Carg04237 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04237
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plant/F18B13-26 protein
Location	Cucurbita_argyrosperma_scaffold_044 : 991622 .. 991978 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTTGCAGAGATCTGCTGTTTCTTTTCGAAGGCAAGGCTCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGCGAATTGAAGCAAACCGCCGCCGCCGCGGCGGAGAAAGAATCGGAGGAGAATCCGGACGCAAAATCGACTACACCGGCGGTGGCACTGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGAACCGGGAAAGTGTCTCCGGCGATCGAGCCGCCGTCGCCGAAGGTCTCTGCCTGTGGATTCTGCAGCGCCTTTGGGAAACCGGCGAAGAAGAGCCGCCGGACGAAAACCGGTAAGCGTAGATCGCGATAA

mRNA sequence

ATGGAGGGTTTGCAGAGATCTGCTGTTTCTTTTCGAAGGCAAGGCTCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGCGAATTGAAGCAAACCGCCGCCGCCGCGGCGGAGAAAGAATCGGAGGAGAATCCGGACGCAAAATCGACTACACCGGCGGTGGCACTGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGAACCGGGAAAGTGTCTCCGGCGATCGAGCCGCCGTCGCCGAAGGTCTCTGCCTGTGGATTCTGCAGCGCCTTTGGGAAACCGGCGAAGAAGAGCCGCCGGACGAAAACCGGTAAGCGTAGATCGCGATAA

Coding sequence (CDS)

ATGGAGGGTTTGCAGAGATCTGCTGTTTCTTTTCGAAGGCAAGGCTCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGCGAATTGAAGCAAACCGCCGCCGCCGCGGCGGAGAAAGAATCGGAGGAGAATCCGGACGCAAAATCGACTACACCGGCGGTGGCACTGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGAACCGGGAAAGTGTCTCCGGCGATCGAGCCGCCGTCGCCGAAGGTCTCTGCCTGTGGATTCTGCAGCGCCTTTGGGAAACCGGCGAAGAAGAGCCGCCGGACGAAAACCGGTAAGCGTAGATCGCGATAA

Protein sequence

MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPINTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR

Homology

[Close]

BLAST of Carg04237 vs. NCBI nr
Match: XP_022948995.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita moschata])

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-54
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKES ENP+AKSTTPAVALEPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESVENPEAKSTTPAVALEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 119
           NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRS+
Sbjct: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSQ 118

[Close]

BLAST of Carg04237 vs. NCBI nr
Match: XP_022998926.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQT AAA+EKESEENP+AKSTTPAV LEPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQT-AAASEKESEENPEAKSTTPAVTLEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 119
           NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKK+RRTKTGKRRSR
Sbjct: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKARRTKTGKRRSR 117

[Close]

BLAST of Carg04237 vs. NCBI nr
Match: XP_023525193.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-51
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAA     ENP+AKSTTPAVALEPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAA----SENPEAKSTTPAVALEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 119
           NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR
Sbjct: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 114

[Close]

BLAST of Carg04237 vs. NCBI nr
Match: XP_022955885.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita moschata])

HSP 1 Score: 177.2 bits (448), Expect = 3.3e-41
Identity = 94/117 (80.34%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRS +SFRRQGSSGLVWDDRFLSGELKQTAAA+ E+ S           AV +EPI
Sbjct: 1   MEGLQRSEISFRRQGSSGLVWDDRFLSGELKQTAAASGEENS----------AAVTVEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRS 118
           NTT+ERSRSNGGRGYRTGKV PAIEPPSPKVS CGFCSAFGKPAKKSR TKTGKRRS
Sbjct: 61  NTTMERSRSNGGRGYRTGKVPPAIEPPSPKVSVCGFCSAFGKPAKKSRWTKTGKRRS 107

[Close]

BLAST of Carg04237 vs. NCBI nr
Match: XP_023527771.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 7.4e-41
Identity = 93/117 (79.49%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRS +SFRRQGSSGLVWDDRFLSGELKQTAAA+ E+ S           AV +EPI
Sbjct: 1   MEGLQRSEISFRRQGSSGLVWDDRFLSGELKQTAAASGEENS----------AAVTVEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRS 118
           NTT+ERSRSNGGRGYRTGKV PAIEPPSPKVS CGFCSAFGKPA+KSR TKTGKRRS
Sbjct: 61  NTTMERSRSNGGRGYRTGKVPPAIEPPSPKVSVCGFCSAFGKPARKSRWTKTGKRRS 107

[Close]

BLAST of Carg04237 vs. TAIR10
Match: AT1G80180.1 (unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 9.4e-22
Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKES-EENPDAKSTTPAV---- 60
           M GLQRS +SFRRQGSSG+VWDDR ++ EL Q AA   + E+ +++  AK  T  V    
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  -------ALEPINTT--IERSRSNGGRGYR----TGKVSPAIEPPSPKVSACGFCSAFGK 119
                   L+PI T   +ERSRSNGG   R    TG+VSPA++PPSP++SA G CSAFGK
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGK 120

[Close]

BLAST of Carg04237 vs. TAIR10
Match: AT1G15400.3 (unknown protein)

HSP 1 Score: 90.1 bits (222), Expect = 9.7e-19
Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAV----- 60
           MEGLQRS +SFRRQGSSG+V+DDR ++ EL ++     + ES+ +               
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEXXXXXXXXXXXXXX 60

Query: 61  -----ALEPINT------TIERSRSNGGRGYR----TGKVSPAIEPPSPKVSACGFCSAF 107
                 L PI T       IERSRSNGG   R    TG+VSPA++PPSP++S+CG CSAF
Sbjct: 61  XXXKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of Carg04237 vs. TAIR10
Match: AT5G20100.1 (unknown protein)

HSP 1 Score: 90.1 bits (222), Expect = 9.7e-19
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 4   LQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPINTT 63
           LQRS  SFRRQGSSGL+W+DRFLSGE++       E++ +   D +  + A        T
Sbjct: 3   LQRSTASFRRQGSSGLIWNDRFLSGEIRND-----ERQEDRCNDHRDGSMAAT----TAT 62

Query: 64  IERSRSNGGRGY--RTGKVSPAIEPPSPKVSA--CGFCSAFGKPAKKSRRTKTGKRRS 118
           ++RS S+GG G+  R G++SPA++PPSPK+SA  CGFCS F    K+  R   G+RRS
Sbjct: 63  VKRSASDGGCGHGGRLGELSPALDPPSPKISAVGCGFCSLFSSNGKRRSR---GRRRS 108

[Close]

BLAST of Carg04237 vs. Swiss-Prot
Match: sp|Q9SSC1|Y1801_ARATH (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-20
Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKES-EENPDAKSTTPAV---- 60
           M GLQRS +SFRRQGSSG+VWDDR ++ EL Q AA   + E+ +++  AK  T  V    
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  -------ALEPINTT--IERSRSNGGRGYR----TGKVSPAIEPPSPKVSACGFCSAFGK 119
                   L+PI T   +ERSRSNGG   R    TG+VSPA++PPSP++SA G CSAFGK
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGK 120

[Close]

BLAST of Carg04237 vs. Swiss-Prot
Match: sp|Q9XI29|Y1540_ARATH (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17
Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAV----- 60
           MEGLQRS +SFRRQGSSG+V+DDR ++ EL ++     + ES+ +               
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEXXXXXXXXXXXXXX 60

Query: 61  -----ALEPINT------TIERSRSNGGRGYR----TGKVSPAIEPPSPKVSACGFCSAF 107
                 L PI T       IERSRSNGG   R    TG+VSPA++PPSP++S+CG CSAF
Sbjct: 61  XXXKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of Carg04237 vs. TrEMBL
Match: tr|A0A1S4DZT3|A0A1S4DZT3_CUCME (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC107991268 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-30
Identity = 80/118 (67.80%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTA                          
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 119
                       RGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR
Sbjct: 61  XXXXXXXXXXXXRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 118

[Close]

BLAST of Carg04237 vs. TrEMBL
Match: tr|A0A2I4HD65|A0A2I4HD65_9ROSI (uncharacterized protein At1g15400-like OS=Juglans regia OX=51240 GN=LOC109016101 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 8.7e-30
Identity = 87/126 (69.05%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQ-----TAAAAAEKESEENPDAKSTTPAV 60
           M GLQRSAVSFRRQGSSGLVW+DRFLSGEL Q      A   A++E E  PD K    + 
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWEDRFLSGELNQKEDREQAGQEAQQELEIKPDIKDIKTSR 60

Query: 61  ALEPINTTIERSRSNGG-RGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKK-SRRTKTG 119
            +   N TIERSRSNGG RGYRTGKVSPAIEPPSPKVSACGFCSAFGK  KK +RRTK  
Sbjct: 61  TVGATN-TIERSRSNGGARGYRTGKVSPAIEPPSPKVSACGFCSAFGKTGKKGTRRTKPA 120

[Close]

BLAST of Carg04237 vs. TrEMBL
Match: tr|A0A2P4M7A1|A0A2P4M7A1_QUESU (Isoform 2 of uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22932 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 83/125 (66.40%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGEL-----KQTAAAAAEKESEENPDAKSTTPAV 60
           M GLQRSAVSFRRQGSSGLVWDDRF+S EL     K       ++E  E  D K   P++
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRFISEELNKVNQKDDQEQGQQQELVEKSDIKEVKPSI 60

Query: 61  ALEPINTTIERSRSNGG-RGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKK-SRRTKTG 119
            +   N TIERSRSNGG RGYRTGKVSPAIEPPSPKVSACGFC AFG P KK   RTK G
Sbjct: 61  NIGSTN-TIERSRSNGGTRGYRTGKVSPAIEPPSPKVSACGFCRAFGNPDKKGGHRTKRG 120

[Close]

BLAST of Carg04237 vs. TrEMBL
Match: tr|W9RC77|W9RC77_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_025807 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 85/127 (66.93%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAE--KESEENPDAKSTT---PAV 60
           M GLQRSA+SFRRQGSSGLVWDDRFLSGEL Q      +  + S +  D K  T      
Sbjct: 1   MAGLQRSAMSFRRQGSSGLVWDDRFLSGELNQVPQKEDQPPQGSGDQQDQKPETLLKEVK 60

Query: 61  ALEPINTTIERSRSN-GGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTK--- 119
           A  PIN T+ERS+SN GGRGYRTG+VSPAIEPPSPKVS CGFCSAF KP  K+RRTK   
Sbjct: 61  APRPIN-TVERSQSNGGGRGYRTGRVSPAIEPPSPKVSVCGFCSAFRKPTNKNRRTKTAG 120

[Close]

BLAST of Carg04237 vs. TrEMBL
Match: tr|A0A2P5BQC1|A0A2P5BQC1_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_219840 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-29
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60
           M GLQRSA SFRRQGSSGLVWDDRFLSGEL Q      E+E  ++ D +   P + ++  
Sbjct: 1   MAGLQRSATSFRRQGSSGLVWDDRFLSGELNQ-VNQKEEQEKPQDQDDQINKPEIMVKAP 60

Query: 61  NT--TIERSRSN-GGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKK--SRRTK--TG 119
            +  T++RSRSN GGRGYRTGKVSPAIEPPSPKVSACGFC+ FGKP K   S+RTK  TG
Sbjct: 61  RSINTVDRSRSNGGGRGYRTGKVSPAIEPPSPKVSACGFCTPFGKPPKNKTSQRTKAITG 120

The following BLAST results are available for this feature:

BLAST of Carg04237 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948995.1	2.0e-54	97.46	MAPK kinase substrate protein At1g80180-like [Cucurbita moschata]	[more]
XP_022998926.1	1.1e-52	95.76	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]
XP_023525193.1	2.1e-51	94.92	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955885.1	3.3e-41	80.34	MAPK kinase substrate protein At1g80180-like [Cucurbita moschata]	[more]
XP_023527771.1	7.4e-41	79.49	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg04237 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80180.1	9.4e-22	51.08	unknown protein	[more]
AT1G15400.3	9.7e-19	46.88	unknown protein	[more]
AT5G20100.1	9.7e-19	47.46	unknown protein	[more]

BLAST of Carg04237 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SSC1\|Y1801_ARATH	1.7e-20	51.08	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]
sp\|Q9XI29\|Y1540_ARATH	1.8e-17	46.88	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]

BLAST of Carg04237 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZT3\|A0A1S4DZT3_CUCME	3.0e-30	67.80	uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC107991268 P...	[more]
tr\|A0A2I4HD65\|A0A2I4HD65_9ROSI	8.7e-30	69.05	uncharacterized protein At1g15400-like OS=Juglans regia OX=51240 GN=LOC109016101...	[more]
tr\|A0A2P4M7A1\|A0A2P4M7A1_QUESU	1.1e-29	66.40	Isoform 2 of uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22932 PE...	[more]
tr\|W9RC77\|W9RC77_9ROSA	1.5e-29	66.93	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_025807 PE=4 SV=1	[more]
tr\|A0A2P5BQC1\|A0A2P5BQC1_PARAD	3.3e-29	65.60	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_219840 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031421	DUF4666

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04237-RA	Carg04237-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..107 e-value: 5.5E-37 score: 126.8
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	FAMILY NOT NAMED	coord: 1..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..70
None	No IPR available	PANTHER	PTHR33730:SF4	SUBFAMILY NOT NAMED	coord: 1..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04237	Cla012702	Watermelon (97103) v1	carwmB0192
Carg04237	Cla015380	Watermelon (97103) v1	carwmB0187
Carg04237	Csa4G004870	Cucumber (Chinese Long) v2	carcuB0226
Carg04237	MELO3C017897	Melon (DHL92) v3.5.1	carmeB0210
Carg04237	MELO3C023405	Melon (DHL92) v3.5.1	carmeB0198
Carg04237	ClCG06G010950	Watermelon (Charleston Gray)	carwcgB0198
Carg04237	ClCG09G002760	Watermelon (Charleston Gray)	carwcgB0190
Carg04237	ClCG07G012770	Watermelon (Charleston Gray)	carwcgB0199
Carg04237	CSPI07G20750	Wild cucumber (PI 183967)	carcpiB0236
Carg04237	Cucsa.096550	Cucumber (Gy14) v1	carcgyB0235
Carg04237	Cucsa.105300	Cucumber (Gy14) v1	carcgyB0238
Carg04237	CmaCh01G001340	Cucurbita maxima (Rimu)	carcmaB0278
Carg04237	CmaCh14G013420	Cucurbita maxima (Rimu)	carcmaB0276
Carg04237	CmoCh17G008190	Cucurbita moschata (Rifu)	carcmoB0284
Carg04237	CmoCh14G013700	Cucurbita moschata (Rifu)	carcmoB0283
Carg04237	CmoCh01G001420	Cucurbita moschata (Rifu)	carcmoB0285
Carg04237	Lsi02G027250	Bottle gourd (USVL1VR-Ls)	carlsiB176
Carg04237	Lsi06G009510	Bottle gourd (USVL1VR-Ls)	carlsiB181
Carg04237	Lsi07G004750	Bottle gourd (USVL1VR-Ls)	carlsiB182
Carg04237	Cp4.1LG02g14800	Cucurbita pepo (Zucchini)	carcpeB0285
Carg04237	Cp4.1LG12g07800	Cucurbita pepo (Zucchini)	carcpeB0280
Carg04237	Cp4.1LG03g13840	Cucurbita pepo (Zucchini)	carcpeB0287
Carg04237	CsGy4G001330	Cucumber (Gy14) v2	carcgybB0215
Carg04237	CsGy7G019000	Cucumber (Gy14) v2	carcgybB0218
Carg04237	MELO3C017897.2	Melon (DHL92) v3.6.1	carmedB0215
Carg04237	MELO3C023405.2	Melon (DHL92) v3.6.1	carmedB0203
Carg04237	CsaV3_7G032570	Cucumber (Chinese Long) v3	carcucB0233
Carg04237	CsaV3_4G001430	Cucumber (Chinese Long) v3	carcucB0230
Carg04237	Cla97C06G120160	Watermelon (97103) v2	carwmbB0204
Carg04237	Cla97C07G139570	Watermelon (97103) v2	carwmbB0205
Carg04237	Cla97C09G164910	Watermelon (97103) v2	carwmbB0209
Carg04237	Bhi01G002773	Wax gourd	carwgoB0246

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04237	Carg09903	Silver-seed gourd	carcarB147
Carg04237	Carg09574	Silver-seed gourd	carcarB240

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04237	Silver-seed gourd	carcarB139
Carg04237	Silver-seed gourd	carcarB239
Carg04237	Cucurbita maxima (Rimu)	carcmaB0273
Carg04237	Cucurbita maxima (Rimu)	carcmaB0277
Carg04237	Cucurbita maxima (Rimu)	carcmaB0284
Carg04237	Cucurbita moschata (Rifu)	carcmoB0280
Carg04237	Cucurbita pepo (Zucchini)	carcpeB0283
Carg04237	Cucurbita pepo (Zucchini)	carcpeB0291
Carg04237	Cucurbita pepo (Zucchini)	carcpeB0292
Carg04237	Wild cucumber (PI 183967)	carcpiB0225
Carg04237	Wild cucumber (PI 183967)	carcpiB0233
Carg04237	Cucumber (Chinese Long) v2	carcuB0218
Carg04237	Cucumber (Chinese Long) v2	carcuB0229
Carg04237	Melon (DHL92) v3.5.1	carmeB0209
Carg04237	Watermelon (Charleston Gray)	carwcgB0201
Carg04237	Watermelon (97103) v1	carwmB0189
Carg04237	Watermelon (97103) v2	carwmbB0207
Carg04237	Wax gourd	carwgoB0250
Carg04237	Wax gourd	carwgoB0253