Carg03931 (gene) Silver-seed gourd

NameCarg03931
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_011 : 853270 .. 853890 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGACCAAACTTCAGGATGGGATGACTTGAAACATAAGTATCGTTATAGACATAAAACATATGTACCTCGTTTAAAATATTTTAATTTTTAAAAGTTACATTAGTACCCTTAATACTATAGTTCATATTTATAAGCAAGTCGTCTATTTTCAACTCTACACTATCTTAATTTTGACACGCTCACTCACGACAGGTCTTGAAAAAGCTCGATCTAAAAAAAACATTGGGTTTGTTTGTCCCGAATTATCCTTAAAAAGACCAAAAAAAAAAAAAAAAAAAAAAAAAAACATAATTTTGTGTATATATTTTCATCAATCTTTAAAGATGACGTCGCTGGATATGTTCATCAACGGCTGGAGCGTATCGGCGGAGAATTTCCTAGCAAAGAGGAACGTATGCCGGCGGTAATGTTTAGCGGCGGAGGAAGACGACGAACTACGGCGGCCGGAGGTTTTAGTTCTCGTTCTGATTCTCATTTCAATGCCGCCGGCGCCGTCGCCGTCGCCGTATCTGAGGCGGGACATTCTCAGAGAACGTATGAGATTGGGTGTGACGTCAGATTTGTCGTACGTGCGAGGGTGGCCATCGAAACTCCCATTCCAGTCCACGTGTGTTAG

mRNA sequence

ATGGTGGACCAAACTTCAGGATGGGATGACTTGAAACATAAGTATCATGACGTCGCTGGATATGTTCATCAACGGCTGGAGCGTATCGGCGGAGAATTTCCTAGCAAAGAGGAACGTATGCCGGCGGTAATGTTTAGCGGCGGAGGAAGACGACGAACTACGGCGGCCGGAGGTTTTAGTTCTCGTTCTGATTCTCATTTCAATGCCGCCGGCGCCGTCGCCGTCGCCGTATCTGAGGCGGGACATTCTCAGAGAACGTATGAGATTGGGTGTGACGTCAGATTTGTCGTACGTGCGAGGGTGGCCATCGAAACTCCCATTCCAGTCCACGTGTGTTAG

Coding sequence (CDS)

ATGGTGGACCAAACTTCAGGATGGGATGACTTGAAACATAAGTATCATGACGTCGCTGGATATGTTCATCAACGGCTGGAGCGTATCGGCGGAGAATTTCCTAGCAAAGAGGAACGTATGCCGGCGGTAATGTTTAGCGGCGGAGGAAGACGACGAACTACGGCGGCCGGAGGTTTTAGTTCTCGTTCTGATTCTCATTTCAATGCCGCCGGCGCCGTCGCCGTCGCCGTATCTGAGGCGGGACATTCTCAGAGAACGTATGAGATTGGGTGTGACGTCAGATTTGTCGTACGTGCGAGGGTGGCCATCGAAACTCCCATTCCAGTCCACGTGTGTTAG

Protein sequence

MVDQTSGWDDLKHKYHDVAGYVHQRLERIGGEFPSKEERMPAVMFSGGGRRRTTAAGGFSSRSDSHFNAAGAVAVAVSEAGHSQRTYEIGCDVRFVVRARVAIETPIPVHVC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03931-RACarg03931-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..61

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg03931Watermelon (97103) v2carwmbB1033
Carg03931Watermelon (97103) v2carwmbB1034
Carg03931Wax gourdcarwgoB1145
Carg03931Silver-seed gourdcarcarB168
Carg03931Silver-seed gourdcarcarB239
Carg03931Silver-seed gourdcarcarB558
Carg03931Silver-seed gourdcarcarB572
Carg03931Cucumber (Gy14) v2carcgybB0960
Carg03931Cucumber (Gy14) v1carcgyB1091
Carg03931Cucurbita maxima (Rimu)carcmaB1349
Carg03931Cucurbita maxima (Rimu)carcmaB1353
Carg03931Cucurbita maxima (Rimu)carcmaB1357
Carg03931Cucurbita moschata (Rifu)carcmoB1310
Carg03931Cucurbita moschata (Rifu)carcmoB1313
Carg03931Cucurbita moschata (Rifu)carcmoB1315
Carg03931Cucurbita moschata (Rifu)carcmoB1319
Carg03931Cucurbita pepo (Zucchini)carcpeB1352
Carg03931Cucurbita pepo (Zucchini)carcpeB1356
Carg03931Cucurbita pepo (Zucchini)carcpeB1363
Carg03931Cucurbita pepo (Zucchini)carcpeB1364
Carg03931Cucurbita pepo (Zucchini)carcpeB1368
Carg03931Wild cucumber (PI 183967)carcpiB1010
Carg03931Cucumber (Chinese Long) v2carcuB0987
Carg03931Cucumber (Chinese Long) v3carcucB1015
Carg03931Bottle gourd (USVL1VR-Ls)carlsiB893
Carg03931Bottle gourd (USVL1VR-Ls)carlsiB898
Carg03931Melon (DHL92) v3.5.1carmeB0955
Carg03931Melon (DHL92) v3.6.1carmedB0961
Carg03931Watermelon (Charleston Gray)carwcgB0957
Carg03931Watermelon (Charleston Gray)carwcgB0958
Carg03931Watermelon (Charleston Gray)carwcgB0951
Carg03931Watermelon (Charleston Gray)carwcgB0955
Carg03931Watermelon (97103) v1carwmB0980
Carg03931Watermelon (97103) v1carwmB0978