Carg04307 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCAGACTACTTTCAATGCTCCAGCTGGTAGCTCACCCCTGGCGTTAGATATGAGTAGCATGGGGAAAGGACAAATATGGTTAAATGGCCAGAGCATTGGGCGCTACTGGTCTGCTTACAAGGCATCTGGTTCTTGTGATTACTGCAATTATACTGGCACATACAATGAGAATAAATGCTTGAGTAACTGCGGCGAGGCGTCTCAGAGATGGTAGGCAACAATATCCCAAAATGAATCCTAACTCTTCTTCTGTAGTTCTTCAAACATTGATGAACTAACTGCTCTTTGATCATTGTTTTTGTTAGGTATCATGTTCCTCGTTCTTGGTTAAACCCGACAGGAAATCTGTTGGTTGTGTTTGAAGAATGGGGCGGCGACCCGAACGGAATTTCTCTGGTTAGAAGAGATGTGGATACTGTGTGTGTCAGTATCAATGAGTGGCAACCAACGCTTATGAACTGGCAGATGCAAGCCTCAGGTAAAGTTAACAAGCCCCTGAGGCCAAAAGCTCATCTGTCCTGTGGCCCTGGCCAGAAGATTTCATCAGTCAAGTTTGCTAGCTTCGGAACGCCACAAGGCGAATGTGGAAGTTTCCGGGAGGGAAGCTGCCACGCCCATCGCTCATATGATGCTTTTCAGCGGGTAAGTATGACTTAGGGAAATGAGTTTAAGCCATGTTAGCCATCTACTTAGGATTTAGTATCGTATGAGTTACTTTGACAACCAAATGTAGTAGACCTGGTTCAAGTCATGTCTAATTTCCCTGGCTCTTGCAGACATGCGTTGGTCAAAACTTCTGCGCGGTAACGGTGGCGCCAGAGATGTTCGGAGGCGACCCGTGTCCGAACGTGATGAAGAAACTGTCGGTGGAAGTCGTGTGCAGCTGATGGATTAGTTATTGGTTGAAGTTGGAAGAGTAGAATGAAGCAAAACACAGTCATTCATTATGGCAGATCTCCATTGGTGAAGTTGTACAAAATATACGACAGAGAGACTGATGGAAGAGAAGCTATTATTGAGATTGGGATTAAGGGTAAATAGTTAGCTGTTTTTGTTGGGATTCTCACCGGCCAGTCACCATATTATTATAGAAAAAGTTAGGAGAAATGAAATTATTGTAGGTTTGTTTGTGTCACAGAAGCACTTTGAGGTTTTAATTATTGAATCCATGTGCTTCTGTACTTATCACTTTTTTTCCTTCAAGTTCTTGAAAGAAAATGGAAGCCTCTGGCTTCTGTTCATGTCTACTCTGTCACGTTAACGATGTCTTAATCAATTAAGCTCTTAGATCGATGCTTTCTTATCTTTTAATTTAGTTGGATATTTAGGATGTTTTGATGGCTCCGACATTCCCCTCCATCTCTTATGATACAATTACGTTTCTTCCAGCTTCCAAAAGTGAATTATCTCTACCGACTTATACAAATTCTTTCCGCATGTTTTATCCTCATTCACGCAACTTTTATCCCATTCC ATGATTCAGACTACTTTCAATGCTCCAGCTGGTAGCTCACCCCTGGCGTTAGATATGAGTAGCATGGGGAAAGGACAAATATGGTTAAATGGCCAGAGCATTGGGCGCTACTGGTCTGCTTACAAGGCATCTGGTTCTTGTGATTACTGCAATTATACTGGCACATACAATGAGAATAAATGCTTGAGTAACTGCGGCGAGGCGTCTCAGAGATGGTATCATGTTCCTCGTTCTTGGTTAAACCCGACAGGAAATCTGTTGGTTGTGTTTGAAGAATGGGGCGGCGACCCGAACGGAATTTCTCTGGTTAGAAGAGATGTGGATACTGTGTGTGTCAGTATCAATGAGTGGCAACCAACGCTTATGAACTGGCAGATGCAAGCCTCAGGTAAAGTTAACAAGCCCCTGAGGCCAAAAGCTCATCTGTCCTGTGGCCCTGGCCAGAAGATTTCATCAGTCAAGTTTGCTAGCTTCGGAACGCCACAAGGCGAATGTGGAAGTTTCCGGGAGGGAAGCTGCCACGCCCATCGCTCATATGATGCTTTTCAGCGGACATGCGTTGGTCAAAACTTCTGCGCGGTAACGGTGGCGCCAGAGATGTTCGGAGGCGACCCGTGTCCGAACGTGATGAAGAAACTGTCGGTGGAAGTCGTGTGCAGCTGATGGATTAGTTATTGGTTGAAGTTGGAAGAGTAGAATGAAGCAAAACACAGTCATTCATTATGGCAGATCTCCATTGGTGAAGTTGTACAAAATATACGACAGAGAGACTGATGGAAGAGAAGCTATTATTGAGATTGGGATTAAGGGTAAATAGTTAGCTGTTTTTGTTGGGATTCTCACCGGCCAGTCACCATATTATTATAGAAAAAGTTAGGAGAAATGAAATTATTGTAGGTTTGTTTGTGTCACAGAAGCACTTTGAGGTTTTAATTATTGAATCCATGTGCTTCTGTACTTATCACTTTTTTTCCTTCAAGTTCTTGAAAGAAAATGGAAGCCTCTGGCTTCTGTTCATGTCTACTCTGTCACGTTAACGATGTCTTAATCAATTAAGCTCTTAGATCGATGCTTTCTTATCTTTTAATTTAGTTGGATATTTAGGATGTTTTGATGGCTCCGACATTCCCCTCCATCTCTTATGATACAATTACGTTTCTTCCAGCTTCCAAAAGTGAATTATCTCTACCGACTTATACAAATTCTTTCCGCATGTTTTATCCTCATTCACGCAACTTTTATCCCATTCC ATGATTCAGACTACTTTCAATGCTCCAGCTGGTAGCTCACCCCTGGCGTTAGATATGAGTAGCATGGGGAAAGGACAAATATGGTTAAATGGCCAGAGCATTGGGCGCTACTGGTCTGCTTACAAGGCATCTGGTTCTTGTGATTACTGCAATTATACTGGCACATACAATGAGAATAAATGCTTGAGTAACTGCGGCGAGGCGTCTCAGAGATGGTATCATGTTCCTCGTTCTTGGTTAAACCCGACAGGAAATCTGTTGGTTGTGTTTGAAGAATGGGGCGGCGACCCGAACGGAATTTCTCTGGTTAGAAGAGATGTGGATACTGTGTGTGTCAGTATCAATGAGTGGCAACCAACGCTTATGAACTGGCAGATGCAAGCCTCAGGTAAAGTTAACAAGCCCCTGAGGCCAAAAGCTCATCTGTCCTGTGGCCCTGGCCAGAAGATTTCATCAGTCAAGTTTGCTAGCTTCGGAACGCCACAAGGCGAATGTGGAAGTTTCCGGGAGGGAAGCTGCCACGCCCATCGCTCATATGATGCTTTTCAGCGGACATGCGTTGGTCAAAACTTCTGCGCGGTAACGGTGGCGCCAGAGATGTTCGGAGGCGACCCGTGTCCGAACGTGATGAAGAAACTGTCGGTGGAAGTCGTGTGCAGCTGA MIQTTFNAPAGSSPLALDMSSMGKGQIWLNGQSIGRYWSAYKASGSCDYCNYTGTYNENKCLSNCGEASQRWYHVPRSWLNPTGNLLVVFEEWGGDPNGISLVRRDVDTVCVSINEWQPTLMNWQMQASGKVNKPLRPKAHLSCGPGQKISSVKFASFGTPQGECGSFREGSCHAHRSYDAFQRTCVGQNFCAVTVAPEMFGGDPCPNVMKKLSVEVVCS
BLAST of Carg04307 vs. NCBI nr
Match: XP_022997824.1 (beta-galactosidase 1-like [Cucurbita maxima]) HSP 1 Score: 468.8 bits (1205), Expect = 1.0e-128 Identity = 214/218 (98.17%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Carg04307 vs. NCBI nr
Match: XP_023523770.1 (beta-galactosidase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468.0 bits (1203), Expect = 1.8e-128 Identity = 213/218 (97.71%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Carg04307 vs. NCBI nr
Match: XP_022949187.1 (beta-galactosidase 1-like [Cucurbita moschata]) HSP 1 Score: 466.1 bits (1198), Expect = 6.7e-128 Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Carg04307 vs. NCBI nr
Match: XP_004146823.1 (PREDICTED: beta-galactosidase 1 [Cucumis sativus]) HSP 1 Score: 442.6 bits (1137), Expect = 7.9e-121 Identity = 198/218 (90.83%), Postives = 209/218 (95.87%), Query Frame = 0
BLAST of Carg04307 vs. NCBI nr
Match: XP_023527504.1 (beta-galactosidase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.0 bits (1133), Expect = 2.3e-120 Identity = 198/218 (90.83%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Carg04307 vs. TAIR10
Match: AT3G13750.1 (beta galactosidase 1) HSP 1 Score: 393.3 bits (1009), Expect = 1.0e-109 Identity = 171/218 (78.44%), Postives = 197/218 (90.37%), Query Frame = 0
BLAST of Carg04307 vs. TAIR10
Match: AT4G36360.1 (beta-galactosidase 3) HSP 1 Score: 297.4 bits (760), Expect = 7.5e-81 Identity = 127/218 (58.26%), Postives = 167/218 (76.61%), Query Frame = 0
BLAST of Carg04307 vs. TAIR10
Match: AT2G28470.1 (beta-galactosidase 8) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55 Identity = 104/223 (46.64%), Postives = 143/223 (64.13%), Query Frame = 0
BLAST of Carg04307 vs. TAIR10
Match: AT2G32810.1 (beta galactosidase 9) HSP 1 Score: 202.6 bits (514), Expect = 2.5e-52 Identity = 97/224 (43.30%), Postives = 132/224 (58.93%), Query Frame = 0
BLAST of Carg04307 vs. TAIR10
Match: AT4G26140.1 (beta-galactosidase 12) HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44 Identity = 72/103 (69.90%), Postives = 90/103 (87.38%), Query Frame = 0
BLAST of Carg04307 vs. Swiss-Prot
Match: sp|Q9SCW1|BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-108 Identity = 171/218 (78.44%), Postives = 197/218 (90.37%), Query Frame = 0
BLAST of Carg04307 vs. Swiss-Prot
Match: sp|P48980|BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 4.0e-100 Identity = 156/218 (71.56%), Postives = 187/218 (85.78%), Query Frame = 0
BLAST of Carg04307 vs. Swiss-Prot
Match: sp|P45582|BGAL_ASPOF (Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 1.8e-95 Identity = 157/222 (70.72%), Postives = 179/222 (80.63%), Query Frame = 0
BLAST of Carg04307 vs. Swiss-Prot
Match: sp|Q8W0A1|BGAL2_ORYSJ (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE=2 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.8e-87 Identity = 137/214 (64.02%), Postives = 164/214 (76.64%), Query Frame = 0
BLAST of Carg04307 vs. Swiss-Prot
Match: sp|Q9SCV9|BGAL3_ARATH (Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.3e-79 Identity = 127/218 (58.26%), Postives = 167/218 (76.61%), Query Frame = 0
BLAST of Carg04307 vs. TrEMBL
Match: tr|A0A1S3BIR6|A0A1S3BIR6_CUCME (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103490020 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 2.6e-120 Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of Carg04307 vs. TrEMBL
Match: tr|A0A2I4EDN8|A0A2I4EDN8_9ROSI (Beta-galactosidase OS=Juglans regia OX=51240 GN=LOC108988647 PE=3 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 7.3e-115 Identity = 186/218 (85.32%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of Carg04307 vs. TrEMBL
Match: tr|A0A2I4GHK7|A0A2I4GHK7_9ROSI (Beta-galactosidase OS=Juglans regia OX=51240 GN=LOC109007920 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.6e-114 Identity = 186/218 (85.32%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of Carg04307 vs. TrEMBL
Match: tr|M5XH07|M5XH07_PRUPE (Beta-galactosidase OS=Prunus persica OX=3760 GN=PRUPE_3G050200 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 2.0e-112 Identity = 181/218 (83.03%), Postives = 200/218 (91.74%), Query Frame = 0
BLAST of Carg04307 vs. TrEMBL
Match: tr|A0A2C9UXV6|A0A2C9UXV6_MANES (Beta-galactosidase OS=Manihot esculenta OX=3983 GN=MANES_11G026900 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 4.5e-112 Identity = 179/218 (82.11%), Postives = 201/218 (92.20%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |