Carg05236 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05236
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cyclin H, putative
Location	Cucurbita_argyrosperma_scaffold_010 : 647496 .. 654368 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCGGCACGCTCTCTCCGCTGCAGTCACCCGCCGGCACGCTTCCATCGGCGTAGCCCTACTATTTATTTCTGTTTCTTCTCCGTTGAACGGCGCCGGCACGCCGCCCCTTTTCTGTTGCAGCCGCACGAAAGCAAAAACCTATTAGACTAAAATGTATAATTTAACCAACCTTGGCCTTTTATAATTGGCGGCATTTGTACGAAAGCAAATTGGGTATCCCCGCTGAATCAACGCGCGCCATTGTTCGCAGAACAAAAGCTTGCATCTTTCGTTTCTCTCAGAGCCCTTCACTCACCACAGGTAAGGTTCATACTGCTAATTTCCGTTTGACGCTACTTGAAATAGAAGATTCCAGCTCTTTCTTTACTTTCTCTCTAGACATTGAATCTGTATAGAGGCTGCTGTGACTTGACAGTATAACTGCCTGGTGGAGATACTGAGGTTTCTGAGTAGCCATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTACTTTTCCCTTCCTGTTTTCCCCCTGGCGGTTTGGGAAAAGATAGTTACTATTTCTGCCGCGTAATATTCTTGCTGGGTTCTGATCAAAAGAACTTCGAGTAATCTTAGAATCAATTCTTTGAGATATTTATTTACAATTAGGCTGGTAGTCCTTTATCTCATTTGCGCCCTTTCAATTTCCACGATATGTAATCTCATTTGAGGATATTCCGTTTCTTTAGATTGTTTTATGAAGGAACTGAAGTTTCTTACTTCTACGGTACTTGTGCGAAGTGTATAGTCATATTATCAATTGCTTTAGTTGGACGCATTAGTTTTTTTTTAGTTATTTGTTCTATGACAACTTTCGAGCGAACTTCATTCATAAATGTGCTAGACGATTGTTGGCTTTTGAGGGGTTTCACTTGTATTTAGGACTTGAAGAAGAGTCAATTGTGTATCGTATTTAGGACTTGAAGATCGTATTTAGGACTTGAAGAAGAGTCAATTGTGTATCTAAAGTATGAACACGATTCATATGTTGTACAGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATCGAAGCTCTGGAGAAGGTATGAATAGAATGAGATGATACTTCAATCAGTTGTGTCTACTGTACTAATTTTTATTTTTATTTGAAAGAGCAGTTTTCTCATGCTTTATTTCTTCCCAAAACTCCAAATTGCTGACGGCAATTCCCTTCTTCACTAAATGTGTTTAATTAAAGTATTTGGCGTCTACTTTTATGAGTTTTAATATTACTATCTCTGCCAGCTAACTATCCTCTTGGTCTAGTTTGGAGCAACACTGATGGTGGTAGATGCTGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGGTAACTACTCTTCTGCTGCTCTTTTGCAGGAGCTGAAAACTATAACTCTAGCATTAAATCTTAATGTATAATTACCAACTCTTGGTATGATAGTTTATTTTAATGTCAGCGGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGTATTCAAATAAGATAAGCTGATTGAATGATCCATTTTTCTTTTCACATAAAAAGTCTAATATATTTCAAATATTGAAATTTTTGTTTATATAAATCCCACTTTTATGTTTTTCCTTAGTTTTGTTTACTCTTTGCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTAAGAGTTTAGATGCACATGTGCCTTATGCGTTTGAAGTTTCCCTTATTCAATGTGTTACAACTTGCTATTTGACTTCGCAAAAAATCATTTAGAGGTATGAATGTAATTAAAATGCTTAGCGCTAGAGAAATTGATTGGATGTTGGATGTCCATTTGTAAACTCTTCGTCTTAGGAAGTGTTGCTTCTGCAAATTGTTTCTCTCTCATTGCCACTTATTATCATCATACAAACTGTAGAGTACTTTCGGGATGTAGCTAACCTTCTCCTGCCCAGGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGGCATGGATGTGTCTCATAACTTGTTCTTATCTCGCTCACTTCATTACTTTGGTTCCCCCCTCTATTCTCCCCACCATTTATATATATTTTCTCTTCTCTTATTTCTTTTTCTGTTTTCTAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGTACGTATGGTCTTATTTGTTGATATTATTATTATTATGTGGATTTTCTAAGCAATGCTGAAACAAAATACATCTATTTTCTCTAGGGCATTCTTTACCTTCTTATAACGTTGGCTAAATTTTTTTGTCTTTCATTGTTGTTCCACTTGGTGATAAATGGTGCATGTTTTCAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGTAATTGCTTATTCAATGTAGTTGATATACTGTAGTATGAGTATATCCCTCTTCAAGTTTTTGTGGTCATTCTGTTTTGCCATGTACTGTAGTATGAGTATGTCCGCCCTTATAGTTTTTGTGGTCAATCTGTTTAGCAATATACTGTAGTATGAGTATGTCTGCTCTTCTAGTTTTTGTTGTAAATCTGTTTAGCAATATACTGATTTTAAATTTGTGAAATTTCCTTGCATGGAGACACAAATCATCTCTTGTCTATTTGATGCTAATTTTTTGGTGCTTTCTTCTGAACATTATGTCAATTGGTCAATGTGATCAAAGAAATCTTTGCATGTGTTGACAAAATGCATTGACCAAACAATTAAAACAAGGGGCAGCTAGGAGTCAAGCCCCTAAAACAGCACCTAGCGAGAGTAATTTTTCTATATTCTTAAAAATAACCTTAAACTTTTTCAACTTCAATTGTTGTAAGGTATGCTGGTATTCTTTAGGATTGTCAGAAGCAGGTGTAGGAACTAAATAGAGAGATGAGAAGTGTTTTTTGAGTGAAACATTAAAATATTTTGATAGATCTACCCTCTTTTATAGGCCACAATTTTTTATTGAGGAGTTCATTTTCCATCCCCTTTTTCGTTAGAAGGGAAGGTTTTTGTGGCAGGTGGAGATTTGTATGGTTTTATGGGGTTGGGGGGTGAAAAAAACAATAGTCTATAAAGAGGTCGAGAGAGTTCGTAGTGAGGTTTGATCCACCACTAGGTTCTATGTTTCTCCTTTGTAATTATCTGCTTGGTCTTATTTTACTTGATTGAAACTCTAGTTGATTGGATGCTCTTGTATTCTTTCATTTTTCTGTCAATAGAAGTTCAGTTTCTTCTTAAAAAAATATGTGAAAGTTGCACTCGTATGTTCTCATAACATAGTTTTTCTTTTTTTAGTTCGAACAAGGGTTGGGGTAGAACTTCTAACGTCTAGCCTTTTGTAGAGTTTATTATGCCTTGTTAACTAGTTGACCTGTGTTTGCCCTGGTTGACATACTTTTATCGCTGTTACGTTGAGGAAAAGTCCATGTTTTTCTCCTGTTTCTTCTTTTTAAGCTTTATTTGATATTTTTTTTATTACTTGCATCATGTACTTTCAACAGAATTATCTAATTGTAATTTTCATTAAATTTTGCTCTTTATTTAAAAATTTTAATTTTGTGTTGATTTTGCTTGTGAATTCTGCAGGAAAAAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGGTGCTTATTTTCTATTACACTTCCTGTAAGGAACTTACTACTTTAGGACTTGAAACTTTCTACGTTGATCTTCAAGTATCCTGGTGCAATAATTGAATTTATTTCAGGATTGAGCTTAAACTTTTGAGTTTACCCTTGACTAATAATTCTTCAGTGGAAAGTGGAGGGTGGAAGGCTGCTGTGTGTGTGTGTAGTGGGTGGGTGGATGGGGGGAGGGGAGGGGGGGGTTGGGCAGCCTCTATTAACAGTCTTTCAGGGAGGTAGAATTTTGTTATAGGTTCTATTCCTCTTAAGTTCCTATTCAGTAATTAGATTTCATAATTTGATAACTTTGTTACGTTCTATCTGTTTCAATCTTATTGATCACATGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTGAGAAGTTACTACTTACCTAGATTCGTTTAGTTATTTTTAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATTGATTTATTGGCTTTGAAAGGTGCAAAGATACCACTTATCTAGTTTCATTGAATTATTTAAAATTTCCCTCCCATAAAAAATTACGATGGTGGACTTCTAATTGCATGGCATGCATGCTTTTAGGAAATTTCATTGGAGATTCTAATTCTGTTGAAGCTCTTGTATTGGTTAGGTAGTCTATTTTGGCCTTCTAATGCCCTTTCATTTATTTTAATGAAAGCTTGTTTATTTATTTTAAAAACTTGAGAAATGATGGATTTATGGATTATTTGTAATCGTCCATTGACGTCTGCTAATATTTAACAATTGAACCCTTTTTATAAGTTTGGCTCTTCTTTTGGGCTTGTCTTTTTGTATGGAAGTGAAACTATGATCTTTATTTTATGCTTTCATTTGTTGAAAGCTGATTGTGTTTAATAAAAGAAAAACAAATATATCTTTCCATCTTTAATTGGCAACATTCTGTTGTTTCCATCCCTTACGTGCAATGGTTCACTTATTCTTCTCAGTTCATGTGTAGGTACCTGGACAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAATTCAATTGACTCATGGGTATGAACTTGTCTTTTTCTCTTAACTGATTCAATCAGTAGTCTAAAACGTATACTGTTGTAGTAGTAGTAGGAGAATAAATTTAGCTTATTCCCTCTTTCGGAAATTTTGTATCAGTATCTCCTACGAACTTGTGGTTGTAGGCTACATTCTAATGCGCTAGTGTGTTGTACTTTTTTTACAGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGTATTTTATACAAACTTGTGATATCTTGAATAGAATTAGTCTACCTCTTGCTTAGTTTAGTACCCCCTCTTATCTTGTTTCCCAGCTGCTAATTACAAATTGTATCAAAACTTGGCAGGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAGAATATGCCTTCGCACACTTAGCTGTATGTCTGTTTTCCACCAGTTATATTTTGGTAGGCTGATACAATTATTCCATCCTGGTACTTTGTTGTCAGTTGTATTTTTAGTCTTTAAGAAGAAATAGAAAAATACAGTCAATAACCACGCGAATGAAAAAGGATAGTGGCAGCGAAACATTTTATAAATTATTGTGGCATGTTATTCTAAATGAGAACTGTTGTTACTACCAATATATCTCTTTTCAAGACGTCTTCGTCTTTGAAATTATTTATAAAACAAAACCCCTTGGATCAAATATCAAGAAACCATTCATGTTTCTCCTTATACTTCCCTCTCACTGAAAATTATCAACGCGGCTACCACCCTCTAGATCATTGAATGTTTACTAAATCATTACTTTTGGTTTCTCTCCTACATCCAGTATAAAATCACTAGTCACATTGTGCAGCCTCCTTAAATAATTTCACCTCTCCCACCCAAACTCTAAATTACTCCCTCCCAAATGATTAATGAAAGAAGCCTAGATCTTGAAGTGATTTACGTTTGTCTCTTTTTTTTAGGTACGCAAATCTCAGCAGGGGACTGACAAAAAAGGAGAGCTAGGCAATTGGAAGAAGGTTAGTTTTGAATCTGCCCCCCCACTAACCGCCCCCCCCCGACCCCCCCCCCCCCCCAACAAAAAAAAATGTAATGAGATTTTGAAAGAGTAGACGCGCTGTAGTATTTTCCTGTGGTCAAAGGAAATTCCCTGTTCATATCTACATAAATTTTAGGGATGTATGAATTTAAAAAATGCAATTAAACATACCTTTCCTCTGGAATCGAAATAATGTGAAAACTGTTTTAGAAATATAGAAATGAGCATGGCACATTATTTTGTTTTCTTTGCCCCAGAGTGTTCACAAATTAAGTTTAGATCCTGCGTGTAAAGTGAAGAACATTGTAGGCTTCTTGGTGGTACTCTTAGCCACCCATGCTTCTGCTGACAATATTTTCTTTCATACAGGCAACTCAACCTTCGCGTTGGTTAGTGGGTTTTCTGCATGAAACCGATATCCTTAAGCGGCGTTCAATATGAAAATATGGAAAAGGAAAACATCATATCAAGCACTGAGAAAATTTGCCCCCTCTTTGGTACTCATTCTCTGATTTTATTCTTTTCTTCAGTCAGCGATATTTCTGGTCAGTAACCAAGTAATTTCTGCCGTGTAATGATAACATTACGACAAAATTTTGAATTTTAGACTTATTCTCTGTCTTGGATTTTATTTCTCATTTTGTTCTCTCAATTGAAGAGCTTTTTCATACATCTTTTCCTTCGGAATGCGGGATGAAGTCCCATCTTCCTAATTCTAATTCTCC

mRNA sequence

TGCCGGCACGCTCTCTCCGCTGCAGTCACCCGCCGGCACGCTTCCATCGGCGTAGCCCTACTATTTATTTCTGTTTCTTCTCCGTTGAACGGCGCCGGCACGCCGCCCCTTTTCTGTTGCAGCCGCACGAAAGCAAAAACCTATTAGACTAAAATGTATAATTTAACCAACCTTGGCCTTTTATAATTGGCGGCATTTGTACGAAAGCAAATTGGGTATCCCCGCTGAATCAACGCGCGCCATTGTTCGCAGAACAAAAGCTTGCATCTTTCGTTTCTCTCAGAGCCCTTCACTCACCACAGAGGCTGCTGTGACTTGACAGTATAACTGCCTGGTGGAGATACTGAGGTTTCTGAGTAGCCATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATCGAAGCTCTGGAGAAGTTTGGAGCAACACTGATGGTGGTAGATGCTGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGCGGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGGCATGGATGTGTCTCATAACTTGTTCTTATCTCGCTCACTTCATTACTTTGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGAAAAAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTACCTGGACAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAATTCAATTGACTCATGGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAGAATATGCCTTCGCACACTTAGCTGTACGCAAATCTCAGCAGGGGACTGACAAAAAAGGAGAGCTAGGCAATTGGAAGAAGGCAACTCAACCTTCGCGTTGGTTAGTGGGTTTTCTGCATGAAACCGATATCCTTAAGCGGCGTTCAATATGAAAATATGGAAAAGGAAAACATCATATCAAGCACTGAGAAAATTTGCCCCCTCTTTGGTACTCATTCTCTGATTTTATTCTTTTCTTCAGTCAGCGATATTTCTGGTCAGTAACCAAGTAATTTCTGCCGTGTAATGATAACATTACGACAAAATTTTGAATTTTAGACTTATTCTCTGTCTTGGATTTTATTTCTCATTTTGTTCTCTCAATTGAAGAGCTTTTTCATACATCTTTTCCTTCGGAATGCGGGATGAAGTCCCATCTTCCTAATTCTAATTCTCC

Coding sequence (CDS)

ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATCGAAGCTCTGGAGAAGTTTGGAGCAACACTGATGGTGGTAGATGCTGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGCGGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGGCATGGATGTGTCTCATAACTTGTTCTTATCTCGCTCACTTCATTACTTTGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGAAAAAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTACCTGGACAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAATTCAATTGACTCATGGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAGAATATGCCTTCGCACACTTAG

Protein sequence

MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLAHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMQNMPSHT

Homology

[Close]

BLAST of Carg05236 vs. NCBI nr
Match: XP_023518875.1 (cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518876.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518878.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518879.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.2 bits (1606), Expect = 5.2e-175
Identity = 331/349 (94.84%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS
Sbjct: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKE ASLEVDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 332

[Close]

BLAST of Carg05236 vs. NCBI nr
Match: XP_023003598.1 (cyclin-H1-1 isoform X1 [Cucurbita maxima] >XP_023003599.1 cyclin-H1-1 isoform X1 [Cucurbita maxima] >XP_023003600.1 cyclin-H1-1 isoform X1 [Cucurbita maxima] >XP_023003601.1 cyclin-H1-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 622.1 bits (1603), Expect = 1.2e-174
Identity = 330/349 (94.56%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWIL+PHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS
Sbjct: 1   MADFQTSTQRAKWILNPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKE ASLEVDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEAASLEVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 332

[Close]

BLAST of Carg05236 vs. NCBI nr
Match: XP_022963350.1 (cyclin-H1-1 [Cucurbita moschata] >XP_022963351.1 cyclin-H1-1 [Cucurbita moschata] >XP_022963352.1 cyclin-H1-1 [Cucurbita moschata] >XP_022963353.1 cyclin-H1-1 [Cucurbita moschata])

HSP 1 Score: 619.8 bits (1597), Expect = 5.8e-174
Identity = 329/349 (94.27%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS
Sbjct: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKE ASLEVDKIMLTD PLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDGPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERF+SIDSWINKYAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFSSIDSWINKYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 332

[Close]

BLAST of Carg05236 vs. NCBI nr
Match: XP_022133124.1 (cyclin-H1-1 [Momordica charantia])

HSP 1 Score: 568.5 bits (1464), Expect = 1.5e-158
Identity = 303/348 (87.07%), Postives = 316/348 (90.80%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWIL+P ELVGRY+AANQ AI ALEKFGATLM VDADGSLSYPDP INS
Sbjct: 1   MADFQTSTQRAKWILTPQELVGRYRAANQGAIGALEKFGATLMEVDADGSLSYPDPQINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K++ADKHSRPK LSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KDHADKHSRPKALSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGY++DME++FHENAE LQ+LKE ASLEVDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYINDMEDLFHENAEMLQVLKETASLEVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAAL RSNEVH VIDFERYL+SI SRQ+ AH ISELYER NSIDSW+N+YAFP
Sbjct: 241 FPPGQLALAALCRSNEVHAVIDFERYLESIFSRQSYAHEISELYERLNSIDSWVNRYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSH 349
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMP H
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPLH 331

[Close]

BLAST of Carg05236 vs. NCBI nr
Match: XP_008440225.1 (PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo] >XP_008440226.1 PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 9.2e-156
Identity = 301/348 (86.49%), Postives = 312/348 (89.66%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWILSP EL  RYKAANQRAIEALEKFGA+LM VDADGSLSYPDP IN 
Sbjct: 1   MADFQTSTQRAKWILSPQELGCRYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINL 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K++ADKHSRPK LSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KDHADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYV+D+EE+FHENAE LQMLK  ASL+VDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQMLKATASLDVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDF  YLDSILSRQNS H ISELYE  N+I+S +N+YAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHTISELYEGINAIESLVNRYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSH 349
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQN P H
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNRPLH 331

[Close]

BLAST of Carg05236 vs. TAIR10
Match: AT5G27620.1 (cyclin H;1)

HSP 1 Score: 392.1 bits (1006), Expect = 3.5e-109
Identity = 204/328 (62.20%), Postives = 249/328 (75.91%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWI +P +L  RYKAANQRA++ LEK G T + VDA GSL+YP   + S
Sbjct: 1   MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
            + ADK  + KPLS +EE+FMR FYE K+QEVC+ F FPHKIQATAL YFKRFYLQWSVM
Sbjct: 61  GDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QH+PK +MLTC+YAACKIEENHVSAEE+GKGI+QDH+IIL YEM V Q            
Sbjct: 121 QHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFH---ENAERLQMLKEKASLEVDKIMLTDA 240
                SLEFDLIVYAPYR++EG+V++MEE      +  ++L+ L + A+ E DK+MLTDA
Sbjct: 181 -----SLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDA 240

Query: 241 PLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKY 300
           PLLFPPGQLALA+LR +N V GVIDF+RYL++I+S+ NS H  SEL +  ++I+  +  Y
Sbjct: 241 PLLFPPGQLALASLRIANGVLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNY 300

Query: 301 AFPSEKDLKHINRKLKSCWG-LGSNDES 325
             PSEKD+KHINRKLKSC G   S+DES
Sbjct: 301 KCPSEKDMKHINRKLKSCLGHSSSHDES 309

[Close]

BLAST of Carg05236 vs. TAIR10
Match: AT5G48640.1 (Cyclin family protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 58/235 (24.68%), Postives = 111/235 (47.23%), Query Frame = 0


Query: 69  RPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVM 128
           + + +SI++ + ++    N + ++  +     ++ ATA+ Y +R Y++ S+++  P+ V 
Sbjct: 28  KERGISIDDFKLIKFHMSNHIMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVA 87

Query: 129 LTCIYAACKIEENHVSAEELGKGISQ---------DHQIILNYEMIVYQAWMCLITCSYL 188
           LTC+Y A K EE+ V A  L   I +         + + IL  EM V +A          
Sbjct: 88  LTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELKDILGMEMKVLEA---------- 147

Query: 189 AHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPL 248
                  L++ L+V+ PYRS+  ++ D   +   N  ++       + ++D I      L
Sbjct: 148 -------LDYYLVVFHPYRSLSEFLQD-AALNDVNMNQITWGIVNDTYKMDLI------L 207

Query: 249 LFPPGQLALAALRRSNEVHGVID----FERYLDSILSRQNSAHIISELYERFNSI 291
           + PP ++ALA +  ++ VH   D    FE   + +   +N A  I + YE + +I
Sbjct: 208 VHPPYRIALACIYIAS-VHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTI 237

[Close]

BLAST of Carg05236 vs. TAIR10
Match: AT1G35440.1 (cyclin T1;1)

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 55/195 (28.21%), Postives = 96/195 (49.23%), Query Frame = 0


Query: 59  NSKENADK--HSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQ 118
           N++E  +K   SR   ++++EE F R  Y + LQE+    + P K  ATA++  +RF+ +
Sbjct: 9   NTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTR 68

Query: 119 WSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITC 178
            S+ +++PK V + C++ A K+E    S    G  +   ++++ N E +        +T 
Sbjct: 69  QSLTKNDPKTVAIICMFIAGKVEG---SPRPAGDVVFVSYRVLFNKEPLRDVFERLKMTV 128

Query: 179 SYLAHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTD 238
                 +  +LE DL +  PY+ V  +V     V  E+  R   L + A   V+  + T 
Sbjct: 129 LTGEKLVLSTLECDLEIEHPYKLVMDWV--KRSVKTEDGRR---LCQAAFNFVNDSLRTS 188

Query: 239 APLLFPPGQLALAAL 252
             L F P Q+A AA+
Sbjct: 189 LCLQFGPSQIASAAI 195

[Close]

BLAST of Carg05236 vs. TAIR10
Match: AT5G48630.2 (Cyclin family protein)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-09
Identity = 40/143 (27.97%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 73  LSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCI 132
           +S+E+ + +++   N + ++  +     ++ ATA+ Y +R Y + S+ ++ P+ V  TC+
Sbjct: 35  ISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCL 94

Query: 133 YAACKIEENHVSAEEL---GKGISQDHQI------ILNYEMIVYQAWMCLITCSYLAHFI 192
           Y ACK EE+ V A+ L    K +  D +       IL  EM V +A              
Sbjct: 95  YLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKVLEA-------------- 154

Query: 193 TLSLEFDLIVYAPYRSVEGYVHD 207
              L F L+V+ PYRS+  ++ D
Sbjct: 155 ---LNFYLVVFHPYRSLPEFLQD 160

[Close]

BLAST of Carg05236 vs. Swiss-Prot
Match: sp|Q8W5S1|CCH11_ARATH (Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 6.4e-108
Identity = 204/328 (62.20%), Postives = 249/328 (75.91%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWI +P +L  RYKAANQRA++ LEK G T + VDA GSL+YP   + S
Sbjct: 1   MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
            + ADK  + KPLS +EE+FMR FYE K+QEVC+ F FPHKIQATAL YFKRFYLQWSVM
Sbjct: 61  GDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QH+PK +MLTC+YAACKIEENHVSAEE+GKGI+QDH+IIL YEM V Q            
Sbjct: 121 QHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFH---ENAERLQMLKEKASLEVDKIMLTDA 240
                SLEFDLIVYAPYR++EG+V++MEE      +  ++L+ L + A+ E DK+MLTDA
Sbjct: 181 -----SLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDA 240

Query: 241 PLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKY 300
           PLLFPPGQLALA+LR +N V GVIDF+RYL++I+S+ NS H  SEL +  ++I+  +  Y
Sbjct: 241 PLLFPPGQLALASLRIANGVLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNY 300

Query: 301 AFPSEKDLKHINRKLKSCWG-LGSNDES 325
             PSEKD+KHINRKLKSC G   S+DES
Sbjct: 301 KCPSEKDMKHINRKLKSCLGHSSSHDES 309

[Close]

BLAST of Carg05236 vs. Swiss-Prot
Match: sp|Q10D80|CCH11_ORYSJ (Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.1e-97
Identity = 186/330 (56.36%), Postives = 239/330 (72.42%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVD-ADGSLSYPDPLIN 60
           MADF+TST R +WI   ++L+ R+ AANQRA E L ++G T + VD  DGSLSYP+P   
Sbjct: 1   MADFRTSTHRERWIFQTNDLMDRWGAANQRATETLVQYGTTRLKVDPVDGSLSYPEP--- 60

Query: 61  SKENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSV 120
           + ++    S  KPLS EEE+ MRVFYE K+QEVC+ F FPHKIQATA+IYFKRFYLQWSV
Sbjct: 61  APDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSV 120

Query: 121 MQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYL 180
           M+H+PK++MLTCIY++CK+EENHVSAEELGKGI QDHQIILN EMIV +           
Sbjct: 121 MEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQIILNNEMIVLK----------- 180

Query: 181 AHFITLSLEFDLIVYAPYRSVEGYVHDMEE---VFHENAERLQMLKEKASLEVDKIMLTD 240
                 SL+FDLIVYAPYRS+EG+V DME+     +   +RLQ L++ A  +VDK+MLTD
Sbjct: 181 ------SLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDLRQTAISQVDKMMLTD 240

Query: 241 APLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINK 300
           APLL+ PGQLALAAL +SN++H +++FERYL+S+ SRQ+S   I +     N I+  + +
Sbjct: 241 APLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQHSDCPIEQFVGSINMINYLVEQ 300

Query: 301 YAFPSEKDLKHINRKLKSCWGLGSNDESKK 327
              P+ KD++HI+RKLK C    S DE KK
Sbjct: 301 LKIPTPKDMRHIDRKLKHCLDPSSQDEHKK 310

[Close]

BLAST of Carg05236 vs. Swiss-Prot
Match: sp|P51946|CCNH_HUMAN (Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 96/321 (29.91%), Postives = 157/321 (48.91%), Query Frame = 0


Query: 4   FQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKEN 63
           +  S+Q+  W  S  E + R +A      +A  KF    +   A+G +   DP+      
Sbjct: 2   YHNSSQKRHWTFSSEEQLARLRA------DANRKFRCKAV---ANGKVLPNDPVF----- 61

Query: 64  ADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQ 123
                    L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+
Sbjct: 62  ---------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVME 121

Query: 124 HNPKNVMLTCIYAACKIEENHVSA-------EELGKGISQDHQIILNYEMIVYQAWMCLI 183
           ++P+ +MLTC + ACK++E +VS+        E   G  +  + IL YE+++ Q      
Sbjct: 122 YHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQ------ 181

Query: 184 TCSYLAHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIML 243
                       L F LIV+ PYR  EG++ D+ +  +   E  ++L++ A   +++I L
Sbjct: 182 -----------QLNFHLIVHNPYRPFEGFLIDL-KTRYPILENPEILRKTADDFLNRIAL 241

Query: 244 TDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWI 303
           TDA LL+ P Q+AL A+  S    G I  E YL   L  + +   +S+L +   S+ + +
Sbjct: 242 TDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLV 280

Query: 304 NKYAFPSEKDLKHINRKLKSC 316
            KY  P  +++  + +KL+ C
Sbjct: 302 KKYEPPRSEEVAVLKQKLERC 280

[Close]

BLAST of Carg05236 vs. Swiss-Prot
Match: sp|Q4R7U4|CCNH_MACFA (Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 96/321 (29.91%), Postives = 157/321 (48.91%), Query Frame = 0


Query: 4   FQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKEN 63
           +  S+Q+  W  S  E + R +A      +A  KF    +   A+G +   DP+      
Sbjct: 2   YHNSSQKRHWTFSSEEQLARLRA------DANRKFRCKAV---ANGKVLPNDPVF----- 61

Query: 64  ADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQ 123
                    L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+
Sbjct: 62  ---------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVME 121

Query: 124 HNPKNVMLTCIYAACKIEENHVSA-------EELGKGISQDHQIILNYEMIVYQAWMCLI 183
           ++P+ +MLTC + ACK++E +VS+        E   G  +  + IL YE+++ Q      
Sbjct: 122 YHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQ------ 181

Query: 184 TCSYLAHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIML 243
                       L F LIV+ PYR  EG++ D+ +  +   E  ++L++ A   +++I L
Sbjct: 182 -----------QLNFHLIVHNPYRPFEGFLIDL-KTRYPILENPEILRKTADDFLNRIAL 241

Query: 244 TDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWI 303
           TDA LL+ P Q+AL A+  S    G I  E YL   L  + +   +S+L +   S+ + +
Sbjct: 242 TDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLRENRTCLSQLLDIMKSMRNLV 280

Query: 304 NKYAFPSEKDLKHINRKLKSC 316
            KY  P  +++  + +KL+ C
Sbjct: 302 KKYEPPRSEEVAVLKQKLERC 280

[Close]

BLAST of Carg05236 vs. Swiss-Prot
Match: sp|Q9R1A0|CCNH_RAT (Cyclin-H OS=Rattus norvegicus OX=10116 GN=Ccnh PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 96/321 (29.91%), Postives = 156/321 (48.60%), Query Frame = 0


Query: 4   FQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKEN 63
           +  S+Q+  W  +  E + R +A      +A  KF    +   A+G +   DPL      
Sbjct: 2   YHNSSQKRHWTFASEEQLARLRA------DANRKFKCKAV---ANGKVLPNDPLF----- 61

Query: 64  ADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQ 123
                    L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+
Sbjct: 62  ---------LEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVME 121

Query: 124 HNPKNVMLTCIYAACKIEENHVSA-------EELGKGISQDHQIILNYEMIVYQAWMCLI 183
           ++P+ +MLTC + ACK++E +VS+        E   G  +  + IL YE+++ Q      
Sbjct: 122 YHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQ------ 181

Query: 184 TCSYLAHFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIML 243
                       L F LIV+ PYR  EG++ D+ +  +   E  ++L++ A   + +I L
Sbjct: 182 -----------QLNFHLIVHNPYRPFEGFLIDI-KTRYPMLENPEILRKTADDFLSRIAL 241

Query: 244 TDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWI 303
           TDA LL+ P Q+AL A+  S    G I  E YL   L  + +   +S+L +   S+ + +
Sbjct: 242 TDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLV 280

Query: 304 NKYAFPSEKDLKHINRKLKSC 316
            KY  P  +++  + +KL+ C
Sbjct: 302 KKYEPPRSEEVAILKQKLERC 280

[Close]

BLAST of Carg05236 vs. TrEMBL
Match: tr|A0A1S3B075|A0A1S3B075_CUCME (cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 6.1e-156
Identity = 301/348 (86.49%), Postives = 312/348 (89.66%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWILSP EL  RYKAANQRAIEALEKFGA+LM VDADGSLSYPDP IN 
Sbjct: 1   MADFQTSTQRAKWILSPQELGCRYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINL 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K++ADKHSRPK LSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KDHADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYV+D+EE+FHENAE LQMLK  ASL+VDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQMLKATASLDVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDF  YLDSILSRQNS H ISELYE  N+I+S +N+YAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHTISELYEGINAIESLVNRYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSH 349
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQN P H
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNRPLH 331

[Close]

BLAST of Carg05236 vs. TrEMBL
Match: tr|A0A0A0KJE5|A0A0A0KJE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490020 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.0e-155
Identity = 301/346 (86.99%), Postives = 311/346 (89.88%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTSTQRAKWILSP EL GRY AANQRAIEALEKFGA LM VDADGSLSYPDP INS
Sbjct: 1   MADFQTSTQRAKWILSPQELGGRYNAANQRAIEALEKFGAALMEVDADGSLSYPDPQINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K++ADKHSRPK LSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KDHADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ            
Sbjct: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKEKASLEVDKIMLTDAPLL 240
                SLEFDLIVYAPYRSVEGYV+D+EE+F+ENAE LQMLK  ASLEVDKIMLTDAPLL
Sbjct: 181 -----SLEFDLIVYAPYRSVEGYVNDIEELFNENAEMLQMLKVTASLEVDKIMLTDAPLL 240

Query: 241 FPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFP 300
           FPPGQLALAALRRSNEVHGVIDF  YLDSILSRQNS H ISELYE  N+I+S +N+YAFP
Sbjct: 241 FPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHTISELYEGINAIESLVNRYAFP 300

Query: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMP 347
           SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQN P
Sbjct: 301 SEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNRP 329

[Close]

BLAST of Carg05236 vs. TrEMBL
Match: tr|A0A251NYT9|A0A251NYT9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G323600 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 8.0e-140
Identity = 253/352 (71.88%), Postives = 285/352 (80.97%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTST RAKWI +P ELVG+YKAANQRAI+ LEK+GATLM VD DG++SYP+P + +
Sbjct: 1   MADFQTSTHRAKWIFTPEELVGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIA 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K+NADKHSRPKP+SIEEEQFMRVFYENKLQEVC NFHFPHK+QATALIYFKRFYLQWSVM
Sbjct: 61  KDNADKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QH+PKN+MLTCIYAACKIEENHVSAEELGKGISQDHQ+ILN EMIVYQ            
Sbjct: 121 QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLK---EKASLEVDKIMLTDA 240
                SLEFDLIVYAPYRS+EG++ DMEE    N +RLQ+L+     A +EVDKIMLTDA
Sbjct: 181 -----SLEFDLIVYAPYRSIEGFIDDMEEFCGINDDRLQILQNLLHAAKMEVDKIMLTDA 240

Query: 241 PLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKY 300
           PLLFPPGQLALAALR +N+VH V+DFERYL SILSRQ+S H +SEL E  N+IDSW  KY
Sbjct: 241 PLLFPPGQLALAALRSANQVHKVVDFERYLRSILSRQSSEHTVSELVEFLNAIDSWARKY 300

Query: 301 AFPSEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
            FPS+KDLKHINRKLKSCWGL S+DESKK               +Q +PSHT
Sbjct: 301 KFPSDKDLKHINRKLKSCWGLSSHDESKKRDKKSKHKSKRSSNEVQPVPSHT 335

[Close]

BLAST of Carg05236 vs. TrEMBL
Match: tr|A0A2P4IT20|A0A2P4IT20_QUESU (Cyclin-h1-1 OS=Quercus suber OX=58331 GN=CFP56_37482 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 2.6e-138
Identity = 268/352 (76.14%), Postives = 296/352 (84.09%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTST RA WI +  EL  +Y AA QRAI+ LEK+GATLM VD DG+LSYP+P INS
Sbjct: 1   MADFQTSTHRANWIFTTQELDDKYNAARQRAIQTLEKYGATLMEVDVDGTLSYPEPQINS 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K+NADKHSRPKPL+IEEE++MRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
Sbjct: 61  KDNADKHSRPKPLTIEEERYMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QH+PKN+MLTCIYAACKIEENHVSAEELGKGISQDHQ+ILN EMIVYQ            
Sbjct: 121 QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQLILNNEMIVYQ------------ 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLK---EKASLEVDKIMLTDA 240
                SLEFDLIVYAPYRS++G+V+DMEE      ++L +LK   E A +EVDKIMLTDA
Sbjct: 181 -----SLEFDLIVYAPYRSIDGFVNDMEEFCPVKDDQLHVLKAIHETARMEVDKIMLTDA 240

Query: 241 PLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKY 300
           PLLFPPGQLALAALR SNEVH V+DFERYL SILSRQ+SAH +SEL E  NSIDSW+  Y
Sbjct: 241 PLLFPPGQLALAALRSSNEVHKVLDFERYLRSILSRQSSAHTVSELIESLNSIDSWVRGY 300

Query: 301 AFPSEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
            FPSEKDLKHINRKLKSCWGL S+DESKK XXXXXXXXXXXXXX Q++PSHT
Sbjct: 301 KFPSEKDLKHINRKLKSCWGLSSHDESKKRXXXXXXXXXXXXXXXQSVPSHT 335

[Close]

BLAST of Carg05236 vs. TrEMBL
Match: tr|M5VZ28|M5VZ28_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa008262mg PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.3e-137
Identity = 250/352 (71.02%), Postives = 282/352 (80.11%), Query Frame = 0


Query: 1   MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS 60
           MADFQTST RAKWI +P ELVG+YKAANQRAI+ LEK+GATLM VD DG++SYP+P + +
Sbjct: 1   MADFQTSTHRAKWIFTPEELVGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIA 60

Query: 61  KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM 120
           K+NADKHSRPKP+SIEEEQFMRVFYENKLQEVC NFHFPHK+QATALIYFKRFYLQWSVM
Sbjct: 61  KDNADKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVM 120

Query: 121 QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQAWMCLITCSYLA 180
           QH+PKN+MLTCIYAACKIEENHVSAEELGKGISQDHQ+ILN EMI               
Sbjct: 121 QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMI--------------- 180

Query: 181 HFITLSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLK---EKASLEVDKIMLTDA 240
                SLEFDLIVYAPYRS+EG++ DMEE    N +RLQ+L+     A +EVDKIMLTDA
Sbjct: 181 -----SLEFDLIVYAPYRSIEGFIDDMEEFCGINDDRLQILQNLLHAAKMEVDKIMLTDA 240

Query: 241 PLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKY 300
           PLLFPPGQLALAALR +N+VH V+DFERYL SILSRQ+S H +SEL E  N+IDSW  KY
Sbjct: 241 PLLFPPGQLALAALRSANQVHKVVDFERYLRSILSRQSSEHTVSELVEFLNAIDSWARKY 300

Query: 301 AFPSEKDLKHINRKLKSCWGLGSNDESKKXXXXXXXXXXXXXXXMQNMPSHT 350
            FPS+KDLKHINRKLKSCWGL S+DESKK               +Q +PSHT
Sbjct: 301 KFPSDKDLKHINRKLKSCWGLSSHDESKKRDKKSKHKSKRSSNEVQPVPSHT 332

The following BLAST results are available for this feature:

BLAST of Carg05236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518875.1	5.2e-175	94.84	cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518876.1 cyclin-H1-1 [Cucurbita ...	[more]
XP_023003598.1	1.2e-174	94.56	cyclin-H1-1 isoform X1 [Cucurbita maxima] >XP_023003599.1 cyclin-H1-1 isoform X1...	[more]
XP_022963350.1	5.8e-174	94.27	cyclin-H1-1 [Cucurbita moschata] >XP_022963351.1 cyclin-H1-1 [Cucurbita moschata...	[more]
XP_022133124.1	1.5e-158	87.07	cyclin-H1-1 [Momordica charantia]	[more]
XP_008440225.1	9.2e-156	86.49	PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo] >XP_008440226.1 PREDICTED: cycl...	[more]

BLAST of Carg05236 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27620.1	3.5e-109	62.20	cyclin H;1	[more]
AT5G48640.1	1.4e-09	24.68	Cyclin family protein	[more]
AT1G35440.1	2.4e-09	28.21	cyclin T1;1	[more]
AT5G48630.2	4.2e-09	27.97	Cyclin family protein	[more]

BLAST of Carg05236 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W5S1\|CCH11_ARATH	6.4e-108	62.20	Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1	[more]
sp\|Q10D80\|CCH11_ORYSJ	5.1e-97	56.36	Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1	[more]
sp\|P51946\|CCNH_HUMAN	1.7e-28	29.91	Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1	[more]
sp\|Q4R7U4\|CCNH_MACFA	1.7e-28	29.91	Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1	[more]
sp\|Q9R1A0\|CCNH_RAT	2.2e-28	29.91	Cyclin-H OS=Rattus norvegicus OX=10116 GN=Ccnh PE=1 SV=2	[more]

BLAST of Carg05236 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B075\|A0A1S3B075_CUCME	6.1e-156	86.49	cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1	[more]
tr\|A0A0A0KJE5\|A0A0A0KJE5_CUCSA	1.0e-155	86.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490020 PE=3 SV=1	[more]
tr\|A0A251NYT9\|A0A251NYT9_PRUPE	8.0e-140	71.88	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G323600 PE=3 SV=1	[more]
tr\|A0A2P4IT20\|A0A2P4IT20_QUESU	2.6e-138	76.14	Cyclin-h1-1 OS=Quercus suber OX=58331 GN=CFP56_37482 PE=3 SV=1	[more]
tr\|M5VZ28\|M5VZ28_PRUPE	1.3e-137	71.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa008262mg PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR031658	Cyclin_C_2
IPR006671	Cyclin_N
IPR013763	Cyclin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05236-RA	Carg05236-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 87..168 e-value: 6.5E-15 score: 65.5
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 81..167 e-value: 1.0196E-14 score: 67.6488
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 61..195 e-value: 2.6E-54 score: 186.3 coord: 299..315 e-value: 2.6E-54 score: 186.3
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 196..298 e-value: 2.6E-54 score: 186.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..349
None	No IPR available	PANTHER	PTHR10026	CYCLIN	coord: 3..343
None	No IPR available	PANTHER	PTHR10026:SF8	CYCLIN-H	coord: 3..343
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 67..143 e-value: 4.6E-10 score: 39.3
IPR031658	Cyclin, C-terminal domain 2	PFAM	PF16899	Cyclin_C_2	coord: 196..315 e-value: 1.3E-13 score: 51.1
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 196..317
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 66..168

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05236	Cla001811	Watermelon (97103) v1	carwmB0805
Carg05236	Csa6G490020	Cucumber (Chinese Long) v2	carcuB0826
Carg05236	MELO3C007526	Melon (DHL92) v3.5.1	carmeB0807
Carg05236	ClCG01G016560	Watermelon (Charleston Gray)	carwcgB0778
Carg05236	CSPI06G27710	Wild cucumber (PI 183967)	carcpiB0846
Carg05236	Cucsa.102110	Cucumber (Gy14) v1	carcgyB0918
Carg05236	CmaCh07G007290	Cucurbita maxima (Rimu)	carcmaB1130
Carg05236	CmaCh03G010030	Cucurbita maxima (Rimu)	carcmaB1125
Carg05236	CmoCh07G007460	Cucurbita moschata (Rifu)	carcmoB1100
Carg05236	CmoCh03G010130	Cucurbita moschata (Rifu)	carcmoB1095
Carg05236	Lsi01G010110	Bottle gourd (USVL1VR-Ls)	carlsiB742
Carg05236	Cp4.1LG10g02790	Cucurbita pepo (Zucchini)	carcpeB1128
Carg05236	Cp4.1LG19g11620	Cucurbita pepo (Zucchini)	carcpeB1135
Carg05236	CsGy6G027210	Cucumber (Gy14) v2	carcgybB0799
Carg05236	MELO3C007526.2	Melon (DHL92) v3.6.1	carmedB0818
Carg05236	CsaV3_6G042870	Cucumber (Chinese Long) v3	carcucB0849
Carg05236	Cla97C01G015570	Watermelon (97103) v2	carwmbB0839
Carg05236	Bhi03G001480	Wax gourd	carwgoB0944

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05236	Carg00866	Silver-seed gourd	carcarB428

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05236	Silver-seed gourd	carcarB225
Carg05236	Cucumber (Gy14) v2	carcgybB0792
Carg05236	Cucumber (Gy14) v2	carcgybB0793
Carg05236	Cucumber (Gy14) v2	carcgybB0800
Carg05236	Cucumber (Gy14) v1	carcgyB0920
Carg05236	Cucumber (Gy14) v1	carcgyB0921
Carg05236	Cucumber (Gy14) v1	carcgyB0924
Carg05236	Cucurbita maxima (Rimu)	carcmaB1118
Carg05236	Cucurbita maxima (Rimu)	carcmaB1127
Carg05236	Cucurbita moschata (Rifu)	carcmoB1089
Carg05236	Cucurbita moschata (Rifu)	carcmoB1097
Carg05236	Cucurbita pepo (Zucchini)	carcpeB1129
Carg05236	Cucurbita pepo (Zucchini)	carcpeB1130
Carg05236	Cucurbita pepo (Zucchini)	carcpeB1136
Carg05236	Cucurbita pepo (Zucchini)	carcpeB1140
Carg05236	Wild cucumber (PI 183967)	carcpiB0839
Carg05236	Wild cucumber (PI 183967)	carcpiB0849
Carg05236	Cucumber (Chinese Long) v2	carcuB0819
Carg05236	Cucumber (Chinese Long) v2	carcuB0827
Carg05236	Cucumber (Chinese Long) v3	carcucB0842
Carg05236	Cucumber (Chinese Long) v3	carcucB0843
Carg05236	Bottle gourd (USVL1VR-Ls)	carlsiB738
Carg05236	Bottle gourd (USVL1VR-Ls)	carlsiB746
Carg05236	Melon (DHL92) v3.5.1	carmeB0802
Carg05236	Melon (DHL92) v3.6.1	carmedB0814
Carg05236	Watermelon (Charleston Gray)	carwcgB0786
Carg05236	Watermelon (Charleston Gray)	carwcgB0790
Carg05236	Watermelon (97103) v1	carwmB0802
Carg05236	Watermelon (97103) v1	carwmB0812
Carg05236	Watermelon (97103) v2	carwmbB0846
Carg05236	Watermelon (97103) v2	carwmbB0850
Carg05236	Wax gourd	carwgoB0941