Carg04465 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04465
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RNA-binding, CRM domain containing protein
Location	Cucurbita_argyrosperma_scaffold_032 : 559606 .. 562824 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGAATGGAGATGAGCGATTGATCGTCATCTCTTCCATTCATCAATGTTTTCTGCTACTCGAAGGCTCTGTTTTACTAGGGTTTCTACTCTCCTTCTATCAAATCGCTACAAGTATCGTCTCTCTCTCTCCCTCGCTCTCTTTCCGTTGCATTTGGTTGCTGGGTGCTGTGAATTAGGTTTTGTTTCCATGTTGTGGCTTCAGTTATAGAGTCTCAGGGGAGCCAGTTTGGCGCTTCGTCTCTCCGGCAGTCATTCAATCATCAATTCCTTTTTTTATAATCGATTTGATTGCTTCCTATATTTTCTTTGAGAACCCTAATGAATTTCCTCTCTTTCGGTTTTCTAGTGTGTTTTCTTTTCCCTTGTTAAGAAATTTATACATTTTTTTAAAAAACTCGCTTTCTCCTTAAGTCTATGCTATTATTGTTTTTTCATTCCCTTTGATGAACTGCGTTAAAAAAGTGCATCCATTCTGCTATTGCTTATGGAATTCACCACTCTTAGAAAAAGATCATGATTTTACTTGTTAGATATGACGCTCTTTCATAGTTGAATCTGCTCAGGAAATATATGACATTATTTAACTTCGTTTGCACTGCTTCTCTCATTTGCCAAGTATCCAATTGAATGCATACTTTTATTCTGTGGGTGCTGTTCCTCAGCACGTATCCAAGGCATTTAGATGTAATAATAGCATCCACTTTGTTCAATGCAGTTTGAACAAAGATTCTGATAGGATATAATTTTTTTTTTTTTAAATGTGTGCAGCAATGTCGTATCATTAGCAGATTTTCACTCAGAGATTGCTTCAAGCAATGTGGCCCTTAGAAGCATTCGTAGTGAATATGTATTTCCTTCTAAATCAAAGGTTGTTGGTTCTTTCAATGGGTTGTCCCGTTGTATGTCGACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGGAGAATGAGGAAAGAGTCTGGTAAGACCTTAAGGGAGATCCGAAGAGCTAAGAAAATTAAGAAAAAGCTGATGACAGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGTATGCCATTTCGAAGTTATAATCTATGTTGTTGATTTTGATGACATACTTACATCTGTTTTTAATCTTGATGAATATTGTGATTGAAGAGATATTTTATGAATTATAGCCTTCTCTGGGAAATCTGAATTTGACATTTGATGTTCAATTTAAGTCACTATACTGCTGCCTTTGTTTTAAATAAAAACATAATTCTACACCCACACAATTTAAATTTGATTGATTAGTATGACCACATTTGTATCATATCTTTCGTAGGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTCAAGAAGTATGAGCTCCCAGAGTTGCCACCCCCTCGTCATGACCCAGAGCTCCTGACCCCTGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAGAATTACGTCCCAGTTGGTGTCCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTCCATTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAATCATGCTTGCAAGACTTAGCGGTGGAATTGTCGTGAATGTACATAACGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCAATCAACACCCTTACTAAGAGAAAGGTACGCATGCTGGATCACAGTGTTTGTTCTCTCAGTTTCTTTGCCTTGTTTTTAAAAATAAGTACGTCTTTTGGGTTGCTCCCCCCCACCCCACCCACACACACACACACCCCCCATATTTCTTGAAAAGGGATAGGCTGAATTTTTGTCCCTTAATTTTATGGCGAACTTCATTCTGTATTCTTTTGAAAGCTTGGTTTTAGATCTTAACTCTTTCCTAGCCACTATGTTAGTCCCTTTGGTGAAACTGACTAGATGTGATTGAATAAACTGACTAACTAGATTTGGTGGAAATTATTTCTTCCATTGGGTGAATGGAGATCATAATTAATGTGGTAGGATAAAGGAAGTCAAGAAAACAGTAGAATAACAGTTGTTTGTTCTCTTACGTAGGCGTTATTCAAGGCCAGATTTGAACAAGCTCTCGATTCTCAGAAGCTAAACATAAAGAAGATAGAACAAGAGCTCAGACGTAAGGGTATAAACCCAGAGGATCCAGTTGCTATGGCCAGCATCCAGAGAGTAGCTTCAACATTTTTTAATGCCATTGACAAAAAAGAAGGTACCCCGTATGTCTTCTACGGTGATAAGCAGACAGCGACAGAGATCGAGCGTAACATGGAAGAAGAGGAATCTCATAGTGACAGTGACCAGGAAGAGTTAGACAGATTCATAGCTGAGATAGAGGATGCAGCAGATCGAGATTGGGTTGCTGAGGAAGCAGCAGAGAAAGAAGAGCTTAGCCAAATTAGGTATAGGAATAGAGAAGAACACGGTGGGAGATTAAGAAAATCCGATATGCGTACAAATAACAGTTCTGATGACGAGATTGAAAAGCCAAGTGTTTGGAGACAGCGAGATAGTAAGCAAAGATTATACGATAGTGAAGAGGAAGATGATGAACACGCAAATGAGGAATGGGATTCTGATGATGGTCAGAATGCTAACGATCTTGACAGCGATGCAGATGATTCTGATGGAGCTCATGGGATCGTCAAAACGACTCGAGGAGCTGGAGGGAGGCATGATTTGGCCAAAAATAGAAGTTTTAAGAGAAATGTCGAGCCCTTTGTCAGAAAAAGGATGGATTCAGAAGGTTCTGAGCCTGAAACTATGCTTAGTGATCTTGAAAGTGCCATGTGGCAATCAGAAGAAGAGGAAGAAGACGAAGAAGATGACATGAAAGTTTTAAGCTGCGCAAATGATGATTACAGGAGCAATGAAGTTGATTTGCATCACATCAAGAAAGATAAGAAGAATAATAAGCTGAATGATTATGACTCTAGCATTGATGAATCCAATGAAGCTTATGAACACACAGACACTAAAAGAAAGGAGAATAGAATGAGAAAATCGAAGAATAGTTACAACTTTGTATCAAAAAATACTGATTCAGGAAAGGCATTGTGGGATTCAGACGAAGAAGATGAATCAGGGACATCAAGACCGCAGAGACACGATTACTGGAGTGGTAGTGATGAAGATGATTCTCGTAGAAAATAG

mRNA sequence

TAGGAATGGAGATGAGCGATTGATCGTCATCTCTTCCATTCATCAATGTTTTCTGCTACTCGAAGGCTCTGTTTTACTAGGGTTTCTACTCTCCTTCTATCAAATCGCTACAACAATGTCGTATCATTAGCAGATTTTCACTCAGAGATTGCTTCAAGCAATGTGGCCCTTAGAAGCATTCGTAGTGAATATGTATTTCCTTCTAAATCAAAGGTTGTTGGTTCTTTCAATGGGTTGTCCCGTTGTATGTCGACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGGAGAATGAGGAAAGAGTCTGGTAAGACCTTAAGGGAGATCCGAAGAGCTAAGAAAATTAAGAAAAAGCTGATGACAGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTCAAGAAGTATGAGCTCCCAGAGTTGCCACCCCCTCGTCATGACCCAGAGCTCCTGACCCCTGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAGAATTACGTCCCAGTTGGTGTCCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTCCATTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAATCATGCTTGCAAGACTTAGCGGTGGAATTGTCGTGAATGTACATAACGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCAATCAACACCCTTACTAAGAGAAAGGCGTTATTCAAGGCCAGATTTGAACAAGCTCTCGATTCTCAGAAGCTAAACATAAAGAAGATAGAACAAGAGCTCAGACGTAAGGGTATAAACCCAGAGGATCCAGTTGCTATGGCCAGCATCCAGAGAGTAGCTTCAACATTTTTTAATGCCATTGACAAAAAAGAAGGTACCCCGTATGTCTTCTACGGTGATAAGCAGACAGCGACAGAGATCGAGCGTAACATGGAAGAAGAGGAATCTCATAGTGACAGTGACCAGGAAGAGTTAGACAGATTCATAGCTGAGATAGAGGATGCAGCAGATCGAGATTGGGTTGCTGAGGAAGCAGCAGAGAAAGAAGAGCTTAGCCAAATTAGGTATAGGAATAGAGAAGAACACGGTGGGAGATTAAGAAAATCCGATATGCGTACAAATAACAGTTCTGATGACGAGATTGAAAAGCCAAGTGTTTGGAGACAGCGAGATAGTAAGCAAAGATTATACGATAGTGAAGAGGAAGATGATGAACACGCAAATGAGGAATGGGATTCTGATGATGGTCAGAATGCTAACGATCTTGACAGCGATGCAGATGATTCTGATGGAGCTCATGGGATCGTCAAAACGACTCGAGGAGCTGGAGGGAGGCATGATTTGGCCAAAAATAGAAGTTTTAAGAGAAATGTCGAGCCCTTTGTCAGAAAAAGGATGGATTCAGAAGGTTCTGAGCCTGAAACTATGCTTAGTGATCTTGAAAGTGCCATGTGGCAATCAGAAGAAGAGGAAGAAGACGAAGAAGATGACATGAAAGTTTTAAGCTGCGCAAATGATGATTACAGGAGCAATGAAGTTGATTTGCATCACATCAAGAAAGATAAGAAGAATAATAAGCTGAATGATTATGACTCTAGCATTGATGAATCCAATGAAGCTTATGAACACACAGACACTAAAAGAAAGGAGAATAGAATGAGAAAATCGAAGAATAGTTACAACTTTGTATCAAAAAATACTGATTCAGGAAAGGCATTGTGGGATTCAGACGAAGAAGATGAATCAGGGACATCAAGACCGCAGAGACACGATTACTGGAGTGGTAGTGATGAAGATGATTCTCGTAGAAAATAG

Coding sequence (CDS)

ATGTTTTCTGCTACTCGAAGGCTCTGTTTTACTAGGGTTTCTACTCTCCTTCTATCAAATCGCTACAACAATGTCGTATCATTAGCAGATTTTCACTCAGAGATTGCTTCAAGCAATGTGGCCCTTAGAAGCATTCGTAGTGAATATGTATTTCCTTCTAAATCAAAGGTTGTTGGTTCTTTCAATGGGTTGTCCCGTTGTATGTCGACATCGAAGGGAAGGAGTATGCGTAGTAAGGTGGAGAGGAGAATGAGGAAAGAGTCTGGTAAGACCTTAAGGGAGATCCGAAGAGCTAAGAAAATTAAGAAAAAGCTGATGACAGAGGAAGAAAGGCTCCTTTACAACCTCAAAAGAGCCAAGAAGAAAGTAGCATTACTTTTACAACAACTCAAGAAGTATGAGCTCCCAGAGTTGCCACCCCCTCGTCATGACCCAGAGCTCCTGACCCCTGAACAGCTTCAAGCTTATAAAAAAATAGGCTTTAGAAATAAGAATTACGTCCCAGTTGGTGTCCGTGGAGTGTTTGGAGGAGTGGTCCAGAATATGCATCTCCATTGGAAGTTTCATGAGACTGTGCAAGTGTGTTGTGATAACTTCCCCAAAGAAAAAATCAAGGAAATGGCAATCATGCTTGCAAGACTTAGCGGTGGAATTGTCGTGAATGTACATAACGTGAAAACAATCATCATGTTTCGTGGAAGAAACTATCGTCAACCTAAAAATTTGATACCAATCAACACCCTTACTAAGAGAAAGGCGTTATTCAAGGCCAGATTTGAACAAGCTCTCGATTCTCAGAAGCTAAACATAAAGAAGATAGAACAAGAGCTCAGACGTAAGGGTATAAACCCAGAGGATCCAGTTGCTATGGCCAGCATCCAGAGAGTAGCTTCAACATTTTTTAATGCCATTGACAAAAAAGAAGGTACCCCGTATGTCTTCTACGGTGATAAGCAGACAGCGACAGAGATCGAGCGTAACATGGAAGAAGAGGAATCTCATAGTGACAGTGACCAGGAAGAGTTAGACAGATTCATAGCTGAGATAGAGGATGCAGCAGATCGAGATTGGGTTGCTGAGGAAGCAGCAGAGAAAGAAGAGCTTAGCCAAATTAGGTATAGGAATAGAGAAGAACACGGTGGGAGATTAAGAAAATCCGATATGCGTACAAATAACAGTTCTGATGACGAGATTGAAAAGCCAAGTGTTTGGAGACAGCGAGATAGTAAGCAAAGATTATACGATAGTGAAGAGGAAGATGATGAACACGCAAATGAGGAATGGGATTCTGATGATGGTCAGAATGCTAACGATCTTGACAGCGATGCAGATGATTCTGATGGAGCTCATGGGATCGTCAAAACGACTCGAGGAGCTGGAGGGAGGCATGATTTGGCCAAAAATAGAAGTTTTAAGAGAAATGTCGAGCCCTTTGTCAGAAAAAGGATGGATTCAGAAGGTTCTGAGCCTGAAACTATGCTTAGTGATCTTGAAAGTGCCATGTGGCAATCAGAAGAAGAGGAAGAAGACGAAGAAGATGACATGAAAGTTTTAAGCTGCGCAAATGATGATTACAGGAGCAATGAAGTTGATTTGCATCACATCAAGAAAGATAAGAAGAATAATAAGCTGAATGATTATGACTCTAGCATTGATGAATCCAATGAAGCTTATGAACACACAGACACTAAAAGAAAGGAGAATAGAATGAGAAAATCGAAGAATAGTTACAACTTTGTATCAAAAAATACTGATTCAGGAAAGGCATTGTGGGATTCAGACGAAGAAGATGAATCAGGGACATCAAGACCGCAGAGACACGATTACTGGAGTGGTAGTGATGAAGATGATTCTCGTAGAAAATAG

Protein sequence

MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGSFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTEEERLLYNLKRAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEEDDEHANEEWDSDDGQNANDLDSDADDSDGAHGIVKTTRGAGGRHDLAKNRSFKRNVEPFVRKRMDSEGSEPETMLSDLESAMWQSEEEEEDEEDDMKVLSCANDDYRSNEVDLHHIKKDKKNNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESGTSRPQRHDYWSGSDEDDSRRK

Homology

[Close]

BLAST of Carg04465 vs. NCBI nr
Match: XP_022963886.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1027.3 bits (2655), Expect = 2.1e-296
Identity = 601/621 (96.78%), Postives = 601/621 (96.78%), Query Frame = 0


Query: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGS 60
           MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSK KVVGS
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKWKVVGS 60

Query: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120
           FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300
           NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Sbjct: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300

Query: 301 FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360
           FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE
Sbjct: 301 FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360

Query: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEED 420
           EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEED
Sbjct: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEED 420

Query: 421 DEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVEPFVR 480
           D                  XXXXXXXXX HGIVKTTRGAGGRHDLAKNRSFKRNVEPFVR
Sbjct: 421 D---XXXXXXXXXXXXXXXXXXXXXXXXXHGIVKTTRGAGGRHDLAKNRSFKRNVEPFVR 480

Query: 481 KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK 540
           KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK
Sbjct: 481 KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK 540

Query: 541 NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG 600
           NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG
Sbjct: 541 NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG 600

Query: 601 TSRPQRHDYWSGSDEDDSRRK 622
           TSRPQRHDYWSGSDEDDSRRK
Sbjct: 601 TSRPQRHDYWSGSDEDDSRRK 618

[Close]

BLAST of Carg04465 vs. NCBI nr
Match: XP_023550703.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1021.9 bits (2641), Expect = 8.9e-295
Identity = 598/621 (96.30%), Postives = 599/621 (96.46%), Query Frame = 0


Query: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGS 60
           MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYV PSKSKVVGS
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVLPSKSKVVGS 60

Query: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120
           FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300
           NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Sbjct: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300

Query: 301 FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360
           FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE
Sbjct: 301 FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360

Query: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEED 420
           EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLY+SEEED
Sbjct: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYNSEEED 420

Query: 421 DEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVEPFVR 480
                              XXXXXXXXX HGIVKTTRGAGGRHD AKNRSFKRNVEPFVR
Sbjct: 421 ---XXXXXXXXXXXXXXXXXXXXXXXXXXHGIVKTTRGAGGRHDSAKNRSFKRNVEPFVR 480

Query: 481 KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK 540
           KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK
Sbjct: 481 KRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDKK 540

Query: 541 NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG 600
           NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG
Sbjct: 541 NNKLNDYDSSIDESNEAYEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEEDESG 600

Query: 601 TSRPQRHDYWSGSDEDDSRRK 622
           TSRPQRHDYWSGSDEDDSRRK
Sbjct: 601 TSRPQRHDYWSGSDEDDSRRK 618

[Close]

BLAST of Carg04465 vs. NCBI nr
Match: XP_022990655.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 904.0 bits (2335), Expect = 2.7e-259
Identity = 550/625 (88.00%), Postives = 553/625 (88.48%), Query Frame = 0


Query: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGS 60
           MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYV PSKSKVVGS
Sbjct: 1   MFSATRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVLPSKSKVVGS 60

Query: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120
           +NGLSRCMSTS+GRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  YNGLSRCMSTSRGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
           XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ
Sbjct: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240
           NMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVNVHNVKTIIMFRGRNYRQPK
Sbjct: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240

Query: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300
           NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF
Sbjct: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300

Query: 301 FNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360
           FNAIDKKEGTPYVFYGDKQT TEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE
Sbjct: 301 FNAIDKKEGTPYVFYGDKQTVTEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAE 360

Query: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEED 420
           EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLY+SEEED
Sbjct: 361 EAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYNSEEED 420

Query: 421 DEHAN-EEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVEPFV 480
           DEHAN EEW           XXXXXXXXX                     SFKRNVEPFV
Sbjct: 421 DEHANEEEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKRNVEPFV 480

Query: 481 RKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKKDK 540
           RKRMDSEGSEPETMLSDLESAMWQ XXXXXXXXXXX                        
Sbjct: 481 RKRMDSEGSEPETMLSDLESAMWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 KNNKLNDYDSSIDESNEA---YEHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEE 600
                  YDSSIDESNEA   YEH DTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEE
Sbjct: 541 XXXXXXXYDSSIDESNEAYDRYEHADTKRKENRMRKSKNSYNFVSKNTDSGKALWDSDEE 600

Query: 601 DESGTSRPQRHDYWSGSDEDDSRRK 622
           DESGTSRPQRHDYWSGSDEDDSRRK
Sbjct: 601 DESGTSRPQRHDYWSGSDEDDSRRK 625

[Close]

BLAST of Carg04465 vs. NCBI nr
Match: XP_022134259.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Momordica charantia])

HSP 1 Score: 751.9 bits (1940), Expect = 1.7e-213
Identity = 472/625 (75.52%), Postives = 507/625 (81.12%), Query Frame = 0


Query: 1   MFSA-TRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASS-NVALRSIRSEYVFPSKSKVV 60
           MFSA  RRL   RVSTLLLSNR+NNVVSL DFHS++ASS NVA RSIR EYV P  + VV
Sbjct: 1   MFSAPLRRLSSNRVSTLLLSNRFNNVVSLTDFHSDVASSCNVAHRSIRGEYVLPCTTNVV 60

Query: 61  GSFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXX 120
           G FNG+SRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GPFNGVSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV 180
           XXXXXXXXLQQLKKYELPELP PRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV
Sbjct: 121 XXXXXXXXLQQLKKYELPELPSPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGV 180

Query: 181 VQNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQ 240
           VQNMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+HNVKTIIMFRGRNYRQ
Sbjct: 181 VQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNVKTIIMFRGRNYRQ 240

Query: 241 PKNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAS 300
           PKNLIPINTLTKRKALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVAS
Sbjct: 241 PKNLIPINTLTKRKALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVAS 300

Query: 301 TFFNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWV 360
           TFFNAIDKKEGTPYVFYGDKQT T  + NM           EELDRFIAEIEDAADRDWV
Sbjct: 301 TFFNAIDKKEGTPYVFYGDKQTGTGSKINMXXXXXXXXXXXEELDRFIAEIEDAADRDWV 360

Query: 361 AEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDS-- 420
           AEEAAEKEELSQIRYRNREEHGGR R+SDMRTN+SS++E+EKP VWRQRDSKQRL+DS  
Sbjct: 361 AEEAAEKEELSQIRYRNREEHGGRFRRSDMRTNDSSENEMEKPRVWRQRDSKQRLHDSXX 420

Query: 421 EEEDDEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNV- 480
                                  XXXXXXXXX                    +SFKR+V 
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSFKRDVQ 480

Query: 481 EPFVRKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHI 540
           +PFVRKRMD+E SEPE MLSDLESAMW+S           KV    + DY+S E DLHH 
Sbjct: 481 QPFVRKRMDTEASEPENMLSDLESAMWES---DEEEEDDMKVSRYVDQDYKSKEDDLHH- 540

Query: 541 KKDKKNNKLNDYDSSIDESNEAY---EHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWD 600
            K+ +NN+LNDYDS++DES+EAY   EH DTK+K+ RM   KNSYN+   + +SG A+WD
Sbjct: 541 NKEHENNRLNDYDSNVDESDEAYDRFEHRDTKQKQARM---KNSYNY---DVNSGNAMWD 600

Query: 601 SDEEDESGTSRPQRHDYWSGSDEDD 618
           SD+E+ESG SR QR+DYWSGSDEDD
Sbjct: 601 SDDEEESGASRTQRYDYWSGSDEDD 615

[Close]

BLAST of Carg04465 vs. NCBI nr
Match: XP_004142845.1 (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Cucumis sativus] >KGN51352.1 hypothetical protein Csa_5G522980 [Cucumis sativus])

HSP 1 Score: 704.9 bits (1818), Expect = 2.4e-199
Identity = 449/624 (71.96%), Postives = 476/624 (76.28%), Query Frame = 0


Query: 1   MFSATRRLC-FTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVG 60
           M +ATRR C F+RVS LLLSNRYN+V+   D +SE  S NV  RSI  EYV PS SKVVG
Sbjct: 1   MLAATRRFCSFSRVSNLLLSNRYNSVILSTDCNSEAVSCNVGHRSIHGEYVLPSTSKVVG 60

Query: 61  SFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120
            FNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  PFNGLVRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180
           XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVV
Sbjct: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVV 180

Query: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQP 240
           QNMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+H+VKTIIMFRGRNYRQP
Sbjct: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQP 240

Query: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300
           KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Sbjct: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300

Query: 301 FFNAIDKKEGTPYVFYGDKQTA--TEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDW 360
           FFNAIDKKEGTPYVFY DKQ                        LDRFIAEIEDAADRDW
Sbjct: 301 FFNAIDKKEGTPYVFYSDKQAVXXXXXXXXXXXXXXXXXXXXXXLDRFIAEIEDAADRDW 360

Query: 361 VAEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSE 420
           VAEEAAEKEELSQ+RYRNREEHGGR RKSDMRTNN SDDE++KP VWRQRDSKQRLY+SE
Sbjct: 361 VAEEAAEKEELSQLRYRNREEHGGRFRKSDMRTNNDSDDEMDKPRVWRQRDSKQRLYNSE 420

Query: 421 EEDDEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVEP 480
           EED +H NEE +          XXXXXXXXX                    RSF+RNV+P
Sbjct: 421 EEDGDHENEE-EWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSFERNVDP 480

Query: 481 FVRKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKK 540
           F R RMD E SEPE MLSDLE+ MWQS           K+    + DY+ N         
Sbjct: 481 FAR-RMDKEASEPENMLSDLENTMWQS---DEEEEDDMKISKNVDQDYKDN-XXXXXXXX 540

Query: 541 DKKNNKLNDYDSSIDESNEAY---EHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSD 600
                     DSSIDE +E+Y   +HT                  VSK+TDSGKA+WDSD
Sbjct: 541 XXXXXXXXXXDSSIDEPDESYNKFKHTXXXXXXXXXXXXXXXXXXVSKDTDSGKAMWDSD 600

Query: 601 EEDESGTSRPQRHDYWSGSDEDDS 619
           +EDE GT RPQR+DYWSGSDED S
Sbjct: 601 DEDEKGTLRPQRYDYWSGSDEDGS 618

[Close]

BLAST of Carg04465 vs. TAIR10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 464.9 bits (1195), Expect = 7.6e-131
Identity = 243/332 (73.19%), Postives = 270/332 (81.33%), Query Frame = 0


Query: 61  FNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXX 120
           F G SR MSTS+GRSMRSKVE RMRKESGKTLREIRRA                      
Sbjct: 5   FKGWSRGMSTSRGRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAK 64

Query: 121 XXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ 180
                 LQ+LKKY+LPELP P HDPEL T EQ+QA+KKIGF+NKNYVPVGVRGVFGGVVQ
Sbjct: 65  KKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQ 124

Query: 181 NMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPK 240
           NMH+HWKFHETVQVCCDNFPKEKIKEMA M+ARLSGG+V+N+HNVKTIIMFRGRNYRQPK
Sbjct: 125 NMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPK 184

Query: 241 NLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTF 300
           NLIP+NTLTKRKALFKARFEQAL+SQKLNIKK EQ+LRR G+NPEDPVAMASI RVASTF
Sbjct: 185 NLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQLRRMGVNPEDPVAMASIHRVASTF 244

Query: 301 FNAIDKKEGTPYVFYGDKQT--ATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWV 360
           FNAIDKKEGTPYVF+GDKQ+   T ++   E E    DSDQEELDRFIAEIE+AAD++W 
Sbjct: 245 FNAIDKKEGTPYVFHGDKQSERGTSVDNREESEPGDEDSDQEELDRFIAEIEEAADKEWE 304

Query: 361 AEEAAEKEELSQIRYRNREEHGGRLRKSDMRT 391
            EEAAE+EE  +IRY NREE  GR R  ++R+
Sbjct: 305 EEEAAEQEESGRIRYWNREEFAGRSRTPELRS 336

[Close]

BLAST of Carg04465 vs. TAIR10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 142.5 bits (358), Expect = 8.7e-34
Identity = 74/152 (48.68%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 127 LQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHW 186
           +++L+KY++P+ P   +DPE LT E+    K+ G + KN+V VG RGVFGGVV N+HLHW
Sbjct: 161 IEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHW 220

Query: 187 KFHETVQVCCDNFPKE-KIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLIPI 246
           K HETV+V C    K  ++ E A  LARLS GIV++V    TI+++RG+NY +P+ + P+
Sbjct: 221 KKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPV 280

Query: 247 NTLTKRKALFKARFEQALDSQKLNIKKIEQEL 278
           +TL+K KAL K R+EQ+L+     I+K+E+EL
Sbjct: 281 DTLSKDKALEKYRYEQSLEHTSEFIEKLEKEL 312

[Close]

BLAST of Carg04465 vs. TAIR10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-33
Identity = 103/286 (36.01%), Postives = 157/286 (54.90%), Query Frame = 0


Query: 127 LQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHW 186
           ++ +KK E  E     HDPE+LTPE+   Y K+G + KNYVPVG RG++ GV+ NMHLHW
Sbjct: 156 METMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHW 215

Query: 187 KFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLI--P 246
           K H+T+QV    F  +++KE+A+ LARL+GGIV++VH   TIIM+RG+NY QP   I  P
Sbjct: 216 KKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSP 275

Query: 247 INTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAI 306
             TL ++KAL K++   AL + +  I ++EQEL+      E      +++          
Sbjct: 276 RITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVK--------VD 335

Query: 307 DKKEGTPYVFYGDKQTATEIERNMEEEES----HSDSDQEELDRFIAEIEDA-ADRDWVA 366
           D +E +  +    +++   +E   EE+E+     +DSD  ++    +E+EDA  +R    
Sbjct: 336 DNQERSEELKKIIERSEECLEDEQEEDEAGLELATDSDLSDIFETDSELEDAKTERPLFL 395

Query: 367 EEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSD-----DEIEK 401
           EE    E+   I  R  E+ G   +       N  D     DE++K
Sbjct: 396 EEF---EKFPAINNREDEDFGDLGKAKSEGEENDDDKSPNFDEVDK 430

[Close]

BLAST of Carg04465 vs. TAIR10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 139.8 bits (351), Expect = 5.6e-33
Identity = 69/151 (45.70%), Postives = 106/151 (70.20%), Query Frame = 0


Query: 127 LQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHW 186
           +++LK+YE+ ++  P   P  +T E+    KK+G +  NYVP+G RGVFGGV+ NMHLHW
Sbjct: 143 IERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHW 202

Query: 187 KFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLIPIN 246
           K HETV+V C+N    ++++ A  LA+LSGG+ VN+    TII +RG+ Y QP+ + PI+
Sbjct: 203 KKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVMSPID 262

Query: 247 TLTKRKALFKARFEQALDSQKLNIKKIEQEL 278
           TL+K++A  K+++EQ+L+S +  I   E+EL
Sbjct: 263 TLSKKRAYEKSKYEQSLESVRHFIAIAEKEL 293

[Close]

BLAST of Carg04465 vs. TAIR10
Match: AT3G18390.1 (CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-22
Identity = 56/154 (36.36%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 130 LKKYELPELP-PPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKF 189
           L K E   +P  P +D E+++ E+   ++K+G + K Y+P+G+RGVF GV++NMHLHWK 
Sbjct: 634 LSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKH 693

Query: 190 HETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVK---TIIMFRGRNYRQPKNLIPI 249
            E V++      +  ++E A +L   SGG++V +  V     +I +RG+NYR+P +L P 
Sbjct: 694 RELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPR 753

Query: 250 NTLTKRKALFKARFEQALDSQKLNIKKIEQELRR 280
           N LTK KAL ++   Q  ++   +I ++E+ + +
Sbjct: 754 NLLTKAKALKRSIAMQRHEALSQHISELERTIEQ 787

[Close]

BLAST of Carg04465 vs. Swiss-Prot
Match: sp|Q67XL4|Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 6.0e-32
Identity = 103/286 (36.01%), Postives = 157/286 (54.90%), Query Frame = 0


Query: 127 LQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHW 186
           ++ +KK E  E     HDPE+LTPE+   Y K+G + KNYVPVG RG++ GV+ NMHLHW
Sbjct: 156 METMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHW 215

Query: 187 KFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLI--P 246
           K H+T+QV    F  +++KE+A+ LARL+GGIV++VH   TIIM+RG+NY QP   I  P
Sbjct: 216 KKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSP 275

Query: 247 INTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAI 306
             TL ++KAL K++   AL + +  I ++EQEL+      E      +++          
Sbjct: 276 RITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVK--------VD 335

Query: 307 DKKEGTPYVFYGDKQTATEIERNMEEEES----HSDSDQEELDRFIAEIEDA-ADRDWVA 366
           D +E +  +    +++   +E   EE+E+     +DSD  ++    +E+EDA  +R    
Sbjct: 336 DNQERSEELKKIIERSEECLEDEQEEDEAGLELATDSDLSDIFETDSELEDAKTERPLFL 395

Query: 367 EEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSD-----DEIEK 401
           EE    E+   I  R  E+ G   +       N  D     DE++K
Sbjct: 396 EEF---EKFPAINNREDEDFGDLGKAKSEGEENDDDKSPNFDEVDK 430

[Close]

BLAST of Carg04465 vs. Swiss-Prot
Match: sp|A7XN92|CFM3_MAIZE (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=4577 GN=CFM3 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-20
Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 145 PELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 204
           PE +T E+   ++K+G R K ++ +G RGVF G ++NMHLHWK+ E V++         +
Sbjct: 581 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADV 640

Query: 205 KEMAIMLARLSGGIVVNVHNVK---TIIMFRGRNYRQPKNLIPINTLTKRKALFKA---R 264
           K +A+ L   SGGI+V+V  V     I++FRG+NYR+P +L P N L+KRKAL ++   +
Sbjct: 641 KRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQ 700

Query: 265 FEQALDSQKLNIKKIEQELRRKGINPED 287
             QAL      + +  + L+ + +  ED
Sbjct: 701 RHQALSRHFAKLNRKVERLKAELVQMED 728

[Close]

BLAST of Carg04465 vs. Swiss-Prot
Match: sp|F4J2U9|CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-20
Identity = 50/119 (42.02%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 142 RHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPK 201
           R DPE +T E+   ++K+G + K ++ +G RGVF G V+NMHLHWK+ E V++       
Sbjct: 632 REDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTF 691

Query: 202 EKIKEMAIMLARLSGGIVVNVHNVK---TIIMFRGRNYRQPKNLIPINTLTKRKALFKA 258
           + +K++A+ L   SGGI+V++  V     II++RG++Y++P  L P N LTKRKAL ++
Sbjct: 692 DGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARS 750

[Close]

BLAST of Carg04465 vs. Swiss-Prot
Match: sp|Q8L7C2|CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM2 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.4e-19
Identity = 60/160 (37.50%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 127 LQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHW 186
           L  L+  E P+L     D E +T ++    +KIG + K ++ +G RGVF G ++NMHLHW
Sbjct: 560 LADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHW 619

Query: 187 KFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVK---TIIMFRGRNYRQPKNLI 246
           K+ E V++ C+ +  E   ++A +L   SGGI+V V  V     II++RG+NY +P+ L 
Sbjct: 620 KYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLR 679

Query: 247 PINTLTKRKALFKARFEQALDSQKLNIKKIE---QELRRK 281
           P   L+KR+AL ++   Q   S KL++ K+    +EL R+
Sbjct: 680 PQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQ 717

[Close]

BLAST of Carg04465 vs. Swiss-Prot
Match: sp|Q2R1U8|CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-18
Identity = 65/211 (30.81%), Postives = 111/211 (52.61%), Query Frame = 0


Query: 145 PELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 204
           PE +T E+   ++K+G R K ++ +G RGVF G ++NMHLHWK+ E V++         +
Sbjct: 589 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDV 648

Query: 205 KEMAIMLARLSGGIVVNVHNVK---TIIMFRGRNYRQPKNLIPINTLTKRKALFKA---- 264
           K++A+ L   SGGI+V+V  V     I++FRG++Y +P  L P N L+KRKAL ++    
Sbjct: 649 KKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQ 708

Query: 265 ---RFEQALDSQKLNIKKIEQE-LRRKGINPEDPVAM-ASIQRVASTFFNAIDKKEGTPY 324
                   + +    +KK++ E L+ +G+  E  V + A +    S+    ++ ++   Y
Sbjct: 709 RREALSHHIATLNRRVKKLKAELLQMEGVKEEGDVELYAKLDSAYSSDEEDVEDEDDEAY 768

Query: 325 VFYGDKQTATEIERNMEEEESHSDSDQEELD 344
           +   D   A +   N ++  S   SD    D
Sbjct: 769 LRSFDNSVAVQ---NGDDRTSLDGSDANSDD 796

[Close]

BLAST of Carg04465 vs. TrEMBL
Match: tr|A0A0A0KSD9|A0A0A0KSD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G522980 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 1.6e-199
Identity = 449/624 (71.96%), Postives = 476/624 (76.28%), Query Frame = 0


Query: 1   MFSATRRLC-FTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVG 60
           M +ATRR C F+RVS LLLSNRYN+V+   D +SE  S NV  RSI  EYV PS SKVVG
Sbjct: 1   MLAATRRFCSFSRVSNLLLSNRYNSVILSTDCNSEAVSCNVGHRSIHGEYVLPSTSKVVG 60

Query: 61  SFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120
            FNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  PFNGLVRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180
           XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRN+NYVPVGVRGVFGGVV
Sbjct: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVV 180

Query: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQP 240
           QNMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVN+H+VKTIIMFRGRNYRQP
Sbjct: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQP 240

Query: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300
           KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Sbjct: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300

Query: 301 FFNAIDKKEGTPYVFYGDKQTA--TEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDW 360
           FFNAIDKKEGTPYVFY DKQ                        LDRFIAEIEDAADRDW
Sbjct: 301 FFNAIDKKEGTPYVFYSDKQAVXXXXXXXXXXXXXXXXXXXXXXLDRFIAEIEDAADRDW 360

Query: 361 VAEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSE 420
           VAEEAAEKEELSQ+RYRNREEHGGR RKSDMRTNN SDDE++KP VWRQRDSKQRLY+SE
Sbjct: 361 VAEEAAEKEELSQLRYRNREEHGGRFRKSDMRTNNDSDDEMDKPRVWRQRDSKQRLYNSE 420

Query: 421 EEDDEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVEP 480
           EED +H NEE +          XXXXXXXXX                    RSF+RNV+P
Sbjct: 421 EEDGDHENEE-EWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSFERNVDP 480

Query: 481 FVRKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIKK 540
           F R RMD E SEPE MLSDLE+ MWQS           K+    + DY+ N         
Sbjct: 481 FAR-RMDKEASEPENMLSDLENTMWQS---DEEEEDDMKISKNVDQDYKDN-XXXXXXXX 540

Query: 541 DKKNNKLNDYDSSIDESNEAY---EHTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDSD 600
                     DSSIDE +E+Y   +HT                  VSK+TDSGKA+WDSD
Sbjct: 541 XXXXXXXXXXDSSIDEPDESYNKFKHTXXXXXXXXXXXXXXXXXXVSKDTDSGKAMWDSD 600

Query: 601 EEDESGTSRPQRHDYWSGSDEDDS 619
           +EDE GT RPQR+DYWSGSDED S
Sbjct: 601 DEDEKGTLRPQRYDYWSGSDEDGS 618

[Close]

BLAST of Carg04465 vs. TrEMBL
Match: tr|A0A1S3C9B5|A0A1S3C9B5_CUCME (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498113 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 3.3e-197
Identity = 448/607 (73.81%), Postives = 469/607 (77.27%), Query Frame = 0


Query: 1   MFSATRRL-CFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVG 60
           M +ATRRL CF+RVS LLLSNRYNNV+ L D +SE    NVA R I  EYV PS SKVVG
Sbjct: 1   MLAATRRLCCFSRVSNLLLSNRYNNVILLTDLNSETVPCNVAHRIIHGEYVLPSTSKVVG 60

Query: 61  SFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120
            FNGL RCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  PFNGLFRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180
           XXXXXXXLQQLKKYELPELPPPRHDPELLT EQLQAYKKIGFRNKNYVPVGVRGVFGGVV
Sbjct: 121 XXXXXXXLQQLKKYELPELPPPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVV 180

Query: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQP 240
           QNMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIVVNVHNVKTIIMFRGRNYRQP
Sbjct: 181 QNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNVHNVKTIIMFRGRNYRQP 240

Query: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300
           KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST
Sbjct: 241 KNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVAST 300

Query: 301 FFNAIDKKEGTPYVFYGDKQTAT--EIERNMEEEESHSDSDQEELDRFIAEIEDAADRDW 360
           FFNAIDKKEGTPYVFYGDKQ  T                     LDRFIAEIEDAADRDW
Sbjct: 301 FFNAIDKKEGTPYVFYGDKQAVTXXXXXXXXXXXXXXXXXXXXXLDRFIAEIEDAADRDW 360

Query: 361 VAEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSE 420
           VAEEAAEKEELSQIRYRNREEHGGR RKSDMR    SDDE++KP VWRQRDSKQRLY+SE
Sbjct: 361 VAEEAAEKEELSQIRYRNREEHGGRFRKSDMR---YSDDEMDKPRVWRQRDSKQRLYNSE 420

Query: 421 EEDDEHAN-EEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDLAKNRSFKRNVE 480
           EED +H N EEW           XXXXXXXXX                  K  SF+RNV+
Sbjct: 421 EEDGDHENEEEWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTK--SFERNVQ 480

Query: 481 PFVRKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVDLHHIK 540
           PF R RMD E SEPE MLSDLESAMWQS            +    + DY+ NE  LHH+K
Sbjct: 481 PFAR-RMDKEDSEPENMLSDLESAMWQS---DEEEEDDMNISRNVDQDYKHNEDHLHHMK 540

Query: 541 KDKKNNKLNDYDSSIDESNEAYE---HTDTKRKENRMRKSKNSYNFVSKNTDSGKALWDS 600
           KD +NN+ NDYDSS+DE +EAY+   HT                      TDS KA+WDS
Sbjct: 541 KD-RNNRHNDYDSSVDEPDEAYDKFKHTYXXXXXXXXXXXXXXXXXXXXXTDSEKAMWDS 597

[Close]

BLAST of Carg04465 vs. TrEMBL
Match: tr|A0A2P4LLH5|A0A2P4LLH5_QUESU (Putative crm domain-containing protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_45980 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 364/640 (56.88%), Postives = 430/640 (67.19%), Query Frame = 0


Query: 15  TLLLSNRYNNVVSLADFHSEIASSNVALRSIRSE--YVFPSKSKVVGSFNGLSRCMSTSK 74
           +LL SN   N+V L D      SSNV   +I SE   +F S +  +  F G  R MSTSK
Sbjct: 17  SLLQSNPSKNLVFLRDVLPHPISSNVTQPTIPSEDNLLFSSHAS-LDPFKGWFRSMSTSK 76

Query: 75  GRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQLKK 134
           GRSMRSKVE+RM++ESGKTLRE RRAXXXXXXXXXXXXX               LQ+LKK
Sbjct: 77  GRSMRSKVEKRMQRESGKTLREKRRAXXXXXXXXXXXXXLVYNLKRAKKKVALLLQKLKK 136

Query: 135 YELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETV 194
           YELPELPPPRHDPELLTPEQLQA+KKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETV
Sbjct: 137 YELPELPPPRHDPELLTPEQLQAFKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETV 196

Query: 195 QVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLIPINTLTKRK 254
           QVCCDNFPKEKIKEMA M+ARLSGGIVVN+HNVKTIIMFRGRNYRQPK LIPINTLTKRK
Sbjct: 197 QVCCDNFPKEKIKEMATMIARLSGGIVVNIHNVKTIIMFRGRNYRQPKILIPINTLTKRK 256

Query: 255 ALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPY 314
           ALFKARFEQAL+SQKLNIKK+EQ+LRR G+NPEDPVAMASIQRVASTFFNAID++EG+PY
Sbjct: 257 ALFKARFEQALESQKLNIKKLEQQLRRMGVNPEDPVAMASIQRVASTFFNAIDRQEGSPY 316

Query: 315 VFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIR 374
           VF  DK    E  +N EE E   DSDQEELDRFIAEIEDAAD++WVAEE AEKEELS+IR
Sbjct: 317 VFREDKLQVMEPIKNFEESEPPDDSDQEELDRFIAEIEDAADKEWVAEEEAEKEELSKIR 376

Query: 375 YRNREEHGGRLRKSDMRTNNSS---DDEIEKPSVWRQRDSKQRLYDSEEEDDE--HANEE 434
           Y NR +  GR R S+   + +S   DDE+++   WR    KQR  D + ED++    ++E
Sbjct: 377 YWNRADFEGRFRGSETHRDRNSYDDDDEVKQARGWRDARDKQRANDRDGEDNDISGGDDE 436

Query: 435 WDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHD----LAKNRSFKRNVEPFVRKRM 494
           WDS+D + A+DL          H   K++R    + D       N + KRN     RK+ 
Sbjct: 437 WDSNDVRTASDLESDADDSDVVHEKFKSSRANRWKEDKILRAKNNDNSKRNPIANFRKQA 496

Query: 495 DSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSN---EVDLHHIKKDKK 554
             E S+   MLSD E+AMWQS           +    A  +YRS+   E +L+H+  D+K
Sbjct: 497 TEEDSDSVNMLSDTENAMWQSDVEEEPNSEASR---AATYNYRSSSDEEDNLYHVMGDEK 556

Query: 555 NNKLNDYDSSIDESNEAYEHTDTKR----KENRMRKSKNSYNFVSKN----------TDS 614
           N  +N  +S  D+S+E +      R    K NR+ +S N   F +K+           DS
Sbjct: 557 NG-VNQQESDADDSDETHVRFKGSRVAQWKHNRIGRSNNDSYFETKSEAKFSGNMAEEDS 616

Query: 615 G---------KALWDSDEEDESGTSRPQRHDYWSGSDEDD 618
           G          A+W+SD E +S  S   RHDY S  DE+D
Sbjct: 617 GSEEMFSDLENAMWESDAEGDSSASTAGRHDYRSSGDEED 651

[Close]

BLAST of Carg04465 vs. TrEMBL
Match: tr|F6HUU0|F6HUU0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0066g00360 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.6e-149
Identity = 347/642 (54.05%), Postives = 409/642 (63.71%), Query Frame = 0


Query: 24   NVVSLADFHSEIASSNVALRSIRSEYVFPSKSKVVGSFNGLSRCMSTSKGRSMRSKVERR 83
            NVVS      +  SSN    S  SE    S S   G F+G SR MST+ GRSMRSKVERR
Sbjct: 402  NVVSRRYVPLKCLSSNPIQSSAGSEDCSSSISPWNG-FSGWSRAMSTAGGRSMRSKVERR 461

Query: 84   MRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQLKKYELPELPPPRH 143
            MRKESGKTLRE+RRA                            LQ+LKKYELPELP PRH
Sbjct: 462  MRKESGKTLREVRRAQKLRKKLMTDEERLIYNLRRAKKKVALLLQKLKKYELPELPAPRH 521

Query: 144  DPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEK 203
            DPELLT EQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEK
Sbjct: 522  DPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEK 581

Query: 204  IKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYRQPKNLIPINTLTKRK----------A 263
            IKEMA MLARLSGGIV+NVH+VKTIIMFRGRNYRQPKNLIPINTLTKRK          A
Sbjct: 582  IKEMATMLARLSGGIVINVHDVKTIIMFRGRNYRQPKNLIPINTLTKRKATATKKAKEAA 641

Query: 264  LFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKEGTPYV 323
            LFKARFEQALDSQKLNIKKIEQ+LRR G+NPEDPVAMASIQRVASTFFNAIDK+EG+PYV
Sbjct: 642  LFKARFEQALDSQKLNIKKIEQQLRRMGVNPEDPVAMASIQRVASTFFNAIDKQEGSPYV 701

Query: 324  FYGDKQTATEIERNME-EEESHSDSDQEELDRFIAEIEDAADRDWVAEEAAEKEELSQIR 383
            F GDK        +++  EE   DSDQEELD+FIAEIEDAAD++W  EEAAEKEELS++R
Sbjct: 702  FQGDKLFGAAPTEDLKLSEEPPVDSDQEELDQFIAEIEDAADKEWAVEEAAEKEELSKMR 761

Query: 384  YRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSEEE--DDEHANEEWDS 443
            Y NREE  GR R+ D   N   D ++     W     +QR  D+++E  D    +EEWDS
Sbjct: 762  YWNREEFAGRFRRFDNPKNEDFDSDVRGARGWNHTRGRQRTTDTDDEGNDVSEGDEEWDS 821

Query: 444  DDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDL--AKN---RSFKRNVEPFVRKRMDS 503
            +D ++              H      R   G+ D   AKN   + FKRN E F R+++D 
Sbjct: 822  NDVRDLRTPESDGDDSDEVHNEFTAPRMQSGKLDFGRAKNNNSKDFKRNAEEF-RRKVDE 881

Query: 504  EGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRSNEVD---LHHIKKDKKN- 563
            E S  E ML DLE+AMW+S           ++   A++DYRS+  D   LH IK+D KN 
Sbjct: 882  EDSGSEDMLDDLENAMWESDAEEEHDSRTSRM---ASNDYRSSSDDDEHLHRIKRDSKNA 941

Query: 564  -NKLNDYDSSIDES------NEAYEHTDTKRKENRMRKSKNSYNFV-------SKN---- 618
             N +ND+++  D S      +E  E    K+K  ++ +  N   F+       S+N    
Sbjct: 942  RNLVNDHENDADYSESDEGQDEFRESRIAKQKHGQISRVNNDQGFMRNAEANFSRNMIEE 1001

[Close]

BLAST of Carg04465 vs. TrEMBL
Match: tr|A0A2P5AJA3|A0A2P5AJA3_PARAD (RNA-binding, CRM domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_327010 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.4e-147
Identity = 355/650 (54.62%), Postives = 440/650 (67.69%), Query Frame = 0


Query: 1   MFSA--TRRLCFTRVSTLLLSNRYNNVVSLADFHSEIASSNVALRS-IRSEYVFPSKSKV 60
           MF+A    R  +  +S+LL S    +V  L +   +IASSNV   S +R + +  S S +
Sbjct: 1   MFAARNLHRHSWKTLSSLLHSTPSISVWLLRECSPKIASSNVVPPSELREDGLLLSSSTM 60

Query: 61  VGSFNGLSRCMSTSKGRSMRSKVERRMRKESGKTLREIRRAXXXXXXXXXXXXXXXXXXX 120
           +  FN   R MSTSKGRSMRSKVE+RM++ESGKTLRE+RRA XXXXXXXXXXXXXXXXXX
Sbjct: 61  LNPFNAWCRSMSTSKGRSMRSKVEKRMKRESGKTLREVRRAKXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGG 180
           XXXX     LQ+LKKYELPELPPPRHDPELLTPEQLQA+KKIGFRNKNYVPVGVRGVFGG
Sbjct: 121 XXXXKVALLLQKLKKYELPELPPPRHDPELLTPEQLQAFKKIGFRNKNYVPVGVRGVFGG 180

Query: 181 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMAIMLARLSGGIVVNVHNVKTIIMFRGRNYR 240
           VVQNMHLHWKFHETVQVCCDNFPKEKIKEMA MLARLSGGIV+NVHNVKTIIMFRGRNYR
Sbjct: 181 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINVHNVKTIIMFRGRNYR 240

Query: 241 QPKNLIPINTLTKRKALFKARFEQALDSQKLNIKKIEQELRRKGINPEDPVAMASIQRVA 300
           QPKNLIPINTLTKRKALFKARFEQAL+SQKLNIKKIEQ+LRR GINPEDPVA ASIQRVA
Sbjct: 241 QPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRNGINPEDPVATASIQRVA 300

Query: 301 STFFNAIDKKEGTPYVFYGDKQTATEIERNMEEEESHSDSDQEELDRFIAEIEDAADRDW 360
           S+FFNAIDKKEGTPYVF+ +K + T    N E  E   + +QEELD+FIAEIEDAA+R+W
Sbjct: 301 SSFFNAIDKKEGTPYVFHEEKLSGTGPSNNFEPSEPSDEKEQEELDKFIAEIEDAAEREW 360

Query: 361 VAEEAAEKEELSQIRYRNREEHGGRLRKSDMRTNNSSDDEIEKPSVWRQRDSKQRLYDSE 420
            AEEAAEKE+  +IRY NRE+ GGR R+++    +SS DEI+    W+    K R Y+S+
Sbjct: 361 AAEEAAEKEDFGRIRYLNREDFGGRFRRAETFRGDSSYDEIKGARSWKDTRGKPRTYESD 420

Query: 421 EEDDEHANEEWDSDDGQNANDLXXXXXXXXXAHGIVKTTRGAGGRHDL----AKNRSFKR 480
           +ED++  ++EW S + + A+ +         +    +  RG   + +       N   +R
Sbjct: 421 DEDND-GDDEWQSRNARGASPIDSDTDESDGSEENFEANRGDRRKQEKIGRPRNNEVHRR 480

Query: 481 NVEPFVRKRMDSEGSEPETMLSDLESAMWQSXXXXXXXXXXXKVLSCANDDYRS---NEV 540
           N     RK M  E S+ E +LSDLE+AMWQS           +     N +YRS    E 
Sbjct: 481 NAPVNFRKSMPEEDSDEENVLSDLETAMWQSDGDEEHYSNAAR---ATNYNYRSGSDEEE 540

Query: 541 DLHHIKKDKKNNKLNDYDSSIDESNEAYEHTDTKR----KENRMRKSKNSYNFVSKNTDS 600
           D +++K++K       Y+SS D+S+E+       R    ++NR   +  + + +     +
Sbjct: 541 DSYNLKEEKGGRM--TYESSADDSDESQHRLRAPRVVKGRQNRAGSTDKNEDPLRSTGAN 600

Query: 601 GKALWD---------------SDEEDESGTSRPQRHDYWSGSDEDDSRRK 622
            +  WD               S+ E++S  S   + +Y S  DE++ + K
Sbjct: 601 LRRKWDEDLNSGHSANAWPVESEAEEDSQASGAGKLNYLSSDDEEEYQVK 644

The following BLAST results are available for this feature:

BLAST of Carg04465 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963886.1	2.1e-296	96.78	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_023550703.1	8.9e-295	96.30	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_022990655.1	2.7e-259	88.00	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_022134259.1	1.7e-213	75.52	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Momordic...	[more]
XP_004142845.1	2.4e-199	71.96	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]

BLAST of Carg04465 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27550.1	7.6e-131	73.19	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	8.7e-34	48.68	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	3.3e-33	36.01	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G28480.1	5.6e-33	45.70	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G18390.1	1.2e-22	36.36	CRS1 / YhbY (CRM) domain-containing protein	[more]

BLAST of Carg04465 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67XL4\|Y3544_ARATH	6.0e-32	36.01	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
sp\|A7XN92\|CFM3_MAIZE	1.4e-20	37.84	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=45...	[more]
sp\|F4J2U9\|CFM3A_ARATH	5.2e-20	42.02	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
sp\|Q8L7C2\|CFM2_ARATH	3.4e-19	37.50	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q2R1U8\|CFM3_ORYSJ	2.2e-18	30.81	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]

BLAST of Carg04465 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSD9\|A0A0A0KSD9_CUCSA	1.6e-199	71.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G522980 PE=4 SV=1	[more]
tr\|A0A1S3C9B5\|A0A1S3C9B5_CUCME	3.3e-197	73.81	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumi...	[more]
tr\|A0A2P4LLH5\|A0A2P4LLH5_QUESU	1.6e-154	56.88	Putative crm domain-containing protein, chloroplastic OS=Quercus suber OX=58331 ...	[more]
tr\|F6HUU0\|F6HUU0_VITVI	2.6e-149	54.05	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0066g00360 PE=4 SV=...	[more]
tr\|A0A2P5AJA3\|A0A2P5AJA3_PARAD	5.4e-147	54.62	RNA-binding, CRM domain containing protein OS=Parasponia andersonii OX=3476 GN=P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035920	YhbY_like_sf
IPR001890	RNA-binding_CRM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04465-RA	Carg04465-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 494..514
None	No IPR available	COILS	Coil	Coil	coord: 256..276
None	No IPR available	COILS	Coil	Coil	coord: 321..341
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 537..573
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 588..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 537..621
None	No IPR available	PANTHER	PTHR31426	FAMILY NOT NAMED	coord: 20..594
None	No IPR available	PANTHER	PTHR31426:SF4	RNA-BINDING CRS1 / YHBY CRM DOMAIN PROTEIN	coord: 20..594
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 148..232 e-value: 2.7E-17 score: 73.5
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 148..232 e-value: 7.1E-17 score: 61.3
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 146..243 score: 18.141
IPR035920	YhbY-like superfamily	SUPERFAMILY	SSF75471	YhbY-like	coord: 147..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04465	Cla004627	Watermelon (97103) v1	carwmB0679
Carg04465	Csa5G522980	Cucumber (Chinese Long) v2	carcuB0707
Carg04465	MELO3C021588	Melon (DHL92) v3.5.1	carmeB0682
Carg04465	ClCG09G019350	Watermelon (Charleston Gray)	carwcgB0657
Carg04465	CSPI05G18130	Wild cucumber (PI 183967)	carcpiB0721
Carg04465	Cucsa.011200	Cucumber (Gy14) v1	carcgyB0766
Carg04465	Lsi02G016000	Bottle gourd (USVL1VR-Ls)	carlsiB623
Carg04465	Cp4.1LG01g23520	Cucurbita pepo (Zucchini)	carcpeB0965
Carg04465	CsGy5G017800	Cucumber (Gy14) v2	carcgybB0685
Carg04465	MELO3C021588.2	Melon (DHL92) v3.6.1	carmedB0694
Carg04465	CsaV3_5G027060	Cucumber (Chinese Long) v3	carcucB0724
Carg04465	Cla97C09G180800	Watermelon (97103) v2	carwmbB0714
Carg04465	Bhi06G000482	Wax gourd	carwgoB0801

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04465	Wax gourd	carwgoB0800
Carg04465	Silver-seed gourd	carcarB306
Carg04465	Silver-seed gourd	carcarB393
Carg04465	Silver-seed gourd	carcarB398
Carg04465	Silver-seed gourd	carcarB444
Carg04465	Cucumber (Gy14) v2	carcgybB0683
Carg04465	Cucumber (Gy14) v1	carcgyB0770
Carg04465	Cucurbita maxima (Rimu)	carcmaB0958
Carg04465	Cucurbita maxima (Rimu)	carcmaB0960
Carg04465	Cucurbita maxima (Rimu)	carcmaB0961
Carg04465	Cucurbita maxima (Rimu)	carcmaB0967
Carg04465	Cucurbita moschata (Rifu)	carcmoB0934
Carg04465	Cucurbita moschata (Rifu)	carcmoB0935
Carg04465	Cucurbita moschata (Rifu)	carcmoB0936
Carg04465	Cucurbita moschata (Rifu)	carcmoB0940
Carg04465	Cucurbita pepo (Zucchini)	carcpeB0962
Carg04465	Cucurbita pepo (Zucchini)	carcpeB0967
Carg04465	Cucurbita pepo (Zucchini)	carcpeB0969
Carg04465	Wild cucumber (PI 183967)	carcpiB0719
Carg04465	Cucumber (Chinese Long) v2	carcuB0705
Carg04465	Cucumber (Chinese Long) v3	carcucB0722
Carg04465	Bottle gourd (USVL1VR-Ls)	carlsiB626
Carg04465	Melon (DHL92) v3.5.1	carmeB0687
Carg04465	Melon (DHL92) v3.6.1	carmedB0700
Carg04465	Watermelon (Charleston Gray)	carwcgB0659
Carg04465	Watermelon (97103) v1	carwmB0681
Carg04465	Watermelon (97103) v2	carwmbB0708