BLAST of Carg04013 vs. NCBI nr
Match:
XP_022951057.1 (pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita moschata])
HSP 1 Score: 1421.4 bits (3678), Expect = 0.0e+00
Identity = 792/797 (99.37%), Postives = 794/797 (99.62%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSNLV+ARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DALTLFRKMR +GVELDEFTYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG
Sbjct: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG
Sbjct: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKN IDSMPCKPGAPIWEAL
Sbjct: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNVIDSMPCKPGAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK
Sbjct: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG
Sbjct: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSCGNYW
Sbjct: 781 KRFHHFKNGECSCGNYW 797
BLAST of Carg04013 vs. NCBI nr
Match:
XP_023002238.1 (pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita maxima])
HSP 1 Score: 1403.7 bits (3632), Expect = 0.0e+00
Identity = 784/797 (98.37%), Postives = 790/797 (99.12%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRN IDVRVLANRYAAQLQLCCPQN SSFSLARTVHAHMIVSGFK RGHLVNRLLDIYWK
Sbjct: 1 MRNVIDVRVLANRYAAQLQLCCPQNSSSFSLARTVHAHMIVSGFKLRGHLVNRLLDIYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSNLV+ARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFN TPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNRTPLNMRDTIFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DALTLFRKMR +GVELDEFTYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGAR+IFYEMPVKDIV
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARNIFYEMPVKDIV 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG
Sbjct: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEPCDYAFAGAITACSVLGSLENGRQLHAQL+HLGHDSSLSIGNAMISMYARCGVVEAAR
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLVHLGHDSSLSIGNAMISMYARCGVVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG
Sbjct: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LV+EGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKN IDSMPCKPGAPIWEAL
Sbjct: 541 LVKEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNVIDSMPCKPGAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK
Sbjct: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMS+VVRREIVVRDG
Sbjct: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSQVVRREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSCGNYW
Sbjct: 781 KRFHHFKNGECSCGNYW 797
BLAST of Carg04013 vs. NCBI nr
Match:
XP_023537093.1 (pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1384.8 bits (3583), Expect = 0.0e+00
Identity = 721/797 (90.46%), Postives = 733/797 (91.97%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK
Sbjct: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSNLV+ARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG
Sbjct: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DALTLFRKMR +GVELDEFTYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTLFRKMRFLGVELDEFTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYG+++ A+ F +MP K ++
Sbjct: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGRMEEAKSFFAQMPEKSLL 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
+W RLDG
Sbjct: 361 TW-------------------------------TVMISGLAQNGFGEEGLNLFNRMRLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR
Sbjct: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG
Sbjct: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKN IDSMPCKPGAPIWEAL
Sbjct: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNVIDSMPCKPGAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCRIHGNMDLGVEAAEKLFELMPQ+DGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK
Sbjct: 601 LAGCRIHGNMDLGVEAAEKLFELMPQNDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLSV+NYLEELSLEMKKAGYVPDTKYVLHDME E
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVHNYLEELSLEMKKAGYVPDTKYVLHDMEYE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG
Sbjct: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 766
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSCGNYW
Sbjct: 781 KRFHHFKNGECSCGNYW 766
BLAST of Carg04013 vs. NCBI nr
Match:
XP_022144208.1 (pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144209.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144210.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144211.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144212.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144213.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144365.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144367.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144368.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144369.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144370.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144371.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144372.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia] >XP_022144373.1 pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia])
HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 731/797 (91.72%), Postives = 774/797 (97.11%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRN++ +RV+ANRYAAQLQLCCPQNPSSFSLARTVHAHMI SGFKPRGHLVNRLLD+YWK
Sbjct: 1 MRNSLGIRVVANRYAAQLQLCCPQNPSSFSLARTVHAHMIASGFKPRGHLVNRLLDVYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSNLV+ARQLFDEIPNPDAVARTTLITAYS +GNL++AR IFNGTPL MRDTIFYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPDAVARTTLITAYSAVGNLSLARAIFNGTPLVMRDTIFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SHN DGHSA+ LFHAMRR NF+PDDFTFTSVLSALALIVDNEQQC Q+HGAVVKSGTG
Sbjct: 121 GYSHNDDGHSALELFHAMRRGNFQPDDFTFTSVLSALALIVDNEQQCSQIHGAVVKSGTG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
LVSSVLNALLSVYVKCASSPLV SSSLMASARKLFDEMP+RDELTWTT+ITGYVRNDDL
Sbjct: 181 LVSSVLNALLSVYVKCASSPLVLSSSLMASARKLFDEMPERDELTWTTMITGYVRNDDLN 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ALTLFRKMRL+GV+ DEFTYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLFQEALTLFRKMRLLGVQHDEFTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
NGGFFQLGK++HAYILKNELNPNHDF+LSVSN+LITLYWK+GKVDGAR IFYEMP+KDIV
Sbjct: 301 NGGFFQLGKQVHAYILKNELNPNHDFILSVSNALITLYWKFGKVDGARKIFYEMPIKDIV 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG
Sbjct: 361 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEPCDYAFAGAITACSVLG+LENGRQLHAQLIHLGHDSSLS+GNAMISMYARCGVVEAA+
Sbjct: 421 YEPCDYAFAGAITACSVLGALENGRQLHAQLIHLGHDSSLSVGNAMISMYARCGVVEAAK 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
S+FLTMPFVDSVSWNAMIAALGQHGHGVKA EL+E+ML+EGILPDRITFLTV+SACSH+G
Sbjct: 481 SLFLTMPFVDSVSWNAMIAALGQHGHGVKAIELFERMLEEGILPDRITFLTVISACSHAG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LV+EG +YFNSM E YGITPGEDHYARMIDLFCRAGKFSDAKN IDSMPCKPGAP+WEAL
Sbjct: 541 LVDEGHKYFNSMSETYGITPGEDHYARMIDLFCRAGKFSDAKNVIDSMPCKPGAPMWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCRIHGNMDLGVEAAE+LFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK
Sbjct: 601 LAGCRIHGNMDLGVEAAERLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLE+LSLEMKK GY+PDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEQLSLEMKKLGYIPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYAL+THSE+LAVGFGLMKLP GATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG
Sbjct: 721 HKEYALSTHSEKLAVGFGLMKLPKGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSCGNYW
Sbjct: 781 KRFHHFKNGECSCGNYW 797
BLAST of Carg04013 vs. NCBI nr
Match:
XP_004152758.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like [Cucumis sativus] >KGN62675.1 hypothetical protein Csa_2G368270 [Cucumis sativus])
HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 683/797 (85.70%), Postives = 736/797 (92.35%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRN +DVRVLANRY AQL LCCPQN SS+SLARTVH H+I SGFK RGH+VNRL+DIYWK
Sbjct: 1 MRNVLDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+ V+AR+LFDEIP PD +ARTTLITAYS LGNL MAREIFN TPL+MRDT+FYNAMIT
Sbjct: 61 SSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SH DGHSAI LF AMR +NF+PDDFTF SVLSA LI +E+QCGQMHG VVK G
Sbjct: 121 GYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIE 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
+ +VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+R+E WTTLITGYVRN D X
Sbjct: 181 IFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDXX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALTLFRKMRL+GV++DE TYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTLFRKMRLLGVQVDESTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
+GGFF LGK++HAYILKNELNP+ DFLLSV N+LITLYWKYGKVDGAR IFYEMPVKDI+
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDG
Sbjct: 361 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEP DYAFAGAITACSVLG+LENGRQLHAQ++HLGHDS+LS+GNAMI+MYARCG+VEAAR
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
++FLTMPFVD VSWN+MIAALGQHGHGVKA ELYEQMLKEGILPDR TFLTVLSACSH+G
Sbjct: 481 TMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LVEEG RYFNSM ENYGI PGEDHYARMIDLFCRAGKFSDAKN IDSMP + APIWEAL
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCR HGNMDLG+EAAEKLF+L+PQHDGTYVLLSNMYA++GRWNDVAR RKLMRDRGVK
Sbjct: 601 LAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLS+YNYLE+L+LEMKK GY+PDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYAL+THSE+LAV FGLMKLP GATVRVFKNLRICGDCHNA KFMSKVV REIVVRDG
Sbjct: 721 HKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSC NYW
Sbjct: 781 KRFHHFKNGECSCRNYW 797
BLAST of Carg04013 vs. TAIR10
Match:
AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 913.3 bits (2359), Expect = 1.0e-265
Identity = 510/794 (64.23%), Postives = 629/794 (79.22%), Query Frame = 0
Query: 7 VRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWKSSNLVH 66
VR +ANRYAA L+LC P +S LAR VH ++I GF+PR H++NRL+D+Y KSS L +
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 67 ARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNV 126
ARQLFDEI PD +ARTT+++ Y G++ +AR +F P+ MRDT+ YNAMITGFSHN
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 127 DGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTGLVSSVL 186
DG+SAI LF M+ F+PD+FTF SVL+ LAL+ D+E+QC Q H A +KSG G ++SV
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS 187
Query: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRND--DLXXXXX 246
NAL+SVY KCASSP SL+ SARK+FDE+ ++DE +WTT++TGYV+N DL
Sbjct: 188 NALVSVYSKCASSP-----SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDL-GEEL 247
Query: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGF 306
XXXXXXXXXX++AL + R+M G+ELDEFTY SVI ACA G
Sbjct: 248 LEGMDDNMKLVAYNAMXXXXXXXXXXQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 307
Query: 307 FQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXX 366
QLGK++HAY+L+ E DF NSL++LY+K GK D AR IF +MP KD+VSWXX
Sbjct: 308 LQLGKQVHAYVLRRE-----DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWXX 367
Query: 367 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPC 426
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +EPC
Sbjct: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEPC 427
Query: 427 DYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFL 486
DYAF+GAI +C+VLG+ NG+Q HAQL+ +G DSSLS GNA+I+MYA+CGVVE AR VF
Sbjct: 428 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 487
Query: 487 TMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEE 546
TMP +DSVSWNA+IAALGQHGHG +A ++YE+MLK+GI PDRIT LTVL+ACSH+GLV++
Sbjct: 488 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 547
Query: 547 GRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGC 606
GR+YF+SM Y I PG DHYAR+IDL CR+GKFSDA++ I+S+P KP A IWEALL+GC
Sbjct: 548 GRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGC 607
Query: 607 RIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPA 666
R+HGNM+LG+ AA+KLF L+P+HDGTY+LLSNM+A G+W +VARVRKLMRDRGVKKE A
Sbjct: 608 RVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVA 667
Query: 667 CSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE-HKE 726
CSW E+E +VH FLVDDT HPE +VY YL++L EM++ GYVPDT +VLHD+ES+ HKE
Sbjct: 668 CSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKE 727
Query: 727 YALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRF 786
L THSE++AV FGLMKLPPG T+R+FKNLR CGDCHN F+F+S VV+R+I++RD KRF
Sbjct: 728 DMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRF 787
Query: 787 HHFKNGECSCGNYW 798
HHF+NGECSCGN+W
Sbjct: 788 HHFRNGECSCGNFW 790
BLAST of Carg04013 vs. TAIR10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 458.0 bits (1177), Expect = 1.2e-128
Identity = 276/812 (33.99%), Postives = 393/812 (48.40%), Query Frame = 0
Query: 60 KSSNLVHARQLFD-EIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAM 119
+S+ +HAR + +I N A+ L+ Y LGN+ +AR F+ + RD +N M
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAK--LVNLYCYLGNVALARHTFD--HIQNRDVYAWNLM 127
Query: 120 ITGFSHNVDGHSAIGLFHA-MRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKS 179
I+G+ + I F M S PD TF SVL A ++D ++H +K
Sbjct: 128 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKF 187
Query: 180 GTGLVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRND 239
G + VYV + L S + +AR LFDEMP RD +W +I+GY ++
Sbjct: 188 G---------FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 247
Query: 240 DLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVIS 299
+ ++ALTL +R +D T S++S
Sbjct: 248 N-------------------------------AKEALTLSNGLR----AMDSVTVVSLLS 307
Query: 300 ACANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVK 359
AC G F G +H+Y +K+ L L VSN LI LY ++G++ + +F M V+
Sbjct: 308 ACTEAGDFNRGVTIHSYSIKHGLESE----LFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 367
Query: 360 DIVSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 419
D++SW +
Sbjct: 368 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 427
Query: 420 --------------------------------------------------LDGYEPCDYA 479
+ GY +A
Sbjct: 428 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 487
Query: 480 ----------------------FAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNA 539
+ + ACS G+L G +LH +L+ G + + +
Sbjct: 488 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 547
Query: 540 MISMYARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPD 599
+ MY +CG +E A S+F +P V+SV WN +IA G HGHG KA L+++ML EG+ PD
Sbjct: 548 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 607
Query: 600 RITFLTVLSACSHSGLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFI 659
ITF+T+LSACSHSGLV+EG+ F M +YGITP HY M+D++ RAG+ A FI
Sbjct: 608 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 667
Query: 660 DSMPCKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWN 719
SM +P A IW ALL+ CR+HGN+DLG A+E LFE+ P+H G +VLLSNMYA+ G+W
Sbjct: 668 KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 727
Query: 720 DVARVRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAG 779
V +R + +G++K P S EV+NKV VF + HP +Y L L ++K G
Sbjct: 728 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 787
Query: 780 YVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFK 798
YVPD ++VL D+E + KE+ L +HSERLA+ F L+ P T+R+FKNLR+CGDCH+ K
Sbjct: 788 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 823
BLAST of Carg04013 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-124
Identity = 254/723 (35.13%), Postives = 382/723 (52.84%), Query Frame = 0
Query: 78 DAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNVDGHSAIGLFHA 137
D A T L Y+ +N AR++F+ P RD + +N ++ G+S N A+ + +
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKS 228
Query: 138 MRRSNFRPDDFTFTSVL---SALALIVDNEQQCGQMHGAVVKSGTGLVSSVLNALLSVYV 197
M N +P T SVL SAL LI + ++HG ++SG + ++ AL+ +Y
Sbjct: 229 MCEENLKPSFITIVSVLPAVSALRLISVGK----EIHGYAMRSGFDSLVNISTALVDMYA 288
Query: 198 KCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLXXXXXXXXXXXXXXX 257
KC S + +AR+LFD M +R+ ++W ++I YV+N++
Sbjct: 289 KCGS---------LETARQLFDGMLERNVVSWNSMIDAYVQNEN---------------- 348
Query: 258 XXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGFFQLGKELHAY 317
++A+ +F+KM GV+ + + + ACA+ G + G+ +H
Sbjct: 349 ---------------PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 408
Query: 318 ILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXXXXXXXXXXXX 377
++ L+ N +SV NSLI++Y K +VD A +F ++ + +VSW
Sbjct: 409 SVELGLDRN----VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW------------ 468
Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPCDYAFAGAITA 437
R +P + + ITA
Sbjct: 469 -------------------NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 528
Query: 438 CSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFLTMPFVDSVSW 497
+ L + + +H ++ D ++ + A++ MYA+CG + AR +F M +W
Sbjct: 529 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 588
Query: 498 NAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEEGRRYFNSMFE 557
NAMI G HG G A EL+E+M K I P+ +TFL+V+SACSHSGLVE G + F M E
Sbjct: 589 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 648
Query: 558 NYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGCRIHGNMDLGV 617
NY I DHY M+DL RAG+ ++A +FI MP KP ++ A+L C+IH N++
Sbjct: 649 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 708
Query: 618 EAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPACSWTEVENKV 677
+AAE+LFEL P G +VLL+N+Y W V +VR M +G++K P CS E++N+V
Sbjct: 709 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 768
Query: 678 HVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESEHKEYALATHSERLA 737
H F T HP+ +Y +LE+L +K+AGYVPDT VL +E++ KE L+THSE+LA
Sbjct: 769 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLA 809
Query: 738 VGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRFHHFKNGECSCG 797
+ FGL+ G T+ V KNLR+C DCHNA K++S V REIVVRD +RFHHFKNG CSCG
Sbjct: 829 ISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCG 809
BLAST of Carg04013 vs. TAIR10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-124
Identity = 246/692 (35.55%), Postives = 363/692 (52.46%), Query Frame = 0
Query: 111 DTIFYNAMITGFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQM 170
+ + + MIT AI F M S F D FT +SV SA A + +N Q+
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGKQL 292
Query: 171 HGAVVKSGTGLVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLI 230
H ++S GLV V +L+ +Y KC S+ + RK+FD M ++WT LI
Sbjct: 293 HSWAIRS--GLVDDVECSLVDMYAKC------SADGSVDDCRKVFDRMEDHSVMSWTALI 352
Query: 231 TGYVRNDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIG-VELDE 290
TGY++N +L +A+ LF +M G VE +
Sbjct: 353 TGYMKNCNL------------------------------ATEAINLFSEMITQGHVEPNH 412
Query: 291 FTYTSVISACANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARH 350
FT++S AC N ++GK++ K L N SV+NS+I+++ K +++ A+
Sbjct: 413 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS----SVANSVISMFVKSDRMEDAQR 472
Query: 351 IFYEMPVKDIVSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
F + K++VS+
Sbjct: 473 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA--------------- 532
Query: 411 XXXXXXXRLDGYEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISM 470
+ FA ++ + +GS+ G Q+H+Q++ LG + + NA+ISM
Sbjct: 533 ----------------FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 592
Query: 471 YARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITF 530
Y++CG ++ A VF M + +SW +MI +HG ++ E + QM++EG+ P+ +T+
Sbjct: 593 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 652
Query: 531 LTVLSACSHSGLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMP 590
+ +LSACSH GLV EG R+FNSM+E++ I P +HYA M+DL CRAG +DA FI++MP
Sbjct: 653 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 712
Query: 591 CKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVAR 650
+ +W L CR+H N +LG AA K+ EL P Y+ LSN+YA G+W +
Sbjct: 713 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 772
Query: 651 VRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPD 710
+R+ M++R + KE CSW EV +K+H F V DT HP +Y+ L+ L E+K+ GYVPD
Sbjct: 773 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 832
Query: 711 TKYVLHDMESEH----KEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFK 770
T VLH +E E+ KE L HSE++AV FGL+ VRVFKNLR+CGDCHNA K
Sbjct: 833 TDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMK 850
Query: 771 FMSKVVRREIVVRDGKRFHHFKNGECSCGNYW 798
++S V REIV+RD RFHHFK+G+CSC +YW
Sbjct: 893 YISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
BLAST of Carg04013 vs. TAIR10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 440.3 bits (1131), Expect = 2.6e-123
Identity = 247/714 (34.59%), Postives = 361/714 (50.56%), Query Frame = 0
Query: 84 TLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNVDGHSAIGLFHAMRRSNF 143
+LI Y L AR +F+ ++ RD I +N++I G + N A+ LF + R
Sbjct: 355 SLINMYCKLRKFGFARTVFDN--MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 414
Query: 144 RPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTGLVSSVLNALLSVYVKCASSPLVS 203
+PD +T TSVL A + + + Q+H +K S V AL+ Y S
Sbjct: 415 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY---------S 474
Query: 204 SSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLXXXXXXXXXXXXXXXXXXXXXXXX 263
+ M A LF E D + W ++ GY ++ D
Sbjct: 475 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHD------------------------- 534
Query: 264 XXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGFFQLGKELHAYILKNELNPN 323
L LF M G D+FT +V C GK++HAY +K+
Sbjct: 535 ------GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS----G 594
Query: 324 HDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXXXXXXXXXXXXXXXXXXXXX 383
+D L VS+ ++ +Y K G + A+ F +PV D V+W
Sbjct: 595 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW--------------------- 654
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPCDYAFAGAITACSVLGSLEN 443
RL G P ++ A A S L +LE
Sbjct: 655 ----------TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 714
Query: 444 GRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQ 503
GRQ+HA + L + +G +++ MYA+CG ++ A +F + ++ +WNAM+ L Q
Sbjct: 715 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 774
Query: 504 HGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEEGRRYFNSMFENYGITPGED 563
HG G + +L++QM GI PD++TF+ VLSACSHSGLV E ++ SM +YGI P +
Sbjct: 775 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 834
Query: 564 HYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFEL 623
HY+ + D RAG A+N I+SM + A ++ LLA CR+ G+ + G A KL EL
Sbjct: 835 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 894
Query: 624 MPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTV 683
P YVLLSNMYA +W+++ R +M+ VKK+P SW EV+NK+H+F+VDD
Sbjct: 895 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRS 954
Query: 684 HPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLP 743
+ + +Y ++++ ++K+ GYVP+T + L D+E E KE AL HSE+LAV FGL+ P
Sbjct: 955 NRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTP 990
Query: 744 PGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRFHHFKNGECSCGNYW 798
P +RV KNLR+CGDCHNA K+++KV REIV+RD RFH FK+G CSCG+YW
Sbjct: 1015 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
HSP 2 Score: 63.5 bits (153), Expect = 6.6e-10
Identity = 81/359 (22.56%), Postives = 137/359 (38.16%), Query Frame = 0
Query: 27 SSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWKSSNLVHARQLFDEIPNPDAVARTTLI 86
S L + HA ++ P L+N L+ +Y K +L +AR++FD++P+ D V+ +++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 87 TAYSN-----LGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNVDGHS----AIGLFHA 146
AY+ + N+ A +F + +D ++ + M + HS A FH
Sbjct: 113 AAYAQSSECVVENIQQAFLLFR---ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 172
Query: 147 MR-RSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTGLVSS-------VLNAL 206
+ D+F V AL I + VK G L + N +
Sbjct: 173 YACKIGLDGDEF----VAGALVNI--------YLKFGKVKEGKVLFEEMPYRDVVLWNLM 232
Query: 207 LSVYVKCA-SSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDD-----LXXXX 266
L Y++ + SS S+ +E+ T + + DD +
Sbjct: 233 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEI--------TLRLLARISGDDSDAGQVKSFA 292
Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGG 326
L F M VE D+ T+ +++
Sbjct: 293 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 352
Query: 327 FFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSW 363
LG+++H LK L D +L+VSNSLI +Y K K AR +F M +D++SW
Sbjct: 353 SLALGQQVHCMALKLGL----DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
BLAST of Carg04013 vs. Swiss-Prot
Match:
sp|Q9FRI5|PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)
HSP 1 Score: 913.3 bits (2359), Expect = 1.9e-264
Identity = 510/794 (64.23%), Postives = 629/794 (79.22%), Query Frame = 0
Query: 7 VRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWKSSNLVH 66
VR +ANRYAA L+LC P +S LAR VH ++I GF+PR H++NRL+D+Y KSS L +
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 67 ARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNV 126
ARQLFDEI PD +ARTT+++ Y G++ +AR +F P+ MRDT+ YNAMITGFSHN
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 127 DGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTGLVSSVL 186
DG+SAI LF M+ F+PD+FTF SVL+ LAL+ D+E+QC Q H A +KSG G ++SV
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS 187
Query: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRND--DLXXXXX 246
NAL+SVY KCASSP SL+ SARK+FDE+ ++DE +WTT++TGYV+N DL
Sbjct: 188 NALVSVYSKCASSP-----SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDL-GEEL 247
Query: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGF 306
XXXXXXXXXX++AL + R+M G+ELDEFTY SVI ACA G
Sbjct: 248 LEGMDDNMKLVAYNAMXXXXXXXXXXQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 307
Query: 307 FQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXX 366
QLGK++HAY+L+ E DF NSL++LY+K GK D AR IF +MP KD+VSWXX
Sbjct: 308 LQLGKQVHAYVLRRE-----DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWXX 367
Query: 367 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPC 426
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +EPC
Sbjct: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEPC 427
Query: 427 DYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFL 486
DYAF+GAI +C+VLG+ NG+Q HAQL+ +G DSSLS GNA+I+MYA+CGVVE AR VF
Sbjct: 428 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 487
Query: 487 TMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEE 546
TMP +DSVSWNA+IAALGQHGHG +A ++YE+MLK+GI PDRIT LTVL+ACSH+GLV++
Sbjct: 488 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 547
Query: 547 GRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGC 606
GR+YF+SM Y I PG DHYAR+IDL CR+GKFSDA++ I+S+P KP A IWEALL+GC
Sbjct: 548 GRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGC 607
Query: 607 RIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPA 666
R+HGNM+LG+ AA+KLF L+P+HDGTY+LLSNM+A G+W +VARVRKLMRDRGVKKE A
Sbjct: 608 RVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVA 667
Query: 667 CSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE-HKE 726
CSW E+E +VH FLVDDT HPE +VY YL++L EM++ GYVPDT +VLHD+ES+ HKE
Sbjct: 668 CSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKE 727
Query: 727 YALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRF 786
L THSE++AV FGLMKLPPG T+R+FKNLR CGDCHN F+F+S VV+R+I++RD KRF
Sbjct: 728 DMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRF 787
Query: 787 HHFKNGECSCGNYW 798
HHF+NGECSCGN+W
Sbjct: 788 HHFRNGECSCGNFW 790
BLAST of Carg04013 vs. Swiss-Prot
Match:
sp|O81767|PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 458.0 bits (1177), Expect = 2.2e-127
Identity = 276/812 (33.99%), Postives = 393/812 (48.40%), Query Frame = 0
Query: 60 KSSNLVHARQLFD-EIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAM 119
+S+ +HAR + +I N A+ L+ Y LGN+ +AR F+ + RD +N M
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAK--LVNLYCYLGNVALARHTFD--HIQNRDVYAWNLM 127
Query: 120 ITGFSHNVDGHSAIGLFHA-MRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKS 179
I+G+ + I F M S PD TF SVL A ++D ++H +K
Sbjct: 128 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKF 187
Query: 180 GTGLVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRND 239
G + VYV + L S + +AR LFDEMP RD +W +I+GY ++
Sbjct: 188 G---------FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 247
Query: 240 DLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVIS 299
+ ++ALTL +R +D T S++S
Sbjct: 248 N-------------------------------AKEALTLSNGLR----AMDSVTVVSLLS 307
Query: 300 ACANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVK 359
AC G F G +H+Y +K+ L L VSN LI LY ++G++ + +F M V+
Sbjct: 308 ACTEAGDFNRGVTIHSYSIKHGLESE----LFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 367
Query: 360 DIVSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 419
D++SW +
Sbjct: 368 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 427
Query: 420 --------------------------------------------------LDGYEPCDYA 479
+ GY +A
Sbjct: 428 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 487
Query: 480 ----------------------FAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNA 539
+ + ACS G+L G +LH +L+ G + + +
Sbjct: 488 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 547
Query: 540 MISMYARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPD 599
+ MY +CG +E A S+F +P V+SV WN +IA G HGHG KA L+++ML EG+ PD
Sbjct: 548 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 607
Query: 600 RITFLTVLSACSHSGLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFI 659
ITF+T+LSACSHSGLV+EG+ F M +YGITP HY M+D++ RAG+ A FI
Sbjct: 608 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 667
Query: 660 DSMPCKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWN 719
SM +P A IW ALL+ CR+HGN+DLG A+E LFE+ P+H G +VLLSNMYA+ G+W
Sbjct: 668 KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 727
Query: 720 DVARVRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAG 779
V +R + +G++K P S EV+NKV VF + HP +Y L L ++K G
Sbjct: 728 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 787
Query: 780 YVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFK 798
YVPD ++VL D+E + KE+ L +HSERLA+ F L+ P T+R+FKNLR+CGDCH+ K
Sbjct: 788 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 823
BLAST of Carg04013 vs. Swiss-Prot
Match:
sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 444.5 bits (1142), Expect = 2.5e-123
Identity = 246/692 (35.55%), Postives = 363/692 (52.46%), Query Frame = 0
Query: 111 DTIFYNAMITGFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQM 170
+ + + MIT AI F M S F D FT +SV SA A + +N Q+
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGKQL 292
Query: 171 HGAVVKSGTGLVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLI 230
H ++S GLV V +L+ +Y KC S+ + RK+FD M ++WT LI
Sbjct: 293 HSWAIRS--GLVDDVECSLVDMYAKC------SADGSVDDCRKVFDRMEDHSVMSWTALI 352
Query: 231 TGYVRNDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIG-VELDE 290
TGY++N +L +A+ LF +M G VE +
Sbjct: 353 TGYMKNCNL------------------------------ATEAINLFSEMITQGHVEPNH 412
Query: 291 FTYTSVISACANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARH 350
FT++S AC N ++GK++ K L N SV+NS+I+++ K +++ A+
Sbjct: 413 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS----SVANSVISMFVKSDRMEDAQR 472
Query: 351 IFYEMPVKDIVSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
F + K++VS+
Sbjct: 473 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA--------------- 532
Query: 411 XXXXXXXRLDGYEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISM 470
+ FA ++ + +GS+ G Q+H+Q++ LG + + NA+ISM
Sbjct: 533 ----------------FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 592
Query: 471 YARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITF 530
Y++CG ++ A VF M + +SW +MI +HG ++ E + QM++EG+ P+ +T+
Sbjct: 593 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 652
Query: 531 LTVLSACSHSGLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMP 590
+ +LSACSH GLV EG R+FNSM+E++ I P +HYA M+DL CRAG +DA FI++MP
Sbjct: 653 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 712
Query: 591 CKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVAR 650
+ +W L CR+H N +LG AA K+ EL P Y+ LSN+YA G+W +
Sbjct: 713 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 772
Query: 651 VRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPD 710
+R+ M++R + KE CSW EV +K+H F V DT HP +Y+ L+ L E+K+ GYVPD
Sbjct: 773 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 832
Query: 711 TKYVLHDMESEH----KEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFK 770
T VLH +E E+ KE L HSE++AV FGL+ VRVFKNLR+CGDCHNA K
Sbjct: 833 TDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMK 850
Query: 771 FMSKVVRREIVVRDGKRFHHFKNGECSCGNYW 798
++S V REIV+RD RFHHFK+G+CSC +YW
Sbjct: 893 YISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
BLAST of Carg04013 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 444.5 bits (1142), Expect = 2.5e-123
Identity = 254/723 (35.13%), Postives = 382/723 (52.84%), Query Frame = 0
Query: 78 DAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNVDGHSAIGLFHA 137
D A T L Y+ +N AR++F+ P RD + +N ++ G+S N A+ + +
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKS 228
Query: 138 MRRSNFRPDDFTFTSVL---SALALIVDNEQQCGQMHGAVVKSGTGLVSSVLNALLSVYV 197
M N +P T SVL SAL LI + ++HG ++SG + ++ AL+ +Y
Sbjct: 229 MCEENLKPSFITIVSVLPAVSALRLISVGK----EIHGYAMRSGFDSLVNISTALVDMYA 288
Query: 198 KCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLXXXXXXXXXXXXXXX 257
KC S + +AR+LFD M +R+ ++W ++I YV+N++
Sbjct: 289 KCGS---------LETARQLFDGMLERNVVSWNSMIDAYVQNEN---------------- 348
Query: 258 XXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGFFQLGKELHAY 317
++A+ +F+KM GV+ + + + ACA+ G + G+ +H
Sbjct: 349 ---------------PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 408
Query: 318 ILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXXXXXXXXXXXX 377
++ L+ N +SV NSLI++Y K +VD A +F ++ + +VSW
Sbjct: 409 SVELGLDRN----VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW------------ 468
Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPCDYAFAGAITA 437
R +P + + ITA
Sbjct: 469 -------------------NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 528
Query: 438 CSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFLTMPFVDSVSW 497
+ L + + +H ++ D ++ + A++ MYA+CG + AR +F M +W
Sbjct: 529 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 588
Query: 498 NAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEEGRRYFNSMFE 557
NAMI G HG G A EL+E+M K I P+ +TFL+V+SACSHSGLVE G + F M E
Sbjct: 589 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 648
Query: 558 NYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGCRIHGNMDLGV 617
NY I DHY M+DL RAG+ ++A +FI MP KP ++ A+L C+IH N++
Sbjct: 649 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 708
Query: 618 EAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPACSWTEVENKV 677
+AAE+LFEL P G +VLL+N+Y W V +VR M +G++K P CS E++N+V
Sbjct: 709 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 768
Query: 678 HVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESEHKEYALATHSERLA 737
H F T HP+ +Y +LE+L +K+AGYVPDT VL +E++ KE L+THSE+LA
Sbjct: 769 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLA 809
Query: 738 VGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRFHHFKNGECSCG 797
+ FGL+ G T+ V KNLR+C DCHNA K++S V REIVVRD +RFHHFKNG CSCG
Sbjct: 829 ISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCG 809
BLAST of Carg04013 vs. Swiss-Prot
Match:
sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 440.3 bits (1131), Expect = 4.7e-122
Identity = 247/714 (34.59%), Postives = 361/714 (50.56%), Query Frame = 0
Query: 84 TLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMITGFSHNVDGHSAIGLFHAMRRSNF 143
+LI Y L AR +F+ ++ RD I +N++I G + N A+ LF + R
Sbjct: 355 SLINMYCKLRKFGFARTVFDN--MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 414
Query: 144 RPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTGLVSSVLNALLSVYVKCASSPLVS 203
+PD +T TSVL A + + + Q+H +K S V AL+ Y S
Sbjct: 415 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY---------S 474
Query: 204 SSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLXXXXXXXXXXXXXXXXXXXXXXXX 263
+ M A LF E D + W ++ GY ++ D
Sbjct: 475 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHD------------------------- 534
Query: 264 XXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACANGGFFQLGKELHAYILKNELNPN 323
L LF M G D+FT +V C GK++HAY +K+
Sbjct: 535 ------GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS----G 594
Query: 324 HDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIVSWXXXXXXXXXXXXXXXXXXXXX 383
+D L VS+ ++ +Y K G + A+ F +PV D V+W
Sbjct: 595 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW--------------------- 654
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDGYEPCDYAFAGAITACSVLGSLEN 443
RL G P ++ A A S L +LE
Sbjct: 655 ----------TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 714
Query: 444 GRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAARSVFLTMPFVDSVSWNAMIAALGQ 503
GRQ+HA + L + +G +++ MYA+CG ++ A +F + ++ +WNAM+ L Q
Sbjct: 715 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 774
Query: 504 HGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSGLVEEGRRYFNSMFENYGITPGED 563
HG G + +L++QM GI PD++TF+ VLSACSHSGLV E ++ SM +YGI P +
Sbjct: 775 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 834
Query: 564 HYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEALLAGCRIHGNMDLGVEAAEKLFEL 623
HY+ + D RAG A+N I+SM + A ++ LLA CR+ G+ + G A KL EL
Sbjct: 835 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 894
Query: 624 MPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTV 683
P YVLLSNMYA +W+++ R +M+ VKK+P SW EV+NK+H+F+VDD
Sbjct: 895 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRS 954
Query: 684 HPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESEHKEYALATHSERLAVGFGLMKLP 743
+ + +Y ++++ ++K+ GYVP+T + L D+E E KE AL HSE+LAV FGL+ P
Sbjct: 955 NRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTP 990
Query: 744 PGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDGKRFHHFKNGECSCGNYW 798
P +RV KNLR+CGDCHNA K+++KV REIV+RD RFH FK+G CSCG+YW
Sbjct: 1015 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of Carg04013 vs. TrEMBL
Match:
tr|A0A0A0LL72|A0A0A0LL72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368270 PE=4 SV=1)
HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 683/797 (85.70%), Postives = 736/797 (92.35%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRN +DVRVLANRY AQL LCCPQN SS+SLARTVH H+I SGFK RGH+VNRL+DIYWK
Sbjct: 1 MRNVLDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+ V+AR+LFDEIP PD +ARTTLITAYS LGNL MAREIFN TPL+MRDT+FYNAMIT
Sbjct: 61 SSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SH DGHSAI LF AMR +NF+PDDFTF SVLSA LI +E+QCGQMHG VVK G
Sbjct: 121 GYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIE 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
+ +VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMP+R+E WTTLITGYVRN D X
Sbjct: 181 IFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDXX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALTLFRKMRL+GV++DE TYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTLFRKMRLLGVQVDESTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
+GGFF LGK++HAYILKNELNP+ DFLLSV N+LITLYWKYGKVDGAR IFYEMPVKDI+
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LDG
Sbjct: 361 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEP DYAFAGAITACSVLG+LENGRQLHAQ++HLGHDS+LS+GNAMI+MYARCG+VEAAR
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
++FLTMPFVD VSWN+MIAALGQHGHGVKA ELYEQMLKEGILPDR TFLTVLSACSH+G
Sbjct: 481 TMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LVEEG RYFNSM ENYGI PGEDHYARMIDLFCRAGKFSDAKN IDSMP + APIWEAL
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCR HGNMDLG+EAAEKLF+L+PQHDGTYVLLSNMYA++GRWNDVAR RKLMRDRGVK
Sbjct: 601 LAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLS+YNYLE+L+LEMKK GY+PDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYAL+THSE+LAV FGLMKLP GATVRVFKNLRICGDCHNA KFMSKVV REIVVRDG
Sbjct: 721 HKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFKNGECSC NYW
Sbjct: 781 KRFHHFKNGECSCRNYW 797
BLAST of Carg04013 vs. TrEMBL
Match:
tr|A0A1S3BBZ8|A0A1S3BBZ8_CUCME (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucumis melo OX=3656 GN=LOC103488018 PE=4 SV=1)
HSP 1 Score: 1149.8 bits (2973), Expect = 0.0e+00
Identity = 640/798 (80.20%), Postives = 720/798 (90.23%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRNA+D+R++ANRYA +LQLC PQ+P+SFSLAR VHAHMI SGFKPRGH +NRLL++Y K
Sbjct: 1 MRNALDIRLVANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSNLV+ARQLFDEIPNP A+ RTTLITAY LGNL + RE+FNGTPL MRD++FYNAMIT
Sbjct: 61 SSNLVYARQLFDEIPNPGAITRTTLITAYCALGNLELGREVFNGTPLYMRDSVFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SHN DGHSA+ LF AMRR +FRPDDFTFTSVLSAL L+VDNEQQCGQMH AVVK+G G
Sbjct: 121 GYSHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLVVDNEQQCGQMHCAVVKTGMG 180
Query: 181 LV-SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDL 240
V SSVLNALLSVYVK AS L S S M SARKLF+EMP+RDELTWTT+ITGYVRNDDL
Sbjct: 181 CVSSSVLNALLSVYVKRASE-LGISCSAMVSARKLFEEMPKRDELTWTTMITGYVRNDDL 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISAC 300
XXXXXXXXXXXXXXXXXXXXXXXXXX ++AL L RKM +G++ D+ TYT++ISAC
Sbjct: 241 NXXXXXXXXXXXXXXXXXXXXXXXXXXCGCFQEALILCRKMCFLGIQYDDITYTTIISAC 300
Query: 301 ANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDI 360
AN GFFQ+GK++HAYILKNELNPN F LSVSN+LITLY K KVD AR IFY MPV+ I
Sbjct: 301 ANVGFFQMGKQVHAYILKNELNPNRSFCLSVSNALITLYCKNNKVDDARKIFYSMPVRSI 360
Query: 361 VSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLD 420
++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+
Sbjct: 361 ITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLN 420
Query: 421 GYEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAA 480
G++PCD+AFAGA+TACSVLG+LENGRQLHAQL+HLG++SSLS+GNAMISMYARCGVVEAA
Sbjct: 421 GFKPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYARCGVVEAA 480
Query: 481 RSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHS 540
SVF+TMP VD VSWN+MIAALGQHGHGVKA EL++QMLKEG+ PDRITFLTVL+ACSH+
Sbjct: 481 ESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHA 540
Query: 541 GLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEA 600
GLVEEGR YFNSM E+YGITPGEDHYARM+DLFCRAG FS A+N ID+MP KPGAP+WEA
Sbjct: 541 GLVEEGRHYFNSMLESYGITPGEDHYARMVDLFCRAGMFSYARNVIDTMPSKPGAPVWEA 600
Query: 601 LLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGV 660
LLAGCRIHGN+DLG+EAAE+LF+LMPQHDG YVLLSNMYA+VGRWNDVA+VRKLMRD+ V
Sbjct: 601 LLAGCRIHGNVDLGIEAAEQLFQLMPQHDGAYVLLSNMYADVGRWNDVAKVRKLMRDQAV 660
Query: 661 KKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMES 720
+KEPACSW EVENKVHVF+VDD VHPEVLSVY YLE+L LEMKK GY+PDTK+VLHDME
Sbjct: 661 RKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEY 720
Query: 721 EHKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRD 780
E KE+AL+THSE+LAVGFG+MKLPPGATVRVFKN+RICGDCHNAFKFMSKV REI+VRD
Sbjct: 721 EQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVASREIIVRD 780
Query: 781 GKRFHHFKNGECSCGNYW 798
KRFHHFKNGECSC +YW
Sbjct: 781 RKRFHHFKNGECSCRDYW 797
BLAST of Carg04013 vs. TrEMBL
Match:
tr|A0A0A0LPE4|A0A0A0LPE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365100 PE=4 SV=1)
HSP 1 Score: 1143.6 bits (2957), Expect = 0.0e+00
Identity = 639/798 (80.08%), Postives = 720/798 (90.23%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRNA+D+R+LANRYA +LQLC PQ+P+SFSLAR VHAHMI SGFKPRGH +NRLL++Y K
Sbjct: 20 MRNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 79
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN+V+ARQLF+EIPNPDA+ARTTLITAY LGNL + REIFNGTPL MRD++FYNAMIT
Sbjct: 80 SSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMIT 139
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G++HN DGHSA+ LF AMRR +FRPDDFTFTSVLSAL L V NEQQCGQMH AVVK+G G
Sbjct: 140 GYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMG 199
Query: 181 LV-SSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDL 240
V SSVLNALLSVYVK AS L S M SARKLFDEMP+RDELTWTT+ITGYVRNDDL
Sbjct: 200 CVSSSVLNALLSVYVKRASE-LGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDL 259
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISAC 300
XXXXXXXXXXXXXXXXXXXXXXXXXX ++ALTL RKMR +G++ D+ TYT++ISAC
Sbjct: 260 NXXXXXXXXXXXXXXXXXXXXXXXXXXCGCFQEALTLCRKMRFLGIQFDDITYTTIISAC 319
Query: 301 ANGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDI 360
AN G FQ+GK++HAYILKNELNPNH F LSVSN+LITLY K KVD AR IFY MPV++I
Sbjct: 320 ANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNI 379
Query: 361 VSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLD 420
++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D
Sbjct: 380 ITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 439
Query: 421 GYEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAA 480
G+EPCD+AFAGA+TACSVLG+LENGRQLHAQL+HLG++SSLS+GNAMISMYA+CGVVEAA
Sbjct: 440 GFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAA 499
Query: 481 RSVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHS 540
SVF+TMP VD VSWN+MIAALGQHGHGVKA EL++QMLKEG+ PDRITFLTVL+ACSH+
Sbjct: 500 ESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHA 559
Query: 541 GLVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEA 600
GLVE+GR YFNSM E+YGITP EDHYARM+DLFCRAG FS A+ IDSMP KPGAP+WEA
Sbjct: 560 GLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEA 619
Query: 601 LLAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGV 660
LLAGCRIHGNMDLG+EAAE+LF+LMPQ+DGTYVLLSN+YA+VGRWNDVA+VRKLMRD+ V
Sbjct: 620 LLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAV 679
Query: 661 KKEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMES 720
+KEPACSW EVENKVHVF+VDD VHPEVLSVY YLE+L LEMKK GY+PDTK+VLHDME
Sbjct: 680 RKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEY 739
Query: 721 EHKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRD 780
E KE+AL+THSE+LAVGFG+MKLPP ATVRVFKN+RICGDCHNAFKFMSKV RREI+VRD
Sbjct: 740 EQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 799
Query: 781 GKRFHHFKNGECSCGNYW 798
KRFHHFKNG+CSC +YW
Sbjct: 800 RKRFHHFKNGDCSCRDYW 816
BLAST of Carg04013 vs. TrEMBL
Match:
tr|A0A2I4ENP7|A0A2I4ENP7_9ROSI (pentatricopeptide repeat-containing protein At1g25360 OS=Juglans regia OX=51240 GN=LOC108991303 PE=4 SV=1)
HSP 1 Score: 1125.2 bits (2909), Expect = 0.0e+00
Identity = 625/797 (78.42%), Postives = 715/797 (89.71%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
M NA+DVR +ANRYA LQLC +NP+S+ LA+T+HAHMI GFKPRGH++NRL+D Y K
Sbjct: 1 MSNALDVRTVANRYATLLQLCRSRNPTSYPLAQTIHAHMIAFGFKPRGHILNRLIDFYCK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SSN+ +AR LFDEIP PD VARTTLI AYS GNL +ARE+F GTPL+MRDT+FYNAMIT
Sbjct: 61 SSNIAYARHLFDEIPEPDIVARTTLIAAYSAAGNLKLAREVFGGTPLSMRDTVFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SHN DGH+A+ LF MRR FRPD+FTFTSVL ALALI D ++QC Q+HGAV+KSGTG
Sbjct: 121 GYSHNNDGHAAMELFRDMRREAFRPDNFTFTSVLGALALIADQKKQCQQIHGAVLKSGTG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
V+SVLNAL+SVYVKCASSPL SSSSL+ +A+KLFDEMP+RDELTWTT+ITGYVRNDD X
Sbjct: 181 FVTSVLNALISVYVKCASSPLESSSSLLGAAKKLFDEMPERDELTWTTIITGYVRNDDXX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXXX ++AL +FRKM ++G+ LDEFTYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFIQEALEMFRKMHMMGIRLDEFTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
NGG F+ GK++HAYIL+ E P DF LSV+N+L+TLYWK GKVD AR IF MPV+D V
Sbjct: 301 NGGLFKHGKQVHAYILRTERKPEPDFSLSVNNALVTLYWKCGKVDEAREIFNAMPVRDFV 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++G
Sbjct: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
+EPCDYAFAGAIT+C+VLG+LE+GRQLHAQL+ LGHDSSLS GNA+I+MYARCGVVEA+
Sbjct: 421 FEPCDYAFAGAITSCAVLGALEHGRQLHAQLVQLGHDSSLSAGNALITMYARCGVVEASN 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
VFLTMP++DSVSWNAMIAALGQHGHG++A +L+E+MLKE ++PDRITFLTVLSACSH+G
Sbjct: 481 CVFLTMPYLDSVSWNAMIAALGQHGHGLQAIKLFEEMLKEDLVPDRITFLTVLSACSHAG 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
LV+EGR YF+SM YGITPGEDHYAR+IDL RAGKFS+AK+ + SMP +PGA IWEAL
Sbjct: 541 LVKEGRHYFDSMCGFYGITPGEDHYARLIDLLGRAGKFSEAKDVLKSMPFEPGAAIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCRIHGNM+LG++AAE+LFELMPQHDGTYVLLSNMYA GRWNDVA+VRKLMRDRG+K
Sbjct: 601 LAGCRIHGNMELGIQAAEQLFELMPQHDGTYVLLSNMYATAGRWNDVAKVRKLMRDRGIK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEP CSW EVENKVHVFLVDDTVH EV +VYN+LE+L LEM+K GYVPDTK+VLHDME+E
Sbjct: 661 KEPGCSWVEVENKVHVFLVDDTVHHEVQAVYNHLEQLVLEMRKLGYVPDTKFVLHDMENE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKE AL+THSE+LAV FGLMKLP GAT+RVFKNLRICGDCHNAFK+MSKVV REIVVRDG
Sbjct: 721 HKESALSTHSEKLAVVFGLMKLPLGATIRVFKNLRICGDCHNAFKYMSKVVGREIVVRDG 780
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHF+NGECSCGNYW
Sbjct: 781 KRFHHFRNGECSCGNYW 797
BLAST of Carg04013 vs. TrEMBL
Match:
tr|A0A1S4DVG9|A0A1S4DVG9_CUCME (pentatricopeptide repeat-containing protein At1g25360-like OS=Cucumis melo OX=3656 GN=LOC103488043 PE=4 SV=1)
HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 642/797 (80.55%), Postives = 692/797 (86.83%), Query Frame = 0
Query: 1 MRNAIDVRVLANRYAAQLQLCCPQNPSSFSLARTVHAHMIVSGFKPRGHLVNRLLDIYWK 60
MRN +DVRVLANRY AQL LCCPQNPSS+SLARTVHAH+I SGFK RGH+VNRL+D+YWK
Sbjct: 1 MRNVLDVRVLANRYVAQLNLCCPQNPSSYSLARTVHAHVIASGFKLRGHIVNRLIDVYWK 60
Query: 61 SSNLVHARQLFDEIPNPDAVARTTLITAYSNLGNLNMAREIFNGTPLNMRDTIFYNAMIT 120
SS+ V+ARQLFDEIP PD +ARTTLITAYS LGNL MAREIFN TPL+MRDT+FYNAMIT
Sbjct: 61 SSDFVYARQLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMIT 120
Query: 121 GFSHNVDGHSAIGLFHAMRRSNFRPDDFTFTSVLSALALIVDNEQQCGQMHGAVVKSGTG 180
G+SH DGHSAI LF AMR +NF+PDDFTF SVLSA LI D+E+QCGQMHGAVVKSG G
Sbjct: 121 GYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFDDERQCGQMHGAVVKSGIG 180
Query: 181 LVSSVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPQRDELTWTTLITGYVRNDDLX 240
L +VLN+LLSVYVKCASSPLVSSSSLMASARKLFDEMP+R+E WTTLITGYVRNDD X
Sbjct: 181 LFPAVLNSLLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNDDXX 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDALTLFRKMRLIGVELDEFTYTSVISACA 300
XXXXXXXXXXXXXXXXXXXXXXXXXXX EDALTLFRKMRL+GV+LDE TYTSVISACA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXGLFEDALTLFRKMRLLGVQLDESTYTSVISACA 300
Query: 301 NGGFFQLGKELHAYILKNELNPNHDFLLSVSNSLITLYWKYGKVDGARHIFYEMPVKDIV 360
+GGFF LGK++HAYILKNELNP+ +FLLSV N+LITLYWKYGKVDGAR IFYEMPVKD++
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRNFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDVI 360
Query: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG
Sbjct: 361 SWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDG 420
Query: 421 YEPCDYAFAGAITACSVLGSLENGRQLHAQLIHLGHDSSLSIGNAMISMYARCGVVEAAR 480
YEP DYAFAGAITACSVLG+LENGRQLHAQ++HLGHDS+LS+GNAMI+MYARCGVVEAAR
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGVVEAAR 480
Query: 481 SVFLTMPFVDSVSWNAMIAALGQHGHGVKATELYEQMLKEGILPDRITFLTVLSACSHSG 540
+VFLTMPFVD VSWNAMIAALGQHGHG+KA ELYEQMLKE
Sbjct: 481 TVFLTMPFVDPVSWNAMIAALGQHGHGIKAIELYEQMLKE-------------------- 540
Query: 541 LVEEGRRYFNSMFENYGITPGEDHYARMIDLFCRAGKFSDAKNFIDSMPCKPGAPIWEAL 600
GKFSDAKN IDSMP + APIWEAL
Sbjct: 541 -----------------------------------GKFSDAKNVIDSMPFEARAPIWEAL 600
Query: 601 LAGCRIHGNMDLGVEAAEKLFELMPQHDGTYVLLSNMYANVGRWNDVARVRKLMRDRGVK 660
LAGCR HGNMDLG+EAAEKLF+L+PQHDGTYVLLSNMYA++GRWNDVAR RKLMRDRGVK
Sbjct: 601 LAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
Query: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSVYNYLEELSLEMKKAGYVPDTKYVLHDMESE 720
KEPACSWTEVENKVHVFLVDDTVHPEVLS+YNYLE+L+LEMKK GY+PDTKYVLHDMESE
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKLGYIPDTKYVLHDMESE 720
Query: 721 HKEYALATHSERLAVGFGLMKLPPGATVRVFKNLRICGDCHNAFKFMSKVVRREIVVRDG 780
HKEYAL+THSE+LAV FGLMKLP GATVRVFKNLRICGDCHNA KFMSKV REIVVRDG
Sbjct: 721 HKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVAGREIVVRDG 742
Query: 781 KRFHHFKNGECSCGNYW 798
KRFHHFK GECSCGNYW
Sbjct: 781 KRFHHFKYGECSCGNYW 742
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022951057.1 | 0.0e+00 | 99.37 | pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita moschata] | [more] |
XP_023002238.1 | 0.0e+00 | 98.37 | pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita maxima] | [more] |
XP_023537093.1 | 0.0e+00 | 90.46 | pentatricopeptide repeat-containing protein At1g25360-like [Cucurbita pepo subsp... | [more] |
XP_022144208.1 | 0.0e+00 | 91.72 | pentatricopeptide repeat-containing protein At1g25360-like [Momordica charantia]... | [more] |
XP_004152758.1 | 0.0e+00 | 85.70 | PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like [Cucumis s... | [more] |
Match Name | E-value | Identity | Description | |
AT1G25360.1 | 1.0e-265 | 64.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33990.1 | 1.2e-128 | 33.99 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 1.4e-124 | 35.13 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49170.1 | 1.4e-124 | 35.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33170.1 | 2.6e-123 | 34.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |