Carg04371 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04371
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb transcription factor mixta-like protein
Location	Cucurbita_argyrosperma_scaffold_032 : 64746 .. 66354 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTCGCTCCTTCAATTTTCTCGTGTTCTGGGCTACTGTCTTGTCTTGTTCTTGTCTCTTTTTTTGAAGAAAAATGACATAAAACATTCAATATTGAACCAAAAAGCTTGAATCTTTTGGGATGAGGTGCACTGATATTGATGCCAACTTTGGCTTCATCGTTAATAATATTACCACTCTTCTGACAACCTGAAATTTTGCAAACACAACACACACACCTACTAAATTTCTTCACAAACACGAAATGGTGTCTGAAATTGTGATGTCTCAAGTTGATTGGGAGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTCCCCTACCAAACGTATTTTAAGGTAAGCCCGGAAGGGAAAGTCTAAAGAGGACAATATGTGCTAACAGTAGAGGAGAACAAACCACAATTTATAAGGGTGTGTAAACCTCCCCTAGCATACGTGTTTTAGGGAAAGCCCGAAGGGGAAAGCTTAAAGAGGACAATATCGACTAGCGGTGGATCTAAGCGGTTACAGAAATTTTGTCATCAAAACTCTCGTTTTTGAAACCCTCTTGTTTGTGTGGATGTTTAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACGGATAATGAGATTAAAAATTATTGGAACACACATCTTAAGAAAAGATTGGCTAAAATGGGGATTGACCCAGTTACCCACAAGCCTAAAAATGACGCTTTGCTCACCGGTGATGGCCAGCCAAAATGTGCGGCTAATTTAAGCCACATAGCACAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTTGTTAGAGAATCAAGGCTACGTAATAATAACTCACATTCTTCTCTCCAACAACTTCCAAACCCTCCTTGTTTTCCACCTTCTTCCTCTTCAACTTCCACTTCAGCTCAGCTTTTGCCCAATTCCGACTCGCCCGCTGCCATGGCTTCCCGTTCGCTCGAGGCATTGAAAGCTTGGAACAACGGTGTGTACTAAAGTTCACTATTTTAAATCCGAACATTTAAGTTGATAGGTTACGGTAAATTTAGCTTTTTTTTTAATGTCATTGGTAGGGTGGTCCAAATCGGCCGAAGGAGCCAGTGGCATTCTGACCCGTGGTATTGGGGGTGACCTCGAGTCGCCTACCTCGACATTGACTTTCTCAGAGAACGTACTGCCGGTTATGGCCACCGGGTGCGGGGAGGGCGAGAATTCAGCGGCTATGATCGAGTTTGTGGGGAGTTCAAGCTCTTGTGAGAGAGAGTGGAAGGAAGAGGGATTTGGAAACTCAAGCCAATTACCAGAATACAAGGAGGGTTTTGAGAATTCAATGTCGTTTACATCTCATGATATGACATTATCCATTGAAGCAACATGGACAGCTGAATCCTTAAGAACAAAAGAAGCCATTGCTGAAGAAGGCTTCACTAATCTTCTTCTAAACAACAAAGTTGAAAGAAGCCAATCTGAAGGAGGTGGTGGTGGTGGTGGTGGTGAGGACTCTGAAAATGGAAGTGGGAGTGCAGCAAGTGATTACTATGAAGATAACAAGAATTACTGGAATAGCATTCTTAATTTGGTAAATTCTTCTCCCTCTAATTCTTCCATTTTCTAA

mRNA sequence

GCCTCGCTCCTTCAATTTTCTCGTGTTCTGGGCTACTGTCTTGTCTTGTTCTTGTCTCTTTTTTTGAAGAAAAATGACATAAAACATTCAATATTGAACCAAAAAGCTTGAATCTTTTGGGATGAGGTGCACTGATATTGATGCCAACTTTGGCTTCATCGTTAATAATATTACCACTCTTCTGACAACCTGAAATTTTGCAAACACAACACACACACCTACTAAATTTCTTCACAAACACGAAATGGTGTCTGAAATTGTGATGTCTCAAGTTGATTGGGAGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTCCCCTACCAAACGTATTTTAAGGTAAGCCCGGAAGGGAAAGTCTAAAGAGGACAATATGTGCTAACAGTAGAGGAGAACAAACCACAATTTATAAGGGTGTGTAAACCTCCCCTAGCATACGTGTTTTAGGGAAAGCCCGAAGGGGAAAGCTTAAAGAGGACAATATCGACTAGCGGTGGATCTAAGCGGTTACAGAAATTTTGTCATCAAAACTCTCGTTTTTGAAACCCTCTTGTTTGTGTGGATGTTTAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACGGATAATGAGATTAAAAATTATTGGAACACACATCTTAAGAAAAGATTGGCTAAAATGGGGATTGACCCAGTTACCCACAAGCCTAAAAATGACGCTTTGCTCACCGGTGATGGCCAGCCAAAATGTGCGGCTAATTTAAGCCACATAGCACAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTTGTTAGAGAATCAAGGCTACGTAATAATAACTCACATTCTTCTCTCCAACAACTTCCAAACCCTCCTTGTTTTCCACCTTCTTCCTCTTCAACTTCCACTTCAGCTCAGCTTTTGCCCAATTCCGACTCGCCCGCTGCCATGGCTTCCCGTTCGCTCGAGGCATTGAAAGCTTGGAACAACGGGTGGTCCAAATCGGCCGAAGGAGCCAGTGGCATTCTGACCCGTGGTATTGGGGGTGACCTCGAGTCGCCTACCTCGACATTGACTTTCTCAGAGAACGTACTGCCGGTTATGGCCACCGGGTGCGGGGAGGGCGAGAATTCAGCGGCTATGATCGAGTTTGTGGGGAGTTCAAGCTCTTGTGAGAGAGAGTGGAAGGAAGAGGGATTTGGAAACTCAAGCCAATTACCAGAATACAAGGAGGGTTTTGAGAATTCAATGTCGTTTACATCTCATGATATGACATTATCCATTGAAGCAACATGGACAGCTGAATCCTTAAGAACAAAAGAAGCCATTGCTGAAGAAGGCTTCACTAATCTTCTTCTAAACAACAAAGTTGAAAGAAGCCAATCTGAAGGAGGTGGTGGTGGTGGTGGTGGTGAGGACTCTGAAAATGGAAGTGGGAGTGCAGCAAGTGATTACTATGAAGATAACAAGAATTACTGGAATAGCATTCTTAATTTGGTAAATTCTTCTCCCTCTAATTCTTCCATTTTCTAA

Coding sequence (CDS)

ATGTTTAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACGGATAATGAGATTAAAAATTATTGGAACACACATCTTAAGAAAAGATTGGCTAAAATGGGGATTGACCCAGTTACCCACAAGCCTAAAAATGACGCTTTGCTCACCGGTGATGGCCAGCCAAAATGTGCGGCTAATTTAAGCCACATAGCACAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTTGTTAGAGAATCAAGGCTACGTAATAATAACTCACATTCTTCTCTCCAACAACTTCCAAACCCTCCTTGTTTTCCACCTTCTTCCTCTTCAACTTCCACTTCAGCTCAGCTTTTGCCCAATTCCGACTCGCCCGCTGCCATGGCTTCCCGTTCGCTCGAGGCATTGAAAGCTTGGAACAACGGGTGGTCCAAATCGGCCGAAGGAGCCAGTGGCATTCTGACCCGTGGTATTGGGGGTGACCTCGAGTCGCCTACCTCGACATTGACTTTCTCAGAGAACGTACTGCCGGTTATGGCCACCGGGTGCGGGGAGGGCGAGAATTCAGCGGCTATGATCGAGTTTGTGGGGAGTTCAAGCTCTTGTGAGAGAGAGTGGAAGGAAGAGGGATTTGGAAACTCAAGCCAATTACCAGAATACAAGGAGGGTTTTGAGAATTCAATGTCGTTTACATCTCATGATATGACATTATCCATTGAAGCAACATGGACAGCTGAATCCTTAAGAACAAAAGAAGCCATTGCTGAAGAAGGCTTCACTAATCTTCTTCTAAACAACAAAGTTGAAAGAAGCCAATCTGAAGGAGGTGGTGGTGGTGGTGGTGGTGAGGACTCTGAAAATGGAAGTGGGAGTGCAGCAAGTGATTACTATGAAGATAACAAGAATTACTGGAATAGCATTCTTAATTTGGTAAATTCTTCTCCCTCTAATTCTTCCATTTTCTAA

Protein sequence

MFRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLSHIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSPAAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGEGENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTAESLRTKEAIAEEGFTNLLLNNKVERSQSEGGGGGGGGEDSENGSGSAASDYYEDNKNYWNSILNLVNSSPSNSSIF

Homology

[Close]

BLAST of Carg04371 vs. NCBI nr
Match: XP_022921395.1 (transcription factor MYB106-like [Cucurbita moschata])

HSP 1 Score: 535.4 bits (1378), Expect = 1.3e-148
Identity = 302/316 (95.57%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP
Sbjct: 148 HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
           AAMASRSLEALKAWNNGWSKSAEG  GILTRGIGGDLESPTSTLTFSENVLPVMATGCGE
Sbjct: 208 AAMASRSLEALKAWNNGWSKSAEGTGGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 267

Query: 183 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 242
           GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA
Sbjct: 268 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 327

Query: 243 ESLRTKEAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYWN 302
           ESLRTKEAIAEEGFTNLLLNN         XXXXXXXXXXXXXXXXXXXXXX   KNYWN
Sbjct: 328 ESLRTKEAIAEEGFTNLLLNN----KVERSXXXXXXXXXXXXXXXXXXXXXXEDNKNYWN 387

Query: 303 SILNLVNSSPSNSSIF 319
           SILNLVNSSPSNSSIF
Sbjct: 388 SILNLVNSSPSNSSIF 399

[Close]

BLAST of Carg04371 vs. NCBI nr
Match: XP_023544429.1 (transcription factor MYB106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 6.5e-148
Identity = 312/316 (98.73%), Postives = 312/316 (98.73%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPK  ANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKSVANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP
Sbjct: 148 HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
           AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE
Sbjct: 208 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 267

Query: 183 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 242
           GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA
Sbjct: 268 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 327

Query: 243 ESLRTKEAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYWN 302
           ESLRTKEAIAEEGFTNLLLNN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYWN
Sbjct: 328 ESLRTKEAIAEEGFTNLLLNN-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYWN 387

Query: 303 SILNLVNSSPSNSSIF 319
           SILNLVNSSPSNSSIF
Sbjct: 388 SILNLVNSSPSNSSIF 402

[Close]

BLAST of Carg04371 vs. NCBI nr
Match: XP_022989899.1 (transcription factor MYB106-like [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 306/316 (96.84%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPK AANLS
Sbjct: 124 RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKSAANLS 183

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP
Sbjct: 184 HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 243

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
           AAMASRSLEALKAWNNGWSKSAEG  GILTR IGGDLESPTSTLTFSENVLPVMATGCGE
Sbjct: 244 AAMASRSLEALKAWNNGWSKSAEGTGGILTRVIGGDLESPTSTLTFSENVLPVMATGCGE 303

Query: 183 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 242
           GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA
Sbjct: 304 GENSAAMIEFVGSSSSCEREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLSIEATWTA 363

Query: 243 ESLRTKEAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYWN 302
           ESLRTKEAIAEEGFTNLLLNN     XXXXXXXXXXXXXXXXXXXXXXXXXXXX KNYWN
Sbjct: 364 ESLRTKEAIAEEGFTNLLLNN---KVXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKNYWN 423

Query: 303 SILNLVNSSPSNSSIF 319
           SILNLVNSSPSNSSIF
Sbjct: 424 SILNLVNSSPSNSSIF 436

[Close]

BLAST of Carg04371 vs. NCBI nr
Match: XP_022939189.1 (transcription factor MYB106-like [Cucurbita moschata] >XP_022939190.1 transcription factor MYB106-like [Cucurbita moschata] >XP_022939191.1 transcription factor MYB106-like [Cucurbita moschata] >XP_022939192.1 transcription factor MYB106-like [Cucurbita moschata] >XP_022939193.1 transcription factor MYB106-like [Cucurbita moschata] >XP_022939194.1 transcription factor MYB106-like [Cucurbita moschata])

HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119
Identity = 248/324 (76.54%), Postives = 258/324 (79.63%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQ K  ANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQSKSVANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLR +N+HSSLQQL NPPCF  SSSSTSTSA LL  S+ P
Sbjct: 148 HIAQWESARLEAEARLVRESRLR-SNAHSSLQQLANPPCFAASSSSTSTSAPLLSKSE-P 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
            AMASRSL+ALKAWNNGWS+S EG  GIL RG GGDLESPTSTLTFSENV P+MA G G 
Sbjct: 208 PAMASRSLDALKAWNNGWSRSTEGNGGILGRGTGGDLESPTSTLTFSENVPPIMARG-GG 267

Query: 183 GENSAAMIEFVGSSSSC-------EREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLS 242
           GENS AMIEFVGSSSSC       EREWKEEG GN SQLPEYKEGFENSMSFTSH+MTLS
Sbjct: 268 GENSVAMIEFVGSSSSCDQGGIMREREWKEEGIGNPSQLPEYKEGFENSMSFTSHEMTLS 327

Query: 243 IEATWTAESLRTKE-AIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           IEATWTAESLRT +  IAEEGFTNLLLNN                   XX          
Sbjct: 328 IEATWTAESLRTSDNGIAEEGFTNLLLNN------TDERSQSDGGGDEXXNGSGSGTDYY 387

Query: 303 XXXKNYWNSILNLVNSSPSNSSIF 319
              KNYWNSILNLVNSSPS+SS+F
Sbjct: 388 EDNKNYWNSILNLVNSSPSDSSMF 402

[Close]

BLAST of Carg04371 vs. NCBI nr
Match: XP_023550452.1 (transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550453.1 transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550454.1 transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550455.1 transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550456.1 transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550457.1 transcription factor MYB16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 245/324 (75.62%), Postives = 256/324 (79.01%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQ K  ANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQSKSVANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLR +N+HSSLQQL NPPCF  SSSSTSTSA LL  S+ P
Sbjct: 148 HIAQWESARLEAEARLVRESRLR-SNAHSSLQQLANPPCFAASSSSTSTSAPLLSKSELP 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
            A+ASRSL+ALKAWNNGWS+S EG SGIL RG GGDLESPTSTLTF ENV P+MA G G 
Sbjct: 208 -ALASRSLDALKAWNNGWSRSTEGNSGILGRGTGGDLESPTSTLTFLENVPPIMARG-GV 267

Query: 183 GENSAAMIEFVGSSSSC-------EREWKEEGFGNSSQLPEYKEGFENSMSFTSHDMTLS 242
           GENS A IEFVGSSSSC       EREWKEEG GN  QLPEYKEGFENSMSFTSH+MTLS
Sbjct: 268 GENSVATIEFVGSSSSCDQGGIMREREWKEEGIGNPGQLPEYKEGFENSMSFTSHEMTLS 327

Query: 243 IEATWTAESLRTKE-AIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           IEATWTAESLRT +  IAEEGFTNLLLNN                   XX          
Sbjct: 328 IEATWTAESLRTSDNGIAEEGFTNLLLNN------TDERSQSDGGGDEXXNGSGSGTDYY 387

Query: 303 XXXKNYWNSILNLVNSSPSNSSIF 319
              KNYWNSILNLVNSSPS+SS+F
Sbjct: 388 EDNKNYWNSILNLVNSSPSDSSMF 402

[Close]

BLAST of Carg04371 vs. TAIR10
Match: AT3G01140.1 (myb domain protein 106)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-37
Identity = 94/178 (52.81%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRL KMGIDPVTHK KN+ L +  GQ K AA LS
Sbjct: 131 RWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSSTGQSKNAATLS 190

Query: 63  HIAQWESARLEAEARLVRESRLRN-----NNSHSSLQQLPNPPCFPPSSSSTSTSAQLLP 122
           H+AQWESARLEAEARL RES+L +     NN++ +    P   CF   +  TST+     
Sbjct: 191 HMAQWESARLEAEARLARESKLLHLQHYQNNNNLNKSAAPQQHCF---TQKTSTN----- 250

Query: 123 NSDSPAAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGD--LESPTSTLTFSENVL 174
                                 W+K  +G          GD  LESPTST+TFSEN+L
Sbjct: 251 ----------------------WTKPNQG---------NGDQQLESPTSTVTFSENLL 269

[Close]

BLAST of Carg04371 vs. TAIR10
Match: AT5G15310.1 (myb domain protein 16)

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 98/195 (50.26%), Postives = 107/195 (54.87%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRL KMGIDPVTHKPKN+  L+  G  K AA LS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDPVTHKPKNETPLSSLGLSKNAAILS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H AQWESARLEAEARL RES+L +      LQ         P      T   LLPN    
Sbjct: 148 HTAQWESARLEAEARLARESKLLH------LQHYQTKTSSQPHHHHGFTHKSLLPN---- 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
                        W    +K  E             LESPTST++FSE            
Sbjct: 208 -------------WT---TKPHEDQQ---------QLESPTSTVSFSE-----------M 236

Query: 183 GENSAAMIEFVGSSS 198
            E+  A IEFVGSS+
Sbjct: 268 KESIPAKIEFVGSST 236

[Close]

BLAST of Carg04371 vs. TAIR10
Match: AT3G61250.1 (myb domain protein 17)

HSP 1 Score: 98.6 bits (244), Expect = 7.4e-21
Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RW+AIA  LP RTDNEIKN WNTHLKKRL  MG+DP TH+P     L    Q   +    
Sbjct: 88  RWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRTHEPLPSYGLA--KQAPSSPTTR 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSL 94
           H+AQWESAR+EAEARL RES L + + +S +
Sbjct: 148 HMAQWESARVEAEARLSRESMLFSPSFYSGV 176

[Close]

BLAST of Carg04371 vs. TAIR10
Match: AT5G61420.2 (myb domain protein 28)

HSP 1 Score: 82.4 bits (202), Expect = 5.5e-16
Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           +WS IA HLP+RTDNEIKNYWNTHLKKRL + GIDPVTHKP     L     P    NL+
Sbjct: 88  KWSVIARHLPRRTDNEIKNYWNTHLKKRLMEQGIDPVTHKP-----LASSSNPTVDENLN 142

[Close]

BLAST of Carg04371 vs. TAIR10
Match: AT5G16600.1 (myb domain protein 43)

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-16
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWS IA+HLP RTDNEIKN+WNTH+KK+L KMGIDP+THKP ++   +   Q +  + + 
Sbjct: 88  RWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPLTHKPLSEQEASQQAQGRKKSLVP 147

Query: 63  H----IAQWESARLEAEARLVRESRLRNNNSHS 92
           H      Q +  + E E   + ++  +NN S S
Sbjct: 148 HDDKNPKQDQQTKDEQEQHQLEQALEKNNTSVS 180

[Close]

BLAST of Carg04371 vs. Swiss-Prot
Match: sp|Q9LE63|MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.9e-36
Identity = 94/178 (52.81%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRL KMGIDPVTHK KN+ L +  GQ K AA LS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSSTGQSKNAATLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRN-----NNSHSSLQQLPNPPCFPPSSSSTSTSAQLLP 122
           H+AQWESARLEAEARL RES+L +     NN++ +    P   CF   +  TST+     
Sbjct: 148 HMAQWESARLEAEARLARESKLLHLQHYQNNNNLNKSAAPQQHCF---TQKTSTN----- 207

Query: 123 NSDSPAAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGD--LESPTSTLTFSENVL 174
                                 W+K  +G          GD  LESPTST+TFSEN+L
Sbjct: 208 ----------------------WTKPNQG---------NGDQQLESPTSTVTFSENLL 226

[Close]

BLAST of Carg04371 vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.7e-33
Identity = 98/195 (50.26%), Postives = 107/195 (54.87%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRL KMGIDPVTHKPKN+  L+  G  K AA LS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDPVTHKPKNETPLSSLGLSKNAAILS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H AQWESARLEAEARL RES+L +      LQ         P      T   LLPN    
Sbjct: 148 HTAQWESARLEAEARLARESKLLH------LQHYQTKTSSQPHHHHGFTHKSLLPN---- 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
                        W    +K  E             LESPTST++FSE            
Sbjct: 208 -------------WT---TKPHEDQQ---------QLESPTSTVSFSE-----------M 236

Query: 183 GENSAAMIEFVGSSS 198
            E+  A IEFVGSS+
Sbjct: 268 KESIPAKIEFVGSST 236

[Close]

BLAST of Carg04371 vs. Swiss-Prot
Match: sp|P80074|MYB1_PHYPA (Myb-related protein Pp1 (Fragment) OS=Physcomitrella patens subsp. patens OX=3218 GN=PP1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 3  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPK------NDALLTGDGQPK 62
          RWSAIA  +P+RTDNEIKNYWNTHLKKRL +MGIDPVTHK        + +++ G  +P 
Sbjct: 4  RWSAIA--IPRRTDNEIKNYWNTHLKKRLMQMGIDPVTHKSTAAEELVHYSIIPG-LRPV 63

Query: 63 CAANLSHIAQWESARLEAEARLVRESRL 85
           + NL+H++QW+SAR EAEARL R+S L
Sbjct: 64 VSTNLTHMSQWDSARAEAEARLSRQSSL 88

[Close]

BLAST of Carg04371 vs. Swiss-Prot
Match: sp|Q9M2D9|MYB17_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19
Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RW+AIA  LP RTDNEIKN WNTHLKKRL  MG+DP TH+P     L    Q   +    
Sbjct: 88  RWAAIAAQLPGRTDNEIKNLWNTHLKKRLLSMGLDPRTHEPLPSYGLA--KQAPSSPTTR 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSL 94
           H+AQWESAR+EAEARL RES L + + +S +
Sbjct: 148 HMAQWESARVEAEARLSRESMLFSPSFYSGV 176

[Close]

BLAST of Carg04371 vs. Swiss-Prot
Match: sp|Q9SPG2|MYB28_ARATH (Transcription factor MYB28 OS=Arabidopsis thaliana OX=3702 GN=MYB28 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.9e-15
Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           +WS IA HLP+RTDNEIKNYWNTHLKKRL + GIDPVTHKP     L     P    NL+
Sbjct: 88  KWSVIARHLPRRTDNEIKNYWNTHLKKRLMEQGIDPVTHKP-----LASSSNPTVDENLN 142

[Close]

BLAST of Carg04371 vs. TrEMBL
Match: tr|A0A061EF18|A0A061EF18_THECC (Myb domain protein 106 OS=Theobroma cacao OX=3641 GN=TCM_018639 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 187/337 (55.49%), Postives = 214/337 (63.50%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPK+DALL+ DGQ K AANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKSDALLSTDGQSKNAANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H+AQWESARLEAEARLVRES+LR+N    SLQ   NPP + PS                 
Sbjct: 148 HMAQWESARLEAEARLVRESKLRSN----SLQHQLNPPGYAPS-----------XXXXXX 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTR---GIGGDLESPTSTLTFSENVLPVMATG 182
                  L    AWN+GWSKS+EG +G+L     G+ GDLESPTSTLTFSEN  P+M+TG
Sbjct: 208 XXXXXXXLVNKTAWNSGWSKSSEGNTGVLNSTGLGVAGDLESPTSTLTFSENAPPIMSTG 267

Query: 183 CGEGENSAAMIEFVGSSSSC----------EREWKEEGFGNSSQLPEYKEGFENSMSFTS 242
              G +S  MIEFVG++S            E++WK  G G+SS LPEYKEG ENS+SFTS
Sbjct: 268 L--GVSSMPMIEFVGTTSGSSDTGIIKEEGEQDWK--GLGSSSNLPEYKEGMENSLSFTS 327

Query: 243 --HDMTLSIEATWTAESLRTKEA------IAEEGFTNLLLNNXXXXXXXXXXXXXXXXXX 302
             HDMT+S+E  WT ESLR          + +EGFTNLLLN+                  
Sbjct: 328 SLHDMTISMEEGWTPESLRPNNGHVNVGNVMDEGFTNLLLND----SMDRSLSDSGKESD 387

Query: 303 XXXXXXXXXXXXXXXXKNYWNSILNLVNSSPSNSSIF 319
                           KNYWNSILNLVNSSPS+S +F
Sbjct: 388 ENSGGSGDGSDYYEDNKNYWNSILNLVNSSPSDSPMF 401

[Close]

BLAST of Carg04371 vs. TrEMBL
Match: tr|A0A0A0KXE9|A0A0A0KXE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G637660 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.8e-77
Identity = 228/338 (67.46%), Postives = 237/338 (70.12%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRL KMGIDPVTHKPKNDALLT DG  K AANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLTADGHSKSAANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           HIAQWESARLEAEARLVRESRLR + + +S     NPP           S  LL   + P
Sbjct: 148 HIAQWESARLEAEARLVRESRLRTSTTTAS---TTNPP-----------SPHLLTKPEPP 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGI-GGD--LESPTSTLTFSENVLPVMATG 182
            A+ SRSL+ALK WN+G           L RGI GGD  LESPTSTLTFSENV  VM TG
Sbjct: 208 PAIPSRSLDALKPWNHG-----------LGRGITGGDHHLESPTSTLTFSENVRTVMGTG 267

Query: 183 CGEGENSAAMIEFVGSSSSCEREWKEEGFGN-SSQLPE----YKEGFENSMSFTSHDMTL 242
            G GENS AMIEFVGSSSSC  EWKEEGFGN SSQL E    YKEGFENSMSFTSH+MTL
Sbjct: 268 SG-GENSIAMIEFVGSSSSC-HEWKEEGFGNSSSQLQEDHHQYKEGFENSMSFTSHEMTL 327

Query: 243 SIEAT--------------WTAESLRTKEAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXX 302
           SIEAT                                      XXXXXXXXXXXXXXXXX
Sbjct: 328 SIEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387

Query: 303 XXXXXXXXXXXXXXXXXKNYWNSILNLVNSSPSNSSIF 319
           XXXXXXXXXXXXXXXX KNYWNSILNLVNSSPS+SSIF
Sbjct: 388 XXXXXXXXXXXXXXXXNKNYWNSILNLVNSSPSDSSIF 398

[Close]

BLAST of Carg04371 vs. TrEMBL
Match: tr|A0A2K1X581|A0A2K1X581_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G086300v3 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 201/332 (60.54%), Postives = 226/332 (68.07%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHK KNDALL+ DGQ K AANLS
Sbjct: 132 RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKSKNDALLSIDGQSKNAANLS 191

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H+AQWESARLEAEARLVRES+LR+ +    L     P  FP S SS  +++  L      
Sbjct: 192 HMAQWESARLEAEARLVRESKLRSQSIQHQLSS-TTPGYFPGSGSSPGSTSSTL------ 251

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
            A   RSL+ALKAWN+GWSKS+EG  G L  GIG  LESPTSTLTFSEN  PVM +G   
Sbjct: 252 -AQPPRSLDALKAWNDGWSKSSEGNGGGLNMGIGDVLESPTSTLTFSENAPPVMNSG-AV 311

Query: 183 GENSAAMIEFVGSSSSCERE-WKEEG------FGNSSQLPEYKEGFENSMSFTS--HDMT 242
           GENS +MIEFVG+S S E    KEEG        NSS LP      +NS+S TS  HDMT
Sbjct: 312 GENSISMIEFVGTSGSTETGIIKEEGEHDWKSLSNSSHLP------DNSVSLTSTLHDMT 371

Query: 243 LSIEATWTAESLRTK-------EAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXX 302
           +S+EA W  +SLR         + + EEGFT+LLL++                XXXXXXX
Sbjct: 372 ISMEAPWNPDSLRANCDNVHVGKNVMEEGFTHLLLSD---SAERSLSDDGKDSXXXXXXX 431

Query: 303 XXXXXXXXXXXKNYWNSILNLVNSSPSNSSIF 319
           XXXXXX     KNYWNSILNLVNSSPSNS +F
Sbjct: 432 XXXXXXYYEDNKNYWNSILNLVNSSPSNSPMF 445

[Close]

BLAST of Carg04371 vs. TrEMBL
Match: tr|A0A2I4E3I7|A0A2I4E3I7_9ROSI (snRNA-activating protein complex subunit 4-like OS=Juglans regia OX=51240 GN=LOC108985936 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 185/340 (54.41%), Postives = 205/340 (60.29%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALL+GDGQ K AANLS
Sbjct: 88  RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSGDGQSKSAANLS 147

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H+AQWESARLEAEARLVRES+LR   SHS   QL N                      S 
Sbjct: 148 HMAQWESARLEAEARLVRESKLR---SHSLQHQLGN----------------------SG 207

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGI--LTRGIGGDLESPTSTLTFSENVLPVMATGC 182
             M  R  + LK WN  WSKS EG  G+  +T   G DLESPTSTLTFSEN  PV+  G 
Sbjct: 208 VPMPPRCQDILKGWNGAWSKSTEGNGGVPAVTAINGSDLESPTSTLTFSENAPPVLTAGV 267

Query: 183 GEGENSAAMIEFVGSSSSC-----------EREWKEEGFGNSSQLPEYKEGFENSMSFTS 242
             G+NS  MIEFVGS+S             E  WK   F  S+ + EYKEG ENS+SFTS
Sbjct: 268 --GDNSMPMIEFVGSTSGSSETGAVKEEAEEDNWKP--FEISTHVAEYKEGIENSLSFTS 327

Query: 243 --HDMTLSIEATWTAESL-RTK--------EAIAEEGFTNLLLNNXXXXXXXXXXXXXXX 302
             HD+++S+E TWT ESL RT           + +EGFTNLLLNN               
Sbjct: 328 SLHDLSISMEGTWTPESLIRTSGTGHIHFGNVMGDEGFTNLLLNN-------SDDQISLS 387

Query: 303 XXXXXXXXXXXXXXXXXXXKNYWNSILNLVNSSPSNSSIF 319
                              KNYWNSILNLVNSSPS+S +F
Sbjct: 388 DGGDDSDHNGSGSEYYEDNKNYWNSILNLVNSSPSDSPMF 391

[Close]

BLAST of Carg04371 vs. TrEMBL
Match: tr|A0A2K1X567|A0A2K1X567_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G086300v3 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74
Identity = 199/332 (59.94%), Postives = 222/332 (66.87%), Query Frame = 0


Query: 3   RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLTGDGQPKCAANLS 62
           RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHK KNDALL+ DGQ K AANLS
Sbjct: 132 RWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKSKNDALLSIDGQSKNAANLS 191

Query: 63  HIAQWESARLEAEARLVRESRLRNNNSHSSLQQLPNPPCFPPSSSSTSTSAQLLPNSDSP 122
           H+AQWESARLEAEARLVRES+LR+ +    L         P S+SST             
Sbjct: 192 HMAQWESARLEAEARLVRESKLRSQSIQHQLSSTT-----PGSTSST------------- 251

Query: 123 AAMASRSLEALKAWNNGWSKSAEGASGILTRGIGGDLESPTSTLTFSENVLPVMATGCGE 182
            A   RSL+ALKAWN+GWSKS+EG  G L  GIG  LESPTSTLTFSEN  PVM +G   
Sbjct: 252 LAQPPRSLDALKAWNDGWSKSSEGNGGGLNMGIGDVLESPTSTLTFSENAPPVMNSG-AV 311

Query: 183 GENSAAMIEFVGSSSSCERE-WKEEG------FGNSSQLPEYKEGFENSMSFTS--HDMT 242
           GENS +MIEFVG+S S E    KEEG        NSS LP      +NS+S TS  HDMT
Sbjct: 312 GENSISMIEFVGTSGSTETGIIKEEGEHDWKSLSNSSHLP------DNSVSLTSTLHDMT 371

Query: 243 LSIEATWTAESLRTK-------EAIAEEGFTNLLLNNXXXXXXXXXXXXXXXXXXXXXXX 302
           +S+EA W  +SLR         + + EEGFT+LLL++                XXXXXXX
Sbjct: 372 ISMEAPWNPDSLRANCDNVHVGKNVMEEGFTHLLLSD---SAERSLSDDGKDSXXXXXXX 431

Query: 303 XXXXXXXXXXXKNYWNSILNLVNSSPSNSSIF 319
           XXXXXX     KNYWNSILNLVNSSPSNS +F
Sbjct: 432 XXXXXXYYEDNKNYWNSILNLVNSSPSNSPMF 435

The following BLAST results are available for this feature:

BLAST of Carg04371 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921395.1	1.3e-148	95.57	transcription factor MYB106-like [Cucurbita moschata]	[more]
XP_023544429.1	6.5e-148	98.73	transcription factor MYB106-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989899.1	2.1e-146	96.84	transcription factor MYB106-like [Cucurbita maxima]	[more]
XP_022939189.1	1.3e-119	76.54	transcription factor MYB106-like [Cucurbita moschata] >XP_022939190.1 transcript...	[more]
XP_023550452.1	1.2e-117	75.62	transcription factor MYB16-like [Cucurbita pepo subsp. pepo] >XP_023550453.1 tra...	[more]

BLAST of Carg04371 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01140.1	3.3e-37	52.81	myb domain protein 106	[more]
AT5G15310.1	2.6e-34	50.26	myb domain protein 16	[more]
AT3G61250.1	7.4e-21	57.14	myb domain protein 17	[more]
AT5G61420.2	5.5e-16	63.33	myb domain protein 28	[more]
AT5G16600.1	7.1e-16	45.16	myb domain protein 43	[more]

BLAST of Carg04371 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LE63\|MY106_ARATH	5.9e-36	52.81	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]
sp\|Q9LXF1\|MYB16_ARATH	4.7e-33	50.26	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
sp\|P80074\|MYB1_PHYPA	2.0e-20	60.23	Myb-related protein Pp1 (Fragment) OS=Physcomitrella patens subsp. patens OX=321...	[more]
sp\|Q9M2D9\|MYB17_ARATH	1.3e-19	57.14	Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1	[more]
sp\|Q9SPG2\|MYB28_ARATH	9.9e-15	63.33	Transcription factor MYB28 OS=Arabidopsis thaliana OX=3702 GN=MYB28 PE=1 SV=1	[more]

BLAST of Carg04371 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A061EF18\|A0A061EF18_THECC	1.9e-79	55.49	Myb domain protein 106 OS=Theobroma cacao OX=3641 GN=TCM_018639 PE=4 SV=1	[more]
tr\|A0A0A0KXE9\|A0A0A0KXE9_CUCSA	8.8e-77	67.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G637660 PE=4 SV=1	[more]
tr\|A0A2K1X581\|A0A2K1X581_POPTR	2.0e-76	60.54	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G086300v3 PE=...	[more]
tr\|A0A2I4E3I7\|A0A2I4E3I7_9ROSI	2.8e-75	54.41	snRNA-activating protein complex subunit 4-like OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2K1X567\|A0A2K1X567_POPTR	1.8e-74	59.94	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G086300v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04371-RA	Carg04371-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 3..27 e-value: 5.5E-7 score: 29.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 3..27 e-value: 1.05102E-6 score: 44.1034
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 1..48 e-value: 8.2E-13 score: 50.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..292
None	No IPR available	PANTHER	PTHR10641:SF911	SUBFAMILY NOT NAMED	coord: 2..311
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 2..311
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..31 score: 15.899
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 3..35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04371	Cla010316	Watermelon (97103) v1	carwmB0679
Carg04371	Csa5G637660	Cucumber (Chinese Long) v2	carcuB0708
Carg04371	MELO3C022003	Melon (DHL92) v3.5.1	carmeB0682
Carg04371	ClCG09G018070	Watermelon (Charleston Gray)	carwcgB0657
Carg04371	CSPI05G29070	Wild cucumber (PI 183967)	carcpiB0722
Carg04371	Cucsa.158170	Cucumber (Gy14) v1	carcgyB0763
Carg04371	CmaCh04G027750	Cucurbita maxima (Rimu)	carcmaB0967
Carg04371	CmoCh04G029050	Cucurbita moschata (Rifu)	carcmoB0940
Carg04371	CmoCh15G002700	Cucurbita moschata (Rifu)	carcmoB0936
Carg04371	Lsi02G014700	Bottle gourd (USVL1VR-Ls)	carlsiB623
Carg04371	Cp4.1LG01g22850	Cucurbita pepo (Zucchini)	carcpeB0965
Carg04371	Cp4.1LG13g08530	Cucurbita pepo (Zucchini)	carcpeB0962
Carg04371	CsGy0G000440	Cucumber (Gy14) v2	carcgybB0679
Carg04371	CsGy5G028480	Cucumber (Gy14) v2	carcgybB0686
Carg04371	MELO3C022003.2	Melon (DHL92) v3.6.1	carmedB0694
Carg04371	CsaV3_5G038180	Cucumber (Chinese Long) v3	carcucB0725
Carg04371	Cla97C10G198200	Watermelon (97103) v2	carwmbB0709
Carg04371	Cla97C09G179450	Watermelon (97103) v2	carwmbB0714
Carg04371	Bhi06G000312	Wax gourd	carwgoB0801

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04371	Carg02240	Silver-seed gourd	carcarB306
Carg04371	Carg09797	Silver-seed gourd	carcarB445

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04371	Silver-seed gourd	carcarB062
Carg04371	Silver-seed gourd	carcarB115
Carg04371	Cucumber (Gy14) v2	carcgybB0680
Carg04371	Cucumber (Gy14) v1	carcgyB0761
Carg04371	Cucurbita maxima (Rimu)	carcmaB0961
Carg04371	Cucurbita pepo (Zucchini)	carcpeB0968
Carg04371	Wild cucumber (PI 183967)	carcpiB0716
Carg04371	Cucumber (Chinese Long) v3	carcucB0719
Carg04371	Melon (DHL92) v3.6.1	carmedB0701
Carg04371	Bottle gourd (USVL1VR-Ls)	carlsiB625
Carg04371	Melon (DHL92) v3.5.1	carmeB0685
Carg04371	Melon (DHL92) v3.5.1	carmeB0688
Carg04371	Melon (DHL92) v3.6.1	carmedB0697
Carg04371	Watermelon (Charleston Gray)	carwcgB0662
Carg04371	Watermelon (97103) v1	carwmB0684
Carg04371	Watermelon (97103) v2	carwmbB0712
Carg04371	Wax gourd	carwgoB0808