Carg03972 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03972
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Thioredoxin
Location	Cucurbita_argyrosperma_scaffold_011 : 1118159 .. 1119819 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATCTTCTTGATAACTCCATAGCCATCCCCTGCAATTCAGAGCAGAGCAGAGCAGAAACAGAGCCTCCCCTGTTCTATTCCCTTTCTCCGCCGCACTCCGATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGGTAAAATTCTGTAATTAATTTATAATTTATTTGGTTTTTAAATATCTAAATTTTATTGAATTTAATAAAATTATTATATTAATTAACTTTTAAGATATGCTAAATTCTAAATAAAAAATTATTAAAAATGACGCGAGATAACGTAACGGTGATTAGAATACGTGCATGGATGAAGTTTAGAGATGAGTTTAGGTTTAAAAGTAAAACGCTTCCTACGTTCTAAAATCACTTAAGAAAGTATCGTTTTTCGCCTCCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGAGTTTGAGGGTTTGGAAGTTTAGTTTCTAATTAATGGTGGGATTTTGGTGCATGACGGGTCACTGTTATATACTGTGATGAGTTGTTTATTATGGTTTAAATTTGGTGTCACTTTGAAATATGATTCAAGTTGTGACAGGTCACCATTATATATATAACCTCGACTAAAATGTCATAGATTTTGAATCTTTCCACTAGAGAAAAACATTTCATACCCTAATCCCTAAACCTCGAGATAAAAAACCTTAAAAAGGGATGTCGTAACTTGTAATGTTCATAACGTTCATAGCGCCTAATTTGAATTCACTCAAGGGAGTCCCAATTTACTGCAATCATGTCTTTCAAATATATTTCCAATTGAATGATGATGAATATTCAACTACATTCCTATGGATTAATAGCAAT

mRNA sequence

TAAGATCTTCTTGATAACTCCATAGCCATCCCCTGCAATTCAGAGCAGAGCAGAGCAGAAACAGAGCCTCCCCTGTTCTATTCCCTTTCTCCGCCGCACTCCGATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGAGTTTGAGGGTTTGGAAGTTTAGTTTCTAATTAATGGTGGGATTTTGGTGCATGACGGGTCACTGTTATATACTGTGATGAGTTGTTTATTATGGTTTAAATTTGGTGTCACTTTGAAATATGATTCAAGTTGTGACAGGTCACCATTATATATATAACCTCGACTAAAATGTCATAGATTTTGAATCTTTCCACTAGAGAAAAACATTTCATACCCTAATCCCTAAACCTCGAGATAAAAAACCTTAAAAAGGGATGTCGTAACTTGTAATGTTCATAACGTTCATAGCGCCTAATTTGAATTCACTCAAGGGAGTCCCAATTTACTGCAATCATGTCTTTCAAATATATTTCCAATTGAATGATGATGAATATTCAACTACATTCCTATGGATTAATAGCAAT

Coding sequence (CDS)

ATGGCTTCCTTCTCCCACTCTCTCACCACACCTCCACCCTCTCTCTCTCTCCACACCCACAACAACCGCCTCCTCTCCGCCGCTTCCCTCCTCCCCAATCTCATCAAACCCACCGCCTTCGCTGCAAATTTACACCTCTCCCACCGCCGCCGCGGCTTCACAATCAAAGCCACCGCTGCTCCGAGCGTGAAGAAACCCACCGGCGATGAGCGAGTCCAGCAAGTCCACAGCGCGGAGGAGTTCGATGAAGCCCTTAAGAAAGCCAAAAGCAAGCTGGTTGTGGTGGAATTCGCCGCCTCACACAGCGCGCAGAGCAGCCGGATGTACCCGTTCATGGTGACACTCAGCAAAACGTGTAACGATGTGGAGTTCATTTTGGTGATGGGCGATGAATCGGAGCAAACCAAAGAGCTCTGTAACAGAGAGAAAATCGAAAAGGTTCCTCACTTCAGCTTCTACAAGAACATGGAGAAGATCCACGAGGAGGAAGGGATCGGGCCGGATCAGCTGGAGGGCGACGTATTATACTACGGCGACAGCCATTCAGGAGTTGTTCAGCTACACAGCAGGGAGGATGTGGAGAAACTGATACAAGACCACAAGGAGGATCACAAGCTGATTGTACTGGACGTGGGGTTGAAGCATTGTGGACCTTGCGTGAAAGTCTATCCCACAGTGATCAAGTTGTCGAAGAAAATGGACACGGCGGTGTTCGCTAGAATGAACGGCGATGAGAACGAGAGCTGTATGCAGTTTTTGAAAGACATGGACGTTGTCGAAGTGCCTACGTTTTTGTTCATAAGAGATGGAGAGATTAAAGGGAGGTACGTCGGGTCGGGTAAAGGAGAGCTTATTGGTGAGATTCTTAGATATCAAGGAGTTCGTGTTACTTATTGA

Protein sequence

MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY

Homology

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BLAST of Carg03972 vs. NCBI nr
Match: XP_022951937.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita moschata])

HSP 1 Score: 590.9 bits (1522), Expect = 2.4e-165
Identity = 296/298 (99.33%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAF++NLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFSSNLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]

BLAST of Carg03972 vs. NCBI nr
Match: XP_023538539.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.3 bits (1518), Expect = 7.1e-165
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLS ASLLPNLIKPTAF+ANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSGASLLPNLIKPTAFSANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGD+
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDN 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]

BLAST of Carg03972 vs. NCBI nr
Match: XP_023002451.1 (thioredoxin-like protein CDSP32, chloroplastic [Cucurbita maxima])

HSP 1 Score: 585.1 bits (1507), Expect = 1.3e-163
Identity = 292/298 (97.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAANLHLSHRRRGFTIKATAA 60
           MASFSHSLTTPPPSLSLHTHNNRLLSA SL+PNLIKP AF+ANLHLSHRRRGFTIKATAA
Sbjct: 1   MASFSHSLTTPPPSLSLHTHNNRLLSATSLIPNLIKPAAFSANLHLSHRRRGFTIKATAA 60

Query: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120
           PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN
Sbjct: 61  PSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCN 120

Query: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDS 180
           DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGD+
Sbjct: 121 DVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDN 180

Query: 181 HSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240
           HSGVVQLHSREDVEKLIQ+HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR
Sbjct: 181 HSGVVQLHSREDVEKLIQEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFAR 240

Query: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 MNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 298

[Close]

BLAST of Carg03972 vs. NCBI nr
Match: XP_008445316.1 (PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 246/305 (80.66%), Postives = 267/305 (87.54%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAAN---LHL----SHRRRGF 60
           MASFSHSLTTPPP  SL+THN R     SL+PNLIK  A AA+   L L       RR  
Sbjct: 1   MASFSHSLTTPPP--SLYTHNPR----PSLIPNLIKLPAAAASSPPLRLITAPRRARRAL 60

Query: 61  TIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMV 120
            I ATA+PSVKK + DERV +VHS EEFDEALKKAKSKLVVVE+AAS S QSS+MYPFMV
Sbjct: 61  QIHATASPSVKKQSSDERVLKVHSKEEFDEALKKAKSKLVVVEYAASDSEQSSQMYPFMV 120

Query: 121 TLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGD 180
           +LS++C+DVEFILVMGDESE+TKEL +REKIEKVPHFSFYKNMEKIHEEEGIGPD+LEGD
Sbjct: 121 SLSRSCSDVEFILVMGDESEKTKELFDREKIEKVPHFSFYKNMEKIHEEEGIGPDRLEGD 180

Query: 181 VLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240
           VLYYGD+HS VVQLHS EDVEKLI +HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM
Sbjct: 181 VLYYGDNHSAVVQLHSGEDVEKLIGEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240

Query: 241 DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQG 299
           +T VFARMNGDEN SCM+FLKDM+VVEVPTFLFIRDGEIKGRYVGSG+GELIGEILRYQG
Sbjct: 241 ETVVFARMNGDENASCMKFLKDMNVVEVPTFLFIRDGEIKGRYVGSGRGELIGEILRYQG 299

[Close]

BLAST of Carg03972 vs. NCBI nr
Match: XP_004142992.1 (PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126
Identity = 240/303 (79.21%), Postives = 266/303 (87.79%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAA----NLHLSHR-RRGFTI 60
           MASFSHSL TPPP  SL+THN R     SL+PNLIK  A ++     +  + R RR   I
Sbjct: 1   MASFSHSLATPPP--SLYTHNPR----PSLIPNLIKLPAASSLPPQRITTTRRARRALQI 60

Query: 61  KATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTL 120
            A A+PSVKK + DERV +VHS EEFDEALKKAK KLVVVE+AAS S QSS+MYPFMV+L
Sbjct: 61  HAAASPSVKKQSSDERVLKVHSKEEFDEALKKAKGKLVVVEYAASDSEQSSQMYPFMVSL 120

Query: 121 SKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVL 180
           S++C+DVEFILVMGDESE+TKELC+REKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVL
Sbjct: 121 SRSCSDVEFILVMGDESEKTKELCDREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVL 180

Query: 181 YYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDT 240
           YYGD+HS VVQLHS EDVEKLI +HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLS+KM+T
Sbjct: 181 YYGDNHSAVVQLHSGEDVEKLIGEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSRKMET 240

Query: 241 AVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVR 299
            VFARMNGDEN+SCM+FLK+M+VVEVPTFLFIRDGEIKGRYVGSG+GELIGEILRYQGVR
Sbjct: 241 VVFARMNGDENQSCMKFLKEMNVVEVPTFLFIRDGEIKGRYVGSGRGELIGEILRYQGVR 297

[Close]

BLAST of Carg03972 vs. TAIR10
Match: AT1G76080.1 (chloroplastic drought-induced stress protein of 32 kD)

HSP 1 Score: 381.3 bits (978), Expect = 5.3e-106
Identity = 191/248 (77.02%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 55  IKATAAPSVK---KPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPF 114
           IKA AA   K    P  DE+VQ++HS EEFD ALK AKSKLVV EFA S S QS+++YPF
Sbjct: 55  IKAGAASPGKVGTPPANDEKVQKIHSGEEFDVALKNAKSKLVVAEFATSKSDQSNKIYPF 114

Query: 115 MVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLE 174
           MV LS+TCNDV F+LVMGDES++T+ELC REKIEKVPHFSFYK+MEKIHEEEGI PDQL 
Sbjct: 115 MVELSRTCNDVVFLLVMGDESDKTRELCRREKIEKVPHFSFYKSMEKIHEEEGIEPDQLM 174

Query: 175 GDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSK 234
           GDVLYYGD+HS VVQLH R DVEKLI +++   KLIVLDVGLKHCGPCVKVYPTV+KLS+
Sbjct: 175 GDVLYYGDNHSAVVQLHGRPDVEKLIDENRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSR 234

Query: 235 KM-DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILR 294
            M +T VFARMNGDEN+SCM+FLKDM+V+EVPTFLFIRDGEI+GRYVGSGKGELIGEILR
Sbjct: 235 SMSETVVFARMNGDENDSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGSGKGELIGEILR 294

Query: 295 YQGVRVTY 299
           Y GVRVTY
Sbjct: 295 YSGVRVTY 302

[Close]

BLAST of Carg03972 vs. TAIR10
Match: AT1G45145.1 (thioredoxin H-type 5)

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-12
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ E   + ++D  E  KLIV+D     C PC  + P   +++KK    VF +++ 
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
           DE ++  Q  K   V  +PTF+F+++G I  R VG+ K E+  +++++ G+
Sbjct: 67  DELQAVAQEFK---VEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGL 114

[Close]

BLAST of Carg03972 vs. TAIR10
Match: AT1G19730.1 (Thioredoxin superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKK-MDTAVFARMN 243
           V+  H+ +     +   KE +KLIV+D     C PC  + P    L+KK M +A+F +++
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 244 GDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
            DE +S     K+  V  +PTF+FI+ GE+  + VG+ K +L  +I+++ GV
Sbjct: 68  VDELQS---VAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGV 116

[Close]

BLAST of Carg03972 vs. TAIR10
Match: AT5G42980.1 (thioredoxin 3)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ ED  + ++   E  KLIV+D     C PC  + P    L+KK    VF +++ 
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
           DE  +  +  K   V  +PTF+F+++GEIK   VG+ K E+I  + +++ V
Sbjct: 67  DELNTVAEEFK---VQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

[Close]

BLAST of Carg03972 vs. TAIR10
Match: AT3G51030.1 (thioredoxin H-type 1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 33/108 (30.56%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ E   + +Q   E   L+V+D     CGPC  + P    L+KK+   +F +++ 
Sbjct: 8   VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDT 67

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRY 292
           DE +S      D  +  +PTF+F+++G+I  + VG+ K EL   I ++
Sbjct: 68  DELKS---VASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Carg03972 vs. Swiss-Prot
Match: sp|Q9SGS4|CDSP_ARATH (Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDSP32 PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 9.6e-105
Identity = 191/248 (77.02%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 55  IKATAAPSVK---KPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPF 114
           IKA AA   K    P  DE+VQ++HS EEFD ALK AKSKLVV EFA S S QS+++YPF
Sbjct: 55  IKAGAASPGKVGTPPANDEKVQKIHSGEEFDVALKNAKSKLVVAEFATSKSDQSNKIYPF 114

Query: 115 MVTLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLE 174
           MV LS+TCNDV F+LVMGDES++T+ELC REKIEKVPHFSFYK+MEKIHEEEGI PDQL 
Sbjct: 115 MVELSRTCNDVVFLLVMGDESDKTRELCRREKIEKVPHFSFYKSMEKIHEEEGIEPDQLM 174

Query: 175 GDVLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSK 234
           GDVLYYGD+HS VVQLH R DVEKLI +++   KLIVLDVGLKHCGPCVKVYPTV+KLS+
Sbjct: 175 GDVLYYGDNHSAVVQLHGRPDVEKLIDENRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSR 234

Query: 235 KM-DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILR 294
            M +T VFARMNGDEN+SCM+FLKDM+V+EVPTFLFIRDGEI+GRYVGSGKGELIGEILR
Sbjct: 235 SMSETVVFARMNGDENDSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGSGKGELIGEILR 294

Query: 295 YQGVRVTY 299
           Y GVRVTY
Sbjct: 295 YSGVRVTY 302

[Close]

BLAST of Carg03972 vs. Swiss-Prot
Match: sp|Q84NN4|CDSP_ORYSJ (Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CDSP32 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-96
Identity = 175/226 (77.43%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 74  QVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKTCNDVEFILVMGDESE 133
           QVHSAEE D AL+ AK +LVVVEFAASHS  SSR+YP MV LS+TC DV+F+LVMGDES+
Sbjct: 76  QVHSAEELDGALRAAKERLVVVEFAASHSVNSSRIYPCMVELSRTCGDVDFLLVMGDESD 135

Query: 134 QTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYGDSHSGVVQLHSREDV 193
            T+ELC RE I  VPHF+FYK  EK+HEEEGIGPDQL GDVLYYGD HS VVQLHSR DV
Sbjct: 136 ATRELCRREGITAVPHFTFYKGAEKVHEEEGIGPDQLAGDVLYYGDHHSAVVQLHSRADV 195

Query: 194 EKLIQDHK-EDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM-DTAVFARMNGDENESCMQ 253
           E LI DH+ E  KL+VLDVGLK CGPCVKVYPTV+KLS+ M DT VFARMNGDEN+SCM+
Sbjct: 196 ESLISDHRGEGGKLVVLDVGLKRCGPCVKVYPTVVKLSRTMADTTVFARMNGDENDSCME 255

Query: 254 FLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVT 298
           FL+DMDVVEVPTFLFIRDG+I GRYVGSG+GELIGEILRY GV+VT
Sbjct: 256 FLRDMDVVEVPTFLFIRDGDIVGRYVGSGRGELIGEILRYNGVKVT 301

[Close]

BLAST of Carg03972 vs. Swiss-Prot
Match: sp|Q39241|TRXH5_ARATH (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+  H+ E   + ++D  E  KLIV+D     C PC  + P   +++KK    VF +++ 
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
           DE ++  Q  K   V  +PTF+F+++G I  R VG+ K E+  +++++ G+
Sbjct: 67  DELQAVAQEFK---VEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGL 114

[Close]

BLAST of Carg03972 vs. Swiss-Prot
Match: sp|Q39239|TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKK-MDTAVFARMN 243
           V+  H+ +     +   KE +KLIV+D     C PC  + P    L+KK M +A+F +++
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 244 GDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGV 295
            DE +S     K+  V  +PTF+FI+ GE+  + VG+ K +L  +I+++ GV
Sbjct: 68  VDELQS---VAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGV 116

[Close]

BLAST of Carg03972 vs. Swiss-Prot
Match: sp|O64394|TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 184 VVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVFARMNG 243
           V+ +HS E     I++     KL+V+D     CGPC  + P    L+KK   AVF +++ 
Sbjct: 20  VISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDV 79

Query: 244 DENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEI 289
           DE        +   V  +PTFLF+++G++K R VG+ K EL  ++
Sbjct: 80  DE---LKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKV 121

[Close]

BLAST of Carg03972 vs. TrEMBL
Match: tr|A0A1S3BD95|A0A1S3BD95_CUCME (thioredoxin-like protein CDSP32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488385 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 7.8e-128
Identity = 246/305 (80.66%), Postives = 267/305 (87.54%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLHTHNNRLLSAASLLPNLIKPTAFAAN---LHL----SHRRRGF 60
           MASFSHSLTTPPP  SL+THN R     SL+PNLIK  A AA+   L L       RR  
Sbjct: 1   MASFSHSLTTPPP--SLYTHNPR----PSLIPNLIKLPAAAASSPPLRLITAPRRARRAL 60

Query: 61  TIKATAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMV 120
            I ATA+PSVKK + DERV +VHS EEFDEALKKAKSKLVVVE+AAS S QSS+MYPFMV
Sbjct: 61  QIHATASPSVKKQSSDERVLKVHSKEEFDEALKKAKSKLVVVEYAASDSEQSSQMYPFMV 120

Query: 121 TLSKTCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGD 180
           +LS++C+DVEFILVMGDESE+TKEL +REKIEKVPHFSFYKNMEKIHEEEGIGPD+LEGD
Sbjct: 121 SLSRSCSDVEFILVMGDESEKTKELFDREKIEKVPHFSFYKNMEKIHEEEGIGPDRLEGD 180

Query: 181 VLYYGDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240
           VLYYGD+HS VVQLHS EDVEKLI +HKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM
Sbjct: 181 VLYYGDNHSAVVQLHSGEDVEKLIGEHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKM 240

Query: 241 DTAVFARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQG 299
           +T VFARMNGDEN SCM+FLKDM+VVEVPTFLFIRDGEIKGRYVGSG+GELIGEILRYQG
Sbjct: 241 ETVVFARMNGDENASCMKFLKDMNVVEVPTFLFIRDGEIKGRYVGSGRGELIGEILRYQG 299

[Close]

BLAST of Carg03972 vs. TrEMBL
Match: tr|A0A1R3HYN5|A0A1R3HYN5_9ROSI (Thioredoxin OS=Corchorus olitorius OX=93759 GN=COLO4_26082 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.4e-121
Identity = 230/300 (76.67%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1   MASFSHSLTTPPPS-LSLHTHNNRLLSAASLLPNLI-KPTAFAANLHLSHRRRGFTIKAT 60
           MA+ ++ L+ PP S LS       +   AS LP+ + KP  F+  L  S   R F  KAT
Sbjct: 1   MATITNFLSKPPASDLSSIPKITSISPHASFLPSFVTKPRPFSTKLESSRSSR-FITKAT 60

Query: 61  AAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSKT 120
           AAP  KK   DERV+QVHS EEFDEALK AK+KLVVVE+AASHS QSS++YPFMV LS+T
Sbjct: 61  AAPKTKKAPSDERVKQVHSIEEFDEALKSAKNKLVVVEYAASHSKQSSKIYPFMVELSRT 120

Query: 121 CNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYYG 180
           CNDVEF+LVMGDESEQT+ELC REKIE+VPHFSFYK+ME IHEEEGIGPDQL GDVLYYG
Sbjct: 121 CNDVEFLLVMGDESEQTRELCKREKIEQVPHFSFYKSMELIHEEEGIGPDQLMGDVLYYG 180

Query: 181 DSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAVF 240
           D+HS VVQLH REDVEKLI+DHK DHKLIVLDVGLKHCGPCVKVYPTVIKLS++MDTAVF
Sbjct: 181 DNHSAVVQLHCREDVEKLIEDHKADHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMDTAVF 240

Query: 241 ARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVTY 299
           ARMNGDEN+SCMQFLKDMDV+EVPTFLFIRDGEI GRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 241 ARMNGDENDSCMQFLKDMDVIEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVTY 299

[Close]

BLAST of Carg03972 vs. TrEMBL
Match: tr|A0A1U8JBM8|A0A1U8JBM8_GOSHI (thioredoxin-like protein CDSP32, chloroplastic OS=Gossypium hirsutum OX=3635 GN=LOC107905550 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 7.1e-121
Identity = 230/301 (76.41%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLH--THNNRLLSAASLLPNL-IKPTAFAANLHLSHRRRGFTIKA 60
           MA+ ++ LT PPPS  LH       L S AS LP+L  +P +F+  L  S   R F  KA
Sbjct: 1   MAAITNFLTKPPPSDLLHFTPKLTSLGSHASFLPSLATRPRSFSTKLGTSTSSR-FITKA 60

Query: 61  TAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSK 120
           TAAP  K    DERVQ+VHS EEFDEAL+KAK++LVVVE+A S S  SS++YPFMV LS+
Sbjct: 61  TAAPGTKDAPSDERVQKVHSIEEFDEALRKAKNRLVVVEYATSFSYHSSKIYPFMVDLSR 120

Query: 121 TCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYY 180
           TCNDVEFILVMGDES++T+ELC REKI KVPHFSFYK+MEKIHEEEGIGPDQL GDVLYY
Sbjct: 121 TCNDVEFILVMGDESDETRELCKREKITKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYY 180

Query: 181 GDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAV 240
           GDSHSGVVQLHSREDVEKLI+DHK DHKL+VLDVGLKHCGPCVKVYPTVIKLS++MD+ V
Sbjct: 181 GDSHSGVVQLHSREDVEKLIEDHKLDHKLVVLDVGLKHCGPCVKVYPTVIKLSRQMDSVV 240

Query: 241 FARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVT 299
           FARMNGDEN+SCMQFLKDMDVVEVPTFLFIRDGEI GRYVGSGKGELIGEILRYQGVRVT
Sbjct: 241 FARMNGDENDSCMQFLKDMDVVEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVT 300

[Close]

BLAST of Carg03972 vs. TrEMBL
Match: tr|A0A0D2QJ16|A0A0D2QJ16_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G191100 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 7.1e-121
Identity = 230/301 (76.41%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLH--THNNRLLSAASLLPNL-IKPTAFAANLHLSHRRRGFTIKA 60
           MA+ ++ LT PPPS  LH       L S AS LP+L  +P +F+  L  S   R F  KA
Sbjct: 1   MAAITNFLTKPPPSDLLHFTPKLTSLGSHASFLPSLATRPRSFSTKLGTSTSSR-FITKA 60

Query: 61  TAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSK 120
           TAAP  K    DERVQ+VHS EEFDEAL+KAK++LVVVE+A S S  SS++YPFMV LS+
Sbjct: 61  TAAPGTKDAPSDERVQKVHSIEEFDEALRKAKNRLVVVEYATSFSYHSSKIYPFMVDLSR 120

Query: 121 TCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYY 180
           TCNDVEFILVMGDES++T+ELC REKI KVPHFSFYK+MEKIHEEEGIGPDQL GDVLYY
Sbjct: 121 TCNDVEFILVMGDESDETRELCKREKITKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYY 180

Query: 181 GDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAV 240
           GDSHSGVVQLHSREDVEKLI+DHK DHKL+VLDVGLKHCGPCVKVYPTVIKLS++MD+ V
Sbjct: 181 GDSHSGVVQLHSREDVEKLIEDHKLDHKLVVLDVGLKHCGPCVKVYPTVIKLSRQMDSVV 240

Query: 241 FARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVT 299
           FARMNGDEN+SCMQFLKDMDVVEVPTFLFIRDGEI GRYVGSGKGELIGEILRYQGVRVT
Sbjct: 241 FARMNGDENDSCMQFLKDMDVVEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVT 300

[Close]

BLAST of Carg03972 vs. TrEMBL
Match: tr|A0A2P5RGQ9|A0A2P5RGQ9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17089 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 7.1e-121
Identity = 230/301 (76.41%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 1   MASFSHSLTTPPPSLSLH--THNNRLLSAASLLPNL-IKPTAFAANLHLSHRRRGFTIKA 60
           MA+ ++ LT PPPS  LH       L S AS LP+L  +P +F+  L  S   R F  KA
Sbjct: 1   MAAITNFLTKPPPSDLLHFTPKLTSLGSHASFLPSLATRPRSFSTKLGTSTSSR-FITKA 60

Query: 61  TAAPSVKKPTGDERVQQVHSAEEFDEALKKAKSKLVVVEFAASHSAQSSRMYPFMVTLSK 120
           TAAP  K    DERVQ+VHS EEFDEAL+KAK++LVVVE+A S S  SS++YPFMV LS+
Sbjct: 61  TAAPGTKDAPSDERVQKVHSIEEFDEALRKAKNRLVVVEYATSFSYHSSKIYPFMVDLSR 120

Query: 121 TCNDVEFILVMGDESEQTKELCNREKIEKVPHFSFYKNMEKIHEEEGIGPDQLEGDVLYY 180
           TCNDVEFILVMGDES++T+ELC REKI KVPHFSFYK+MEKIHEEEGIGPDQL GDVLYY
Sbjct: 121 TCNDVEFILVMGDESDETRELCKREKITKVPHFSFYKSMEKIHEEEGIGPDQLMGDVLYY 180

Query: 181 GDSHSGVVQLHSREDVEKLIQDHKEDHKLIVLDVGLKHCGPCVKVYPTVIKLSKKMDTAV 240
           GDSHSGVVQLHSREDVEKLI+DHK DHKL+VLDVGLKHCGPCVKVYPTVIKLS++MD+ V
Sbjct: 181 GDSHSGVVQLHSREDVEKLIEDHKLDHKLVVLDVGLKHCGPCVKVYPTVIKLSRQMDSVV 240

Query: 241 FARMNGDENESCMQFLKDMDVVEVPTFLFIRDGEIKGRYVGSGKGELIGEILRYQGVRVT 299
           FARMNGDEN+SCMQFLKDMDVVEVPTFLFIRDGEI GRYVGSGKGELIGEILRYQGVRVT
Sbjct: 241 FARMNGDENDSCMQFLKDMDVVEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVT 300

The following BLAST results are available for this feature:

BLAST of Carg03972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951937.1	2.4e-165	99.33	thioredoxin-like protein CDSP32, chloroplastic [Cucurbita moschata]	[more]
XP_023538539.1	7.1e-165	98.99	thioredoxin-like protein CDSP32, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023002451.1	1.3e-163	97.99	thioredoxin-like protein CDSP32, chloroplastic [Cucurbita maxima]	[more]
XP_008445316.1	1.2e-127	80.66	PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Cucumis melo]	[more]
XP_004142992.1	1.3e-126	79.21	PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Cucumis sativus]	[more]

BLAST of Carg03972 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76080.1	5.3e-106	77.02	chloroplastic drought-induced stress protein of 32 kD	[more]
AT1G45145.1	5.9e-12	31.53	thioredoxin H-type 5	[more]
AT1G19730.1	1.7e-11	33.93	Thioredoxin superfamily protein	[more]
AT5G42980.1	3.8e-11	33.33	thioredoxin 3	[more]
AT3G51030.1	1.9e-10	30.56	thioredoxin H-type 1	[more]

BLAST of Carg03972 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SGS4\|CDSP_ARATH	9.6e-105	77.02	Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q84NN4\|CDSP_ORYSJ	2.1e-96	77.43	Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica O...	[more]
sp\|Q39241\|TRXH5_ARATH	1.1e-10	31.53	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
sp\|Q39239\|TRXH4_ARATH	3.1e-10	33.93	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=3 SV=2	[more]
sp\|O64394\|TRXH_WHEAT	3.1e-10	34.29	Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3	[more]

BLAST of Carg03972 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BD95\|A0A1S3BD95_CUCME	7.8e-128	80.66	thioredoxin-like protein CDSP32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1R3HYN5\|A0A1R3HYN5_9ROSI	1.4e-121	76.67	Thioredoxin OS=Corchorus olitorius OX=93759 GN=COLO4_26082 PE=4 SV=1	[more]
tr\|A0A1U8JBM8\|A0A1U8JBM8_GOSHI	7.1e-121	76.41	thioredoxin-like protein CDSP32, chloroplastic OS=Gossypium hirsutum OX=3635 GN=...	[more]
tr\|A0A0D2QJ16\|A0A0D2QJ16_GOSRA	7.1e-121	76.41	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G191100 PE=4 ...	[more]
tr\|A0A2P5RGQ9\|A0A2P5RGQ9_GOSBA	7.1e-121	76.41	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD17089 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR005746	Thioredoxin
IPR013766	Thioredoxin_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03972-RA	Carg03972-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 75..165 e-value: 1.5E-9 score: 37.6 coord: 194..284 e-value: 5.2E-10 score: 39.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 54..202 score: 10.721
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 180..292 e-value: 5.1E-19 score: 70.1
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 62..179 e-value: 3.3E-17 score: 64.3
None	No IPR available	PANTHER	PTHR10438:SF247	THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC	coord: 73..298
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 73..298
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 178..285
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 64..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03972	Cla022397	Watermelon (97103) v1	carwmB0978
Carg03972	Csa2G346600	Cucumber (Chinese Long) v2	carcuB0991
Carg03972	MELO3C011340	Melon (DHL92) v3.5.1	carmeB0955
Carg03972	ClCG08G014020	Watermelon (Charleston Gray)	carwcgB0958
Carg03972	CSPI02G16850	Wild cucumber (PI 183967)	carcpiB1013
Carg03972	Cucsa.394020	Cucumber (Gy14) v1	carcgyB1101
Carg03972	CmaCh12G003870	Cucurbita maxima (Rimu)	carcmaB1349
Carg03972	CmoCh12G003380	Cucurbita moschata (Rifu)	carcmoB1310
Carg03972	Lsi08G012940	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03972	Cp4.1LG07g03290	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03972	CsGy2G016820	Cucumber (Gy14) v2	carcgybB0964
Carg03972	MELO3C011340.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03972	CsaV3_2G024440	Cucumber (Chinese Long) v3	carcucB1019
Carg03972	Cla97C08G157590	Watermelon (97103) v2	carwmbB1034
Carg03972	Bhi04G000091	Wax gourd	carwgoB1142

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03972	Silver-seed gourd	carcarB168
Carg03972	Cucurbita maxima (Rimu)	carcmaB1357
Carg03972	Cucurbita moschata (Rifu)	carcmoB1319
Carg03972	Cucurbita pepo (Zucchini)	carcpeB1352