Carg04376 (gene) Silver-seed gourd

NameCarg04376
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_032 : 82849 .. 83436 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCTCTGTTCCTCAGGATGTGGAATATAGAAAAAGGCAAAGAAAGAACCAAGTAGCCACTTACAATGGCGTTGGCTACAACAAAGAAGCTGCTCAAACACCCAAAAGAGGTTAGTAAATCATTGAGTCAGTCTTTGAAATATAAAGTAGTTATTTATGACATACGTAAACATAGGGATATCATTATACTCAGCTCTGAACTGAATAAACTGTGTGACAAATGGAAGAGTCTGGTTGGTGGTTCCCATAGCTATTGCACTTCCTAATGTTCCAACAATGGCAGCCAACCTTAGGATGAAGTCGAGTATCGACAAACCTCGGTTCACCCCTGGTTTGGTTTTGGAGCTCTTTAGCTCACTTGACTCGCTCATAGTTGCCTTCATCTTTCTTTGGAAGCTTTGAGAGGGGGTTTGTTTAGGACGCTCAATGTGCATGGCTGAGTAGTGTGCGCCAAGGAGCTATTAATATGCAATACAAAGGCTATGCAATGTTGTTTTGGTGAAGTTTAGTGGCGAAAGAGCCCACAGGAGAGCATAACAACTCCACTCCACAAAGAGGGGGAACACTTAGGGATAATCTACTTTAA

mRNA sequence

ATGCGCTCTGTTCCTCAGGATGTGGAATATAGAAAAAGGCAAAGAAAGAACCAAGTAGCCACTTACAATGGCGTTGGCTACAACAAAGAAGCTGCTCAAACACCCAAAAGAGTGGCGAAAGAGCCCACAGGAGAGCATAACAACTCCACTCCACAAAGAGGGGGAACACTTAGGGATAATCTACTTTAA

Coding sequence (CDS)

ATGCGCTCTGTTCCTCAGGATGTGGAATATAGAAAAAGGCAAAGAAAGAACCAAGTAGCCACTTACAATGGCGTTGGCTACAACAAAGAAGCTGCTCAAACACCCAAAAGAGTGGCGAAAGAGCCCACAGGAGAGCATAACAACTCCACTCCACAAAGAGGGGGAACACTTAGGGATAATCTACTTTAA

Protein sequence

MRSVPQDVEYRKRQRKNQVATYNGVGYNKEAAQTPKRVAKEPTGEHNNSTPQRGGTLRDNLL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04376-RACarg04376-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..62

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04376Wax gourdcarwgoB0801
Carg04376Wax gourdcarwgoB0808
Carg04376Cucumber (Gy14) v2carcgybB0679
Carg04376Silver-seed gourdcarcarB062
Carg04376Silver-seed gourdcarcarB115
Carg04376Silver-seed gourdcarcarB251
Carg04376Silver-seed gourdcarcarB306
Carg04376Silver-seed gourdcarcarB445
Carg04376Cucumber (Gy14) v2carcgybB0680
Carg04376Cucumber (Gy14) v2carcgybB0686
Carg04376Cucumber (Gy14) v1carcgyB0761
Carg04376Cucumber (Gy14) v1carcgyB0763
Carg04376Cucumber (Gy14) v1carcgyB0767
Carg04376Cucurbita maxima (Rimu)carcmaB0959
Carg04376Cucurbita maxima (Rimu)carcmaB0961
Carg04376Cucurbita maxima (Rimu)carcmaB0967
Carg04376Cucurbita moschata (Rifu)carcmoB0936
Carg04376Cucurbita moschata (Rifu)carcmoB0940
Carg04376Cucurbita pepo (Zucchini)carcpeB0962
Carg04376Cucurbita pepo (Zucchini)carcpeB0965
Carg04376Cucurbita pepo (Zucchini)carcpeB0968
Carg04376Wild cucumber (PI 183967)carcpiB0715
Carg04376Wild cucumber (PI 183967)carcpiB0716
Carg04376Wild cucumber (PI 183967)carcpiB0722
Carg04376Cucumber (Chinese Long) v2carcuB0708
Carg04376Cucumber (Chinese Long) v3carcucB0718
Carg04376Cucumber (Chinese Long) v3carcucB0719
Carg04376Cucumber (Chinese Long) v3carcucB0725
Carg04376Melon (DHL92) v3.6.1carmedB0701
Carg04376Bottle gourd (USVL1VR-Ls)carlsiB623
Carg04376Bottle gourd (USVL1VR-Ls)carlsiB625
Carg04376Melon (DHL92) v3.5.1carmeB0682
Carg04376Melon (DHL92) v3.5.1carmeB0685
Carg04376Melon (DHL92) v3.5.1carmeB0688
Carg04376Melon (DHL92) v3.6.1carmedB0694
Carg04376Melon (DHL92) v3.6.1carmedB0697
Carg04376Watermelon (Charleston Gray)carwcgB0657
Carg04376Watermelon (Charleston Gray)carwcgB0662
Carg04376Watermelon (97103) v1carwmB0679
Carg04376Watermelon (97103) v1carwmB0684
Carg04376Watermelon (97103) v2carwmbB0709
Carg04376Watermelon (97103) v2carwmbB0712
Carg04376Watermelon (97103) v2carwmbB0714