Carg05142 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05142
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein
Location	Cucurbita_argyrosperma_scaffold_010 : 88573 .. 89787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCATGGCCTCAAACCCTGTTCTTCGTCTTCTTCACAACAAGAAGCTCAATCATCAAGAACAAACTCACCAAATGGATGATCTTCCTCACGATGTTCTTCTCAGCATCCTTTCTCGCCTACCCATTTCATCTCTGATTCAGTTCAGATACGTTTGCAGGTCATGGCGGCTTTTAGCTCAACACCCACAAGTTCTTGACCTGCACAACTCTGTCGATGATCATCATAACTTTCGTTGCTTAATCTTCCACTGTGATTACCCCATCAGAAATCAGCTCTATTTCGTTGATTTACCTGATTTCAGAGACGAGAAATTGTCAGTGAAGAGGATTTTCACTCCTTTTTCAGCTACAATGTCAGAGTACGATGTGGTCGGTTCATGTCATGGCTTCCTCTGTTTATCTGATTCTCTTTACAATGACAAGCTCTTTATTTACAACCCCTTTACTAGAGATTACTTAGAACTCCCCAAAACCAAGGAATTTTCGAACCCGGATGTGGTTTGTGGCGTTGGATTTCATCCACAAACTAAACAGTTCAAAGTGCTTACCATTGTTTATGCCAGAGGCTTTCGCCGTATACAGAGACGCTTTAGCCACTCTGAAGTTCAAATTTTCACATTGGGAAGTTCCAATTGGAGAAGCATCGGCAAACTTTACCACCATCTAGCTCAAGGGCAGCCTCAAGCCGTCGTCAATGGCAGACTCCACTGGGTTTCTCTGCCTCCACGACACCATCTTGGTCGCGCCATTGTCTCATTTGACTTAGAAACAGAGCAATTCATTGACATCCCCAAGCCGGATTTGGGCAGCTTAAGTCGAAACAATTACCATTTAGTGATTCTAAATGGCTGTCTCTCTGCTGCTGTCTACTGCACTTACGGCAAAATGGAGATTTGGGTCATGAAAGAGTATGGCGTGAAGGAATCTTGGGTTAAAAGTTTCAACATTGGAACATACATGCCAAAAGCACTTAAACAAGAAGCAGAGATACCGTTTAAGGTGTCGAAGATCGTGCTTCGAGGCAGAATTGTGAGGGTTCTCTGCATTTTGAAAAGCGGAGAGATTTTGTTGGAGTATAGAAACAGAGCTCTGGTTCTTTTCCATCCAAATACTGGGAAATTCAAGGATGTTGCTTTTGAAGGCATGCCCCATTGGTTTCAAACTGTTGTTCATTTCGGAAGCTTGAATCGGATCGATACTATGTTCTGA

mRNA sequence

ATGTCGATCATGGCCTCAAACCCTGTTCTTCGTCTTCTTCACAACAAGAAGCTCAATCATCAAGAACAAACTCACCAAATGGATGATCTTCCTCACGATGTTCTTCTCAGCATCCTTTCTCGCCTACCCATTTCATCTCTGATTCAGTTCAGATACGTTTGCAGGTCATGGCGGCTTTTAGCTCAACACCCACAAGTTCTTGACCTGCACAACTCTGTCGATGATCATCATAACTTTCGTTGCTTAATCTTCCACTGTGATTACCCCATCAGAAATCAGCTCTATTTCGTTGATTTACCTGATTTCAGAGACGAGAAATTGTCAGTGAAGAGGATTTTCACTCCTTTTTCAGCTACAATGTCAGAGTACGATGTGGTCGGTTCATGTCATGGCTTCCTCTGTTTATCTGATTCTCTTTACAATGACAAGCTCTTTATTTACAACCCCTTTACTAGAGATTACTTAGAACTCCCCAAAACCAAGGAATTTTCGAACCCGGATGTGGTTTGTGGCGTTGGATTTCATCCACAAACTAAACAGTTCAAAGTGCTTACCATTGTTTATGCCAGAGGCTTTCGCCGTATACAGAGACGCTTTAGCCACTCTGAAGTTCAAATTTTCACATTGGGAAGTTCCAATTGGAGAAGCATCGGCAAACTTTACCACCATCTAGCTCAAGGGCAGCCTCAAGCCGTCGTCAATGGCAGACTCCACTGGGTTTCTCTGCCTCCACGACACCATCTTGGTCGCGCCATTGTCTCATTTGACTTAGAAACAGAGCAATTCATTGACATCCCCAAGCCGGATTTGGGCAGCTTAAGTCGAAACAATTACCATTTAGTGATTCTAAATGGCTGTCTCTCTGCTGCTGTCTACTGCACTTACGGCAAAATGGAGATTTGGGTCATGAAAGAGTATGGCGTGAAGGAATCTTGGGTTAAAAGTTTCAACATTGGAACATACATGCCAAAAGCACTTAAACAAGAAGCAGAGATACCGTTTAAGGTGTCGAAGATCGTGCTTCGAGGCAGAATTGTGAGGGTTCTCTGCATTTTGAAAAGCGGAGAGATTTTGTTGGAGTATAGAAACAGAGCTCTGGTTCTTTTCCATCCAAATACTGGGAAATTCAAGGATGTTGCTTTTGAAGGCATGCCCCATTGGTTTCAAACTGTTGTTCATTTCGGAAGCTTGAATCGGATCGATACTATGTTCTGA

Coding sequence (CDS)

ATGTCGATCATGGCCTCAAACCCTGTTCTTCGTCTTCTTCACAACAAGAAGCTCAATCATCAAGAACAAACTCACCAAATGGATGATCTTCCTCACGATGTTCTTCTCAGCATCCTTTCTCGCCTACCCATTTCATCTCTGATTCAGTTCAGATACGTTTGCAGGTCATGGCGGCTTTTAGCTCAACACCCACAAGTTCTTGACCTGCACAACTCTGTCGATGATCATCATAACTTTCGTTGCTTAATCTTCCACTGTGATTACCCCATCAGAAATCAGCTCTATTTCGTTGATTTACCTGATTTCAGAGACGAGAAATTGTCAGTGAAGAGGATTTTCACTCCTTTTTCAGCTACAATGTCAGAGTACGATGTGGTCGGTTCATGTCATGGCTTCCTCTGTTTATCTGATTCTCTTTACAATGACAAGCTCTTTATTTACAACCCCTTTACTAGAGATTACTTAGAACTCCCCAAAACCAAGGAATTTTCGAACCCGGATGTGGTTTGTGGCGTTGGATTTCATCCACAAACTAAACAGTTCAAAGTGCTTACCATTGTTTATGCCAGAGGCTTTCGCCGTATACAGAGACGCTTTAGCCACTCTGAAGTTCAAATTTTCACATTGGGAAGTTCCAATTGGAGAAGCATCGGCAAACTTTACCACCATCTAGCTCAAGGGCAGCCTCAAGCCGTCGTCAATGGCAGACTCCACTGGGTTTCTCTGCCTCCACGACACCATCTTGGTCGCGCCATTGTCTCATTTGACTTAGAAACAGAGCAATTCATTGACATCCCCAAGCCGGATTTGGGCAGCTTAAGTCGAAACAATTACCATTTAGTGATTCTAAATGGCTGTCTCTCTGCTGCTGTCTACTGCACTTACGGCAAAATGGAGATTTGGGTCATGAAAGAGTATGGCGTGAAGGAATCTTGGGTTAAAAGTTTCAACATTGGAACATACATGCCAAAAGCACTTAAACAAGAAGCAGAGATACCGTTTAAGGTGTCGAAGATCGTGCTTCGAGGCAGAATTGTGAGGGTTCTCTGCATTTTGAAAAGCGGAGAGATTTTGTTGGAGTATAGAAACAGAGCTCTGGTTCTTTTCCATCCAAATACTGGGAAATTCAAGGATGTTGCTTTTGAAGGCATGCCCCATTGGTTTCAAACTGTTGTTCATTTCGGAAGCTTGAATCGGATCGATACTATGTTCTGA

Protein sequence

MSIMASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF

Homology

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BLAST of Carg05142 vs. NCBI nr
Match: XP_023534338.1 (F-box protein At3g07870-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 837.4 bits (2162), Expect = 2.0e-239
Identity = 401/404 (99.26%), Postives = 402/404 (99.50%), Query Frame = 0


Query: 1   MSIMASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60
           MSIM SNPVLRLLHNKKLN QEQTHQMD+LPHDVLLSILSRLPISSLIQFRYVCRSWRLL
Sbjct: 1   MSIMPSNPVLRLLHNKKLNRQEQTHQMDNLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60

Query: 61  AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM 120
           AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM
Sbjct: 61  AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM 120

Query: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ 180
           SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ
Sbjct: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ 180

Query: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240
           FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV
Sbjct: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240

Query: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300
           SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI
Sbjct: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300

Query: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE 360
           WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE
Sbjct: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE 360

Query: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 405
           YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF
Sbjct: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 404

[Close]

BLAST of Carg05142 vs. NCBI nr
Match: XP_022948038.1 (F-box protein At3g07870-like [Cucurbita moschata])

HSP 1 Score: 834.3 bits (2154), Expect = 1.7e-238
Identity = 399/404 (98.76%), Postives = 402/404 (99.50%), Query Frame = 0


Query: 1   MSIMASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60
           MSIMASNPVLRLLHNKKLN Q+Q HQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL
Sbjct: 1   MSIMASNPVLRLLHNKKLNLQQQPHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60

Query: 61  AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM 120
           AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRD+KLSVKRIFTPFSATM
Sbjct: 61  AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDDKLSVKRIFTPFSATM 120

Query: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ 180
           SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYL+LPKTKEFSNPDVVCGVGFHPQTKQ
Sbjct: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLQLPKTKEFSNPDVVCGVGFHPQTKQ 180

Query: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240
           FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV
Sbjct: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240

Query: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300
           SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI
Sbjct: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300

Query: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE 360
           WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE
Sbjct: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE 360

Query: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 405
           YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF
Sbjct: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 404

[Close]

BLAST of Carg05142 vs. NCBI nr
Match: XP_022971028.1 (F-box protein At3g07870 [Cucurbita maxima])

HSP 1 Score: 825.5 bits (2131), Expect = 8.0e-236
Identity = 397/404 (98.27%), Postives = 401/404 (99.26%), Query Frame = 0


Query: 1   MSIMASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60
           MSIMASNPVLR LHNK+LN QEQ+HQMD+LPHDVLLSILSRLPISSLIQFRYVCRSWRLL
Sbjct: 1   MSIMASNPVLR-LHNKRLNLQEQSHQMDNLPHDVLLSILSRLPISSLIQFRYVCRSWRLL 60

Query: 61  AQHPQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM 120
           AQHPQVLDLHNSV DHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM
Sbjct: 61  AQHPQVLDLHNSVHDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATM 120

Query: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ 180
           SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ
Sbjct: 121 SEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQ 180

Query: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240
           FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV
Sbjct: 181 FKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWV 240

Query: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300
           SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI
Sbjct: 241 SLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEI 300

Query: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLE 360
           WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILK+GEILLE
Sbjct: 301 WVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKTGEILLE 360

Query: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 405
           YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF
Sbjct: 361 YRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTMF 403

[Close]

BLAST of Carg05142 vs. NCBI nr
Match: XP_022140713.1 (F-box protein At3g07870 [Momordica charantia])

HSP 1 Score: 660.6 bits (1703), Expect = 3.4e-186
Identity = 320/405 (79.01%), Postives = 350/405 (86.42%), Query Frame = 0


Query: 4   MASNPVLRLLHNKKLNHQ-EQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQ 63
           MAS+     L NKK  H+ +Q+HQMD LPHD+LL ILSRLP SSL+QFRYVCRSWRLLAQ
Sbjct: 1   MASHCSQFHLQNKKPKHKHQQSHQMDHLPHDILLHILSRLPFSSLVQFRYVCRSWRLLAQ 60

Query: 64  HPQVLDLH---NSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSAT 123
           HPQ+L  H      D   NFRCLIFHCDYPIRN LYFVD P FR +K  VKR+FTPFSA 
Sbjct: 61  HPQLLHFHTPPRDEDQDDNFRCLIFHCDYPIRNHLYFVDFPAFRHDKEPVKRVFTPFSAA 120

Query: 124 MSEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTK 183
           M EYDVVGSC+G LCLSDSLYNDKLFIYNPFTRDYLELPKTKEF NPDVVCG+GFHPQTK
Sbjct: 121 MPEYDVVGSCNGLLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFLNPDVVCGIGFHPQTK 180

Query: 184 QFKVLTIVYARGFRRIQRRFS-HSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLH 243
           QFKVL IVY+RGFRRI+R  S HSEVQIFTLG+SNWRSIGK+ HHLAQGQ QAVVNGRLH
Sbjct: 181 QFKVLKIVYSRGFRRIKRYSSHHSEVQIFTLGTSNWRSIGKICHHLAQGQSQAVVNGRLH 240

Query: 244 WVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKM 303
           WVSLP R+HLGR++VSFDL  EQF +IPKP+ GSLSR NYHLVIL+GCLSAA YC+YGKM
Sbjct: 241 WVSLPRRYHLGRSLVSFDLADEQFREIPKPEFGSLSRCNYHLVILDGCLSAAAYCSYGKM 300

Query: 304 EIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEIL 363
           EIWVMKEYGV ESWVK FNIG YMPKALKQEAE  F+VSKIVLRGR VRVLCILKSGEIL
Sbjct: 301 EIWVMKEYGVXESWVKRFNIGAYMPKALKQEAEESFRVSKIVLRGRFVRVLCILKSGEIL 360

Query: 364 LEYRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTM 404
           LEYRNRALV+F PNTGKF+DV F+GMP+WFQTVVHFGSL+R+D +
Sbjct: 361 LEYRNRALVVFQPNTGKFRDVTFQGMPNWFQTVVHFGSLSRMDAL 405

[Close]

BLAST of Carg05142 vs. NCBI nr
Match: XP_008455966.1 (PREDICTED: F-box protein At3g07870 [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 304/401 (75.81%), Postives = 345/401 (86.03%), Query Frame = 0


Query: 4   MASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQH 63
           M SN V  LLHNKK N  + +HQMD+LPHDVL  ILSRLPISSLIQF  VCRSWR LAQ+
Sbjct: 1   MPSNSVF-LLHNKKPNLSQNSHQMDNLPHDVLFQILSRLPISSLIQFHSVCRSWRFLAQY 60

Query: 64  PQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEY 123
            Q  D       H NFRCLIFH D+PIRN LYFVD P     K SVKRIFTPF+ATM EY
Sbjct: 61  TQHFD-----HKHDNFRCLIFHSDFPIRNHLYFVDFPSLTQHKFSVKRIFTPFAATMPEY 120

Query: 124 DVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKV 183
           DVVGSC+GFLCLSDSLYN+KLFIYNPFTRDYLELPK+KEF NPDVV G+GFHPQTK  K+
Sbjct: 121 DVVGSCNGFLCLSDSLYNEKLFIYNPFTRDYLELPKSKEFPNPDVVYGIGFHPQTKHLKI 180

Query: 184 LTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLP 243
           L IVY++GFRRIQRRF HSEVQ+FTLGSSNWRSIG+++HHLAQGQ  A +NGRLHWVSLP
Sbjct: 181 LKIVYSKGFRRIQRRFHHSEVQVFTLGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLP 240

Query: 244 PRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVM 303
            RH+LGR IVSFDL +E+FIDIPKPD GSLSR N+ L+ILN CLSA VYC+YGKMEIWVM
Sbjct: 241 RRHYLGRTIVSFDLASEEFIDIPKPDYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVM 300

Query: 304 KEYGVKESWVKSFNIGTYMPKALKQE-AEIPFKVSKIVLRGRIVRVLCILKSGEILLEYR 363
           ++YGVK+SWVKSFNIG+YMPK LKQE  E+ FKVSKIV++GRIVRV+C+LKSGEILLEYR
Sbjct: 301 EQYGVKDSWVKSFNIGSYMPKGLKQEGTEMCFKVSKIVVKGRIVRVVCVLKSGEILLEYR 360

Query: 364 NRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTM 404
           NRALV+F+P++GKFKDV+FEGMP+WFQT+VHFGSLNRID +
Sbjct: 361 NRALVVFNPSSGKFKDVSFEGMPNWFQTIVHFGSLNRIDAL 395

[Close]

BLAST of Carg05142 vs. TAIR10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 392.9 bits (1008), Expect = 2.4e-109
Identity = 196/393 (49.87%), Postives = 269/393 (68.45%), Query Frame = 0


Query: 27  MDDLPHDVLLSILSRLPISSLIQFRYVCRSWR-LLAQHPQVLDLHNSVDDHHNFRCLIFH 86
           ++ LP D++  I SRLPISS+ +  +VCRSWR +L QH ++    +S        CL+ H
Sbjct: 25  LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRL----SSSSSSPTKPCLLLH 84

Query: 87  CDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLF 146
           CD PIRN L+F+DL +  ++++  K+    F+++M E+DVVGSC+G LCLSDSLYND L+
Sbjct: 85  CDSPIRNGLHFLDLSE-EEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLY 144

Query: 147 IYNPFTRDYLELPK-TKEFSNPDVVCGVGFHPQTKQFKVLTIVYARG--------FR-RI 206
           +YNPFT + LELP+ + ++ + ++V G GFH  TK++KVL IVY RG        +R R 
Sbjct: 145 LYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRG 204

Query: 207 QRRFSHSEVQIFTLGSS------NWRSIGKLYHHLAQGQPQAVVNGRLHWVSLPPRHHLG 266
           + ++  SEVQI TL S       +WRS+GK  +   +   +A+VNGRLH+V+ P RH   
Sbjct: 205 RIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPD 264

Query: 267 RAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVK 326
           R  VSFDLE E+F +IPKPD G L+R N+ LV L GCL A VY  YGK++IWVMK YGVK
Sbjct: 265 RKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVK 324

Query: 327 ESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLF 386
           ESW K ++IGTY+PK LKQ  + P  + K    G++VRVLC+L++GEILLEY++R LV +
Sbjct: 325 ESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAY 384

Query: 387 HPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDT 403
            P  GKFKD+ F G+P+WF TVVH G+L+  DT
Sbjct: 385 DPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDT 412

[Close]

BLAST of Carg05142 vs. TAIR10
Match: AT3G06240.1 (F-box family protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 98/400 (24.50%), Postives = 170/400 (42.50%), Query Frame = 0


Query: 30  LPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLH---------------NSVD 89
           LP +++  IL RLP  S+ +FR V + +  L+  P    +H                 + 
Sbjct: 36  LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95

Query: 90  DHHNFRCLIFHC-------------DYPIRN--QLYFVDLPDF-RDEKLSVKRIFTPFSA 149
             HN   L F+              +YP+++   ++   + ++  D     +R+    +A
Sbjct: 96  SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155

Query: 150 ---TMSEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLEL-----PKTKEFSNPDV-V 209
                +  ++VGS +G +C+S       +F+YNP T D   L     PK+ E+   +   
Sbjct: 156 KSYRRNWVEIVGSSNGLVCISPG--EGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQT 215

Query: 210 CGVGFHPQTKQFKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQP 269
            G GF   T  +K++ +V               +  +++L + +WR I  L +    G  
Sbjct: 216 YGFGFDGLTDDYKLVKLVATSE--------DILDASVYSLKADSWRRICNLNYEHNDGSY 275

Query: 270 QAVV--NGRLHWVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLG---SLSRNNYHLVILN 329
            + V  NG +HWV    RH+  R +V+FD++TE+F ++P PD     S   +N+ +  LN
Sbjct: 276 TSGVHFNGAIHWVFTESRHN-QRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLN 335

Query: 330 GCLSAAVYCTYGKMEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGR 385
           G L     C     +IWVM EYG  +SW +                       +I L  R
Sbjct: 336 GRLCVVNSCYDVHDDIWVMSEYGEAKSWSR----------------------IRINLLYR 395

[Close]

BLAST of Carg05142 vs. TAIR10
Match: AT3G23880.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 91/381 (23.88%), Postives = 156/381 (40.94%), Query Frame = 0


Query: 22  EQTHQM---DDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL-------AQHPQVLDLHN 81
           E T +M    +LP +++  IL RLP+ SL +F+ VC SWR L        +H  +L+   
Sbjct: 3   ETTREMFSPHNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSK 62

Query: 82  SVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYD------- 141
           +     +   +I    Y +++                +  ++   +  +SE+D       
Sbjct: 63  ATTSTKSPYGVITTSRYHLKS--------------CCIHSLYNASTVYVSEHDGELLGRD 122

Query: 142 ---VVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPD---VVCGVGFHPQT 201
              VVG+CHG +C     Y+  L+++NP  +    L  +   ++ D   V  G G+    
Sbjct: 123 YYQVVGTCHGLVCFHVD-YDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESE 182

Query: 202 KQFKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLA---QGQPQAVVNG 261
             +KV+ ++        QR     E +I++     WRS       +    + +    +NG
Sbjct: 183 DDYKVVALLQ-------QRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYING 242

Query: 262 RLHWVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTY 321
            L+W +          I+S+D+  ++F ++P P           L  L GCLS   YC  
Sbjct: 243 TLNWAATSSSS--SWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKG 302

Query: 322 GKMEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSG 377
              ++WVMKE+G   SW K  +I                           VR L I    
Sbjct: 303 ANADVWVMKEFGEVYSWSKLLSIPGLTD---------------------FVRPLWISDGL 337

[Close]

BLAST of Carg05142 vs. TAIR10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-21
Identity = 107/401 (26.68%), Postives = 176/401 (43.89%), Query Frame = 0


Query: 27  MDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLD--LHNSVDDHHNFRCLIF 86
           M  +P D++  I  RLP  +L++ R + +    L   P  ++  LH  +    +   L+ 
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 87  HCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKL 146
                   +LY VDL    D   SV  +  P        +V GS +G + LS+S     L
Sbjct: 61  GA-----LRLYSVDL----DSLDSVSDVEHPMKRG-GPTEVFGSSNGLIGLSNS--PTDL 120

Query: 147 FIYNPFTRDYLELPKTKEFSNPD-------VVCGVGFHPQTKQFKVLTIVYARGFRRIQR 206
            ++NP TR    LP +     PD       V  G+G+   +  +KV+ +V  +     + 
Sbjct: 121 AVFNPSTRQIHRLPPS-SIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDEL 180

Query: 207 RFSHS-EVQIFTLGSSNWRSIGKL----------YHHLAQGQPQAVVNGR-LHWVSLPPR 266
             S   EV++F+L  ++W+ I  +          Y+HL   +   V+ G  LHWV LP R
Sbjct: 181 GCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV-LPRR 240

Query: 267 HHL--GRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLV----ILNGCLSAAVYCTYGK-- 326
             L     IV FDL  E+F  +  P+  +++  N  +     +L+GCL   + C Y +  
Sbjct: 241 PGLIAFNLIVRFDLALEEFEIVRFPE--AVANGNVDIQMDIGVLDGCL--CLMCNYDQSY 300

Query: 327 MEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEI-PFKVSKIVLRGRIVRVLCILKSGE 386
           +++W+MKEY V++SW K F +    PK++K  + + P   SK                 +
Sbjct: 301 VDVWMMKEYNVRDSWTKVFTV--QKPKSVKSFSYMRPLVYSK--------------DKKK 360

Query: 387 ILLEYRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSL 398
           +LLE  N  LV F   + K   +  +  P  +   +   SL
Sbjct: 361 VLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSL 367

[Close]

BLAST of Carg05142 vs. TAIR10
Match: AT5G49610.1 (F-box family protein)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17
Identity = 90/382 (23.56%), Postives = 157/382 (41.10%), Query Frame = 0


Query: 31  PHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNSVDDHHNFRCLIFHCDYPI 90
           P +V+L IL+RLP+ SL +F+ VC+SW  L        L N +                +
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLS---------------V 69

Query: 91  RNQLYFVDLPDFR-----DEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLF 150
           + QL   ++ D       D    V  +   F        V  S +G LC S        +
Sbjct: 70  KEQLLVAEVSDSSSLICVDNLRGVSELSLDFVRDRVRIRV--SSNGLLCCSSIPEKGVYY 129

Query: 151 IYNPFTRDYLELPKTKEFS----NPD---VVCGVGFHPQTKQFKVLTIVYARGFRRIQRR 210
           + NP TR+Y +LPK++E       PD    + G+       +F V+   Y R F   QR 
Sbjct: 130 VCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFG--QRP 189

Query: 211 FSHSEVQIFTLGSSNWRSIGKL-----YHHLAQGQPQAVVNGRLHWVSLPPRHHLGRAIV 270
                  +F   S+ WR    +     + H+++ Q    VNG LHW+     +     I+
Sbjct: 190 DGSFICLVFDSESNKWRKFVSVLEECSFTHMSKNQ-VVFVNGMLHWLMSGLCY-----IL 249

Query: 271 SFDLETEQFIDIPKPD---LGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVKE 330
           + D+E + +  I  PD   +G+   N  +L+  +G LS  +  +   M+IW M EY   E
Sbjct: 250 ALDVEHDVWRKISLPDEIRIGNGGGNRVYLLESDGFLS-VIQLSDVWMKIWKMSEYET-E 309

Query: 331 SWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLFH 389
           +W                   +   +S   ++G +  +  I ++GE +    ++ ++++ 
Sbjct: 310 TW------------------SVVDSISLRCIKGLVPGIFPICQTGEYVFLATHKQVLVYQ 346

[Close]

BLAST of Carg05142 vs. Swiss-Prot
Match: sp|Q9SFC7|FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.3e-108
Identity = 196/393 (49.87%), Postives = 269/393 (68.45%), Query Frame = 0


Query: 27  MDDLPHDVLLSILSRLPISSLIQFRYVCRSWR-LLAQHPQVLDLHNSVDDHHNFRCLIFH 86
           ++ LP D++  I SRLPISS+ +  +VCRSWR +L QH ++    +S        CL+ H
Sbjct: 25  LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRL----SSSSSSPTKPCLLLH 84

Query: 87  CDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLF 146
           CD PIRN L+F+DL +  ++++  K+    F+++M E+DVVGSC+G LCLSDSLYND L+
Sbjct: 85  CDSPIRNGLHFLDLSE-EEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLY 144

Query: 147 IYNPFTRDYLELPK-TKEFSNPDVVCGVGFHPQTKQFKVLTIVYARG--------FR-RI 206
           +YNPFT + LELP+ + ++ + ++V G GFH  TK++KVL IVY RG        +R R 
Sbjct: 145 LYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRG 204

Query: 207 QRRFSHSEVQIFTLGSS------NWRSIGKLYHHLAQGQPQAVVNGRLHWVSLPPRHHLG 266
           + ++  SEVQI TL S       +WRS+GK  +   +   +A+VNGRLH+V+ P RH   
Sbjct: 205 RIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPD 264

Query: 267 RAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVK 326
           R  VSFDLE E+F +IPKPD G L+R N+ LV L GCL A VY  YGK++IWVMK YGVK
Sbjct: 265 RKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVK 324

Query: 327 ESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLF 386
           ESW K ++IGTY+PK LKQ  + P  + K    G++VRVLC+L++GEILLEY++R LV +
Sbjct: 325 ESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAY 384

Query: 387 HPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDT 403
            P  GKFKD+ F G+P+WF TVVH G+L+  DT
Sbjct: 385 DPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDT 412

[Close]

BLAST of Carg05142 vs. Swiss-Prot
Match: sp|Q8GXC7|FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-20
Identity = 98/400 (24.50%), Postives = 170/400 (42.50%), Query Frame = 0


Query: 30  LPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLH---------------NSVD 89
           LP +++  IL RLP  S+ +FR V + +  L+  P    +H                 + 
Sbjct: 36  LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95

Query: 90  DHHNFRCLIFHC-------------DYPIRN--QLYFVDLPDF-RDEKLSVKRIFTPFSA 149
             HN   L F+              +YP+++   ++   + ++  D     +R+    +A
Sbjct: 96  SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155

Query: 150 ---TMSEYDVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLEL-----PKTKEFSNPDV-V 209
                +  ++VGS +G +C+S       +F+YNP T D   L     PK+ E+   +   
Sbjct: 156 KSYRRNWVEIVGSSNGLVCISPG--EGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQT 215

Query: 210 CGVGFHPQTKQFKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQP 269
            G GF   T  +K++ +V               +  +++L + +WR I  L +    G  
Sbjct: 216 YGFGFDGLTDDYKLVKLVATSE--------DILDASVYSLKADSWRRICNLNYEHNDGSY 275

Query: 270 QAVV--NGRLHWVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLG---SLSRNNYHLVILN 329
            + V  NG +HWV    RH+  R +V+FD++TE+F ++P PD     S   +N+ +  LN
Sbjct: 276 TSGVHFNGAIHWVFTESRHN-QRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLN 335

Query: 330 GCLSAAVYCTYGKMEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGR 385
           G L     C     +IWVM EYG  +SW +                       +I L  R
Sbjct: 336 GRLCVVNSCYDVHDDIWVMSEYGEAKSWSR----------------------IRINLLYR 395

[Close]

BLAST of Carg05142 vs. Swiss-Prot
Match: sp|Q9LIR8|FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-20
Identity = 91/381 (23.88%), Postives = 156/381 (40.94%), Query Frame = 0


Query: 22  EQTHQM---DDLPHDVLLSILSRLPISSLIQFRYVCRSWRLL-------AQHPQVLDLHN 81
           E T +M    +LP +++  IL RLP+ SL +F+ VC SWR L        +H  +L+   
Sbjct: 3   ETTREMFSPHNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSK 62

Query: 82  SVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYD------- 141
           +     +   +I    Y +++                +  ++   +  +SE+D       
Sbjct: 63  ATTSTKSPYGVITTSRYHLKS--------------CCIHSLYNASTVYVSEHDGELLGRD 122

Query: 142 ---VVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPD---VVCGVGFHPQT 201
              VVG+CHG +C     Y+  L+++NP  +    L  +   ++ D   V  G G+    
Sbjct: 123 YYQVVGTCHGLVCFHVD-YDKSLYLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESE 182

Query: 202 KQFKVLTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLA---QGQPQAVVNG 261
             +KV+ ++        QR     E +I++     WRS       +    + +    +NG
Sbjct: 183 DDYKVVALLQ-------QRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYING 242

Query: 262 RLHWVSLPPRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTY 321
            L+W +          I+S+D+  ++F ++P P           L  L GCLS   YC  
Sbjct: 243 TLNWAATSSSS--SWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKG 302

Query: 322 GKMEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSG 377
              ++WVMKE+G   SW K  +I                           VR L I    
Sbjct: 303 ANADVWVMKEFGEVYSWSKLLSIPGLTD---------------------FVRPLWISDGL 337

[Close]

BLAST of Carg05142 vs. Swiss-Prot
Match: sp|Q9SU30|CPR1_ARATH (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-19
Identity = 107/401 (26.68%), Postives = 176/401 (43.89%), Query Frame = 0


Query: 27  MDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLD--LHNSVDDHHNFRCLIF 86
           M  +P D++  I  RLP  +L++ R + +    L   P  ++  LH  +    +   L+ 
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 87  HCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKL 146
                   +LY VDL    D   SV  +  P        +V GS +G + LS+S     L
Sbjct: 61  GA-----LRLYSVDL----DSLDSVSDVEHPMKRG-GPTEVFGSSNGLIGLSNS--PTDL 120

Query: 147 FIYNPFTRDYLELPKTKEFSNPD-------VVCGVGFHPQTKQFKVLTIVYARGFRRIQR 206
            ++NP TR    LP +     PD       V  G+G+   +  +KV+ +V  +     + 
Sbjct: 121 AVFNPSTRQIHRLPPS-SIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDEL 180

Query: 207 RFSHS-EVQIFTLGSSNWRSIGKL----------YHHLAQGQPQAVVNGR-LHWVSLPPR 266
             S   EV++F+L  ++W+ I  +          Y+HL   +   V+ G  LHWV LP R
Sbjct: 181 GCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWV-LPRR 240

Query: 267 HHL--GRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLV----ILNGCLSAAVYCTYGK-- 326
             L     IV FDL  E+F  +  P+  +++  N  +     +L+GCL   + C Y +  
Sbjct: 241 PGLIAFNLIVRFDLALEEFEIVRFPE--AVANGNVDIQMDIGVLDGCL--CLMCNYDQSY 300

Query: 327 MEIWVMKEYGVKESWVKSFNIGTYMPKALKQEAEI-PFKVSKIVLRGRIVRVLCILKSGE 386
           +++W+MKEY V++SW K F +    PK++K  + + P   SK                 +
Sbjct: 301 VDVWMMKEYNVRDSWTKVFTV--QKPKSVKSFSYMRPLVYSK--------------DKKK 360

Query: 387 ILLEYRNRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSL 398
           +LLE  N  LV F   + K   +  +  P  +   +   SL
Sbjct: 361 VLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSL 367

[Close]

BLAST of Carg05142 vs. Swiss-Prot
Match: sp|Q9FGY4|FB341_ARATH (F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.9e-16
Identity = 90/382 (23.56%), Postives = 157/382 (41.10%), Query Frame = 0


Query: 31  PHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNSVDDHHNFRCLIFHCDYPI 90
           P +V+L IL+RLP+ SL +F+ VC+SW  L        L N +                +
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLS---------------V 69

Query: 91  RNQLYFVDLPDFR-----DEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLF 150
           + QL   ++ D       D    V  +   F        V  S +G LC S        +
Sbjct: 70  KEQLLVAEVSDSSSLICVDNLRGVSELSLDFVRDRVRIRV--SSNGLLCCSSIPEKGVYY 129

Query: 151 IYNPFTRDYLELPKTKEFS----NPD---VVCGVGFHPQTKQFKVLTIVYARGFRRIQRR 210
           + NP TR+Y +LPK++E       PD    + G+       +F V+   Y R F   QR 
Sbjct: 130 VCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFG--QRP 189

Query: 211 FSHSEVQIFTLGSSNWRSIGKL-----YHHLAQGQPQAVVNGRLHWVSLPPRHHLGRAIV 270
                  +F   S+ WR    +     + H+++ Q    VNG LHW+     +     I+
Sbjct: 190 DGSFICLVFDSESNKWRKFVSVLEECSFTHMSKNQ-VVFVNGMLHWLMSGLCY-----IL 249

Query: 271 SFDLETEQFIDIPKPD---LGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVKE 330
           + D+E + +  I  PD   +G+   N  +L+  +G LS  +  +   M+IW M EY   E
Sbjct: 250 ALDVEHDVWRKISLPDEIRIGNGGGNRVYLLESDGFLS-VIQLSDVWMKIWKMSEYET-E 309

Query: 331 SWVKSFNIGTYMPKALKQEAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLFH 389
           +W                   +   +S   ++G +  +  I ++GE +    ++ ++++ 
Sbjct: 310 TW------------------SVVDSISLRCIKGLVPGIFPICQTGEYVFLATHKQVLVYQ 346

[Close]

BLAST of Carg05142 vs. TrEMBL
Match: tr|A0A1S3C1Q1|A0A1S3C1Q1_CUCME (F-box protein At3g07870 OS=Cucumis melo OX=3656 GN=LOC103496029 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 7.0e-180
Identity = 304/401 (75.81%), Postives = 345/401 (86.03%), Query Frame = 0


Query: 4   MASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQH 63
           M SN V  LLHNKK N  + +HQMD+LPHDVL  ILSRLPISSLIQF  VCRSWR LAQ+
Sbjct: 1   MPSNSVF-LLHNKKPNLSQNSHQMDNLPHDVLFQILSRLPISSLIQFHSVCRSWRFLAQY 60

Query: 64  PQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEY 123
            Q  D       H NFRCLIFH D+PIRN LYFVD P     K SVKRIFTPF+ATM EY
Sbjct: 61  TQHFD-----HKHDNFRCLIFHSDFPIRNHLYFVDFPSLTQHKFSVKRIFTPFAATMPEY 120

Query: 124 DVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKV 183
           DVVGSC+GFLCLSDSLYN+KLFIYNPFTRDYLELPK+KEF NPDVV G+GFHPQTK  K+
Sbjct: 121 DVVGSCNGFLCLSDSLYNEKLFIYNPFTRDYLELPKSKEFPNPDVVYGIGFHPQTKHLKI 180

Query: 184 LTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLP 243
           L IVY++GFRRIQRRF HSEVQ+FTLGSSNWRSIG+++HHLAQGQ  A +NGRLHWVSLP
Sbjct: 181 LKIVYSKGFRRIQRRFHHSEVQVFTLGSSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLP 240

Query: 244 PRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVM 303
            RH+LGR IVSFDL +E+FIDIPKPD GSLSR N+ L+ILN CLSA VYC+YGKMEIWVM
Sbjct: 241 RRHYLGRTIVSFDLASEEFIDIPKPDYGSLSRCNFQLMILNDCLSAVVYCSYGKMEIWVM 300

Query: 304 KEYGVKESWVKSFNIGTYMPKALKQE-AEIPFKVSKIVLRGRIVRVLCILKSGEILLEYR 363
           ++YGVK+SWVKSFNIG+YMPK LKQE  E+ FKVSKIV++GRIVRV+C+LKSGEILLEYR
Sbjct: 301 EQYGVKDSWVKSFNIGSYMPKGLKQEGTEMCFKVSKIVVKGRIVRVVCVLKSGEILLEYR 360

Query: 364 NRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTM 404
           NRALV+F+P++GKFKDV+FEGMP+WFQT+VHFGSLNRID +
Sbjct: 361 NRALVVFNPSSGKFKDVSFEGMPNWFQTIVHFGSLNRIDAL 395

[Close]

BLAST of Carg05142 vs. TrEMBL
Match: tr|A0A0A0KA51|A0A0A0KA51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109800 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 2.8e-176
Identity = 299/401 (74.56%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 4   MASNPVLRLLHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQH 63
           M SN V  LLHNKK N  + +HQMD+LPHDVL  ILSRLPISSLIQF  V RS RLLAQ+
Sbjct: 1   MPSNSVF-LLHNKKPNLPQNSHQMDNLPHDVLFQILSRLPISSLIQFHSVSRSCRLLAQY 60

Query: 64  PQVLDLHNSVDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEY 123
            Q+ D      +H +FRCLIFH D+PIRN LYFVD P     K SVKRIFTPF+ATM EY
Sbjct: 61  TQLFD-----PNHDHFRCLIFHSDFPIRNHLYFVDFPSLTQHKFSVKRIFTPFAATMPEY 120

Query: 124 DVVGSCHGFLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKV 183
           DVVGSC+GFLCLSDSLYN+ LFIYNPFTRDYLELPK+K+FSNPDVV G+GFHPQTK+ K+
Sbjct: 121 DVVGSCNGFLCLSDSLYNENLFIYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQTKRLKI 180

Query: 184 LTIVYARGFRRIQRRFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLP 243
           L IVY++GFRRIQRRF HSEVQ+FTLG+SNWRSIG+++HHLAQGQ  A +NGRLHWVSLP
Sbjct: 181 LKIVYSKGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLP 240

Query: 244 PRHHLGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVM 303
            RH++GR IVSFDL +E+FIDIPKPD GSLSR N+ L+ LN CLSA VYC+YGKMEIWVM
Sbjct: 241 RRHYVGRTIVSFDLASEEFIDIPKPDYGSLSRCNFQLMNLNDCLSAVVYCSYGKMEIWVM 300

Query: 304 KEYGVKESWVKSFNIGTYMPKALKQE-AEIPFKVSKIVLRGRIVRVLCILKSGEILLEYR 363
           ++YGVKESWVKSFNIG+YMPK LKQE  E+ FKVSKIV++GRIVRV+C+LKSGEILLEYR
Sbjct: 301 EQYGVKESWVKSFNIGSYMPKGLKQEGTEMCFKVSKIVVKGRIVRVVCVLKSGEILLEYR 360

Query: 364 NRALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTM 404
           NRALV+F+P++GKFKDV+FEGMP+WFQT+VHFGSLNRID +
Sbjct: 361 NRALVVFNPSSGKFKDVSFEGMPNWFQTIVHFGSLNRIDAL 395

[Close]

BLAST of Carg05142 vs. TrEMBL
Match: tr|W9SM54|W9SM54_9ROSA (F-box protein OS=Morus notabilis OX=981085 GN=L484_020049 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.4e-132
Identity = 236/399 (59.15%), Postives = 307/399 (76.94%), Query Frame = 0


Query: 13  LHNKKLNHQEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNS 72
           + +K+ +  + T +++ LP +++  ILS+LPISSL+QF+YVCR+WR+L Q P ++DL+NS
Sbjct: 12  IKSKQEDDNQSTSRIETLPREIVFDILSKLPISSLVQFKYVCRAWRVLTQDPSLVDLYNS 71

Query: 73  VDDHHNFRCLIFHCDYPIRNQLYFVDL-PDFRDEKLSVKRIFTPFSATMSEYDVVGSCHG 132
             +  N  CL+FHCD+PIRNQLYFVD   D  DEK +VKRI TPF ++M E+DV+GSC+G
Sbjct: 72  RTEEEN-PCLVFHCDFPIRNQLYFVDFQADRDDEKQAVKRIQTPFCSSMPEFDVIGSCNG 131

Query: 133 FLCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKVLTIV-YAR 192
            LCLSDSLYN+ L++YNPFTRDY ELPKT +F N +VV G GFHP+TK++KV+ I+ Y  
Sbjct: 132 LLCLSDSLYNEGLYVYNPFTRDYRELPKTNQFQNREVVFGFGFHPRTKEYKVVKIIYYEN 191

Query: 193 GFRRIQRRF--SHSEVQIFTLGSSNWRSIGKLYHHLAQ-GQPQAVVNGRLHWVSLPPRHH 252
           G+R ++ RF  S SEVQ+FTLGSS WRS+GK+ H L +    Q +V+GRLHWV+ P RH 
Sbjct: 192 GYRGLRNRFRISSSEVQVFTLGSSRWRSLGKVSHDLHKWPTAQVLVHGRLHWVTGPRRHR 251

Query: 253 LGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYG 312
            GR +VSFDL  E+F ++P+PD+  L R  YHL ++ GCLSAA   + GK+EIWVMKEYG
Sbjct: 252 TGRNVVSFDLGDEKFREVPRPDVVGLRRCEYHLFVMRGCLSAAFGFSNGKLEIWVMKEYG 311

Query: 313 VKESWVKSFNIGTYMPKALKQEAEIP-FKVSKIVLRGRIVRVLCILKSGEILLEY--RNR 372
           VKESWVK F I  Y PKA+KQE   P F VSK+  RG+ VRVLC+L+SGEILLEY  ++R
Sbjct: 312 VKESWVKEFVIANYTPKAIKQEVIQPSFCVSKV--RGKSVRVLCVLRSGEILLEYKEKSR 371

Query: 373 ALVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDTM 404
           ALVL +PNT KFKD+ F+GMP+WFQTVVH GSLN+IDT+
Sbjct: 372 ALVLHNPNTRKFKDLMFQGMPNWFQTVVHVGSLNQIDTL 407

[Close]

BLAST of Carg05142 vs. TrEMBL
Match: tr|A0A1R3G4E1|A0A1R3G4E1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_28976 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.7e-131
Identity = 221/383 (57.70%), Postives = 293/383 (76.50%), Query Frame = 0


Query: 27  MDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNSVDDHHNFRCLIFHC 86
           M++LPH++++ ILSRLPI+SL+QF++VCR WR LAQ P + D+H S     N  CLI HC
Sbjct: 45  MENLPHEIIVDILSRLPITSLVQFKFVCRRWRGLAQDPLIADMHLSCKTDTN-PCLILHC 104

Query: 87  DYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGFLCLSDSLYNDKLFI 146
           D+PIRNQLYFVDL     +K  VKR++ PF ATM E+DVVGSC+G LCLSDSLYND L++
Sbjct: 105 DFPIRNQLYFVDLSSHNHDKDKVKRLYAPFQATMPEFDVVGSCNGLLCLSDSLYNDALYV 164

Query: 147 YNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKVLTIVYAR----GFRRIQR-RFSH 206
           YNPFT DY+ELPK+K++ + +VV G GFHP+TK++KV+ IVY R     F R +R  +  
Sbjct: 165 YNPFTMDYMELPKSKQYPDQEVVFGFGFHPKTKEYKVVKIVYYRNTSSSFNRSRRIIYPQ 224

Query: 207 SEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLPPRHHLGRAIVSFDLETEQ 266
           S+VQ+FTLG+S WRS+GK+ +   +   +A+V+GRLHWVS P R+H  R +VSFDL  EQ
Sbjct: 225 SDVQVFTLGTSAWRSLGKVPYQFVRRPSEALVSGRLHWVSRPRRYHPARRLVSFDLADEQ 284

Query: 267 FIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYGVKESWVKSFNIGTY 326
           F ++PKPD G L+R N+H+ +L GCL+AAVY  YGK+E+WVMK+Y VKESW+K F+IG Y
Sbjct: 285 FREVPKPDCGGLNRCNFHVSVLKGCLAAAVYGNYGKLEVWVMKDYNVKESWIKEFSIGAY 344

Query: 327 MPKALKQ--EAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRALVLFHPNTGKFKDV 386
           MPK LKQ  + + P K+ K V  G++VRVLC+L++GEILLEY+NR LV + P  GKF D+
Sbjct: 345 MPKCLKQNLDRDRPLKIWKNVANGKVVRVLCLLENGEILLEYKNRVLVSYDPKKGKFTDL 404

Query: 387 AFEGMPHWFQTVVHFGSLNRIDT 403
           +F+G+P+WFQTVVH GS N I+T
Sbjct: 405 SFQGIPNWFQTVVHAGSFNWINT 426

[Close]

BLAST of Carg05142 vs. TrEMBL
Match: tr|A0A061DMR0|A0A061DMR0_THECC (F-box and associated interaction domains-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_002226 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.9e-129
Identity = 223/397 (56.17%), Postives = 295/397 (74.31%), Query Frame = 0


Query: 16  KKLNH---QEQTHQMDDLPHDVLLSILSRLPISSLIQFRYVCRSWRLLAQHPQVLDLHNS 75
           +K NH   Q QT  M+ LPH++++ ILSRLPI+SL+QF++VCR WR LAQ P +  +H S
Sbjct: 21  RKTNHDDDQPQTTGMEILPHEIIVDILSRLPITSLVQFKFVCRGWRALAQDPLLAGMHLS 80

Query: 76  VDDHHNFRCLIFHCDYPIRNQLYFVDLPDFRDEKLSVKRIFTPFSATMSEYDVVGSCHGF 135
                N  CLI HCD+PIRNQLYFVDL     +K  VKR++ PF ATM E+DVVGSC+G 
Sbjct: 81  WKADSN-PCLILHCDFPIRNQLYFVDLSAHNQDKEKVKRLYVPFQATMPEFDVVGSCNGL 140

Query: 136 LCLSDSLYNDKLFIYNPFTRDYLELPKTKEFSNPDVVCGVGFHPQTKQFKVLTIVYAR-- 195
           LCLSDSLYND L++YNPFT DY+ELPK++++ + +VV G GFHP+TK++KV+ IVY R  
Sbjct: 141 LCLSDSLYNDALYVYNPFTMDYIELPKSRQYPDQEVVFGFGFHPKTKEYKVVKIVYYRNT 200

Query: 196 --GFRRIQR-RFSHSEVQIFTLGSSNWRSIGKLYHHLAQGQPQAVVNGRLHWVSLPPRHH 255
              + R +R  +  S+VQIFTLGSS WRS+GK+ +   +   +A+V+GRLHWVS P R++
Sbjct: 201 SSSYNRARRIIYPQSDVQIFTLGSSAWRSLGKVSYQFVRRPSEALVSGRLHWVSRPRRYY 260

Query: 256 LGRAIVSFDLETEQFIDIPKPDLGSLSRNNYHLVILNGCLSAAVYCTYGKMEIWVMKEYG 315
             R ++SFDL  EQF ++PKPD G L+R N+HL +L GCL+AAVY  YGK+EIWVMK+Y 
Sbjct: 261 PARRLMSFDLADEQFREVPKPDCGGLNRCNFHLSVLRGCLAAAVYGNYGKLEIWVMKDYN 320

Query: 316 VKESWVKSFNIGTYMPKALKQ--EAEIPFKVSKIVLRGRIVRVLCILKSGEILLEYRNRA 375
           VKESW+K F+IG Y PK LKQ  + + P K+ K    G++VRVLC+L++GEILLEY+NR 
Sbjct: 321 VKESWIKEFSIGAYTPKCLKQNLDRDRPLKIWKNASNGKVVRVLCLLENGEILLEYKNRV 380

Query: 376 LVLFHPNTGKFKDVAFEGMPHWFQTVVHFGSLNRIDT 403
           LV + P  GKF+D+  +G+P+WFQTVVH GS N I+T
Sbjct: 381 LVSYDPKKGKFRDLVLQGIPNWFQTVVHAGSFNWINT 416

The following BLAST results are available for this feature:

BLAST of Carg05142 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534338.1	2.0e-239	99.26	F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948038.1	1.7e-238	98.76	F-box protein At3g07870-like [Cucurbita moschata]	[more]
XP_022971028.1	8.0e-236	98.27	F-box protein At3g07870 [Cucurbita maxima]	[more]
XP_022140713.1	3.4e-186	79.01	F-box protein At3g07870 [Momordica charantia]	[more]
XP_008455966.1	1.1e-179	75.81	PREDICTED: F-box protein At3g07870 [Cucumis melo]	[more]

BLAST of Carg05142 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07870.1	2.4e-109	49.87	F-box and associated interaction domains-containing protein	[more]
AT3G06240.1	1.4e-21	24.50	F-box family protein	[more]
AT3G23880.1	1.4e-21	23.88	F-box and associated interaction domains-containing protein	[more]
AT4G12560.1	9.4e-21	26.68	F-box and associated interaction domains-containing protein	[more]
AT5G49610.1	2.2e-17	23.56	F-box family protein	[more]

BLAST of Carg05142 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SFC7\|FB135_ARATH	4.3e-108	49.87	F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1	[more]
sp\|Q8GXC7\|FBK50_ARATH	2.6e-20	24.50	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]
sp\|Q9LIR8\|FBK67_ARATH	2.6e-20	23.88	F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g2388...	[more]
sp\|Q9SU30\|CPR1_ARATH	1.7e-19	26.68	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
sp\|Q9FGY4\|FB341_ARATH	3.9e-16	23.56	F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1	[more]

BLAST of Carg05142 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1Q1\|A0A1S3C1Q1_CUCME	7.0e-180	75.81	F-box protein At3g07870 OS=Cucumis melo OX=3656 GN=LOC103496029 PE=4 SV=1	[more]
tr\|A0A0A0KA51\|A0A0A0KA51_CUCSA	2.8e-176	74.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109800 PE=4 SV=1	[more]
tr\|W9SM54\|W9SM54_9ROSA	2.4e-132	59.15	F-box protein OS=Morus notabilis OX=981085 GN=L484_020049 PE=4 SV=1	[more]
tr\|A0A1R3G4E1\|A0A1R3G4E1_COCAP	2.7e-131	57.70	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_28976 PE=4 ...	[more]
tr\|A0A061DMR0\|A0A061DMR0_THECC	1.9e-129	56.17	F-box and associated interaction domains-containing protein, putative OS=Theobro...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05142-RA	Carg05142-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 30..70 e-value: 2.1E-5 score: 34.0
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 28..62 e-value: 2.5E-9 score: 36.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 24..70 score: 11.326
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 28..66 e-value: 9.9E-11 score: 43.4
None	No IPR available	PANTHER	PTHR31790:SF18	SUBFAMILY NOT NAMED	coord: 16..402
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 16..402
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 127..351 e-value: 1.2E-33 score: 114.3
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 233..348 e-value: 5.6E-7 score: 29.4
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 23..94

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05142	Csa6G109800	Cucumber (Chinese Long) v2	carcuB0823
Carg05142	MELO3C019366	Melon (DHL92) v3.5.1	carmeB0799
Carg05142	ClCG02G009480	Watermelon (Charleston Gray)	carwcgB0783
Carg05142	CSPI06G08980	Wild cucumber (PI 183967)	carcpiB0843
Carg05142	Cucsa.120450	Cucumber (Gy14) v1	carcgyB0919
Carg05142	CmaCh02G002140	Cucurbita maxima (Rimu)	carcmaB1124
Carg05142	CmaCh20G006640	Cucurbita maxima (Rimu)	carcmaB1121
Carg05142	CmoCh02G002210	Cucurbita moschata (Rifu)	carcmoB1094
Carg05142	Lsi10G000610	Bottle gourd (USVL1VR-Ls)	carlsiB739
Carg05142	Cp4.1LG16g03750	Cucurbita pepo (Zucchini)	carcpeB1133
Carg05142	CsGy6G009100	Cucumber (Gy14) v2	carcgybB0797
Carg05142	MELO3C019366.2	Melon (DHL92) v3.6.1	carmedB0811
Carg05142	CsaV3_6G009350	Cucumber (Chinese Long) v3	carcucB0847
Carg05142	Cla97C02G035820	Watermelon (97103) v2	carwmbB0845
Carg05142	Bhi10G001041	Wax gourd	carwgoB0942

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05142	Carg16089	Silver-seed gourd	carcarB372

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05142	Silver-seed gourd	carcarB235
Carg05142	Cucurbita maxima (Rimu)	carcmaB1120
Carg05142	Cucurbita moschata (Rifu)	carcmoB1091
Carg05142	Cucurbita moschata (Rifu)	carcmoB1092
Carg05142	Cucurbita pepo (Zucchini)	carcpeB1139