Carg03999 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATTTTTCGTTGAAGTTCTGTTTGGCGCCAATTAAAATTAAACAGAGGCGGGAGAACGGAGAATCATCGAGACCTCTCCGTGGTTTTCTAATTGACCTAAGCGCCGCCGCCAACGACGACGACGATCGTCTCTGAATCATTCCCGATCGTACTGTAGTTCGTTGTTTTTCTGCTTTCTTCCGGAGTGAGTTTCGATCAATTCTATCTTGTTTGCGGCTGGTTTATTTTCTGTTTGTCTAGACTGTATTCTGGACATTTCAGAGGTACTTATCGGCTTCTCTCTCGCTAGTCTTGATTTTTGTTAACTTGATTGTTGATTCGCTTACTAGTATTGCATGAACTGATCCTGTGCTACGGATTTTATCTTTCTTTTCAATTTTCTGGTTGTTGCTTGGACTCGATTTTGTTTACCGGTTTCGGAATCTGATGATGATTGATTTTCGGCTAAATAATATATTCTTTTGCGTCTGAGTATTTCTTCTTTCTCAATTATGAAATCTCTTGTGGTTCATCGTTATGCGTCGCCGATTTTGGAGAATTTTTGCTTTGAGTGCTATTTTTTTGCTCACGGAAAGTGAAGTATAGCTTGTATTCGTGTGTATGCCTTTATCCTTTGTGCATTCCATTGATACACCATAATCGAATATGTTTTATGCTCCTGTACAAAATTGTGTGGTTAATCTGGTTTTGTATGCTTCGATTTTTCTATCTGAATCATTCCCGACCGTACTGTAGTTCGTTGTTTTTCTGCTTTCTTCCGGATTGAGTTTCGATCAATTCTATTTTGTTTTCGGCTGGTTTTATTCTCTGTTTGTCTAGACTGTATTCTGGACGCTTCAGAGGTATTTATCGGCTTCTCTCTCGCTAGTCTTGATTTTTGTTAACTTGATTGCTGATTCGCTTACTAGTATTGCATGAATTTATCCTCTGCTATGGATTTTATCTTTCTTTTCAATTTTCTGATTGTTGCTTGGACTCGATTTTGTTTACCGGTTTCTGAATTTGGTGATGATTGATTTTCGGCTAAATAGTGAATTCTTTTCCGTCCGAGTATTTTTTCTTTCTCAAATATGAAATCTCCTGTGGTTCATCGTTATGCGTCGCCGATTTTGGAGGAATTTTTGCTTTGAGTGCTATTTTTTTTGCTCACGGAAAGTGAAGGAAGTATAGCTTGTATTCGTGTGTATGCCTTATCCTTTGTGCATTCCATTGATACACCATAAACGAATATGTTTTATGTTCTTGTTCAAAATTGTGTGGTTTAATCTGGTTTTGTATACTTTGATTTTCTATTTTAATTGCGCTGCCTATTCACTTTCTCGGATCATAAAATGCTTCTAGATTAAAGAATTAATTGTACTTTTATGCTTTAGGAATATTGAATTCATCGGTTTCTATAACTCTTTCTTTTTGTTCAAATCTTAGGTCCCTACAAAATGATAGGAGCACTAATCACCAGAGGACTCACGTATGTTCTGTTTATAATTATACTCTCGATTTATATGTTCAAAATTTTTTCTCTATAAATTATGTTCTTCATGTTCTAAGATCAAGTTTCATCATGGCGATAGGATGATTTTGGGATATGCCTATCCTGCTTATGAGTGTTACAAAACTGTCGAAACCAGTCAGCCACAGATTGAGCAACTTCATTATTGGTGTCAGTACTGGTATGACGTTACACTCTTCAAATTTCACCAATATTGGTTTTGCAATAATATCATTTAATTTCTTGATTTTGAAAGTTTCTCTTTGGTGGACGCAGGATTCTGGTGGCCATATTGACGATTCTCGAGAGAATTGGTGATTCTTTTGTTTCATGGTAAGATTTCGAGCCTTCTTTAATTTTAATGTTAAATATAATAGAAGTGATGTTTAGAAATAGTAATGAAAAATCATCTATCCTTCATTTTTTTTTTCAAAACGAAAATGTGTATTTTATTATAAAAAGTTATTTGGATTTGAATTGTTTCCCTTTTAGCTTCAAATATTCTCAAAACTGCTATAATTTTTTTCTTTCTTTTATTGAAAATAAAAATTCATATAACTTTGACCGTTAGTTTTTATAGGATTATTGTCTTTAGAATATTTATTTATTAATGCTGTCTTTCATGAAAGTCCCACCTCAGCTAATTTAAAGAATGATCTGGGTTTATAATCAAGAAATGCTATCTCCATTGGTAGGAGGCATTTTGAAAAGTCTAAGGCAAGACTACGAGAGTTTATGCTCAAAGTGGACATATCATAACATTGTCGAGAATCCTGTTTCTTGTGTATCCTTTTTTAACGTAGTTTTGAAAATAATTCTTCAATTTCTCTTAAGATTAGCAATATTTTTCTTTGGCTGGAAGGTTTCCGTTCTACAATGAAGCAAAGTTGGCATTCTTCGTTTATCTGTGGCATCCAAAAACAAAGGTATGAGGAAGGTAATATCAATATGGTTAGCATATTTAATCTTTATATGTTTAGAATATTAGTAAATATGGCACGAAACATATTGATGTGGATAGTTATTTTTAGAGAAAAAAATTACAAATATAAATACTTATGAAAAATATTTCAATTAACAAATAAACCTTTCCTACTTTTTAAATAAGTTTATTCAAATTTCTTACCGTGATATTTTATTGAACTTTTATATATATATATATATATATATATATTTCATCAATATTTTAATAATTTAATGAAAATGTCCATTTTATTAGTAGAATGTTCTTGAATTCTTGCCCTCATCATTGCTTAATTAATAAAAAAATTTCTAATGTACAAAGGGAACCCTTTCGTCATTGTCAGGGGACCATAGTTGTTGGTTTAGTTGTCATTGTGTCAATTGTTGTTGATAATATAGAATTTATAAATACAGTGAATTAATTGAAACATTTCATATTTAGTTATTTAGTCAAAAGTTCATTAAAATCTCCAATACTTTTTAATGCAAATATCGTATGTACTGTCAGGGAGCGAACCATGTGTATGATTCATTCTTCCGACCATATGTTTCGAAGCACGAGCCTCATATTGACCGCAGCTTGACGGAATTCAAGCTGAAGGCTAGTGATACTGCTTTTATCTACTTTCAAAGAGCTGCCTCCTACTTTCAAACAACATTGTTTGATATATTTGCAAAGTTTGCTCATCAATCGACCACCCCTGCTGCTCCCAAGGTAATAAACGCAACACCATGATTTTCACATTATTTTACTTAAAGATACACACCACTATATATACTATCACTAAAATACCTACGCACTGTTGAACAACTGAGTACCTACACAATTTTTCAACCTTTTATAATTGTTTTTAAAAATAATTATAATAAATACTTTTCCTATCTAATCGATTTAAAAATGAGATACTTTTCGATTTTGTAAAATGATTTTAAATTTTTGGAGATGCTTTCAATGGAAGTAGTTAACTAGATCTTTCTTTTGTATTTTACGTAATTACTAAAAAAAATGTGTTTAAATAATTTCACTACTTAGTCCTATTTAACACATTCTAATTTTAGCTTTCTAGTTTTAAAAGTAAGGCTGTTTTATGTTTTTTATTTTTTATTTTTTGCCTTTTTTTTTTATTTTTTTTTAACGTAAATTTAAAATTAGATATAGATTTTTCCCATGCAAGAGTATATGCATAAAACAGCATATTATTTTATACATACAAAACTTTTTTTTAAAAAAAATAATTAATTTTGATATATGATAAAAATAAATTAAATTATCGCATGCAAGATGCATGTTAGTATATATATCCTTCTTTAATAATGATTATCAATTTTGATCTTTTAAATGTTTTCTCATGTAATTTACACAAAATTAACTTTTAAAGATTCTGTTGTATGTCCTCAAAATTAGGGAAGTTTAAGTTGCTTTGACTTATTTTTTAGTTTAAACATTTTTTCTTAAAATATTTTTGAAAATACGCTCTCTTTTTTTAAAGAGTTTTGTTTGCATATTTGTCTAGTACACTACATTCAAAAGTGATTATACTCTTAACATATTTTTTTACGTTCTTTGGATTTTTTTTTTTTAAATTTCAGTTTAAATCCACTTTTTATCATCTCTAACTGTTTCATTGAGTTTGTACATCAATTTATTTTTAAAAAAATATTTTTAATCGTTTAAATTTATTTTCAAAACTATATTAAACACCTTTTCAGTAGTCATCTATAAAAAGCATAGTGAAAAAAAATCAATTTTTAAAACAAAGGGGCAAAAATTTAGATGAACCATTTTTCAGAAGTGGAGAAACTAATTGTTTGAAAATTTATTGACAGTTTTTTTTAGGTAAAAAATTATTATATTAACTATTTCTTTTATTTTCTAAAAGAGAAGAAAGAAACATTTTGTTTTTTCGTCCACAATTTCTAATCTTTATTTTTTTCGCTTTAGTTTTTGAAAACAAAGTTTAAGAATCTAATCGACTTTCAAGAATGGTAGGAATCTAATTGACCATTCAAATTAATCTATTTATTATTCTCTATTATTAAAATTAAGAAAAGAAAATAAACAACTTTTTTGTAAAAAAAATAAAATAATAAATAGTAAATAAACCTGATGAGTCCGACTCCCCTCCCAGTTTTCTTTTTGTTAATCCAATTGTGATAACAATGTGATACAAATGAGATTTGATAACAGCCGCAGAAGCAAGCATCAACCGAAAATGAAAAGGAGGAGGAAGCCAAAGAGGAATGAGATGGCAATGCCAGAAACATAAACAAAACATTCAGACGAATAAATGATACCCTAAACTTTCTTCCAAAAAGAAAACGTTAGATGGAATAAAAAACAATCCGAGAAGAAAACTCTGTACTATAAAATCTATTGTAAACTCATTTACCAATATTGTAAAAAATGAACAATATATTACTTCTTTCAACACCCCTCTCTCTTCTAATCTATTTCTTCTCAATTTTTATTTTTACAAGTTTATTTATGATTTT TCAAATTTTTCGTTGAAGTTCTGTTTGGCGCCAATTAAAATTAAACAGAGGCGGGAGAACGGAGAATCATCGAGACCTCTCCGTGGTTTTCTAATTGACCTAAGCGCCGCCGCCAACGACGACGACGATCGTCTCTGAATCATTCCCGATCGTACTGTAGTTCGTTGTTTTTCTGCTTTCTTCCGGAGTGAGTTTCGATCAATTCTATCTTGTTTGCGGCTGGTTTATTTTCTGTTTGTCTAGACTGTATTCTGGACATTTCAGAGGTCCCTACAAAATGATAGGAGCACTAATCACCAGAGGACTCACGATGATTTTGGGATATGCCTATCCTGCTTATGAGTGTTACAAAACTGTCGAAACCAGTCAGCCACAGATTGAGCAACTTCATTATTGGTGTCAGTACTGGATTCTGGTGGCCATATTGACGATTCTCGAGAGAATTGGTGATTCTTTTGTTTCATGCAAAGTTGGCATTCTTCGTTTATCTGTGGCATCCAAAAACAAAGGTATGAGGAAGGGAGCGAACCATGTGTATGATTCATTCTTCCGACCATATGTTTCGAAGCACGAGCCTCATATTGACCGCAGCTTGACGGAATTCAAGCTGAAGGCTAGTGATACTGCTTTTATCTACTTTCAAAGAGCTGCCTCCTACTTTCAAACAACATTGTTTGATATATTTGCAAAGTTTGCTCATCAATCGACCACCCCTGCTGCTCCCAAGCCGCAGAAGCAAGCATCAACCGAAAATGAAAAGGAGGAGGAAGCCAAAGAGGAATGAGATGGCAATGCCAGAAACATAAACAAAACATTCAGACGAATAAATGATACCCTAAACTTTCTTCCAAAAAGAAAACGTTAGATGGAATAAAAAACAATCCGAGAAGAAAACTCTGTACTATAAAATCTATTGTAAACTCATTTACCAATATTGTAAAAAATGAACAATATATTACTTCTTTCAACACCCCTCTCTCTTCTAATCTATTTCTTCTCAATTTTTATTTTTACAAGTTTATTTATGATTTT ATGATAGGAGCACTAATCACCAGAGGACTCACGATGATTTTGGGATATGCCTATCCTGCTTATGAGTGTTACAAAACTGTCGAAACCAGTCAGCCACAGATTGAGCAACTTCATTATTGGTGTCAGTACTGGATTCTGGTGGCCATATTGACGATTCTCGAGAGAATTGGTGATTCTTTTGTTTCATGCAAAGTTGGCATTCTTCGTTTATCTGTGGCATCCAAAAACAAAGGTATGAGGAAGGGAGCGAACCATGTGTATGATTCATTCTTCCGACCATATGTTTCGAAGCACGAGCCTCATATTGACCGCAGCTTGACGGAATTCAAGCTGAAGGCTAGTGATACTGCTTTTATCTACTTTCAAAGAGCTGCCTCCTACTTTCAAACAACATTGTTTGATATATTTGCAAAGTTTGCTCATCAATCGACCACCCCTGCTGCTCCCAAGCCGCAGAAGCAAGCATCAACCGAAAATGAAAAGGAGGAGGAAGCCAAAGAGGAATGA MIGALITRGLTMILGYAYPAYECYKTVETSQPQIEQLHYWCQYWILVAILTILERIGDSFVSCKVGILRLSVASKNKGMRKGANHVYDSFFRPYVSKHEPHIDRSLTEFKLKASDTAFIYFQRAASYFQTTLFDIFAKFAHQSTTPAAPKPQKQASTENEKEEEAKEE
BLAST of Carg03999 vs. NCBI nr
Match: XP_022951715.1 (HVA22-like protein i [Cucurbita moschata]) HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73 Identity = 152/175 (86.86%), Postives = 153/175 (87.43%), Query Frame = 0
BLAST of Carg03999 vs. NCBI nr
Match: XP_023537045.1 (HVA22-like protein i [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.1 bits (710), Expect = 2.0e-71 Identity = 148/175 (84.57%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of Carg03999 vs. NCBI nr
Match: XP_023002522.1 (HVA22-like protein i [Cucurbita maxima] >XP_023002524.1 HVA22-like protein i [Cucurbita maxima]) HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70 Identity = 148/175 (84.57%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of Carg03999 vs. NCBI nr
Match: XP_023547201.1 (putative HVA22-like protein g isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 222.6 bits (566), Expect = 9.9e-55 Identity = 123/180 (68.33%), Postives = 140/180 (77.78%), Query Frame = 0
BLAST of Carg03999 vs. NCBI nr
Match: XP_004152654.1 (PREDICTED: HVA22-like protein i isoform X2 [Cucumis sativus] >KGN62669.1 hypothetical protein Csa_2G367230 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53 Identity = 111/146 (76.03%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Carg03999 vs. TAIR10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein) HSP 1 Score: 162.5 bits (410), Expect = 2.2e-40 Identity = 86/161 (53.42%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of Carg03999 vs. TAIR10
Match: AT1G75700.1 (HVA22-like protein G) HSP 1 Score: 154.5 bits (389), Expect = 6.0e-38 Identity = 80/165 (48.48%), Postives = 107/165 (64.85%), Query Frame = 0
BLAST of Carg03999 vs. TAIR10
Match: AT1G19950.1 (HVA22-like protein H (ATHVA22H)) HSP 1 Score: 152.1 bits (383), Expect = 3.0e-37 Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0
BLAST of Carg03999 vs. TAIR10
Match: AT2G36020.1 (HVA22-like protein J) HSP 1 Score: 115.2 bits (287), Expect = 4.0e-26 Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of Carg03999 vs. Swiss-Prot
Match: sp|Q8LE10|HA22I_ARATH (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-39 Identity = 86/161 (53.42%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of Carg03999 vs. Swiss-Prot
Match: sp|Q9LR09|HA22G_ARATH (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36 Identity = 80/165 (48.48%), Postives = 107/165 (64.85%), Query Frame = 0
BLAST of Carg03999 vs. Swiss-Prot
Match: sp|Q8LEM6|HA22H_ARATH (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 152.1 bits (383), Expect = 5.3e-36 Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0
BLAST of Carg03999 vs. Swiss-Prot
Match: sp|Q8GXE9|HA22J_ARATH (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 7.2e-25 Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of Carg03999 vs. Swiss-Prot
Match: sp|Q6NUK4|REEP3_HUMAN (Receptor expression-enhancing protein 3 OS=Homo sapiens OX=9606 GN=REEP3 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09 Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 0
BLAST of Carg03999 vs. TrEMBL
Match: tr|A0A0A0LNS0|A0A0A0LNS0_CUCSA (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G367230 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53 Identity = 111/146 (76.03%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Carg03999 vs. TrEMBL
Match: tr|A0A1S3BB63|A0A1S3BB63_CUCME (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103488035 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.0e-52 Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0
BLAST of Carg03999 vs. TrEMBL
Match: tr|A0A1S3BB64|A0A1S3BB64_CUCME (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103488035 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.0e-52 Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 0
BLAST of Carg03999 vs. TrEMBL
Match: tr|A0A2K2BC96|A0A2K2BC96_POPTR (HVA22-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G023500v3 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 89/158 (56.33%), Postives = 113/158 (71.52%), Query Frame = 0
BLAST of Carg03999 vs. TrEMBL
Match: tr|A0A1U7ZAB2|A0A1U7ZAB2_NELNU (HVA22-like protein OS=Nelumbo nucifera OX=4432 GN=LOC104588010 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40 Identity = 83/151 (54.97%), Postives = 110/151 (72.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |