Carg04078 (gene) Silver-seed gourd

Overview
NameCarg04078
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUPF0114 domain-containing protein
LocationCucurbita_argyrosperma_scaffold_011 : 1736728 .. 1738417 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCCACTCGATTGCTCCGGTCGGTTCGGCCTTCTTCCACCGTGGTGTCTTCTTCTTCTTCATCATCGCCATCCACGGCGGCGACTGTGAGGTGCTTGGGCAAAGCAGGGCTAAATTCAAAAAATGGCGAACGGCTAGTAACCTCCGGCGACGGTGAGAGAAGACAGATAGTCAACCTTAAGGCGGCGGCGGCTCCAGAGACTGTGGAGACAGAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGAACACGGCGGTGAAGACAAAGATTCGGAGGCGACAGATTCAGAAATTCATCGAAAAGGTTTGGATTAATCAAATTCCAATTAAATGCCTTACCGGAAATTACGATTTTCTGATCGGAATTTGCGGTTTTGTTAGATCATAATCGACTGCCGATTCTTTACATTATTCGCCGTCGCCGGATCTTTACTGGGTTCGATTCTATGTTTCCTTGAGGTGAACGCCGCTGAATTCTTCTAGTTTTCATTTAATTTCTCATTCAAACTTGGATCTTTTTTCGATGCTCTGTTTTGAATGCTCTGTTTTTAAATTTTCAGGGGAGCTTTATTGTTGCAGAGTCGTATCTGCAGTACTTTAATGGCGTTTCACGGAGGTCCGACGAGAGTCATGCGGTGGAGCTTCTAATTGAATCATTAGGTGAGTTTTGTTCAGAATTTCAAACGATATTTACTCTCTATGAATTTATTTGTTTACATAACTGTTCGACAGACATGTTCTTGGTCGGAACTGCTCTGGTTGTTTTTGGTGTCGGATTGTTCGCGATGTTCGTCGGATCGGAGAAGATGACGGAAAAGAACCGGCGGTGGGTCTCTGGGTCGAACTTGTTTGGTCTGTTCTACATGAAGGTACAAAAACAGAAGCGGTTAGATGAACACGATTCTCCACAATTGTATGATATTGTCAACGTTGAGCATAAGCTCTCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATTCAACACCTTCTCTCGAACAAAGTACGCCTCTCCTTAATCGAGCCTCGAGTCCTTTGGAGTCTTGTCATTTTTTACTATGCCTTCGAGGAGGGTTGACTCCTTTTCTTTTGGAGTACTTTGTTCGATATTTGAGGATTTACCAATCTATTGGCGCGACTAAGTTTCGAGCATGAGCATGATTCTGATGCCACGTTAGATGAACACAACTCTCTACAATGGTATGATATTGTCCACTTTGAGCAAAAGCTCTCGTGACTTTGTTCTGGACTTCCTCAAAATGCCTCAAACCAATGGAGAGAGTATTATCTCATTATGTATGATCATTTCCTAAATTAGCAACGTGAGACTTTTATCATCAAACAGAAACAAAAAGAAAAGCAGACATGGACCGATTTGGTCTGAATTGAAGCTTTGTTTATGATTCTAGCTTTGATTGTGTTGTTTTTTTCAGAACATTCCGACATGGGTGGAAATGGAATCGGTGTCGGAGGCAAAGTCGAAGATCGGACACGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAGAAGTTCAAGAGTATACCTTTGAGCTCCGCCACCGATCTCGCCTGTTTCGCCGCCGCCATTCTGATTTCCTCCGCCTCTATCTTCTTCCTCTCCAGACTCAACATAGGCGGCGGCGGGGGCGGCGGTTACAAGTAA

mRNA sequence

ATGGCAGCCACTCGATTGCTCCGGTCGGTTCGGCCTTCTTCCACCGTGGTGTCTTCTTCTTCTTCATCATCGCCATCCACGGCGGCGACTGTGAGGTGCTTGGGCAAAGCAGGGCTAAATTCAAAAAATGGCGAACGGCTAGTAACCTCCGGCGACGGTGAGAGAAGACAGATAGTCAACCTTAAGGCGGCGGCGGCTCCAGAGACTGTGGAGACAGAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGAACACGGCGGTGAAGACAAAGATTCGGAGGCGACAGATTCAGAAATTCATCGAAAAGATCATAATCGACTGCCGATTCTTTACATTATTCGCCGTCGCCGGATCTTTACTGGGTTCGATTCTATGTTTCCTTGAGGGGAGCTTTATTGTTGCAGAGTCGTATCTGCAGTACTTTAATGGCGTTTCACGGAGGTCCGACGAGAGTCATGCGGTGGAGCTTCTAATTGAATCATTAGACATGTTCTTGGTCGGAACTGCTCTGGTTGTTTTTGGTGTCGGATTGTTCGCGATGTTCAACATTCCGACATGGGTGGAAATGGAATCGGTGTCGGAGGCAAAGTCGAAGATCGGACACGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAGAAGTTCAAGAGTATACCTTTGAGCTCCGCCACCGATCTCGCCTGTTTCGCCGCCGCCATTCTGATTTCCTCCGCCTCTATCTTCTTCCTCTCCAGACTCAACATAGGCGGCGGCGGGGGCGGCGGTTACAAGTAA

Coding sequence (CDS)

ATGGCAGCCACTCGATTGCTCCGGTCGGTTCGGCCTTCTTCCACCGTGGTGTCTTCTTCTTCTTCATCATCGCCATCCACGGCGGCGACTGTGAGGTGCTTGGGCAAAGCAGGGCTAAATTCAAAAAATGGCGAACGGCTAGTAACCTCCGGCGACGGTGAGAGAAGACAGATAGTCAACCTTAAGGCGGCGGCGGCTCCAGAGACTGTGGAGACAGAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGAACACGGCGGTGAAGACAAAGATTCGGAGGCGACAGATTCAGAAATTCATCGAAAAGATCATAATCGACTGCCGATTCTTTACATTATTCGCCGTCGCCGGATCTTTACTGGGTTCGATTCTATGTTTCCTTGAGGGGAGCTTTATTGTTGCAGAGTCGTATCTGCAGTACTTTAATGGCGTTTCACGGAGGTCCGACGAGAGTCATGCGGTGGAGCTTCTAATTGAATCATTAGACATGTTCTTGGTCGGAACTGCTCTGGTTGTTTTTGGTGTCGGATTGTTCGCGATGTTCAACATTCCGACATGGGTGGAAATGGAATCGGTGTCGGAGGCAAAGTCGAAGATCGGACACGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAGAAGTTCAAGAGTATACCTTTGAGCTCCGCCACCGATCTCGCCTGTTTCGCCGCCGCCATTCTGATTTCCTCCGCCTCTATCTTCTTCCTCTCCAGACTCAACATAGGCGGCGGCGGGGGCGGCGGTTACAAGTAA

Protein sequence

MAATRLLRSVRPSSTVVSSSSSSSPSTAATVRCLGKAGLNSKNGERLVTSGDGERRQIVNLKAAAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFNIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGGGGYK
Homology
[Close]
BLAST of Carg04078 vs. NCBI nr
Match: XP_022951147.1 (uncharacterized protein LOC111454079 [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 6.9e-103
Identity = 231/273 (84.62%), Postives = 232/273 (84.98%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATRLLRSVRPS+   XXXXXXXXXXX TVRCLGK GLNSKNGERLVTSGDGERRQIVN
Sbjct: 1   MAATRLLRSVRPSATVVXXXXXXXXXXXATVRCLGKTGLNSKNGERLVTSGDGERRQIVN 60

Query: 61  LKA----AAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR 120
           LKA          VETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR
Sbjct: 61  LKAXXXXXXXXXXVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR 120

Query: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180
           FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT
Sbjct: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180

Query: 181 ALVVFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHA 240
           ALVVFGVGLFAMF                          NIPTWVEMESVSEAKSKIGHA
Sbjct: 181 ALVVFGVGLFAMFVGSEKMTEKNPRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGHA 240

Query: 241 VMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           VMMILQVGVLEKFKSIPLSSATDLACFAAAILI
Sbjct: 241 VMMILQVGVLEKFKSIPLSSATDLACFAAAILI 273

[Close]
BLAST of Carg04078 vs. NCBI nr
Match: XP_023002007.1 (uncharacterized protein LOC111496020 [Cucurbita maxima])

HSP 1 Score: 360.5 bits (924), Expect = 4.8e-96
Identity = 211/274 (77.01%), Postives = 215/274 (78.47%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATRLLRSVRPS+                VRCL K GLNSKNGERL+TSGDGERRQIVN
Sbjct: 1   MAATRLLRSVRPSA-TVVSSSSSSPSTAANVRCLVKTGLNSKNGERLITSGDGERRQIVN 60

Query: 61  LKA-----AAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDC 120
           LKA           VET+TRELDLGSLLANLLVQLKNTAVK KIRRRQIQKFIEKIII+C
Sbjct: 61  LKAXXXXXXXXXXXVETKTRELDLGSLLANLLVQLKNTAVKKKIRRRQIQKFIEKIIINC 120

Query: 121 RFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVG 180
           RFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFN VSRRSDESHAVELLIESLDMFLVG
Sbjct: 121 RFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNSVSRRSDESHAVELLIESLDMFLVG 180

Query: 181 TALVVFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGH 240
           TALVVFGVGLFAMF                          NIPTWVEMESVSEAKSKIGH
Sbjct: 181 TALVVFGVGLFAMFVGSEKMTEKNRRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGH 240

Query: 241 AVMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           AVMMILQVGVLEK KSIPLSSA DLACFAAAILI
Sbjct: 241 AVMMILQVGVLEKLKSIPLSSAADLACFAAAILI 273

[Close]
BLAST of Carg04078 vs. NCBI nr
Match: XP_023538418.1 (uncharacterized protein LOC111799204 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 7.6e-94
Identity = 215/273 (78.75%), Postives = 219/273 (80.22%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIV- 60
           MAATRL RSVRPS+   XXXXXXXXXXX TVRCLGK GLNSKNGERL+TSGDGER+  V 
Sbjct: 1   MAATRLFRSVRPSATVVXXXXXXXXXXXATVRCLGKTGLNSKNGERLITSGDGERKPKVX 60

Query: 61  ---NLKAAAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR 120
                           +TRELDLGSLLANLLVQLKNT VKTKIRRRQIQKFIEKIIIDCR
Sbjct: 61  XXXXXXXXXXXXXXXXKTRELDLGSLLANLLVQLKNTVVKTKIRRRQIQKFIEKIIIDCR 120

Query: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180
           FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT
Sbjct: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180

Query: 181 ALVVFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHA 240
           ALVVFGVGLFAMF                          NIPTWVEMESVSEAKSKIGHA
Sbjct: 181 ALVVFGVGLFAMFVGSEKMTEKNQRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGHA 240

Query: 241 VMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           VMMILQVGVLEKFKSIPLSSA DLACFA AILI
Sbjct: 241 VMMILQVGVLEKFKSIPLSSAADLACFAGAILI 273

[Close]
BLAST of Carg04078 vs. NCBI nr
Match: XP_011649594.1 (PREDICTED: uncharacterized protein LOC101218655 isoform X1 [Cucumis sativus] >KGN62563.1 hypothetical protein Csa_2G360800 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 8.4e-85
Identity = 192/272 (70.59%), Postives = 222/272 (81.62%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATR ++ VRP++XXXXXXXXXXXXXX  VR LGK GLN  NGERL+TSG  ERRQ+V 
Sbjct: 1   MAATRFVQRVRPAAXXXXXXXXXXXXXXTNVRVLGKTGLNLNNGERLITSGGDERRQLVT 60

Query: 61  LKAA---AAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCRF 120
           +KAA   AAP+TVET+T ELDLGSL+ANLL+QLKNT  KTKI++ +IQKFIEKIIIDCRF
Sbjct: 61  VKAAAATAAPKTVETKTGELDLGSLVANLLIQLKNTLGKTKIKKGEIQKFIEKIIIDCRF 120

Query: 121 FTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTA 180
           FTL AV+GSL+GSILC++EGSFIV ESYLQYF+G+S+R+D++H VELLIE+LDMFLVGTA
Sbjct: 121 FTLLAVSGSLMGSILCYIEGSFIVVESYLQYFHGLSQRTDQTHTVELLIEALDMFLVGTA 180

Query: 181 LVVFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHAV 240
           L+VFG+GLFAMF                           IPTWVEMES+S AKSKIGHAV
Sbjct: 181 LIVFGIGLFAMFVGSEKMKDKNQKWSSRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAV 240

Query: 241 MMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           MMILQVGVLEKFK+IPLSSA DLACFAAA+LI
Sbjct: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLI 272

[Close]
BLAST of Carg04078 vs. NCBI nr
Match: XP_008444667.1 (PREDICTED: uncharacterized protein LOC103487936 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 189/270 (70.00%), Postives = 220/270 (81.48%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATR ++ VRP+ XXXXXXXXXXXXXX  VR LGK GLN  NGERL+TSG GE RQ++ 
Sbjct: 1   MAATRFMQRVRPAXXXXXXXXXXXXXXXTNVRVLGKTGLNLNNGERLITSGGGEGRQLIA 60

Query: 61  LKAA-AAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCRFFT 120
           +KAA  AP+TVET+T ELDLGSL+++LLVQLK T  KTKI++R+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALV 180
           L AV+GSL+GSILC++EGSFIVAESYLQYF+ +S+R++++H VELLIE+LDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHAVMM 240
           VFG+GLFAMF                           IPTWVEMES+S AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNQKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           ILQVGVLEKFK+IPLSSA DLACFAAA+LI
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLI 270

[Close]
BLAST of Carg04078 vs. TAIR10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-25
Identity = 63/170 (37.06%), Postives = 100/170 (58.82%), Query Frame = 0 

Query: 100 RRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDES 159
           R   +++ IEK+I  CRF T     GSLLGS+LCF++G   V +S+LQY   V+R     
Sbjct: 93  RFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY--SVNR----G 152

Query: 160 HAVELLIESLDMFLVGTALVVFGVG-------------------------LFAMFNI--- 219
             + LL+E++D++L+GT ++VFG+G                         LF MF +   
Sbjct: 153 KVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKER 212

Query: 220 PTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAI 242
           P W+E++SVSE K+K+GH ++M+L +G+ +K K + ++S TDL C + +I
Sbjct: 213 PQWLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSI 256

[Close]
BLAST of Carg04078 vs. TAIR10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 0 

Query: 102 RQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHA 161
           R  +  +E+II D RF  L AV GSL GS+LCFL G   + E+Y  Y+   S+       
Sbjct: 77  RSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQM 136

Query: 162 VELLIESLDMFLVGTALVVFGVGL----------------------------FAMFNIPT 221
           V  L+E++D++L GT +++F +GL                            FAM   P 
Sbjct: 137 VLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPK 196

Query: 222 WVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           W+++ S+ E K+K+GH ++MIL V + E+ K + +++  DL  ++  I +
Sbjct: 197 WMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFL 246

[Close]
BLAST of Carg04078 vs. TrEMBL
Match: tr|A0A0A0LLC9|A0A0A0LLC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360800 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.6e-85
Identity = 192/272 (70.59%), Postives = 222/272 (81.62%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATR ++ VRP++XXXXXXXXXXXXXX  VR LGK GLN  NGERL+TSG  ERRQ+V 
Sbjct: 1   MAATRFVQRVRPAAXXXXXXXXXXXXXXTNVRVLGKTGLNLNNGERLITSGGDERRQLVT 60

Query: 61  LKAA---AAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCRF 120
           +KAA   AAP+TVET+T ELDLGSL+ANLL+QLKNT  KTKI++ +IQKFIEKIIIDCRF
Sbjct: 61  VKAAAATAAPKTVETKTGELDLGSLVANLLIQLKNTLGKTKIKKGEIQKFIEKIIIDCRF 120

Query: 121 FTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTA 180
           FTL AV+GSL+GSILC++EGSFIV ESYLQYF+G+S+R+D++H VELLIE+LDMFLVGTA
Sbjct: 121 FTLLAVSGSLMGSILCYIEGSFIVVESYLQYFHGLSQRTDQTHTVELLIEALDMFLVGTA 180

Query: 181 LVVFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHAV 240
           L+VFG+GLFAMF                           IPTWVEMES+S AKSKIGHAV
Sbjct: 181 LIVFGIGLFAMFVGSEKMKDKNQKWSSRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAV 240

Query: 241 MMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           MMILQVGVLEKFK+IPLSSA DLACFAAA+LI
Sbjct: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLI 272

[Close]
BLAST of Carg04078 vs. TrEMBL
Match: tr|A0A1S3BAX1|A0A1S3BAX1_CUCME (uncharacterized protein LOC103487936 OS=Cucumis melo OX=3656 GN=LOC103487936 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 6.8e-83
Identity = 189/270 (70.00%), Postives = 220/270 (81.48%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQIVN 60
           MAATR ++ VRP+ XXXXXXXXXXXXXX  VR LGK GLN  NGERL+TSG GE RQ++ 
Sbjct: 1   MAATRFMQRVRPAXXXXXXXXXXXXXXXTNVRVLGKTGLNLNNGERLITSGGGEGRQLIA 60

Query: 61  LKAA-AAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCRFFT 120
           +KAA  AP+TVET+T ELDLGSL+++LLVQLK T  KTKI++R+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALV 180
           L AV+GSL+GSILC++EGSFIVAESYLQYF+ +S+R++++H VELLIE+LDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMF--------------------------NIPTWVEMESVSEAKSKIGHAVMM 240
           VFG+GLFAMF                           IPTWVEMES+S AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNQKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           ILQVGVLEKFK+IPLSSA DLACFAAA+LI
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLI 270

[Close]
BLAST of Carg04078 vs. TrEMBL
Match: tr|A0A2I4GIL4|A0A2I4GIL4_9ROSI (uncharacterized protein LOC109008186 OS=Juglans regia OX=51240 GN=LOC109008186 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 157/282 (55.67%), Postives = 195/282 (69.15%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSS--XXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQI 60
           MAATRLLRS RP +   XXXXXXXXXXXX   VRCL KAG    NGE+ + SG GER+ +
Sbjct: 1   MAATRLLRSSRPLNLGLXXXXXXXXXXXXGKAVRCLSKAGF---NGEK-IFSGYGERKSV 60

Query: 61  -VNLKAA--AAPETVETETRELDLGSL------LANL---LVQLKNTAVKTKIRRRQIQK 120
            V LKAA  AAPE + T    +  G L      +AN+   +V L  TAVK K R+  IQ 
Sbjct: 61  AVALKAASVAAPERIVTSAPGMSRGILDFASLIVANIRHAMVILVRTAVKQKRRKMYIQM 120

Query: 121 FIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLI 180
           F+EK I+DCRFFTLFAVAGSLLGS+LCFLEG F + ESYLQYF+ +S ++D+ H ++LLI
Sbjct: 121 FLEKAIVDCRFFTLFAVAGSLLGSVLCFLEGCFTIVESYLQYFHSLSHKADQEHVMQLLI 180

Query: 181 ESLDMFLVGTALVVFGVGLFAMF-------------------------NIPTWVEMESVS 240
           E++DMFL+GTA+++FG+GL+ +F                          +P WVEM+SVS
Sbjct: 181 EAIDMFLIGTAMLMFGMGLYVIFVGKKTMTKEGPRLSGSNLFGLFYMKTLPAWVEMQSVS 240

Query: 241 EAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           +AKSKIGHAVMMILQVGVLEKFK++PL +  DLACFA A+LI
Sbjct: 241 QAKSKIGHAVMMILQVGVLEKFKNVPLVTGVDLACFAGAVLI 278

[Close]
BLAST of Carg04078 vs. TrEMBL
Match: tr|A0A2I4GIM8|A0A2I4GIM8_9ROSI (uncharacterized protein LOC109008185 OS=Juglans regia OX=51240 GN=LOC109008185 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.6e-58
Identity = 156/282 (55.32%), Postives = 195/282 (69.15%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSS--XXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTSGDGERRQI 60
           MAATRLLRS RP +   XXXXXXXXXXXX   VRCL KAG    NGE+ + SG GE++ +
Sbjct: 1   MAATRLLRSSRPLNLGLXXXXXXXXXXXXGKAVRCLSKAGF---NGEK-IFSGYGEKKSV 60

Query: 61  -VNLKAA--AAPETVETETRELDLGSL------LANL---LVQLKNTAVKTKIRRRQIQK 120
            V LKAA  AAPE + T    +  G L      +AN+   +V L  TAVK K R+  IQ 
Sbjct: 61  AVALKAASVAAPERIVTSAPGMSRGILDFSSLIVANIRHAMVILVRTAVKQKRRKMYIQM 120

Query: 121 FIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLI 180
           F+EK I+DCRFFTLFAVAGSLLGS+LCFLEG F + ESYLQYF+ +S ++D+ H ++LLI
Sbjct: 121 FLEKAIVDCRFFTLFAVAGSLLGSVLCFLEGCFTIVESYLQYFHSLSHKADQEHVMQLLI 180

Query: 181 ESLDMFLVGTALVVFGVGLFAMF-------------------------NIPTWVEMESVS 240
           E++DMFL+GTA+++FG+GL+ +F                          +P WVEM+SVS
Sbjct: 181 EAIDMFLIGTAMLMFGMGLYVIFVGKKTMTKEGPRLSGSNLFGLFYMKTLPAWVEMQSVS 240

Query: 241 EAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILI 244
           +AKSKIGHAVMMILQVGVLEKFK++PL +  DLACFA A+LI
Sbjct: 241 QAKSKIGHAVMMILQVGVLEKFKNVPLVTGVDLACFAGAVLI 278

[Close]
BLAST of Carg04078 vs. TrEMBL
Match: tr|A0A2K1XQ44|A0A2K1XQ44_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G039000v3 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.4e-56
Identity = 143/281 (50.89%), Postives = 179/281 (63.70%), Query Frame = 0 

Query: 1   MAATRLLRSVRPSSXXXXXXXXXXXXXXXTVRCLGKAGLNSKNGERLVTS--GDGERRQI 60
           M+ TRLLRS +P                 TV+C GKA     NGE++V+   GD +R+  
Sbjct: 2   MSTTRLLRSSKP--LRHVGPPSATSSPFSTVKCAGKA--TGLNGEKMVSGDHGDHKRKST 61

Query: 61  VNLKAAAAPE-----TVE---TETRELDLGSLLAN----LLVQLKNTAVKTKIRRRQIQK 120
           V +KA+ A       TVE    E   +DL SLLA     LL  L+  A K+K  + Q+QK
Sbjct: 62  VAVKASVATSQGSLLTVEPPRVERGLIDLASLLATVSNALLKVLRPPASKSKQWKFQVQK 121

Query: 121 FIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLI 180
            IEK IIDCRFFTLFAVAGSLLGS LCF+EG F++ ESY QYFN +SR SD+ H V LLI
Sbjct: 122 LIEKAIIDCRFFTLFAVAGSLLGSTLCFVEGCFLILESYFQYFNTLSRVSDQGHLVHLLI 181

Query: 181 ESLDMFLVGTALVVFGVGLFAMF-------------------------NIPTWVEMESVS 240
           E++D FLVGTA+++FGVGL+ MF                         ++PTWVEM SVS
Sbjct: 182 EAIDSFLVGTAMLIFGVGLYVMFVGSKNPKDEALSLPDSNLFGLFSLKSLPTWVEMRSVS 241

Query: 241 EAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAIL 243
           +AKSKIGHA+MMILQVG+LEKFK+IPL+++ DLACFA A+L
Sbjct: 242 QAKSKIGHAIMMILQVGMLEKFKNIPLATSLDLACFAGAVL 278

The following BLAST results are available for this feature:
BLAST of Carg04078 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951147.16.9e-10384.62uncharacterized protein LOC111454079 [Cucurbita moschata][more]
XP_023002007.14.8e-9677.01uncharacterized protein LOC111496020 [Cucurbita maxima][more]
XP_023538418.17.6e-9478.75uncharacterized protein LOC111799204 [Cucurbita pepo subsp. pepo][more]
XP_011649594.18.4e-8570.59PREDICTED: uncharacterized protein LOC101218655 isoform X1 [Cucumis sativus] >KG... [more]
XP_008444667.11.0e-8270.00PREDICTED: uncharacterized protein LOC103487936 [Cucumis melo][more]
BLAST of Carg04078 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G19390.13.1e-2537.06Uncharacterised protein family (UPF0114)[more]
AT5G13720.11.0e-2031.76Uncharacterised protein family (UPF0114)[more]
BLAST of Carg04078 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg04078 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LLC9|A0A0A0LLC9_CUCSA5.6e-8570.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360800 PE=4 SV=1[more]
tr|A0A1S3BAX1|A0A1S3BAX1_CUCME6.8e-8370.00uncharacterized protein LOC103487936 OS=Cucumis melo OX=3656 GN=LOC103487936 PE=... [more]
tr|A0A2I4GIL4|A0A2I4GIL4_9ROSI1.2e-5855.67uncharacterized protein LOC109008186 OS=Juglans regia OX=51240 GN=LOC109008186 P... [more]
tr|A0A2I4GIM8|A0A2I4GIM8_9ROSI2.6e-5855.32uncharacterized protein LOC109008185 OS=Juglans regia OX=51240 GN=LOC109008185 P... [more]
tr|A0A2K1XQ44|A0A2K1XQ44_POPTR2.4e-5650.89Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G039000v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005134UPF0114
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04078-RACarg04078-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005134Uncharacterised protein family UPF0114PFAMPF03350UPF0114coord: 112..223
e-value: 1.5E-25
score: 89.5
NoneNo IPR availablePANTHERPTHR31721:SF3SUBFAMILY NOT NAMEDcoord: 2..189
NoneNo IPR availablePANTHERPTHR31721:SF3SUBFAMILY NOT NAMEDcoord: 191..256
NoneNo IPR availablePANTHERPTHR31721FAMILY NOT NAMEDcoord: 2..189
coord: 191..256