGFRNS TQ++GI
Sbjct: 121 LEMPGSLILLLVVAPSFFAHTLKDSLVGVFICLIIGCYLLQEHIRASGGFRNSFTQTNGI 180

Query: 203 SNTLGIVLLLVFPVWAMLARF 224
           SNTLGI+LLLV+PVWA++  F
Sbjct: 181 SNTLGIILLLVYPVWALVIHF 201

The following BLAST results are available for this feature:

BLAST of Carg05245 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962765.1	7.8e-124	99.55	cold-regulated 413 plasma membrane protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_023002994.1	5.1e-123	98.66	cold-regulated 413 plasma membrane protein 2 [Cucurbita maxima]	[more]
XP_023517082.1	9.9e-119	99.54	cold-regulated 413 plasma membrane protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_004142025.1	2.4e-101	89.60	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis sativus] >...	[more]
XP_022133246.1	2.4e-101	89.60	cold-regulated 413 plasma membrane protein 2-like [Momordica charantia]	[more]

BLAST of Carg05245 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50830.1	1.5e-76	68.66	cold-regulated 413-plasma membrane 2	[more]
AT2G15970.1	2.0e-65	61.22	cold regulated 413 plasma membrane 1	[more]
AT4G37220.1	4.5e-65	56.44	Cold acclimation protein WCOR413 family	[more]
AT2G23680.1	1.3e-35	42.08	Cold acclimation protein WCOR413 family	[more]
AT1G29390.1	9.8e-12	30.71	cold regulated 314 thylakoid membrane 2	[more]

BLAST of Carg05245 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVL6\|CRPM2_ARATH	2.7e-75	68.66	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9XIM7\|CRPM1_ARATH	3.6e-64	61.22	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|O23164\|CRPM4_ARATH	8.1e-64	56.44	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|O64834\|CRPM3_ARATH	2.3e-34	42.08	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|F4I1G5\|CRIM2_ARATH	1.8e-10	30.71	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Carg05245 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFI4\|A0A0A0KFI4_CUCSA	1.6e-101	89.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488350 PE=4 SV=1	[more]
tr\|A0A1S3B0J4\|A0A1S3B0J4_CUCME	1.4e-100	89.11	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1Q3D3W1\|A0A1Q3D3W1_CEPFO	3.0e-87	76.85	WCOR413 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]
tr\|A0A2P5FXX6\|A0A2P5FXX6_9ROSA	3.3e-86	77.11	Cold-regulated protein OS=Trema orientalis OX=63057 GN=TorRG33x02_016250 PE=4 SV...	[more]
tr\|A0A2R6S2E8\|A0A2R6S2E8_ACTCH	3.3e-86	76.62	Cold-regulated 413 plasma membrane protein OS=Actinidia chinensis var. chinensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008892	COR413

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05245-RA	Carg05245-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 38..211 e-value: 5.9E-85 score: 283.7
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	FAMILY NOT NAMED	coord: 23..220
None	No IPR available	PANTHER	PTHR33596:SF10	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED	coord: 23..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05245	Cla001791	Watermelon (97103) v1	carwmB0805
Carg05245	Csa6G488350	Cucumber (Chinese Long) v2	carcuB0826
Carg05245	MELO3C007508	Melon (DHL92) v3.5.1	carmeB0807
Carg05245	ClCG01G016380	Watermelon (Charleston Gray)	carwcgB0778
Carg05245	CSPI06G27540	Wild cucumber (PI 183967)	carcpiB0846
Carg05245	Cucsa.101910	Cucumber (Gy14) v1	carcgyB0918
Carg05245	CmaCh07G007380	Cucurbita maxima (Rimu)	carcmaB1130
Carg05245	CmoCh07G007580	Cucurbita moschata (Rifu)	carcmoB1100
Carg05245	Lsi01G010360	Bottle gourd (USVL1VR-Ls)	carlsiB742
Carg05245	Cp4.1LG19g11490	Cucurbita pepo (Zucchini)	carcpeB1135
Carg05245	CsGy6G026910	Cucumber (Gy14) v2	carcgybB0799
Carg05245	MELO3C007508.2	Melon (DHL92) v3.6.1	carmedB0818
Carg05245	CsaV3_6G042690	Cucumber (Chinese Long) v3	carcucB0849
Carg05245	Cla97C01G015380	Watermelon (97103) v2	carwmbB0839
Carg05245	Bhi03G001504	Wax gourd	carwgoB0944

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05245	Watermelon (97103) v2	carwmbB0846
Carg05245	Watermelon (97103) v2	carwmbB0850
Carg05245	Wax gourd	carwgoB0941
Carg05245	Silver-seed gourd	carcarB225
Carg05245	Silver-seed gourd	carcarB428
Carg05245	Cucumber (Gy14) v2	carcgybB0792
Carg05245	Cucumber (Gy14) v2	carcgybB0793
Carg05245	Cucumber (Gy14) v2	carcgybB0800
Carg05245	Cucumber (Gy14) v1	carcgyB0920
Carg05245	Cucumber (Gy14) v1	carcgyB0921
Carg05245	Cucumber (Gy14) v1	carcgyB0924
Carg05245	Cucurbita maxima (Rimu)	carcmaB1118
Carg05245	Cucurbita maxima (Rimu)	carcmaB1125
Carg05245	Cucurbita maxima (Rimu)	carcmaB1127
Carg05245	Cucurbita moschata (Rifu)	carcmoB1089
Carg05245	Cucurbita moschata (Rifu)	carcmoB1095
Carg05245	Cucurbita moschata (Rifu)	carcmoB1097
Carg05245	Cucurbita pepo (Zucchini)	carcpeB1128
Carg05245	Cucurbita pepo (Zucchini)	carcpeB1129
Carg05245	Cucurbita pepo (Zucchini)	carcpeB1130
Carg05245	Wild cucumber (PI 183967)	carcpiB0839
Carg05245	Wild cucumber (PI 183967)	carcpiB0849
Carg05245	Cucumber (Chinese Long) v2	carcuB0819
Carg05245	Cucumber (Chinese Long) v2	carcuB0827
Carg05245	Cucumber (Chinese Long) v3	carcucB0842
Carg05245	Cucumber (Chinese Long) v3	carcucB0843
Carg05245	Bottle gourd (USVL1VR-Ls)	carlsiB738
Carg05245	Bottle gourd (USVL1VR-Ls)	carlsiB746
Carg05245	Melon (DHL92) v3.5.1	carmeB0802
Carg05245	Melon (DHL92) v3.6.1	carmedB0814
Carg05245	Watermelon (Charleston Gray)	carwcgB0786
Carg05245	Watermelon (Charleston Gray)	carwcgB0790
Carg05245	Watermelon (97103) v1	carwmB0802
Carg05245	Watermelon (97103) v1	carwmB0812