Carg04880 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04880
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BRO1 domain containing protein
Location	Cucurbita_argyrosperma_scaffold_028 : 1465334 .. 1467257 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCACTTCTTAGGGTTTTTCTTTCTCTGTTTTGAAGATTGGCTTATTCTGAATTGAGAATTGCTGGAGCTCCAGTGTTTGATGGTGAGTTTGTTGTCTGTGTTCATATGTTCATTTCCTTGCGCGTGATTTTCATTTGTGCTGTTTTTGGAAGATATGAAAACCGTGTGAAACAGAGACGAAGTCTTCAATTCTGGATACTGGATGTTTTCTTGGAATTCAGAACTTCATCTCTTCATTTTGATGTATTCTGCATAGGTTTTTTTTTTAGGCGCCTTCGTTTCATTCTGTTTTTTTAAAATTTGTTTGCGGTTCCTTTCCTGAGTTCGAGTTCGAGTTTTGCATTTCCATGTGTTTGTGAATTTGTTTGTGTTTGAACCTGTCAATTCTCAATTATCGGCAATTTTCTGGTTTTTCTTATTTCACGCTCTCTGTTCTGTTTCTGTTTGTTCTACTTTCATGTCCTGTATTTATGTGTCTTCTTTTGAATTTCAATTCTCAATTACGGCATGGTTCCTCGTCAATACAAGAGACGCTTCAATAGAGAAAAAGAGGATGATTATACTTGTTAGCTTAACTTTGCTTTTCTCCAACTGTTGCTTGAGCTTGCCTGAATTTCCTTTACTCGCAATCTTTTTAGAAGATTTTGCTCCTCCTTTTAGAAGCTTCTTTCATTTTGTTACTTTTTCTGTAGGTTTCCGAAGTTTGTGCTACTAATATTCCGTGTTTTTCACATTTTTCGCTTTTAAACTATGTACTTGCAGGATCGGTGCAAGAGGAGGAATCCGCGCTTTCTGAGTAAATCAATGCGTCCTTGCTAGCTCATCGTCGCCTATATATTCTTATTGTTGTTACAAGAAAAAGAACGGTAGGTATTAGAAAAAAGTTGCGAAAGGCATCTGTTGTGTCTCATTCTTTTCATGTGACTCTTGCATTTCTTTTGATCTAAGCTATTTACTAGTATCGTCTTTTTATATCCGTTGAATCAATTTTGTTAAGAATCTGCCAGAAGTTTGACTGATTGATAAACCATCTGATTAGTGACCGATTGAGCACGGATTTATATTTCATTTCTTGCAATTAATAAGTTGATTTTTGGTAAAAAAAGGTAATGACGAACGAAGACGAAGAACTATTTAGTAGGAAGGAAAGGACTGACACTAAAATTTGTGGACAATTTTAAGAGTGACTTGTATTACTCGTGAATAGCCTACTACTTCTGCTTTGTTAGTTGGCATTTATTTATTTATATATCTGCTTTTTTTGTTGCCAACTGGCAACCGCTCTTGTGAAATTTATGTTTTATTTCTTCATCGAATTTTCTTCATCAGCTCATTTGTCGTAGTTTTTTTTTTTTAATCTATTCCTGGACTAGTTTGATGAATTGGTACTTATATACCATATGAATATATAAAATGCCTAAAAGTTCAGAGTAATTGAGAACCATTGACATTGTGTGGGCAGAAATTTCATATCTGGGGATATGGGATGCCTTGCTTCAAAACCGGCAGATTCTGGTGGAAACAGGCGGAGGCCGGGAAACATTGGGGAAGTTTCTGTCTATGTTCCTGGTCTGCGTATTCCTAAACCAGTAGATTTCTCTTTGGCACTTGGCGATCATCTCTCTAAAAATATAGTTGAACGTCTATCAGCTTTGAGGACTCGTATAGTTGTAATGGCTGGCCAAGAAGGTCCAACAATTACTAGAACGCGGAGAAAAACTGCTACCCAACATGGTCAGTAATGAAAATGGTTTGTCCTCTTTAAAGCTATGTGTATTTTATCTTCTTTGCATTTGATTCACCAGATGCTACTGTTATCTTTAGGTGGTTCAACAATAGCTGATCTTCAGCAGGCTCTGGAAGATTATTTGCCTGTTCTTTTGGGATTAGTTAAAGATGGTAAGCGGGATTTTGACTGA

mRNA sequence

ATGATTCACTTCTTAGGATTGGCTTATTCTGAATTGAGAATTGCTGGAGCTCCAGTGTTTGATGGATCGGTGCAAGAGGAGGAATCCGCGCTTTCTGAAAATTTCATATCTGGGGATATGGGATGCCTTGCTTCAAAACCGGCAGATTCTGGTGGAAACAGGCGGAGGCCGGGAAACATTGGGGAAGTTTCTGTCTATGTTCCTGGTCTGCGTATTCCTAAACCAGTAGATTTCTCTTTGGCACTTGGCGATCATCTCTCTAAAAATATAGTTGAACGTCTATCAGCTTTGAGGACTCGTATAGTTGTAATGGCTGGCCAAGAAGGTCCAACAATTACTAGAACGCGGAGAAAAACTGCTACCCAACATGGTGGTTCAACAATAGCTGATCTTCAGCAGGCTCTGGAAGATTATTTGCCTGTTCTTTTGGGATTAGTTAAAGATGGTAAGCGGGATTTTGACTGA

Coding sequence (CDS)

ATGATTCACTTCTTAGGATTGGCTTATTCTGAATTGAGAATTGCTGGAGCTCCAGTGTTTGATGGATCGGTGCAAGAGGAGGAATCCGCGCTTTCTGAAAATTTCATATCTGGGGATATGGGATGCCTTGCTTCAAAACCGGCAGATTCTGGTGGAAACAGGCGGAGGCCGGGAAACATTGGGGAAGTTTCTGTCTATGTTCCTGGTCTGCGTATTCCTAAACCAGTAGATTTCTCTTTGGCACTTGGCGATCATCTCTCTAAAAATATAGTTGAACGTCTATCAGCTTTGAGGACTCGTATAGTTGTAATGGCTGGCCAAGAAGGTCCAACAATTACTAGAACGCGGAGAAAAACTGCTACCCAACATGGTGGTTCAACAATAGCTGATCTTCAGCAGGCTCTGGAAGATTATTTGCCTGTTCTTTTGGGATTAGTTAAAGATGGTAAGCGGGATTTTGACTGA

Protein sequence

MIHFLGLAYSELRIAGAPVFDGSVQEEESALSENFISGDMGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRTRIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKRDFD

Homology

[Close]

BLAST of Carg04880 vs. NCBI nr
Match: XP_022923662.1 (uncharacterized protein LOC111431305 [Cucurbita moschata])

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT
Sbjct: 1   MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. NCBI nr
Match: XP_023520253.1 (uncharacterized protein LOC111783557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT
Sbjct: 1   MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. NCBI nr
Match: XP_023001786.1 (uncharacterized protein LOC111495822 [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIP+PVDFSLALGDHLSKNIVERLSALRT
Sbjct: 1   MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPRPVDFSLALGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. NCBI nr
Match: XP_011651068.1 (PREDICTED: uncharacterized protein LOC101207897 [Cucumis sativus] >XP_011651071.1 PREDICTED: uncharacterized protein LOC101207897 [Cucumis sativus] >XP_011651078.1 PREDICTED: uncharacterized protein LOC101207897 [Cucumis sativus] >KGN64222.1 hypothetical protein Csa_1G043250 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCLASKPAD+GGNRRRPGNIGEVSVYVPGLRIPKPVDFSL LGDHLSKNIVERLSALRT
Sbjct: 1   MGCLASKPADNGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLTLGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RI+VMAGQEGPTITRTRRKTATQHGGST+ADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIIVMAGQEGPTITRTRRKTATQHGGSTLADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. NCBI nr
Match: XP_022955110.1 (uncharacterized protein LOC111457176 isoform X2 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCL SKPADSGGNRRRPGNIGE+SVYVPGLRIPKPVDFSL LGDHLSKN+VERLSALRT
Sbjct: 1   MGCLVSKPADSGGNRRRPGNIGELSVYVPGLRIPKPVDFSLTLGDHLSKNLVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RIVVMAGQEGPTITRTRRKTATQHGGST+ADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIVVMAGQEGPTITRTRRKTATQHGGSTLADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. TAIR10
Match: AT1G73390.1 (Endosomal targeting BRO1-like domain-containing protein)

HSP 1 Score: 174.5 bits (441), Expect = 5.1e-44
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC AS+P D+GGNRR+P +IG+VSVYVPGLRIPKPV+FS +LGD L K +VERL+ALRT
Sbjct: 1   MGCFASRPNDTGGNRRKPTSIGDVSVYVPGLRIPKPVEFSQSLGDQLPKTLVERLTALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG 150
           RIVVMA QEGPTITRTRRK  TQHGGST+ADL  ALEDY+PVLLGL KDG
Sbjct: 61  RIVVMANQEGPTITRTRRK--TQHGGSTLADLHHALEDYIPVLLGLTKDG 108

[Close]

BLAST of Carg04880 vs. TAIR10
Match: AT1G17940.1 (Endosomal targeting BRO1-like domain-containing protein)

HSP 1 Score: 167.5 bits (423), Expect = 6.3e-42
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC AS P DSGGNRR+P +IGEVSVYVPGLRIP+ VDF  +LGD L K +VERL+ALRT
Sbjct: 1   MGCFASTPKDSGGNRRKPTSIGEVSVYVPGLRIPRAVDFLQSLGDQLPKTLVERLTALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG 150
           RIVVMA QEGPTITRTRRK  TQHGGST+ DL QAL DYLPV+LGL KDG
Sbjct: 61  RIVVMANQEGPTITRTRRK--TQHGGSTLLDLHQALLDYLPVVLGLTKDG 108

[Close]

BLAST of Carg04880 vs. TAIR10
Match: AT5G14020.1 (Endosomal targeting BRO1-like domain-containing protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06
Identity = 36/111 (32.43%), Postives = 51/111 (45.95%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC  S  A   G + +   I E  V+V   R+P   D    L     K  + RL+ LR 
Sbjct: 1   MGCAQSTIA-VVGRKNKKRIIQESVVFVLQFRVPVQSDLQRQLKGVSPKTTINRLTCLRN 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGK 151
           +I ++               A   GGS I++L+ ALE+YL +L GL+K  K
Sbjct: 61  QIELV---------------AEDTGGSAISELRTALEEYLSLLSGLIKKSK 95

[Close]

BLAST of Carg04880 vs. TrEMBL
Match: tr|A0A0A0LTW5|A0A0A0LTW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043250 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.3e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCLASKPAD+GGNRRRPGNIGEVSVYVPGLRIPKPVDFSL LGDHLSKNIVERLSALRT
Sbjct: 1   MGCLASKPADNGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLTLGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RI+VMAGQEGPTITRTRRKTATQHGGST+ADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIIVMAGQEGPTITRTRRKTATQHGGSTLADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. TrEMBL
Match: tr|A0A1S3AT88|A0A1S3AT88_CUCME (uncharacterized protein LOC103482636 OS=Cucumis melo OX=3656 GN=LOC103482636 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-52
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGCL SKPAD+GGNRRRPGNIGEV VYVPGLRIPKPVDFSL LGDHLSKNIVERLSALRT
Sbjct: 1   MGCLVSKPADNGGNRRRPGNIGEVCVYVPGLRIPKPVDFSLTLGDHLSKNIVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDGKR 152
           RIVVMAGQEGPTITRTRRKTATQHGGST+ADLQQALEDYLPVLLGLVKDG +
Sbjct: 61  RIVVMAGQEGPTITRTRRKTATQHGGSTLADLQQALEDYLPVLLGLVKDGNQ 112

[Close]

BLAST of Carg04880 vs. TrEMBL
Match: tr|A0A1U8FXJ1|A0A1U8FXJ1_CAPAN (uncharacterized protein LOC107862739 OS=Capsicum annuum OX=4072 GN=LOC107862739 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.1e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC  S P ++GGNRRRPGNIGEVSV+VPGLRIPKPVDFSLALGDHLSK +VERLSALRT
Sbjct: 1   MGCFVSTPQETGGNRRRPGNIGEVSVFVPGLRIPKPVDFSLALGDHLSKTLVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG 150
           RIVVMAGQE PTITRTRRKTATQHGGST+ADL QALEDYLPVLLGLVKDG
Sbjct: 61  RIVVMAGQEAPTITRTRRKTATQHGGSTLADLLQALEDYLPVLLGLVKDG 110

[Close]

BLAST of Carg04880 vs. TrEMBL
Match: tr|A0A2G3AW53|A0A2G3AW53_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32634 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.1e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC  S P ++GGNRRRPGNIGEVSV+VPGLRIPKPVDFSLALGDHLSK +VERLSALRT
Sbjct: 1   MGCFVSTPQETGGNRRRPGNIGEVSVFVPGLRIPKPVDFSLALGDHLSKTLVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG 150
           RIVVMAGQE PTITRTRRKTATQHGGST+ADL QALEDYLPVLLGLVKDG
Sbjct: 61  RIVVMAGQEAPTITRTRRKTATQHGGSTLADLLQALEDYLPVLLGLVKDG 110

[Close]

BLAST of Carg04880 vs. TrEMBL
Match: tr|A0A1U8FXF8|A0A1U8FXF8_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09962 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.1e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 40  MGCLASKPADSGGNRRRPGNIGEVSVYVPGLRIPKPVDFSLALGDHLSKNIVERLSALRT 99
           MGC  S P ++GGNRRRPGNIGEVSV+VPGLRIPKPVDFSLALGDHLSK +VERLSALRT
Sbjct: 1   MGCFVSTPQETGGNRRRPGNIGEVSVFVPGLRIPKPVDFSLALGDHLSKTLVERLSALRT 60

Query: 100 RIVVMAGQEGPTITRTRRKTATQHGGSTIADLQQALEDYLPVLLGLVKDG 150
           RIVVMAGQE PTITRTRRKTATQHGGST+ADL QALEDYLPVLLGLVKDG
Sbjct: 61  RIVVMAGQEAPTITRTRRKTATQHGGSTLADLLQALEDYLPVLLGLVKDG 110

The following BLAST results are available for this feature:

BLAST of Carg04880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923662.1	4.5e-54	98.21	uncharacterized protein LOC111431305 [Cucurbita moschata]	[more]
XP_023520253.1	4.5e-54	98.21	uncharacterized protein LOC111783557 [Cucurbita pepo subsp. pepo]	[more]
XP_023001786.1	1.0e-53	97.32	uncharacterized protein LOC111495822 [Cucurbita maxima]	[more]
XP_011651068.1	6.5e-53	94.64	PREDICTED: uncharacterized protein LOC101207897 [Cucumis sativus] >XP_011651071....	[more]
XP_022955110.1	2.5e-52	93.75	uncharacterized protein LOC111457176 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg04880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73390.1	5.1e-44	78.18	Endosomal targeting BRO1-like domain-containing protein	[more]
AT1G17940.1	6.3e-42	77.27	Endosomal targeting BRO1-like domain-containing protein	[more]
AT5G14020.1	7.2e-06	32.43	Endosomal targeting BRO1-like domain-containing protein	[more]

BLAST of Carg04880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg04880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTW5\|A0A0A0LTW5_CUCSA	4.3e-53	94.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043250 PE=4 SV=1	[more]
tr\|A0A1S3AT88\|A0A1S3AT88_CUCME	3.6e-52	93.75	uncharacterized protein LOC103482636 OS=Cucumis melo OX=3656 GN=LOC103482636 PE=...	[more]
tr\|A0A1U8FXJ1\|A0A1U8FXJ1_CAPAN	7.1e-48	89.09	uncharacterized protein LOC107862739 OS=Capsicum annuum OX=4072 GN=LOC107862739 ...	[more]
tr\|A0A2G3AW53\|A0A2G3AW53_CAPCH	7.1e-48	89.09	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32634 PE=4 SV=1	[more]
tr\|A0A1U8FXF8\|A0A1U8FXF8_CAPAN	7.1e-48	89.09	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09962 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038898	BROX

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04880-RA	Carg04880-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23032:SF5	SUBFAMILY NOT NAMED	coord: 40..150
IPR038898	BRO1 domain-containing protein BROX	PANTHER	PTHR23032	UNCHARACTERIZED	coord: 40..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04880	Cla008372	Watermelon (97103) v1	carwmB0385
Carg04880	Csa1G043250	Cucumber (Chinese Long) v2	carcuB0415
Carg04880	MELO3C002179	Melon (DHL92) v3.5.1	carmeB0393
Carg04880	ClCG01G014730	Watermelon (Charleston Gray)	carwcgB0380
Carg04880	CSPI01G07640	Wild cucumber (PI 183967)	carcpiB0418
Carg04880	Cucsa.122370	Cucumber (Gy14) v1	carcgyB0452
Carg04880	CmaCh18G001060	Cucurbita maxima (Rimu)	carcmaB0541
Carg04880	CmaCh13G009550	Cucurbita maxima (Rimu)	carcmaB0540
Carg04880	CmoCh18G000820	Cucurbita moschata (Rifu)	carcmoB0527
Carg04880	CmoCh13G009900	Cucurbita moschata (Rifu)	carcmoB0526
Carg04880	Lsi02G002820	Bottle gourd (USVL1VR-Ls)	carlsiB353
Carg04880	Cp4.1LG09g10900	Cucurbita pepo (Zucchini)	carcpeB0539
Carg04880	Cp4.1LG20g01750	Cucurbita pepo (Zucchini)	carcpeB0544
Carg04880	CsGy1G007490	Cucumber (Gy14) v2	carcgybB0393
Carg04880	MELO3C002179.2	Melon (DHL92) v3.6.1	carmedB0397
Carg04880	CsaV3_1G007600	Cucumber (Chinese Long) v3	carcucB0418
Carg04880	Cla97C01G013740	Watermelon (97103) v2	carwmbB0406
Carg04880	Bhi08G001125	Wax gourd	carwgoB0473

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04880	Carg06661	Silver-seed gourd	carcarB411

The following block(s) are covering this gene:

None