Carg04635 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04635
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glucan endo-1,3-beta-glucosidase-like protein 1-like
Location	Cucurbita_argyrosperma_scaffold_028 : 155055 .. 155902 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTTCCCTCTTAAACCTCCCCATTTTCTTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGTCAGTTTCTTCTCCCTCCCGATCTCTCAAATTCTCCATCGAATCTTTGTTTTTCTTTCTAGATCTGTAACTGAATCGCTCATTGATTTGATCTTTCTTGTTTCAGGCTATGGAAATTGCAGATTCCCATCTAGGTAAAAACTTTCTCCATGATCTTTAAACACCCTGTTTCGATTTAGGGAACAATTGATGTCCGTAATCAAGAAATTAATCATCAACCGTCAACGAATCTCCGACTTTAAAGCCTTTTTTTCCAGTTTTAAAGTGATCGATTTCTCTCATTTATGGCGCAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA

mRNA sequence

CTCTGTTCCCTCTTAAACCTCCCCATTTTCTTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA

Coding sequence (CDS)

ATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA

Protein sequence

MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI

Homology

[Close]

BLAST of Carg04635 vs. NCBI nr
Match: XP_022930875.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQ SGACYDAS+VQ MASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 174
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 173

[Close]

BLAST of Carg04635 vs. NCBI nr
Match: XP_022989094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 4.5e-87
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           M I+ ALFLLI  I+CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MPINFALFLLIVPILCSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           +DCSPIQ SGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPSYGNCRF
Sbjct: 61  ADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 174
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGR+S RIWVWPIAIGYLFFKIMFLI
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPIAIGYLFFKIMFLI 173

[Close]

BLAST of Carg04635 vs. NCBI nr
Match: XP_023529864.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 2.9e-86
Identity = 160/173 (92.49%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           M I+ ALFLLI LI+CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MAINFALFLLIVLILCSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           ++CSPIQ SGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  AECSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 174
           PSSSLRNGNFSSQSTSVGLGPSE+LSGSGR+SGRIWVWPIAIGY FFK+ FLI
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSENLSGSGRRSGRIWVWPIAIGYFFFKLTFLI 173

[Close]

BLAST of Carg04635 vs. NCBI nr
Match: XP_022930876.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 324.3 bits (830), Expect = 2.5e-85
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQ SGACYDAS+VQ MASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYL 166
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG +
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGLM 165

[Close]

BLAST of Carg04635 vs. NCBI nr
Match: XP_022930877.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 3.2e-85
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQ SGACYDAS+VQ MASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG 164
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG 163

[Close]

BLAST of Carg04635 vs. TAIR10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 26  IKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFA 85
           I GQ    ELWCVAKNNA+D+SLQ+A++WACG GG+DC PIQ+ G C D ++VQ MASF 
Sbjct: 31  IGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFV 90

Query: 86  FNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDL 145
           FN+Y+LK+G  D++C F N+AA+TSLNPS G C++PSS   N    +  TS+G G + D+
Sbjct: 91  FNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DM 150

Query: 146 SGSGRKSGRIWV 158
           S  GR     W+
Sbjct: 151 SRGGRPISSSWM 161

[Close]

BLAST of Carg04635 vs. TAIR10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 36  WCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGM 95
           WC+AK NA   SLQ ALD+ACG GG+DC  IQ+  ACY+ + +++ ASFAFN Y+ KH  
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKH-P 207

Query: 96  TDDSCFFQNSAAITSLNPSYGNCRFPS 123
             DSC F  +A +TS +PS G+C F S
Sbjct: 208 GSDSCNFGGAAQLTSTDPSKGSCHFSS 233

[Close]

BLAST of Carg04635 vs. TAIR10
Match: AT4G05430.1 (Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.8e-20
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 29  QGGATEL----WCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASF 88
           QG  T L    WCVA+  A  A LQ ALDWACG G  DCS I+R G CY+   + + ASF
Sbjct: 12  QGNTTFLEGTTWCVARPGATQAELQRALDWACGIGRVDCSVIERHGDCYEPDTIVSHASF 71

Query: 89  AFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSS 124
           AFN Y+  +G    +C+F  +A  T +NPSYG C + +S
Sbjct: 72  AFNAYYQTNGNNRIACYFGGTATFTKINPSYGKCSYDAS 110

[Close]

BLAST of Carg04635 vs. TAIR10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 34  ELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKH 93
           + +C+A +  D  +LQ+ALDWACG G S+CS IQ   +CY  +NV+  ASFAFN Y+ K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 94  GMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSS---QSTSVGLGPSEDLS 147
           G    SC F+  A IT+ +PS+G+C FP S  + GN +     ST V  G +   S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGSK-KVGNRTQTVVNSTEVAAGEATSRS 493

[Close]

BLAST of Carg04635 vs. TAIR10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-19
Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 36  WCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGM 95
           WCVA  +A +  LQ  LD+ACG GG+DC PIQ    CY    ++  ASFAFN Y+ K G 
Sbjct: 384 WCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDTLEAHASFAFNSYYQKKGR 443

Query: 96  TDDSCFFQNSAAITSLNPSYGNCRFPS 123
              SC+F  +A + S  P YG C FP+
Sbjct: 444 AGGSCYFGGAAYVVSQPPKYGRCEFPT 470

[Close]

BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9M2K6|PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 3.0e-34
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 26  IKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFA 85
           I GQ    ELWCVAKNNA+D+SLQ+A++WACG GG+DC PIQ+ G C D ++VQ MASF 
Sbjct: 31  IGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFV 90

Query: 86  FNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDL 145
           FN+Y+LK+G  D++C F N+AA+TSLNPS G C++PSS   N    +  TS+G G + D+
Sbjct: 91  FNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DM 150

Query: 146 SGSGRKSGRIWV 158
           S  GR     W+
Sbjct: 151 SRGGRPISSSWM 161

[Close]

BLAST of Carg04635 vs. Swiss-Prot
Match: sp|O65399|E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 34  ELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKH 93
           + +C+A +  D  +LQ+ALDWACG G S+CS IQ   +CY  +NV+  ASFAFN Y+ K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 94  GMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSS---QSTSVGLGPSEDLS 147
           G    SC F+  A IT+ +PS+G+C FP S  + GN +     ST V  G +   S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGSK-KVGNRTQTVVNSTEVAAGEATSRS 493

[Close]

BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9C7U5|E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 25  SIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASF 84
           S+       + +C A+  AD   LQ+ALDWACG G  DCSPI++   CY+  NV   A++
Sbjct: 357 SVLANDTTNQTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANY 416

Query: 85  AFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSED 144
           AF+ Y+ + G   D+C F   A+IT+ +PS+G C F  S  R    +  S ++    +  
Sbjct: 417 AFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFAGS--RGNGRNGTSVNITAPSANS 476

Query: 145 LSGSGRKSGRIW---VWPI 161
            + SG +S   +   +W I
Sbjct: 477 TTSSGIRSDLYYSRGIWSI 493

[Close]

BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9M069|E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 17  SAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDAS 76
           S++  Q PS K        WCV K  A +  LQ++LDWACG  G DC  IQ  GAC++ +
Sbjct: 348 SSSSSQTPSGKVTSSG---WCVPKKGATNEELQASLDWACG-HGIDCGAIQPGGACFEPN 407

Query: 77  NVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFP 122
           NV + A++A N YF K       C F  +A +TS NPSY NC +P
Sbjct: 408 NVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYP 448

[Close]

BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9SD84|PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 30  GGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDY 89
           G  +  WCV K    D+ LQ  LD+ACG  G+DC+P    G+C++  NV+   ++A N +
Sbjct: 15  GHTSASWCVCKTGLSDSVLQKTLDYACG-NGADCNPTHPKGSCFNPDNVRAHCNYAVNSF 74

Query: 90  FLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLG 141
           F K G   +SC F  +A +T+ +PSY  C FPSS+  +G+  S ST+V  G
Sbjct: 75  FQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSA--SGSSGSGSTTVTPG 122

[Close]

BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A1S3BN12|A0A1S3BN12_CUCME (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491346 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-70
Identity = 136/172 (79.07%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEP-QHPSIKGQ-GGATELWCVAKNNADDASLQSALDWACGA 60
           M I+ +LFLLI LI C+AA+P + PSI+ Q G ATELWCVAKNNADDASLQSALDWACGA
Sbjct: 1   MPINFSLFLLILLIPCTAADPWRRPSIRDQSGAATELWCVAKNNADDASLQSALDWACGA 60

Query: 61  GGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNC 120
           GG+DCSPIQ  G+CYDA++VQNMASFAFNDYF KHGMTDDSCFFQNSAAITSLNPS+GNC
Sbjct: 61  GGADCSPIQPGGSCYDATDVQNMASFAFNDYFRKHGMTDDSCFFQNSAAITSLNPSFGNC 120

Query: 121 RFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIM 171
           RFPSS LRNGNFSSQ+TSVGLGPSED+SGS    GR WVWP+ IGYL  +IM
Sbjct: 121 RFPSSVLRNGNFSSQTTSVGLGPSEDMSGSAHNLGRAWVWPMVIGYLLLRIM 172

[Close]

BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0A0KHV2|A0A0A0KHV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G420530 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.8e-69
Identity = 133/171 (77.78%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQ-GGATELWCVAKNNADDASLQSALDWACGAG 60
           M I  +LFLLI LI C+A  P  PSI+ Q   A+ELWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MPIGFSLFLLILLIPCTAPHPSRPSIRDQSAAASELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCR 120
           G+DCSPIQ  G+CYD+++VQNMASFAFNDYF KHGMTDDSCFFQNSAAITSLNPS+GNCR
Sbjct: 61  GADCSPIQPGGSCYDSTDVQNMASFAFNDYFRKHGMTDDSCFFQNSAAITSLNPSFGNCR 120

Query: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIM 171
           FPSS LRNGNFSSQ+TSVG+ PSEDLSGS R SGR WVWP+ IGYLF + M
Sbjct: 121 FPSSVLRNGNFSSQTTSVGIEPSEDLSGSPRTSGRAWVWPVVIGYLFLRSM 171

[Close]

BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A1S3W152|A0A1S3W152_VIGRR (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106780627 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 97/155 (62.58%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 9   LLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQR 68
           L+++L++     P   +  G     ELWCVAKNNA+DASLQ+ALDWACGAGG+DC PIQ 
Sbjct: 7   LVLSLLLLLGFSPLIAAANGSAPPQELWCVAKNNAEDASLQAALDWACGAGGADCGPIQS 66

Query: 69  SGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSL-RN 128
            G CYD S+VQN ASFAFNDYFLKHGMTDDSC F N+AA+TSLNPS+GNC+F S  +  N
Sbjct: 67  GGPCYDPSSVQNTASFAFNDYFLKHGMTDDSCNFNNNAAVTSLNPSFGNCKFHSGMVGSN 126

Query: 129 GNF--SSQSTSVGLGPSEDLSGSGRKSGRIWVWPI 161
           G+F  S+ S+SVGLGPSEDLSG  + S   W+WP+
Sbjct: 127 GSFSGSTPSSSVGLGPSEDLSGCRKVSWGWWLWPL 161

[Close]

BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0L9V5Z7|A0A0L9V5Z7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g093100 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 9   LLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQR 68
           L+++L++     P   +  G     ELWCVAKNNADDASLQ+ALDWACGAGG+DC PIQ 
Sbjct: 7   LVLSLLLLLGFSPLIAAANGSAPPQELWCVAKNNADDASLQAALDWACGAGGADCGPIQS 66

Query: 69  SGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSL-RN 128
            G CYD S+VQN ASFAFNDYFLKHGMTDDSC F N+AA+TSLNPS+GNC+F S  +  N
Sbjct: 67  GGPCYDPSSVQNTASFAFNDYFLKHGMTDDSCNFNNNAAVTSLNPSFGNCKFHSGMVGSN 126

Query: 129 GNF--SSQSTSVGLGPSEDLSGSGRKSGRIWVWPI 161
           G+F  S+ S+SVGLGPSEDLSG  + S   W+W +
Sbjct: 127 GSFAGSTPSSSVGLGPSEDLSGCRKVSWGWWLWSL 161

[Close]

BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0S3SB55|A0A0S3SB55_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G120700 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 9   LLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQR 68
           L+++L++     P   +  G     ELWCVAKNNADDASLQ+ALDWACGAGG+DC PIQ 
Sbjct: 7   LVLSLLLLLGFSPLIAAANGSAPPQELWCVAKNNADDASLQAALDWACGAGGADCGPIQS 66

Query: 69  SGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSL-RN 128
            G CYD S+VQN ASFAFNDYFLKHGMTDDSC F N+AA+TSLNPS+GNC+F S  +  N
Sbjct: 67  GGPCYDPSSVQNTASFAFNDYFLKHGMTDDSCNFNNNAAVTSLNPSFGNCKFHSGMVGSN 126

Query: 129 GNF--SSQSTSVGLGPSEDLSGSGRKSGRIWVWPI 161
           G+F  S+ S+SVGLGPSEDLSG  + S   W+W +
Sbjct: 127 GSFAGSTPSSSVGLGPSEDLSGCRKVSWGWWLWSL 161

The following BLAST results are available for this feature:

BLAST of Carg04635 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930875.1	1.5e-90	98.27	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita moschata]	[more]
XP_022989094.1	4.5e-87	93.64	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima]	[more]
XP_023529864.1	2.9e-86	92.49	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022930876.1	2.5e-85	96.97	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita moschata]	[more]
XP_022930877.1	3.2e-85	98.16	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg04635 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58100.1	1.7e-35	53.79	plasmodesmata callose-binding protein 5	[more]
AT1G29380.1	2.6e-20	52.87	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G05430.1	5.8e-20	47.47	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G11820.2	1.7e-19	43.97	O-Glycosyl hydrolases family 17 protein	[more]
AT2G05790.1	4.9e-19	47.13	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of Carg04635 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2K6\|PDCB5_ARATH	3.0e-34	53.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
sp\|O65399\|E131_ARATH	3.0e-18	43.97	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
sp\|Q9C7U5\|E132_ARATH	1.7e-16	34.53	Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 ...	[more]
sp\|Q9M069\|E137_ARATH	1.7e-16	43.81	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
sp\|Q9SD84\|PDCB2_ARATH	2.2e-16	40.54	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]

BLAST of Carg04635 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BN12\|A0A1S3BN12_CUCME	2.5e-70	79.07	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491346 ...	[more]
tr\|A0A0A0KHV2\|A0A0A0KHV2_CUCSA	2.8e-69	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G420530 PE=4 SV=1	[more]
tr\|A0A1S3W152\|A0A1S3W152_VIGRR	1.1e-46	62.58	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Vigna radiata var. radiata OX=39...	[more]
tr\|A0A0L9V5Z7\|A0A0L9V5Z7_PHAAN	3.3e-46	62.58	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g093100 PE...	[more]
tr\|A0A0S3SB55\|A0A0S3SB55_PHAAN	3.3e-46	62.58	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04635-RA	Carg04635-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 35..120 e-value: 3.3E-40 score: 149.6
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 35..106 e-value: 1.3E-18 score: 67.3
None	No IPR available	PANTHER	PTHR32227:SF98	GB\|AAD30228.1	coord: 10..123
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 10..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04635	Cla016276	Watermelon (97103) v1	carwmB0380
Carg04635	Csa6G420530	Cucumber (Chinese Long) v2	carcuB0421
Carg04635	MELO3C014428	Melon (DHL92) v3.5.1	carmeB0397
Carg04635	ClCG09G011290	Watermelon (Charleston Gray)	carwcgB0378
Carg04635	CSPI06G22550	Wild cucumber (PI 183967)	carcpiB0425
Carg04635	Cucsa.185010	Cucumber (Gy14) v1	carcgyB0453
Carg04635	CmaCh19G010390	Cucurbita maxima (Rimu)	carcmaB0547
Carg04635	CmaCh11G019260	Cucurbita maxima (Rimu)	carcmaB0537
Carg04635	CmoCh11G020070	Cucurbita moschata (Rifu)	carcmoB0523
Carg04635	Lsi11G016820	Bottle gourd (USVL1VR-Ls)	carlsiB352
Carg04635	Cp4.1LG04g02500	Cucurbita pepo (Zucchini)	carcpeB0547
Carg04635	Cp4.1LG15g08460	Cucurbita pepo (Zucchini)	carcpeB0541
Carg04635	MELO3C014428.2	Melon (DHL92) v3.6.1	carmedB0401
Carg04635	CsaV3_6G037660	Cucumber (Chinese Long) v3	carcucB0423
Carg04635	Cla97C09G174020	Watermelon (97103) v2	carwmbB0418

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04635	Carg15717	Silver-seed gourd	carcarB415

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04635	Silver-seed gourd	carcarB031
Carg04635	Cucumber (Gy14) v2	carcgybB0398
Carg04635	Cucumber (Gy14) v2	carcgybB0399
Carg04635	Cucurbita maxima (Rimu)	carcmaB0548
Carg04635	Cucurbita maxima (Rimu)	carcmaB0549
Carg04635	Cucurbita moschata (Rifu)	carcmoB0532
Carg04635	Cucurbita moschata (Rifu)	carcmoB0533
Carg04635	Cucurbita moschata (Rifu)	carcmoB0534
Carg04635	Cucurbita pepo (Zucchini)	carcpeB0542
Carg04635	Cucurbita pepo (Zucchini)	carcpeB0549
Carg04635	Wild cucumber (PI 183967)	carcpiB0426
Carg04635	Cucumber (Chinese Long) v2	carcuB0422
Carg04635	Cucumber (Chinese Long) v3	carcucB0424
Carg04635	Bottle gourd (USVL1VR-Ls)	carlsiB351
Carg04635	Melon (DHL92) v3.5.1	carmeB0391
Carg04635	Melon (DHL92) v3.6.1	carmedB0395
Carg04635	Watermelon (Charleston Gray)	carwcgB0381
Carg04635	Watermelon (97103) v1	carwmB0382
Carg04635	Watermelon (97103) v1	carwmB0389
Carg04635	Watermelon (97103) v2	carwmbB0407
Carg04635	Watermelon (97103) v2	carwmbB0416
Carg04635	Wax gourd	carwgoB0471
Carg04635	Wax gourd	carwgoB0472