Carg05042 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05042
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	spindle and kinetochore-associated protein 1 homolog
Location	Cucurbita_argyrosperma_scaffold_060 : 1014328 .. 1020874 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCAACCCGCCCTTTCTCCATTTCTCAGCAATCGGCTCTCTCTCAGACTCCTCGCTCATCATTGTTTCTTGGAATTCTCCTCTTTCATCCGGTAAGATCTGATGTTTAATTTCTACACTCGTGATAGAGAACTTTATCCCATGCTGATTGGTTTGGAATTCATAAACTGCGTTTGTCATTTTCAGTTTTTGCTGTCTTTTGGCATGTTAATTGGTTTAAAGCAGAGCTTCATCGTTGTTACTTTGTAAAAGAACATTGAATTTCTGAAAGAATCCCGTGCTTTAATCTGTTTCTTCAGCCAAAGCTCCCATGTTAGTTGAATTAATTTGCGGTTCGATAATGTCGTATATGCATATATTTAGACTGTAACTAAACAAGTTTGCTAATTCACCAATTTCAAGTATTGCACTAAAAATTTATCATGCTTTTCTTTGATTTTTATATTTTGGCGATAATTTGATGTTAGTTGAACTAACCATATATTTCAAGTGCTTCTATTAACCAATTTTAGTATTCTACATTTTTATATTGTTGGCATGTTAGTTGAATTAGTGCGCTTACTGATTTTTCTCTTCAGTATTATCTTTCTCAAAGCTGATTTAGAGTTATATTTTTATAAGCTGTAGTTCAGCCTCCTGATGTAGAGTTCTGTTTCTATTCTCTCTGGGTTACCTTGGCACTGCTGACGATTTAATTTGGAAGATTTCATCAGGATTTTGTTGGTGGAAATTTCTAAACCTTTTTGAGATAAATTTTCGTGCGTAAGTTAACATTTGAACATGATTTTTGGAAATGAAAATTCAATGTTTGGAAGATTTTTATTTATTCCTGCCTGTTTAGTGATAAGCTCTATGAATTCTAAGTTGCTTGAGACGAGGGAGTGTTATTAGTTTGACGCCTCTAAAATACTCTCGGGTGCCCACTATTTCTTTTTGTTGCATGGAGTCTATCATTTTATCCTGTTTGGACAGATATGACCTCACTAGCAAAGCAACTTGATGGTGGAAATGAACTATTTATTGGTCTTTCTCCCTTTTATATTCTTCAGGACTAAGAGCATTAGCAGCTTTACCAATTTCCATTAGTGATCTGCATTGTATTTGAAGAATATATCTTCTACTAGAAACAAAATGAAGGTCAAAAGGTCCTACTTGATTTGTTATAGATCAGATTGTTGTTGTTGCTAATTCAGGTTGGTCTGCTTCTCAGTGTTGTTTACCGTTTAGGATGTTCAAGATTTAGTCCTGGAGCTGGTCTAAATAAACTTCTTTTGCTGTGAAGCTTGTTTTAGATATTGAAGTATGTAAATTTGATATTATGATTGTGACTTAATTCTCACTTGATACATCATTTATGCGTACACCTTTTGAGTTTTTATCTCTAATTAGACTGCATATGTGGCATCAATATGGCTTACACATCTCTCTCTCAAATTTTCTCCATAATTGATTCATGTTCCATTGTTGCTTTGCTAGGATGCTGTTATGGTCAATTACGGCGTTTGAACTGTTTTTGGTTAAATTAATTAATTCAAGGTTTGTTTTTGACGTCAAATATAAAGTTTGTACAGCGACAATCCTTTGAATCCTTAAGAAAATTGGCCTTTTACTATCATTCTGCTTTAATGGTGAGGGTGTTTAGCCAATTTTCACTCTCAAGTTTCAAATTTCTAATCGTTCATCTTTTTTAAAAAACTCGTGGACTAACAAATCTTTGTAACTCAAACTTCAGAGCTGCACAACTTTTACATAGAGGGGAGATAGATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTTAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATAGTGAGCGGAAATATTTAAGCCTTTATTCTTTTTCTTGGCTATAATTCTATTTGATGCATAAATGTCACCACTGCGGGATTGACTTCTGTTGTCGTAGTGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAATTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAGTATATTCGCCCCTCCCTCTTTAGACCATCCTTCTGCTATATTAAATTCTGTTTGCTCCTTTTCCTCTGCATCATTAGGAAACCATAAGAAATTAGTGAAAGAATGTTAGAAATGTGTTTACCTCAAATAAATAACATATTCAGTCTGAAAAAGTTTTGAAAAAATTGGGAGAATTGATAACCCAAAAAACTCGAGCAATAAAATTCCCATTCCTTGAACTGCAAAATACTTTAAGATTTATAATTACTGATTATTATCATTCTCATGACGCTATGTTTCTCTTTGTAAATTTTGCTGAGCTTTACAGAGTAGTGGGTTTAACAGTTTTAGTGCTGTTTTGAGTAGCTAAATTATTGCTTTGTTGATGTGCAATATAACATTTTTCACCAAATTCTGCAGAAACTTATCGAAGCATCTCTGAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCATATCATATTCAGCCCGAAAGAGTTTCTGCGTTGAACTTAAATACCAGGTAACTAATTTGTTTAAAATTTTATAGGAATTCCATGATCTGAACCCCAGCTTCAAGTTTTATTGTTAAGGTAGTTGTGATTCATGAAAAGGTTTTATGGCCTTCTGTTTTCAGTTTTTGTTCACAGGCCAAAAAAACTGATACTCAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGTCGGAATTCTCTTCCTTTAGATATGTTTGTGTAAAATGAATGCATCATACACGTTCATTCCCATATGAATTAGCAAATAGGGCTCAAGTTAGGCATTAACTTTTTCGTGAACCTGAAAGCCATTACCTTGCAGGTTACAATAAACTTAATCTTTCAATTATAATTTTAGTACTTCCCCGCTTCATGGGTTTTAATTAGCACAGTGCTCAATGGGTGATAATTAGAGAGGAAATAAGGTTATTGACCTTCAAATACAGAACTCTTGTTTTGATACGATACTAAATCACAATTGAATTCAAAATCTTAAGTTGATGGAGTATGGTGAATTTAATATTTAATTTATATTCTTAACATTATGGTATGACAAAAAAATTTAAACTTCTCCCGGAATCATTCTTTTTTCATCATTAATGTAAAAAAGTGACCTTTACAATGCAATTTCAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCGTGAGTTGTTCTTTCCTCTTATTGGCACGTGAGAATAACTGCTAGCTAGTTCTGCTTACTTACATTCCTAAAATAAAATGCACTACGACAGCTCCTGATATTACTAACTTAGGTATCAGCATTTGAAACTGAAATAAAGCTAATTATACGAAAAAAAAGCCCTTCAGCTATGTTGTTGGCTTCCATTTTACGCTAATATTTTGATTTGTTACAAAAAAAAGGACATTTCCATCTGCAGTTTCTGTTATAATTAGAATTTTTGAAACGTTAGGGACAAAATTGAAGCCAAATTAATTATACAAAATGTCCCAAACGAGTGTGATTGGTTTCAATTTTGCCCCTAATGTTTTTGAAAGTTTCAATGTCGCTCTCAATCTTTTATTTTCTATTAGACATATTAATGAAGATTGATAATAAATGTTTATTATGAAACAAATTAAAACATTGAAAGTTTAAGAAACTTTGAGGACAAAAGTGAAACCAACTACATCCACGTTAGGGACATTTTCTATAATATACCCTTCGAATAATTTTCACGACCGGTAATCTGGTGTTTGGAGTGCATTAGATAGAGCTGAACAATTCGAATATCAAAGAAATAAGATAGCTGCAGATGTCTTTAGCGTATGTTTTTCCTGTAAAGTAGCTTGTAATCCTCCAATTTTTTTAATTAACTCTTACCAACCACAGATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGGTTCGTGTGAAATTCTCTCTCTAACTTAGCAAGCATATTGATAACCACCACACCACTTATATGCTGACAATGGGTAATTTTTGTGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGGTAAGTTTACTTGCAATCTTTCCACATCCGCATCTCTTCTTCCTTTCGCCTCCTTTCTATATTGATGCTTGCAAAATTTAAGATGTAGCGATGTGGGTTCTAGGCACACTAAAGATTATTACATAATATATTCATTAATATTAATGCATTATATATTGGGAAAACGTCATGTAGAATCATGTGGGTGTTCTGATTGTGTTCCTAGTAGATGCTACACTGAGAATTATTTTTCTTGCCCATTTTACTTGAGATCTTAGGAACCCCTTTCTATCTAATTGACAAAACTGGATAGAGGAAAAAAATGTGATTTTGGATGGTTGATCGTCTGCATCCTGTCCCAGTTGTAGGCGAAGTGGCAATGGTGGAGGTAGGCAACGAAGAGCACTGTCAAGAGTTGCTTGTAAAATAAGAGAGTTAGACAATAGTATGGTGTTGTCTAATTACTAGATGGTGCTTTGCAAGTGGTTGGATTAGGTGAATACGGTGTAGCTAAGTATCGTGGTAGAGTGGTAGCATGCAAATGGTCACCTTTGGTCATCCCACCTTTATCCCTTCGAGCGTTGTGCTAAATTAAGGATGATCGCATTGCATTGGGTGGCCTTCGGGCTTATGTTGGGCTAACTTGTGGCTAGGGTACCAATTGGTCAACCCATACAACTTTATGCTCAACCTACTCTATTTTGCTCCTACTAGACCTAGTTGGGCTAGAGTCTACAAATTATTATTTTATTGCAAAATTTACCCAAAGCAATTGCTCTTTGCTAGGAGTGTCGGTGGGTGGCGTATGAGGACGAGAAGAGCCTCCCATCCCTGCAAAAGGTCCTCCAAAAGACTCACCTAATCCTTCGTTCTCATACGCTACCCACCGTCAAATTGGTGATTCGCTGAACAGTGTGCACGCTTCATTCTTCGTTCTATCTGTTTCCGTAGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTTTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGTAAACATACCAAAATTTTGTTAGATTTTAGACTCTGACTGAATAAGAGCGTCGAAGCGTATAGCTCTTCTATTTTACCAGCAACCCTCTACCAGACTCTCTATCACTACCTTCAGCCTTGTCACCTTACCTTTGATCGGATTAATGTGCACGCGATGAACCAATTGTTGTTTGTCCAAAATCATGCAACAGCATCCCTTACCCCACTCCTAATGGCAAAAGAATCCCCAACATTGCCCCCATGCTTGCAAATTCTAGAGCAGGGTGGGGTTTGGGTCTTGTGGGGAATTTGTTCCTAATTTGACGGGGAATTCTCGTGCGGTATCTCCATGGGGACAACTCGCATTGGAACCCGATGAGTGACAACAAGTGGTGCAACAAATTGATGAGAGCAAACGATGTTTGATGAGTGCAGATGCACCAATATGTGATGGAAAAAATGGTAGATGCAACAATGGCACCTGGTAAGTGACAGTAGTGGTGCTTGGCGAGTTGGCGAGAGCAAACAATGTTTGGAGAGTAAGCAAACTGGCTACGATAGGTGGCAGCTGATAGAGATAACCTTGTTAGTCCTCAAATCTCTTCTTGGCAAGGGCAAATGATGGAACCAAAGCTTAAAAAAAATAAAATAAAAGTTTGGCAGTGAAGGAGGAGGAGAAGAAAATGATGATGGGGTTAGGGTTTCAAGTTGAAACTATCTATAACAAATAAAATTATGAACATGGGCTATAAAAAGTGCCTGAATTAATACAAGTAAAGACTAACATTGATCTTGAACACTGTCAAATTGGTGATTCCGATGGGTAACCACAGGGAGTCAGGGATCTGAACCCATGTTTTATTTTTATTTTTTTTTAATCTTATCAAGATGTCGTGTTTGTATTTCCGGTAAATGCAGGAGCTAAGAGATATTGCAACCACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTAAGTTTGTCATATATAATTTGCTCAATCAATAAGCAATCATAGTGATGTTGGGAGAGAATACCATTAAGCAAATAGTAGTGTTATGTTAGGAGATAATACCAAAAGTTCATTCATCTAGTCAATACTTTAGTGTATGTTATCATCATAATTCGAAGCTTTTTTCATACCATAGTTCATATAGTACTGTTGATTGATTCTAGAAAAAACGGTCAAATTTTGTGCATCACAGGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCGTAATTTTACTATTAAAACCATCATAA

mRNA sequence

TCAGCAACCCGCCCTTTCTCCATTTCTCAGCAATCGGCTCTCTCTCAGACTCCTCGCTCATCATTGTTTCTTGGAATTCTCCTCTTTCATCCGGATGCTGTTATGGTCAATTACGGCGTTTGAACTGTTTTTGGTTAAATTAATTAATTCAAGAGCTGCACAACTTTTACATAGAGGGGAGATAGATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTTAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATATGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAATTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAAAACTTATCGAAGCATCTCTGAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCATATCATATTCAGCCCGAAAGAGTTTCTGCGTTGAACTTAAATACCAGTTTTTGTTCACAGGCCAAAAAAACTGATACTCAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTTTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGAGCTAAGAGATATTGCAACCACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCGTAATTTTACTATTAAAACCATCATAA

Coding sequence (CDS)

ATGGACTTGAAAGAAGCTGGTTCATTGCTTAATAATCTAGTTGCTGCTTTTAATGGTCGGATCGCGGAGCTCCAAGATCTCGTAATTGCACGAAATATGTATCCGGCGAGTTGTATCCCTGATTTGTCGGCAGTTGATGCATCATTGAAGGCAATGGAATTGCAGGTGCAGGCAATCAAGAACCAGTTACAAGAAGAAGCTGAAGCAATTCCCAAAGCGAAAAAACTTATCGAAGCATCTCTGAAGCAGCAGAAGAGGTTAGAAAGTATATCACTTCACGTTCCCTCATATCATATTCAGCCCGAAAGAGTTTCTGCGTTGAACTTAAATACCAGTTTTTGTTCACAGGCCAAAAAAACTGATACTCAATTGGGCTCCCTAGAGGCTGAGAATGTGATTTCAGTCTTACCTAAGGAGAAGAAAGGTTCCTCTCCACCACTTTGGTACATAACCACCGACGAACTGAATTCACTGTCATCATATATGAAAGGAAGGTTGACAGTTGACAAGGTCAATGCTGCTATTAATGACATGGCAACATATGCTGAAGCAAATGCTCAGCTTATTGTCGTCCCAAAGAAGAAGCTGGCTGAGAACCAATGGGAAAAGGCTCTGACTGCTCACAAAAAGCTATCAAACAACTTGCAACATTGGCATGTTTCATTCTGTCTCTGTGTAAAGGGCACGAAAGCAGAGGAGCTAAGAGATATTGCAACCACCGAAGCAGTGAAAGGAAAATATTTCTTTCTTGAAACTGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAAGCCATACTAACTGTCCTTCGACATCTTGGACGCATAAGCGAGACTCGGATTGGACATCAACGCGTAATTTTACTATTAAAACCATCATAA

Protein sequence

MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKNQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKTDTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS

Homology

[Close]

BLAST of Carg05042 vs. NCBI nr
Match: XP_022960263.1 (spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960264.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960265.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960266.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960267.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960268.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136
Identity = 268/295 (90.85%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK
Sbjct: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT 120
           NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT
Sbjct: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT 120

Query: 121 DTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT 180
           DTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT
Sbjct: 121 DTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT 180

Query: 181 YAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATT 240
           YAEANAQLIVVPKKKLAENQWEKAL                           ELRDIATT
Sbjct: 181 YAEANAQLIVVPKKKLAENQWEKAL---------------------------ELRDIATT 240

Query: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
           EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS
Sbjct: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 268

[Close]

BLAST of Carg05042 vs. NCBI nr
Match: XP_023004833.1 (spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_023004834.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_023004835.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_023004837.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_023004838.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_023004839.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima])

HSP 1 Score: 490.3 bits (1261), Expect = 4.4e-135
Identity = 264/295 (89.49%), Postives = 267/295 (90.51%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK
Sbjct: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT 120
           NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQP+RVSALNLNTS CSQAKKT
Sbjct: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPQRVSALNLNTSLCSQAKKT 120

Query: 121 DTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT 180
           DT+LGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT
Sbjct: 121 DTELGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT 180

Query: 181 YAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATT 240
           YAEANAQLIVVPKKKLAENQWEKAL                           ELRDIATT
Sbjct: 181 YAEANAQLIVVPKKKLAENQWEKAL---------------------------ELRDIATT 240

Query: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
           EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQR+ILLLKPS
Sbjct: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRIILLLKPS 268

[Close]

BLAST of Carg05042 vs. NCBI nr
Match: XP_023515285.1 (spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023515286.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023515287.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.8 bits (1244), Expect = 4.2e-133
Identity = 262/295 (88.81%), Postives = 264/295 (89.49%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK
Sbjct: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT 120
           NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQ ERVSALNLNTS CSQAKKT
Sbjct: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQSERVSALNLNTSLCSQAKKT 120

Query: 121 DTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMAT 180
           DT+LGSL+AE VISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDM T
Sbjct: 121 DTELGSLDAEKVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMVT 180

Query: 181 YAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATT 240
           YAEANAQLIVVPKKKLAENQWEKAL                           ELRDIATT
Sbjct: 181 YAEANAQLIVVPKKKLAENQWEKAL---------------------------ELRDIATT 240

Query: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
           EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS
Sbjct: 241 EAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 268

[Close]

BLAST of Carg05042 vs. NCBI nr
Match: XP_022154349.1 (spindle and kinetochore-associated protein 1 homolog [Momordica charantia] >XP_022154357.1 spindle and kinetochore-associated protein 1 homolog [Momordica charantia] >XP_022154365.1 spindle and kinetochore-associated protein 1 homolog [Momordica charantia])

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 240/296 (81.08%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MD KEAGSLL+NL+AAFN RIAELQDLVIARNMYPASC+PDLSAVDASLKAMELQVQAIK
Sbjct: 1   MDAKEAGSLLDNLIAAFNSRIAELQDLVIARNMYPASCVPDLSAVDASLKAMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKT 120
           NQL+EEAEAIPKAKKLIEASLKQQKRLESISLHVP+Y IQPERVSALNLNTS CS+A  +
Sbjct: 61  NQLREEAEAIPKAKKLIEASLKQQKRLESISLHVPTYQIQPERVSALNLNTSLCSEANNS 120

Query: 121 DTQLGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMA 180
            T LGSLEA++VISVLPK KK  SSPPLWYITTD+LNSLSSYM+GRLTVDKVNAA+NDMA
Sbjct: 121 GTGLGSLEAKDVISVLPKGKKSCSSPPLWYITTDDLNSLSSYMRGRLTVDKVNAAVNDMA 180

Query: 181 TYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIAT 240
           TYAEA+AQLI VPKKKLAEN W+KAL                           ELRDIAT
Sbjct: 181 TYAEASAQLIAVPKKKLAENLWDKAL---------------------------ELRDIAT 240

Query: 241 TEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
            EAVKGKYFFLETDM+GPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS
Sbjct: 241 MEAVKGKYFFLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 269

[Close]

BLAST of Carg05042 vs. NCBI nr
Match: XP_004139626.1 (PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 239/296 (80.74%), Postives = 254/296 (85.81%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+LKEAGSLL+NL+ AFNGRIAELQDLVIARNMYPASC+PDLSAVDASLK MELQVQAIK
Sbjct: 1   MELKEAGSLLDNLIVAFNGRIAELQDLVIARNMYPASCLPDLSAVDASLKVMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYH-IQPERVSALNLNTSFCSQAKK 120
            QL+EEAEAIPKAKKLIEASLKQQKRLESISLHVP+Y+ I P+RVSALNLNTS CS+AK 
Sbjct: 61  KQLREEAEAIPKAKKLIEASLKQQKRLESISLHVPTYYQILPDRVSALNLNTSLCSEAKA 120

Query: 121 TDTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMA 180
           + T+LGS EAENVISVLPKEKK SSPPLWYIT DELNSLSSYM+GRLTVDKVNAA+ DMA
Sbjct: 121 SGTELGSREAENVISVLPKEKKVSSPPLWYITIDELNSLSSYMRGRLTVDKVNAAVYDMA 180

Query: 181 TYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIAT 240
           TYAEANAQLI +PKKKLAEN WEKAL                           ELRDIAT
Sbjct: 181 TYAEANAQLIGIPKKKLAENLWEKAL---------------------------ELRDIAT 240

Query: 241 TEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
           T AVKGKYFFLETDM+GPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS
Sbjct: 241 TNAVKGKYFFLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 269

[Close]

BLAST of Carg05042 vs. TAIR10
Match: AT3G60660.1 (unknown protein)

HSP 1 Score: 291.2 bits (744), Expect = 7.2e-79
Identity = 170/300 (56.67%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+  +AGS L++L+A+FN RI ELQ+LVIARNMYPAS IPDLSA+D +L +MELQVQ+IK
Sbjct: 1   MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFC---SQA 120
           ++L+EE EAIPKAKKLIEASLKQQ +L+ +S++ PS+   P++ + LN + + C     A
Sbjct: 61  DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHF--PDKATMLNSDLNRCLLQENA 120

Query: 121 KKTD--TQLGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAA 180
           K+ +  + L SL+ +   +VLPKEKKG  SPPLWYIT +ELNSLSSYM+GRLT++KVNAA
Sbjct: 121 KQYEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITVEELNSLSSYMRGRLTLEKVNAA 180

Query: 181 INDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEEL 240
           INDMA+YAEANA LI   K+KLAEN WEKAL                           +L
Sbjct: 181 INDMASYAEANAHLIAASKQKLAENLWEKAL---------------------------KL 240

Query: 241 RDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKP 295
           RDI                   PSLKLDNTGKAILTVLRHLGRISETRIG  RVI+L+KP
Sbjct: 241 RDIVXXXXXXXXXXXXXXXXXXPSLKLDNTGKAILTVLRHLGRISETRIGQNRVIILMKP 271

[Close]

BLAST of Carg05042 vs. Swiss-Prot
Match: sp|Q9LZZ7|SKA1_ARATH (Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g60660 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 170/300 (56.67%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+  +AGS L++L+A+FN RI ELQ+LVIARNMYPAS IPDLSA+D +L +MELQVQ+IK
Sbjct: 1   MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFC---SQA 120
           ++L+EE EAIPKAKKLIEASLKQQ +L+ +S++ PS+   P++ + LN + + C     A
Sbjct: 61  DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHF--PDKATMLNSDLNRCLLQENA 120

Query: 121 KKTD--TQLGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAA 180
           K+ +  + L SL+ +   +VLPKEKKG  SPPLWYIT +ELNSLSSYM+GRLT++KVNAA
Sbjct: 121 KQYEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITVEELNSLSSYMRGRLTLEKVNAA 180

Query: 181 INDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEEL 240
           INDMA+YAEANA LI   K+KLAEN WEKAL                           +L
Sbjct: 181 INDMASYAEANAHLIAASKQKLAENLWEKAL---------------------------KL 240

Query: 241 RDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKP 295
           RDI                   PSLKLDNTGKAILTVLRHLGRISETRIG  RVI+L+KP
Sbjct: 241 RDIVXXXXXXXXXXXXXXXXXXPSLKLDNTGKAILTVLRHLGRISETRIGQNRVIILMKP 271

[Close]

BLAST of Carg05042 vs. Swiss-Prot
Match: sp|B4FGS2|SKA1_MAIZE (Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-63
Identity = 141/294 (47.96%), Postives = 190/294 (64.63%), Query Frame = 0


Query: 10  LNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKNQLQEEAEA 69
           L+ + AAF  ++ ELQDLV+AR+M+PA+ +PDL+ VDA + AME QV+ I  +LQEE +A
Sbjct: 13  LDAVAAAFKSQVMELQDLVLARSMFPATALPDLANVDALVTAMESQVETISRRLQEELDA 72

Query: 70  IPKAKKLIEASLKQQKRLESISLHVPS---------YHIQPERVSALNLNTSFCSQAKKT 129
           IPKAKKL++ SLK++++L+ +  ++PS          H Q       + N+SF       
Sbjct: 73  IPKAKKLVQRSLKEEEKLQHMLANLPSGMRKNDFANQHEQSSSRMLPHFNSSF------- 132

Query: 130 DTQLGSLEAENVISVLPKEKKGSSP-PLWYITTDELNSLSSYMKGRLTVDKVNAAINDMA 189
            T+    E +     +   +KG +P P WYI+T+EL+SLSSYM+GRLT++KVN AIN++A
Sbjct: 133 -TEANECELKIKDEPVAAPRKGRAPAPRWYISTEELDSLSSYMRGRLTLEKVNIAINEVA 192

Query: 190 TYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIAT 249
           +YA+ANA L+  PKKKL+E+ WEKAL                           ELRDIA 
Sbjct: 193 SYADANAHLVTCPKKKLSEDTWEKAL---------------------------ELRDIAA 252

Query: 250 TEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 294
           + AVKG +FFLE D++GP LKLDNTGKAILTVLRHLGR  E RIGH RV +L K
Sbjct: 253 SGAVKGNHFFLEADIKGPGLKLDNTGKAILTVLRHLGRFHEVRIGHHRVFILSK 271

[Close]

BLAST of Carg05042 vs. Swiss-Prot
Match: sp|Q7XAM0|SKA1_ORYSJ (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0484500 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 137/298 (45.97%), Postives = 183/298 (61.41%), Query Frame = 0


Query: 2   DLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKN 61
           D    G  L+ + AAF  R+ ELQ+LV+ARNMYPA+ IPDL+AVD SL            
Sbjct: 5   DASRLGESLDAVSAAFQSRVMELQELVLARNMYPATAIPDLAAVDVSLTXXXXXXXXXXX 64

Query: 62  QLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPS------YHIQPERVSALNLNTSFCS 121
                 EA PKAKKL++ SLKQQ+RL+ +  ++P+      +    E  S++    S   
Sbjct: 65  XXXXXXEAFPKAKKLVQQSLKQQRRLQLMLANMPTGMREDVFATPLEHNSSMMFPESLNF 124

Query: 122 QAKKTDTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAI 181
            +   + +   L+ +   +  PK+ +G + P WYI+T+EL+SLSSYM+GRLT++KVN AI
Sbjct: 125 SSAVPEVRDHDLKIKEEPTAPPKKGRGPA-PRWYISTEELDSLSSYMRGRLTLEKVNIAI 184

Query: 182 NDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELR 241
           N++A+YA+ NA L+  PKKKL+E+ WEKAL                           ELR
Sbjct: 185 NEVASYADGNAHLVACPKKKLSEDTWEKAL---------------------------ELR 244

Query: 242 DIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 294
           DIA  E+VKG++FFLETD++GP LKLD TGKAILTVLRHLGR  ETRIGH RV +L K
Sbjct: 245 DIAARESVKGRHFFLETDIKGPGLKLDTTGKAILTVLRHLGRFQETRIGHHRVFILSK 274

[Close]

BLAST of Carg05042 vs. Swiss-Prot
Match: sp|B8B624|SKA1_ORYSI (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26011 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-60
Identity = 137/298 (45.97%), Postives = 182/298 (61.07%), Query Frame = 0


Query: 2   DLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIKN 61
           D    G  L+ + AAF  R+ ELQ+LV+ARNMYPA+ IPDL+AVD SL            
Sbjct: 5   DASRLGESLDAVSAAFQSRVMELQELVLARNMYPATAIPDLAAVDVSLTXXXXXXXXXXX 64

Query: 62  QLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPS------YHIQPERVSALNLNTSFCS 121
                 EA PKAKKL++ SLKQQ+RL+ +  ++P+      +    E  S++    S   
Sbjct: 65  XXXXXXEAFPKAKKLVQQSLKQQRRLQLMLANMPTGMREDVFATPLEHNSSMMFPESLNF 124

Query: 122 QAKKTDTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAI 181
            +   + +   L+ +   +  PK+ +G + P WYI+T+EL+SLSSYM+GRLT++KVN AI
Sbjct: 125 SSAVPEVRDHDLKIKEEPTAPPKKGRGPA-PRWYISTEELDSLSSYMRGRLTLEKVNIAI 184

Query: 182 NDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELR 241
           N++A+YA+ NA L+  PKKKL+E+ WEKAL                            LR
Sbjct: 185 NEVASYADGNAHLVACPKKKLSEDTWEKALV---------------------------LR 244

Query: 242 DIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 294
           DIA  E+VKGK+FFLETD++GP LKLD TGKAILTVLRHLGR  ETRIGH RV +L K
Sbjct: 245 DIAARESVKGKHFFLETDIKGPGLKLDTTGKAILTVLRHLGRFQETRIGHHRVFILSK 274

[Close]

BLAST of Carg05042 vs. Swiss-Prot
Match: sp|Q96BD8|SKA1_HUMAN (Spindle and kinetochore-associated protein 1 OS=Homo sapiens OX=9606 GN=SKA1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 69/282 (24.47%), Postives = 124/282 (43.97%), Query Frame = 0


Query: 6   AGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPD-LSAVDASLKAMELQVQAIKNQLQ 65
           A S L  L +  N +I  ++  +  RN      +   L+ +   +  +   +  ++ ++Q
Sbjct: 2   ASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQ 61

Query: 66  EEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFCSQAKKTDTQL 125
            + +     K+L E+  +  K +E +  +VPS H+    V      T  C +    D + 
Sbjct: 62  YQEQTNNSLKELCESLEEDYKDIEHLKENVPS-HLPQVTV------TQSCVKGSDLDPEE 121

Query: 126 G-SLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMATYAE 185
              +E    +   PKE++ S   + +IT DE N + SYMK RLT +++N  I ++     
Sbjct: 122 PIKVEEPEPVKKPPKEQR-SIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVI 181

Query: 186 ANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIATTEAV 245
           +  +++  PKK +              ++ NL H  +           EE +D       
Sbjct: 182 SKYKILHQPKKSM------------NSVTRNLYHRFID----------EETKD------T 241

Query: 246 KGKYFFLETDMRG-PSLKLDNTGKAILTVLRHLGRISETRIG 285
           KG+YF +E D++   +LK D     +L +LRH  R+SE R G
Sbjct: 242 KGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRRLSEVRGG 247

[Close]

BLAST of Carg05042 vs. TrEMBL
Match: tr|A0A1S3C6Z1|A0A1S3C6Z1_CUCME (spindle and kinetochore-associated protein 1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497553 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.3e-119
Identity = 239/296 (80.74%), Postives = 254/296 (85.81%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MD KEAGSLL+NL+ AFNGRIAELQDLVIARNMYPASC+PDLSAVDASLK MELQVQAIK
Sbjct: 1   MDSKEAGSLLDNLIVAFNGRIAELQDLVIARNMYPASCLPDLSAVDASLKVMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYH-IQPERVSALNLNTSFCSQAKK 120
           NQL+EEAEAIPKAKKLIEASLKQQKRLESISLHVP+Y+ I PERVSALNLNTS  S+AK 
Sbjct: 61  NQLREEAEAIPKAKKLIEASLKQQKRLESISLHVPTYYQILPERVSALNLNTSLGSEAKT 120

Query: 121 TDTQLGSLEAENVISVLPKEKKGSSPPLWYITTDELNSLSSYMKGRLTVDKVNAAINDMA 180
           + ++LGS EAENVISVLPKEKK SSPPLWYIT DELNSLSSYM+GRLTVDKVNAA+NDMA
Sbjct: 121 SGSELGSREAENVISVLPKEKKVSSPPLWYITIDELNSLSSYMRGRLTVDKVNAAVNDMA 180

Query: 181 TYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEELRDIAT 240
           TYAEANAQLI +PKKKLAEN WEKAL                           ELRDIA 
Sbjct: 181 TYAEANAQLIGIPKKKLAENLWEKAL---------------------------ELRDIAA 240

Query: 241 TEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS 296
           T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRH+GRISETRIGHQRVILLLKPS
Sbjct: 241 TDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHVGRISETRIGHQRVILLLKPS 269

[Close]

BLAST of Carg05042 vs. TrEMBL
Match: tr|A0A2N9EEF1|A0A2N9EEF1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5229 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91
Identity = 192/306 (62.75%), Postives = 237/306 (77.45%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M+ K+AG+ L +L+++FN RI ELQDLVIARNMYPA+ I DLSAVDASLKAMELQ+ +IK
Sbjct: 1   MEAKKAGTSLESLMSSFNTRILELQDLVIARNMYPATSITDLSAVDASLKAMELQLHSIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLNTSFC--SQAK 120
           + L++E  AIPKAKKLI+ASL+QQK+L+S+S++ PSY   PER+   NL T+ C  S+  
Sbjct: 61  DHLRDETLAIPKAKKLIDASLRQQKKLQSMSVYAPSY--LPERMMTTNLETNRCLMSEFS 120

Query: 121 KTDTQLGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNAAIND 180
           K D  +GSL+ E   + LPKEKKG   PPLWYIT +EL+SLSSYM+GRLT++KVNAAIND
Sbjct: 121 KQDATVGSLKHEEEPAALPKEKKGRGPPPLWYITANELDSLSSYMRGRLTLEKVNAAIND 180

Query: 181 MATYAEANAQLIVVPKKKLAENQWEKALTAHKKL---------SNNLQHWHVSFCLCVKG 240
           MATYAEANA +I  PKKKLAEN WEK+L ++  L         S+N     +   +C   
Sbjct: 181 MATYAEANAHIIAAPKKKLAENLWEKSLNSNGWLPLGGCIRDPSSNPSLSRLGGSMC--- 240

Query: 241 TKAEELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRV 295
           +   ELRDIA TEAVKGK+FFLE D++GP++KLDNTGKAILTVLRHLGRISETRIGH RV
Sbjct: 241 SGMGELRDIAMTEAVKGKHFFLENDIKGPAMKLDNTGKAILTVLRHLGRISETRIGHHRV 300

[Close]

BLAST of Carg05042 vs. TrEMBL
Match: tr|A0A1R3K0L3|A0A1R3K0L3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12497 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91
Identity = 193/301 (64.12%), Postives = 230/301 (76.41%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MDLK+AGS L++LV++FN RIAELQ+LVIARNMYPAS + DLSA+DA+LK MELQVQ IK
Sbjct: 1   MDLKQAGSSLDSLVSSFNTRIAELQELVIARNMYPASSVTDLSAIDAALKGMELQVQVIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNL--NTSFCSQAK 120
           ++L+EE EAIPKAKKLI AS++QQK+L+S+S++ PSY   PE+++ LNL  +     +A 
Sbjct: 61  DRLREETEAIPKAKKLIAASIRQQKKLQSMSVYAPSY--LPEKMTTLNLDFDKGLALEAS 120

Query: 121 KTDTQL----GSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNA 180
           K   QL    G  + +   + LPKEKKG  SPPLWYIT  EL+SLSSYM+GRLT++KVNA
Sbjct: 121 KQQHQLQPNSGYSKLDEEPAALPKEKKGRGSPPLWYITAGELDSLSSYMRGRLTLEKVNA 180

Query: 181 AINDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEE 240
           AINDMATYAEANAQL+  PKKKLAEN WE+AL                           E
Sbjct: 181 AINDMATYAEANAQLVAAPKKKLAENLWERAL---------------------------E 240

Query: 241 LRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 295
           LRDIATTE VKGK+FFLE+DM+GPSLKLDNTGKAILTVLRHLGRISETRIGH RVI+LLK
Sbjct: 241 LRDIATTEGVKGKHFFLESDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHHRVIILLK 272

[Close]

BLAST of Carg05042 vs. TrEMBL
Match: tr|A0A061E205|A0A061E205_THECC (Spindle and kinetochore-associated protein 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005566 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 191/300 (63.67%), Postives = 232/300 (77.33%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           M LK+AGS L++L+++FN RIAELQ+LVIARNMYPAS + DLSA+DA+LK MELQVQAIK
Sbjct: 1   MYLKQAGSSLDSLMSSFNTRIAELQELVIARNMYPASSVTDLSAIDAALKGMELQVQAIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNLN------TSFC 120
           ++L+EE EAIPKAKKLI ASL+QQK+L+S+S++VPS+   PE+++ LNL+          
Sbjct: 61  DRLREETEAIPKAKKLIAASLRQQKKLQSMSVYVPSH--LPEKMTTLNLDGDRGFVPEAS 120

Query: 121 SQAKKTDTQLGSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNA 180
            Q ++    LGS + +   + LPKEKKG  SPPLWYIT+ EL+SL+SYM+GRLT++KVNA
Sbjct: 121 RQQQRQQPNLGSSKVQEEPAALPKEKKGRGSPPLWYITSGELDSLASYMRGRLTLEKVNA 180

Query: 181 AINDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEE 240
           AINDMATYAEANAQL+  PKKKLAEN WE+AL                           E
Sbjct: 181 AINDMATYAEANAQLVAAPKKKLAENLWERAL---------------------------E 240

Query: 241 LRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 294
           LRDIATTEAVKGK+FFLE+DM+GPSLKLDNTGKAILTVLRHLGRISETRIGH RVI+LLK
Sbjct: 241 LRDIATTEAVKGKHFFLESDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHNRVIILLK 271

[Close]

BLAST of Carg05042 vs. TrEMBL
Match: tr|A0A1R3I7S5|A0A1R3I7S5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14316 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.9e-90
Identity = 192/301 (63.79%), Postives = 230/301 (76.41%), Query Frame = 0


Query: 1   MDLKEAGSLLNNLVAAFNGRIAELQDLVIARNMYPASCIPDLSAVDASLKAMELQVQAIK 60
           MDLK+AGS L++LV++FN RIAELQ+LVIARNMYPAS + DLSA+DA+LK MELQVQ IK
Sbjct: 1   MDLKQAGSSLDSLVSSFNTRIAELQELVIARNMYPASSVTDLSAIDAALKGMELQVQVIK 60

Query: 61  NQLQEEAEAIPKAKKLIEASLKQQKRLESISLHVPSYHIQPERVSALNL--NTSFCSQAK 120
           ++L+EE EAIPKAKKLI ASL+QQK+L+S+S++ P Y   PE+++ L+L  +     +A 
Sbjct: 61  DRLREETEAIPKAKKLIAASLRQQKKLQSMSVYAPPY--LPEKMTTLSLDFDKGLALEAS 120

Query: 121 KTDTQL----GSLEAENVISVLPKEKKG-SSPPLWYITTDELNSLSSYMKGRLTVDKVNA 180
           K   QL    G  + +   + +PKEKKG  SPPLWYIT  EL+SLSSYM+GRLT++KVNA
Sbjct: 121 KQQHQLQPNSGYSKLDEEPAAVPKEKKGRGSPPLWYITAGELDSLSSYMRGRLTLEKVNA 180

Query: 181 AINDMATYAEANAQLIVVPKKKLAENQWEKALTAHKKLSNNLQHWHVSFCLCVKGTKAEE 240
           AINDMATYAEANAQL+  PKKKLAEN WE+AL                           E
Sbjct: 181 AINDMATYAEANAQLVAAPKKKLAENLWERAL---------------------------E 240

Query: 241 LRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLK 295
           LRDIATTEAVKGK+FFLE+DM+GPSLKLDNTGKAILTVLRHLGRISETRIGH RVI+LLK
Sbjct: 241 LRDIATTEAVKGKHFFLESDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHHRVIILLK 272

The following BLAST results are available for this feature:

BLAST of Carg05042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960263.1	1.4e-136	90.85	spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_02...	[more]
XP_023004833.1	4.4e-135	89.49	spindle and kinetochore-associated protein 1 homolog [Cucurbita maxima] >XP_0230...	[more]
XP_023515285.1	4.2e-133	88.81	spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo...	[more]
XP_022154349.1	1.8e-120	81.08	spindle and kinetochore-associated protein 1 homolog [Momordica charantia] >XP_0...	[more]
XP_004139626.1	1.2e-119	80.74	PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis sativus...	[more]

BLAST of Carg05042 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60660.1	7.2e-79	56.67	unknown protein	[more]

BLAST of Carg05042 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZZ7\|SKA1_ARATH	1.3e-77	56.67	Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=...	[more]
sp\|B4FGS2\|SKA1_MAIZE	1.1e-63	47.96	Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV...	[more]
sp\|Q7XAM0\|SKA1_ORYSJ	1.9e-60	45.97	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japo...	[more]
sp\|B8B624\|SKA1_ORYSI	3.2e-60	45.97	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indi...	[more]
sp\|Q96BD8\|SKA1_HUMAN	1.2e-09	24.47	Spindle and kinetochore-associated protein 1 OS=Homo sapiens OX=9606 GN=SKA1 PE=...	[more]

BLAST of Carg05042 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6Z1\|A0A1S3C6Z1_CUCME	2.3e-119	80.74	spindle and kinetochore-associated protein 1 homolog isoform X3 OS=Cucumis melo ...	[more]
tr\|A0A2N9EEF1\|A0A2N9EEF1_FAGSY	4.4e-91	62.75	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5229 PE=4 SV=1	[more]
tr\|A0A1R3K0L3\|A0A1R3K0L3_9ROSI	4.4e-91	64.12	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12497 PE=4 SV=1	[more]
tr\|A0A061E205\|A0A061E205_THECC	1.3e-90	63.67	Spindle and kinetochore-associated protein 1 isoform 1 OS=Theobroma cacao OX=364...	[more]
tr\|A0A1R3I7S5\|A0A1R3I7S5_COCAP	2.9e-90	63.79	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14316 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0051301	cell division
GO:0007059	chromosome segregation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008017	microtubule binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009829	SKA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0008017	microtubule binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05042-RA	Carg05042-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..69
None	No IPR available	GENE3D	G3DSA:1.10.10.1890		coord: 227..291 e-value: 1.1E-13 score: 53.2 coord: 146..226 e-value: 3.9E-14 score: 54.6
IPR009829	Spindle and kinetochore-associated protein 1	PFAM	PF07160	SKA1	coord: 20..206 e-value: 5.4E-48 score: 163.8 coord: 230..285 e-value: 5.7E-21 score: 75.3
IPR009829	Spindle and kinetochore-associated protein 1	PANTHER	PTHR28573	FAMILY NOT NAMED	coord: 9..291

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05042	Cla014947	Watermelon (97103) v1	carwmB0079
Carg05042	MELO3C021033	Melon (DHL92) v3.5.1	carmeB0083
Carg05042	ClCG09G008930	Watermelon (Charleston Gray)	carwcgB0080
Carg05042	CmaCh08G002190	Cucurbita maxima (Rimu)	carcmaB0112
Carg05042	CmoCh08G002190	Cucurbita moschata (Rifu)	carcmoB0119
Carg05042	Lsi02G020910	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05042	Cp4.1LG17g11020	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05042	MELO3C021033.2	Melon (DHL92) v3.6.1	carmedB0084
Carg05042	Cla97C09G171730	Watermelon (97103) v2	carwmbB0085

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05042	Cucumber (Gy14) v2	carcgybB0095
Carg05042	Cucumber (Gy14) v1	carcgyB0093
Carg05042	Cucurbita maxima (Rimu)	carcmaB0104
Carg05042	Cucurbita moschata (Rifu)	carcmoB0112
Carg05042	Cucurbita pepo (Zucchini)	carcpeB0116
Carg05042	Wild cucumber (PI 183967)	carcpiB0099
Carg05042	Cucumber (Chinese Long) v2	carcuB0095
Carg05042	Cucumber (Chinese Long) v3	carcucB0102