Carg04299 (gene) Silver-seed gourd

Overview
NameCarg04299
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGlutamate receptor
LocationCucurbita_argyrosperma_scaffold_044 : 1274260 .. 1274631 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATGGAGTTCTGCAAGATATTGAAAACAAATGGTTTAAGAGCAATATCAGCAGCCCTGACCCCAATAGCTTGATTTCCACCACACTTGGGCTCGAAAGCTTTTGGGGGTTGTTTCTTCTTTCAGGAGCTGTATCTTTATCTGCAGTCATTATAGCCCTGGCCAGATTTGTCCATGAACGCAGACATGACTTCAACCTTTCCACTGACTCAATGTGGAAAAGGTTTCTTCTTCTCATGAAAAATTTCGACCAGAAAGACCACACTTCACCCGCGTTTAGAAGGAATTCTCGAGACGAAAACCAAGACGAAGGCCGAGACGAAAGCCGGGAAGCTCATCCCAGCCCTTCCTGTGATTCAAACTACTGA

mRNA sequence

ATGGAGAATGGAGTTCTGCAAGATATTGAAAACAAATGGTTTAAGAGCAATATCAGCAGCCCTGACCCCAATAGCTTGATTTCCACCACACTTGGGCTCGAAAGCTTTTGGGGGTTGTTTCTTCTTTCAGGAGCTGTATCTTTATCTGCAGTCATTATAGCCCTGGCCAGATTTGTCCATGAACGCAGACATGACTTCAACCTTTCCACTGACTCAATGTGGAAAAGGTTTCTTCTTCTCATGAAAAATTTCGACCAGAAAGACCACACTTCACCCGCGTTTAGAAGGAATTCTCGAGACGAAAACCAAGACGAAGGCCGAGACGAAAGCCGGGAAGCTCATCCCAGCCCTTCCTGTGATTCAAACTACTGA

Coding sequence (CDS)

ATGGAGAATGGAGTTCTGCAAGATATTGAAAACAAATGGTTTAAGAGCAATATCAGCAGCCCTGACCCCAATAGCTTGATTTCCACCACACTTGGGCTCGAAAGCTTTTGGGGGTTGTTTCTTCTTTCAGGAGCTGTATCTTTATCTGCAGTCATTATAGCCCTGGCCAGATTTGTCCATGAACGCAGACATGACTTCAACCTTTCCACTGACTCAATGTGGAAAAGGTTTCTTCTTCTCATGAAAAATTTCGACCAGAAAGACCACACTTCACCCGCGTTTAGAAGGAATTCTCGAGACGAAAACCAAGACGAAGGCCGAGACGAAAGCCGGGAAGCTCATCCCAGCCCTTCCTGTGATTCAAACTACTGA

Protein sequence

MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVHERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDENQDEGRDESREAHPSPSCDSNY
Homology
[Close]
BLAST of Carg04299 vs. NCBI nr
Match: XP_023523601.1 (glutamate receptor 2.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           MENGVLQ+IENKWFKSNISSPDPNSLIST LGLESFWGLFLLSGAVSLSAVIIALARFVH
Sbjct: 786 MENGVLQEIENKWFKSNISSPDPNSLISTRLGLESFWGLFLLSGAVSLSAVIIALARFVH 845

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXAHPSPSCD 120
           ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRD XXXXXXXXXXXAHPSP+ D
Sbjct: 846 ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDXXXXXXXXXXXXAHPSPTSD 905

Query: 121 SNY 124
           SNY
Sbjct: 906 SNY 908

[Close]
BLAST of Carg04299 vs. NCBI nr
Match: XP_022997901.1 (glutamate receptor 2.7-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 8.3e-51
Identity = 117/129 (90.70%), Postives = 120/129 (93.02%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           MENGVLQ+IENKWFKSNISSPDPNSLISTT+GLESFWGLFLLSGAVSLSAVIIALARFVH
Sbjct: 786 MENGVLQEIENKWFKSNISSPDPNSLISTTIGLESFWGLFLLSGAVSLSAVIIALARFVH 845

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRD------EXXXXXXXXXXXAH 120
           ERRHDFNLSTDSMWKR LLLMKNFDQKDHTSPAFRRNS+D       XXXXXXXXXXX H
Sbjct: 846 ERRHDFNLSTDSMWKRILLLMKNFDQKDHTSPAFRRNSQDXXXXXXXXXXXXXXXXXXXH 905

Query: 121 PSPSCDSNY 124
           PSPSCDSNY
Sbjct: 906 PSPSCDSNY 914

[Close]
BLAST of Carg04299 vs. NCBI nr
Match: XP_022948814.1 (glutamate receptor 2.7-like [Cucurbita moschata])

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH
Sbjct: 782 MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 841

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSR 100
           ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSR
Sbjct: 842 ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSR 880

[Close]
BLAST of Carg04299 vs. NCBI nr
Match: XP_008447592.1 (PREDICTED: glutamate receptor 2.7-like [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37
Identity = 81/123 (65.85%), Postives = 96/123 (78.05%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           ME+G+LQ+IE+KWFK NISSPDPNSLISTTLGLESFWGLFL++GAVS  A+I ALA F++
Sbjct: 784 MESGILQEIEDKWFKGNISSPDPNSLISTTLGLESFWGLFLVTGAVSSFALITALASFLY 843

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXAHPSPSCD 120
           E RH   LST SMWKRFLLL+K FD+KD +SPA R+  +DE            HPSPSCD
Sbjct: 844 EHRHVLKLSTVSMWKRFLLLLKIFDEKDMSSPALRKKRQDEIPEVKDVRFEPGHPSPSCD 903

Query: 121 SNY 124
           S+Y
Sbjct: 904 SSY 906

[Close]
BLAST of Carg04299 vs. NCBI nr
Match: XP_022148291.1 (glutamate receptor 2.7-like [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           ME+GVL++IE++WFK NISSPDPNSLISTTLGLESFWGLFL+SGA S SA+I+ALA F+H
Sbjct: 792 MESGVLKEIEDRWFKGNISSPDPNSLISTTLGLESFWGLFLVSGAASSSALIVALAGFLH 851

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXAHPSPSCD 120
           +++H   LST SMW+RFLLL+K+FDQKD  SPA R+N  DE            HPSPSCD
Sbjct: 852 KQKHVLKLSTVSMWERFLLLLKSFDQKDPNSPALRKNRNDE-SPEVKDVRFEPHPSPSCD 911

Query: 121 SNY 124
           S+Y
Sbjct: 912 SSY 913

[Close]
BLAST of Carg04299 vs. TAIR10
Match: AT2G29110.1 (glutamate receptor 2.8)

HSP 1 Score: 80.5 bits (197), Expect = 8.0e-16
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 0 

Query: 6   LQDIENKWFKSNISSPDPNSLISTT-LGLESFWGLFLLSGAVSLSAVIIALARFVHERRH 65
           +Q IENKWF      PDP + +S+  L L SFWGLFL++G  S  A++I +  F++E RH
Sbjct: 786 MQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYENRH 845

Query: 66  DF-NLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
              + S DS+W++   L +NFD+KD  S  F+ ++
Sbjct: 846 TLCDDSEDSIWRKLTSLFRNFDEKDIKSHTFKSSA 880

[Close]
BLAST of Carg04299 vs. TAIR10
Match: AT2G29120.1 (glutamate receptor 2.7)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 6   LQDIENKWFKSNISSPDPN-SLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVHERRH 65
           +Q IENKWFK   + PD N SL S  L L SFWGLFL++G  S  A++I +A F++E +H
Sbjct: 791 MQHIENKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKH 850

Query: 66  D-FNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
             F+ S +S   +   L++NFD+KD  S  F+ N+
Sbjct: 851 TLFDDSENSFRGKLKFLVRNFDEKDIKSHMFKENA 885

[Close]
BLAST of Carg04299 vs. TAIR10
Match: AT2G29100.1 (glutamate receptor 2.9)

HSP 1 Score: 73.6 bits (179), Expect = 9.8e-14
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDP-NSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 61
           +N V Q IE++WF      PDP  +L S  L L SF GLFL++G     ++++ +A F++
Sbjct: 774 QNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLY 833

Query: 62  ERRHDF-NLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
           E RH   + S DS+W++   L K FD+KD  S  F+ ++
Sbjct: 834 EHRHTLGDDSEDSLWRKLKFLFKIFDEKDMNSHTFKNSA 872

[Close]
BLAST of Carg04299 vs. TAIR10
Match: AT1G42540.1 (glutamate receptor 3.3)

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 32/105 (30.48%), Postives = 48/105 (45.71%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFV-- 61
           ENG LQ I +KW   N  + +   L S  L L+SFWGLFL+ G   L A+ +   + +  
Sbjct: 795 ENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854

Query: 62  -------------HERRHDFNLSTDSMWKRFLLLMKNFDQKDHTS 92
                         ++ HD +    +  +RFL LM   ++  H S
Sbjct: 855 LYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKEESKHES 899

[Close]
BLAST of Carg04299 vs. TAIR10
Match: AT5G27100.1 (glutamate receptor 2.1)

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05
Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFK-------SNISSPDPNSLIS-TTLGLESFWGLFLLSGAVSLSAVII 61
           E+     +EN WFK         +++PDPN  +S   LG +SFW LFL++  V   A++ 
Sbjct: 782 ESNKANQLENAWFKPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLK 841

Query: 62  ALARFVHERRHDFNLSTDSMWKRF 78
            + +F+ E  +  NL    +W++F
Sbjct: 842 FVYQFLKENPNQRNLRV--LWEKF 863

[Close]
BLAST of Carg04299 vs. Swiss-Prot
Match: sp|Q9C5V5|GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 0 

Query: 6   LQDIENKWFKSNISSPDPNSLISTT-LGLESFWGLFLLSGAVSLSAVIIALARFVHERRH 65
           +Q IENKWF      PDP + +S+  L L SFWGLFL++G  S  A++I +  F++E RH
Sbjct: 786 MQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYENRH 845

Query: 66  DF-NLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
              + S DS+W++   L +NFD+KD  S  F+ ++
Sbjct: 846 TLCDDSEDSIWRKLTSLFRNFDEKDIKSHTFKSSA 880

[Close]
BLAST of Carg04299 vs. Swiss-Prot
Match: sp|Q8LGN0|GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-14
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 6   LQDIENKWFKSNISSPDPN-SLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVHERRH 65
           +Q IENKWFK   + PD N SL S  L L SFWGLFL++G  S  A++I +A F++E +H
Sbjct: 791 MQHIENKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKH 850

Query: 66  D-FNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
             F+ S +S   +   L++NFD+KD  S  F+ N+
Sbjct: 851 TLFDDSENSFRGKLKFLVRNFDEKDIKSHMFKENA 885

[Close]
BLAST of Carg04299 vs. Swiss-Prot
Match: sp|O81078|GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-12
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDP-NSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 61
           +N V Q IE++WF      PDP  +L S  L L SF GLFL++G     ++++ +A F++
Sbjct: 774 QNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLY 833

Query: 62  ERRHDF-NLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNS 99
           E RH   + S DS+W++   L K FD+KD  S  F+ ++
Sbjct: 834 EHRHTLGDDSEDSLWRKLKFLFKIFDEKDMNSHTFKNSA 872

[Close]
BLAST of Carg04299 vs. Swiss-Prot
Match: sp|Q9C8E7|GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana OX=3702 GN=GLR3.3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-06
Identity = 32/105 (30.48%), Postives = 48/105 (45.71%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFV-- 61
           ENG LQ I +KW   N  + +   L S  L L+SFWGLFL+ G   L A+ +   + +  
Sbjct: 795 ENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854

Query: 62  -------------HERRHDFNLSTDSMWKRFLLLMKNFDQKDHTS 92
                         ++ HD +    +  +RFL LM   ++  H S
Sbjct: 855 LYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKEESKHES 899

[Close]
BLAST of Carg04299 vs. Swiss-Prot
Match: sp|O04660|GLR21_ARATH (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04
Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFK-------SNISSPDPNSLIS-TTLGLESFWGLFLLSGAVSLSAVII 61
           E+     +EN WFK         +++PDPN  +S   LG +SFW LFL++  V   A++ 
Sbjct: 782 ESNKANQLENAWFKPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLK 841

Query: 62  ALARFVHERRHDFNLSTDSMWKRF 78
            + +F+ E  +  NL    +W++F
Sbjct: 842 FVYQFLKENPNQRNLRV--LWEKF 863

[Close]
BLAST of Carg04299 vs. TrEMBL
Match: tr|A0A1S3BHT8|A0A1S3BHT8_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103490007 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.9e-38
Identity = 81/123 (65.85%), Postives = 96/123 (78.05%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           ME+G+LQ+IE+KWFK NISSPDPNSLISTTLGLESFWGLFL++GAVS  A+I ALA F++
Sbjct: 784 MESGILQEIEDKWFKGNISSPDPNSLISTTLGLESFWGLFLVTGAVSSFALITALASFLY 843

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXAHPSPSCD 120
           E RH   LST SMWKRFLLL+K FD+KD +SPA R+  +DE            HPSPSCD
Sbjct: 844 EHRHVLKLSTVSMWKRFLLLLKIFDEKDMSSPALRKKRQDEIPEVKDVRFEPGHPSPSCD 903

Query: 121 SNY 124
           S+Y
Sbjct: 904 SSY 906

[Close]
BLAST of Carg04299 vs. TrEMBL
Match: tr|A0A0A0LFU4|A0A0A0LFU4_CUCSA (Glutamate receptor OS=Cucumis sativus OX=3659 GN=Csa_3G849900 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = 0 

Query: 1   MENGVLQDIENKWFKSNISSPDPNSLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVH 60
           ME+GVLQ+IE+KWFK NISSPDPNSLISTTLGLESFWGLFL+ GAVS SA++IALA F++
Sbjct: 631 MESGVLQEIEDKWFKGNISSPDPNSLISTTLGLESFWGLFLVIGAVSSSAIVIALANFLY 690

Query: 61  ERRHDFNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXAHPSPSCD 120
           E RH   LST S+WKR LLL++ F++KD +SPA R+  +DE            HPSPSCD
Sbjct: 691 EHRHVLKLSTISLWKRLLLLLEIFNEKDMSSPALRKKRQDE-TPEVKDVRFEPHPSPSCD 750

Query: 121 SNY 124
           S+Y
Sbjct: 751 SSY 752

[Close]
BLAST of Carg04299 vs. TrEMBL
Match: tr|A0A2P5EV77|A0A2P5EV77_9ROSA (Ionotropic glutamate receptor OS=Trema orientalis OX=63057 GN=TorRG33x02_148010 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.4e-16
Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDPNSLIST-TLGLESFWGLFLLSGAVSLSAVIIALARFVH 61
           E   +++IENKWF S  S PDPN+ +S+ +LGLESFWGLFL+ G  SLSA++I +A F++
Sbjct: 814 EEKTMKNIENKWFGSQTSCPDPNTQVSSNSLGLESFWGLFLIVGIASLSALVIYVATFLY 873

Query: 62  ERRHDFNLSTDS----MWKRFLLLMKNFDQKDHTSPAFRRNSRDEXXXXXXXXXXXA--- 121
           E R     S+D+    +W+R  L+++ FDQKD +S  FR+                A   
Sbjct: 874 EHRQVL-FSSDTPEVPIWRRIRLVLRTFDQKDLSSHTFRKGISQSGDKRTHQDVVDAVEG 933

Query: 122 --------HPSPSCDSN 123
                   HPSPS  SN
Sbjct: 934 SSPGSNVTHPSPSSYSN 949

[Close]
BLAST of Carg04299 vs. TrEMBL
Match: tr|A0A2P5C5D2|A0A2P5C5D2_PARAD (Ionotropic glutamate receptor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_182410 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.7e-15
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 2   ENGVLQDIENKWFKSNISSPDPNSLIST-TLGLESFWGLFLLSGAVSLSAVIIALARFVH 61
           E   +++IE KWF S  S PDPN+ +S+ +LGLESFWGLFL+ G  SLSA++I +A F++
Sbjct: 815 EEKTMKNIEKKWFGSQTSCPDPNTQVSSNSLGLESFWGLFLIVGIASLSALVIYVATFLY 874

Query: 62  ERRHDFNLSTDS----MWKRFLLLMKNFDQKDHTSPAFRR 97
           E R  F  S+D+    +W+R  L+++  DQKD +S  FR+
Sbjct: 875 EHRQVF-FSSDTPAVPIWRRICLVLRTLDQKDLSSHTFRK 913

[Close]
BLAST of Carg04299 vs. TrEMBL
Match: tr|A0A061GHE0|A0A061GHE0_THECC (Glutamate receptor OS=Theobroma cacao OX=3641 GN=TCM_036851 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14
Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 6   LQDIENKWFKSNISSPDPN-SLISTTLGLESFWGLFLLSGAVSLSAVIIALARFVHERRH 65
           ++ IEN W K     PD + S+ S++LGLESFWGLFL++G  S+SA+II  A F+HE+RH
Sbjct: 766 MEQIENFWLKKGTVCPDVDPSVSSSSLGLESFWGLFLIAGTASMSALIIYSAMFLHEQRH 825

Query: 66  D-FNLSTDSMWKRFLLLMKNFDQKDHTSPAFRRN 98
             F     S+W+R  ++ + FDQKD +S  FR++
Sbjct: 826 VLFQFHDTSVWRRIRIMSRIFDQKDLSSHTFRKS 859

The following BLAST results are available for this feature:
BLAST of Carg04299 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023523601.11.5e-5295.93glutamate receptor 2.7-like [Cucurbita pepo subsp. pepo][more]
XP_022997901.18.3e-5190.70glutamate receptor 2.7-like [Cucurbita maxima][more]
XP_022948814.11.7e-48100.00glutamate receptor 2.7-like [Cucurbita moschata][more]
XP_008447592.11.0e-3765.85PREDICTED: glutamate receptor 2.7-like [Cucumis melo][more]
XP_022148291.12.3e-3765.85glutamate receptor 2.7-like [Momordica charantia][more]
BLAST of Carg04299 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29110.18.0e-1642.11glutamate receptor 2.8[more]
AT2G29120.12.3e-1545.26glutamate receptor 2.7[more]
AT2G29100.19.8e-1438.38glutamate receptor 2.9[more]
AT1G42540.12.3e-0730.48glutamate receptor 3.3[more]
AT5G27100.11.7e-0532.14glutamate receptor 2.1[more]
BLAST of Carg04299 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C5V5|GLR28_ARATH1.4e-1442.11Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2[more]
sp|Q8LGN0|GLR27_ARATH4.2e-1445.26Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3[more]
sp|O81078|GLR29_ARATH1.8e-1238.38Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1[more]
sp|Q9C8E7|GLR33_ARATH4.2e-0630.48Glutamate receptor 3.3 OS=Arabidopsis thaliana OX=3702 GN=GLR3.3 PE=2 SV=1[more]
sp|O04660|GLR21_ARATH3.0e-0432.14Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2[more]
BLAST of Carg04299 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BHT8|A0A1S3BHT8_CUCME6.9e-3865.85Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103490007 PE=3 SV=1[more]
tr|A0A0A0LFU4|A0A0A0LFU4_CUCSA1.1e-3564.23Glutamate receptor OS=Cucumis sativus OX=3659 GN=Csa_3G849900 PE=3 SV=1[more]
tr|A0A2P5EV77|A0A2P5EV77_9ROSA7.4e-1640.88Ionotropic glutamate receptor OS=Trema orientalis OX=63057 GN=TorRG33x02_148010 ... [more]
tr|A0A2P5C5D2|A0A2P5C5D2_PARAD3.7e-1547.00Ionotropic glutamate receptor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_182... [more]
tr|A0A061GHE0|A0A061GHE0_THECC4.1e-1446.81Glutamate receptor OS=Theobroma cacao OX=3641 GN=TCM_036851 PE=3 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04299-RACarg04299-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.190.10coord: 1..29
e-value: 2.0E-7
score: 32.0
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 30..55
e-value: 2.0E-7
score: 32.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..115
NoneNo IPR availablePANTHERPTHR43891:SF3GLUTAMATE RECEPTOR 1.1-RELATEDcoord: 2..109
NoneNo IPR availablePANTHERPTHR43891FAMILY NOT NAMEDcoord: 2..109

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04299Silver-seed gourdcarcarB042
Carg04299Silver-seed gourdcarcarB102
Carg04299Silver-seed gourdcarcarB139
Carg04299Silver-seed gourdcarcarB233
Carg04299Silver-seed gourdcarcarB234
Carg04299Silver-seed gourdcarcarB238
Carg04299Silver-seed gourdcarcarB240
Carg04299Cucumber (Gy14) v2carcgybB0211
Carg04299Cucumber (Gy14) v2carcgybB0219
Carg04299Cucumber (Gy14) v1carcgyB0239
Carg04299Cucumber (Gy14) v1carcgyB0246
Carg04299Cucumber (Gy14) v1carcgyB0248
Carg04299Cucurbita maxima (Rimu)carcmaB0270
Carg04299Cucurbita maxima (Rimu)carcmaB0276
Carg04299Cucurbita maxima (Rimu)carcmaB0277
Carg04299Cucurbita maxima (Rimu)carcmaB0278
Carg04299Cucurbita maxima (Rimu)carcmaB0282
Carg04299Cucurbita maxima (Rimu)carcmaB0283
Carg04299Cucurbita moschata (Rifu)carcmoB0277
Carg04299Cucurbita moschata (Rifu)carcmoB0279
Carg04299Cucurbita moschata (Rifu)carcmoB0283
Carg04299Cucurbita moschata (Rifu)carcmoB0284
Carg04299Cucurbita moschata (Rifu)carcmoB0285
Carg04299Cucurbita moschata (Rifu)carcmoB0289
Carg04299Cucurbita pepo (Zucchini)carcpeB0280
Carg04299Cucurbita pepo (Zucchini)carcpeB0283
Carg04299Cucurbita pepo (Zucchini)carcpeB0284
Carg04299Cucurbita pepo (Zucchini)carcpeB0285
Carg04299Cucurbita pepo (Zucchini)carcpeB0287
Carg04299Cucurbita pepo (Zucchini)carcpeB0290
Carg04299Wild cucumber (PI 183967)carcpiB0237
Carg04299Wild cucumber (PI 183967)carcpiB0224
Carg04299Wild cucumber (PI 183967)carcpiB0229
Carg04299Cucumber (Chinese Long) v2carcuB0216
Carg04299Cucumber (Chinese Long) v2carcuB0217
Carg04299Cucumber (Chinese Long) v2carcuB0222
Carg04299Cucumber (Chinese Long) v2carcuB0230
Carg04299Cucumber (Chinese Long) v3carcucB0223
Carg04299Cucumber (Chinese Long) v3carcucB0226
Carg04299Cucumber (Chinese Long) v3carcucB0234
Carg04299Bottle gourd (USVL1VR-Ls)carlsiB175
Carg04299Bottle gourd (USVL1VR-Ls)carlsiB177
Carg04299Bottle gourd (USVL1VR-Ls)carlsiB180
Carg04299Bottle gourd (USVL1VR-Ls)carlsiB182
Carg04299Melon (DHL92) v3.5.1carmeB0202
Carg04299Melon (DHL92) v3.5.1carmeB0203
Carg04299Melon (DHL92) v3.5.1carmeB0204
Carg04299Melon (DHL92) v3.5.1carmeB0209
Carg04299Melon (DHL92) v3.6.1carmedB0207
Carg04299Melon (DHL92) v3.6.1carmedB0208
Carg04299Melon (DHL92) v3.6.1carmedB0209
Carg04299Melon (DHL92) v3.6.1carmedB0214
Carg04299Watermelon (Charleston Gray)carwcgB0189
Carg04299Watermelon (Charleston Gray)carwcgB0192
Carg04299Watermelon (Charleston Gray)carwcgB0196
Carg04299Watermelon (Charleston Gray)carwcgB0199
Carg04299Watermelon (97103) v1carwmB0186
Carg04299Watermelon (97103) v1carwmB0190
Carg04299Watermelon (97103) v1carwmB0192
Carg04299Watermelon (97103) v1carwmB0195
Carg04299Watermelon (97103) v2carwmbB0201
Carg04299Watermelon (97103) v2carwmbB0203
Carg04299Watermelon (97103) v2carwmbB0205
Carg04299Watermelon (97103) v2carwmbB0208
Carg04299Wax gourdcarwgoB0249
Carg04299Wax gourdcarwgoB0254
Carg04299Wax gourdcarwgoB0255