Carg03927 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCCACCTTCTCCCACCTGCCGCCGTGCAACGCCGCCGCCGCCGCCGTCTCCTCGTCATCTCTCAGACATTATTTCAAGCCAAAAGTTCCCGCGCTATCGTCACCTTCGACGGTACCATTTCGCTCTAAAACTGCCATCAATTGTTCTTCCCCCGCTCATGCCGATGCTTCTGGTATGACACCACATATCTACTTTCTTCTTCTTATTTGAGAAGCCTTTGAGATGCAGTGTTTTCAGTTCAATCTTCGGAACTTGAATTTGACTTATGTTATCGATCCTGTGTGTATTTTCAATCGTCTGAACAAATTGGTTTTTAGCTGAAATCGAGACCTGTATTGTGCATCGTGCAATGGAAACTGAATCTTACTACTCGCAGAACTAGTAGTTGTTATCTTTATATCTTTACTTTTGAACCCTAAATATGCTGTTTGAATGACAGTTCAGACCGATTTCTGCTTTCTGAAGAAGAGGGAATTTGTCTTTTCTGCCGCGCTGCCATTTCTTCTTATTTTGCATGAATCCGTGGAAGTCTTTAGAGCCGAGGCGGCAGAGTAAGATGGAGGATGGAGCTATTGCTTACGATTAATTTGAAGTGTCGAGTATATAGCTTTCTGTATTATTGACTAATATTAACGAGAATTCATGAAGGATCTCAATCATCTACCTTCATCAATCAACACTATTTATTCCATTTATCTTTAGGTCTTAGAAGATGGATTATGAACCGAATTCTGTTTATTTTCTTTCTGGGCAGAAGATTGGATAGAAGTGAAGATGAACGGATAAGAGAAGAAGTAAGGAAGGTAGTAACCAAAGGCAGGGCTCCTGGTCTGCTTCGTCTGGTGTTTCACGATGCTGGAACCTTTGAAATGAACGATAATTCAGGTTAATTTCATAGGCTCCTTTCATTATCCGAATTCATAGACAGATTTTTAATTCTGAGACAACATTGAATGTGTGGTGAACTGTGAACTTTTGTTTGCATCAAACTTGAATTTTATGAGATTACACCGGCTATGATGTCCCCTTATGTATAGGCTTTCTGATATGTTTGTTGTTTTAAAGTTTTCAATATGATCATCATTTTAGCAAGCCATATCATTCTTATGTAGGTGGTATGAATGGGTCTATCATTCACGAACTTAATAGACCTGAAAACAAAGGTCTCAAGAAGTCAGTTAAGGTGATTTTTTCTTTTTGTTGGGTCCTGGTGTTTTATGAGTCTCTTTCCTAGCGAGCTTATCGGAGGTCGTGTTGTTCTCTAGATTCTTGAAGAAGCAAAGAGTAAACTGGATTTAATAAGACCAGGTATATCTGCTCTCTATTTTTCCATTACTATCTGAAGGGAGATAAAAGGTACTGACCAGTAACGAGGCTAACTTGTTAGCAAATTGGGTTTTGAATAGTATCTTGGGCAGACTTAATAGCAGTGGCTGGCGCTGAAGCAGTTTCAATATGTGGAGGTCCAATAATTGCTGTTGAGTTGGGTAGATTAGACTTCGGGTAAGACGAAGCTGGCTGTTTTCCTTGTTATATGAGGAGCCATAGACTTTAACCCAAGCCATTAAACAATATTTTCCTTGAGATGCAATTTGTTAACTTTTGTCTCTTTGCTTTTATTTTTTCCTGAGCTTTATTTGTTAGGATCACACAACAACGTACACACTCATAGAACAAGAGAGAGAAAATGTAAAAGAATATTAGCTAAAGTTTTGCAGTGATAGACTTCGGATATGTACAGATAGAATATAGAGAATATAGAGAATGAGAAAAGTACATGTTCTATATATATGGTTTCAGTTTATTATATATAGTTTTTCTAGATATAACCATCTACTATATATATAAATATCTACCATATATTTCTTTGACAGCTTTTTATTATAAATAGTCGTTTAATATATCACCATTTTTCGCATATAGTTTTAGTATGTATAACAATTGAATAAACTATATCCAACATTCTTTATGCCCAAGAATGGTTCGTTTGGTTCTCTGGATTGTAATGGGTATATTCTCACCATTTTAGCTTTTTCATTGAGCTGTATGCACATGGGAGAGTTTCGACTAATGAGAACCTCTCTCTTTAATATTCAACTGATTGTTTCTGTGCCTAATTCTATGAAGTTCCCTCACTATGTCCACACTTTCTCTGTTAACCCTGTTTCCTGCCAAGTGTTATCCCCATGCTAACCTGCTTTCTAACCAAGTTTTATGTCCATATGCGGTAGACCATTCTAGCTAACTAATTTCCTGTGCTCCTACTATCATTATTATCATTTTTTCATCATACAAGTAAAAATTGGGTAGGAGGTTTGTTCATGACAATTTTAGCTGTGTTTTCTGTATCCAAATAGGAAGCCAGATCCTGAAGGTAAACTTCCTGAAGAATCCTTGGATGCTGTTGGACTGAAGCAAATCTTCAGCAAAAAAGGATTCGCGTGAGTGCATCTGCTAACTAACTGTTTTTCTATTTGGTATTTTTATTTTCATTTGCATCTTTTCTTCTTGGCTAATACATTCTAAGTTATTGTGTTGCTCTCTTTCATATAATTATTTCCTAGCGTGGCTGACTTGATAATAGTTTCTAAGTTATTATCTGGATTCCTTTTCGGCTACATAACTCAGCGAATGAGTCAAGTCCATTATTAAAATGGACATTTAGTCATGGGAAATACTGCCTCTGTATGTGATTGCATGATACAATCCTTTTAACCATGTTGTCCAATCTTGTTATTTACGAACACATAGACAGTAGAAGAGAAATTAATGTAACAGCTCAAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTCGGCTTTCTCTTTCGGGCTTCATCTCAAAAATTTTTAAATGCCTCTGCTAGAGAGGGAGAGGTTTCCACACTCTTATAAAAAATGTTTCCGTCTCCTCTCCAACCGATATGGGATCTCACCGTTGAAAATGATGGTGGCACTCTAGAAATCTGCCCATTATCAGTCACATCCTTCACCTCAGGCCTAAAAGTGCAAATTCCAAATAATTCATAATAGATTGAATTTACCTGTACAGTGACTTCTGCAAGATTAAAGAAGGAAATTTATGGATGCTGTTTTTCTTTGCAGAACACGGGAACTAGTTGCTCTATCTGGAGCCCATACTATTGGTGGTAAAGGTTTTGGAAGCCCTGTTGTTTTTGATAATGCATATTTCAAAATCCTTTTGGAGAAGCCATGGTCATCTAAGGGTAATCAATCTCATAACAATGTGTTCATACTTCTGATGTTTGAATTAAATCAAGCCTCAATTGCAAACCATTGGCTACATGACTCACTGCCTTCATTCCTGCTCAAATCCTCATTATTTAGTATGCCTTTAAATCAAATTTAATGCTGAACTGCTACATAGGTATTAGCTGTTAGTTTTACCATTGATCAATAATGCATGCCATTTCCTTGAATTGGTTAATACATATTTCCACTCAGATCTTATTTTACTTTTTTAATTTTAGGTGGTATGTCCAGTATGATAGGGCTGCCTTCTGATCGTGCTCTTGCTGATGATGATGAATGCTTGAGGTTCTTCTCTTTCATTCAAATCTTTACTAGTTTCACCATAATTTCTCTGCATCACTGTATTTGAGTAAGAATTATAAGAATGGGTTCAATTTGTTGAACTAAAGTAGAAAAGTCGTAAAGATTTAAGAGATAGACAGAAAATTAGCTGATTAACTGAAGTAATTTACTTTGAACTCATAGATGGATCAAAGAGTACGCCAACAATCAGAATGTGTTCTTCGAAGATTTCCAGAATGCTTATATCAAGCTAGTGAATTCTGGTGCGAAGTGGAAAAGCTAGCAAACACCTATACAACAATTATACACACTGGAAATCATGGTCTAACTGCTTTCTATAATTGGATATGGCATTGGCTTCGACGATGACTTAGAGTCAATTCTTATCTGCTTGATCCGTTGCTGGTGGGATGTAACTGCGAGACAAAGCAAGAGTTGCGATGAAGATAAAGCTTGGAAGTGCCTTATGCCCTCATCAACATCCAAGTGCCCTCTGAAGCTTTATCTTTTGTTGGCCCAAATTTTGGCCTTCAAGCATTTTATATCTCATCATGAAGACAAAAT ATGACTTCCACCTTCTCCCACCTGCCGCCGTGCAACGCCGCCGCCGCCGCCGTCTCCTCGTCATCTCTCAGACATTATTTCAAGCCAAAAGTTCCCGCGCTATCGTCACCTTCGACGGTACCATTTCGCTCTAAAACTGCCATCAATTGTTCTTCCCCCGCTCATGCCGATGCTTCTGTTCAGACCGATTTCTGCTTTCTGAAGAAGAGGGAATTTGTCTTTTCTGCCGCGCTGCCATTTCTTCTTATTTTGCATGAATCCGTGGAAGTCTTTAGAGCCGAGGCGGCAGAAAGATTGGATAGAAGTGAAGATGAACGGATAAGAGAAGAAGTAAGGAAGGTAGTAACCAAAGGCAGGGCTCCTGGTCTGCTTCGTCTGGTGTTTCACGATGCTGGAACCTTTGAAATGAACGATAATTCAGGTGGTATGAATGGGTCTATCATTCACGAACTTAATAGACCTGAAAACAAAGGTCTCAAGAAGTCAGTTAAGATTCTTGAAGAAGCAAAGAGTAAACTGGATTTAATAAGACCAGTATCTTGGGCAGACTTAATAGCAGTGGCTGGCGCTGAAGCAGTTTCAATATGTGGAGGTCCAATAATTGCTGTTGAGTTGGGTAGATTAGACTTCGGGAAGCCAGATCCTGAAGGTAAACTTCCTGAAGAATCCTTGGATGCTGTTGGACTGAAGCAAATCTTCAGCAAAAAAGGATTCGCAACACGGGAACTAGTTGCTCTATCTGGAGCCCATACTATTGGTGGTAAAGGTTTTGGAAGCCCTGTTGTTTTTGATAATGCATATTTCAAAATCCTTTTGGAGAAGCCATGGTCATCTAAGGGTGGTATGTCCAGTATGATAGGGCTGCCTTCTGATCGTGCTCTTGCTGATGATGATGAATGCTTGAGATGGATCAAAGAGTACGCCAACAATCAGAATGTGTTCTTCGAAGATTTCCAGAATGCTTATATCAAGCTAGTGAATTCTGGTGCGAAGTGGAAAAGCTAGCAAACACCTATACAACAATTATACACACTGGAAATCATGGTCTAACTGCTTTCTATAATTGGATATGGCATTGGCTTCGACGATGACTTAGAGTCAATTCTTATCTGCTTGATCCGTTGCTGGTGGGATGTAACTGCGAGACAAAGCAAGAGTTGCGATGAAGATAAAGCTTGGAAGTGCCTTATGCCCTCATCAACATCCAAGTGCCCTCTGAAGCTTTATCTTTTGTTGGCCCAAATTTTGGCCTTCAAGCATTTTATATCTCATCATGAAGACAAAAT ATGACTTCCACCTTCTCCCACCTGCCGCCGTGCAACGCCGCCGCCGCCGCCGTCTCCTCGTCATCTCTCAGACATTATTTCAAGCCAAAAGTTCCCGCGCTATCGTCACCTTCGACGGTACCATTTCGCTCTAAAACTGCCATCAATTGTTCTTCCCCCGCTCATGCCGATGCTTCTGTTCAGACCGATTTCTGCTTTCTGAAGAAGAGGGAATTTGTCTTTTCTGCCGCGCTGCCATTTCTTCTTATTTTGCATGAATCCGTGGAAGTCTTTAGAGCCGAGGCGGCAGAAAGATTGGATAGAAGTGAAGATGAACGGATAAGAGAAGAAGTAAGGAAGGTAGTAACCAAAGGCAGGGCTCCTGGTCTGCTTCGTCTGGTGTTTCACGATGCTGGAACCTTTGAAATGAACGATAATTCAGGTGGTATGAATGGGTCTATCATTCACGAACTTAATAGACCTGAAAACAAAGGTCTCAAGAAGTCAGTTAAGATTCTTGAAGAAGCAAAGAGTAAACTGGATTTAATAAGACCAGTATCTTGGGCAGACTTAATAGCAGTGGCTGGCGCTGAAGCAGTTTCAATATGTGGAGGTCCAATAATTGCTGTTGAGTTGGGTAGATTAGACTTCGGGAAGCCAGATCCTGAAGGTAAACTTCCTGAAGAATCCTTGGATGCTGTTGGACTGAAGCAAATCTTCAGCAAAAAAGGATTCGCAACACGGGAACTAGTTGCTCTATCTGGAGCCCATACTATTGGTGGTAAAGGTTTTGGAAGCCCTGTTGTTTTTGATAATGCATATTTCAAAATCCTTTTGGAGAAGCCATGGTCATCTAAGGGTGGTATGTCCAGTATGATAGGGCTGCCTTCTGATCGTGCTCTTGCTGATGATGATGAATGCTTGAGATGGATCAAAGAGTACGCCAACAATCAGAATGTGTTCTTCGAAGATTTCCAGAATGCTTATATCAAGCTAGTGAATTCTGGTGCGAAGTGGAAAAGCTAG MTSTFSHLPPCNAAAAAVSSSSLRHYFKPKVPALSSPSTVPFRSKTAINCSSPAHADASVQTDFCFLKKREFVFSAALPFLLILHESVEVFRAEAAERLDRSEDERIREEVRKVVTKGRAPGLLRLVFHDAGTFEMNDNSGGMNGSIIHELNRPENKGLKKSVKILEEAKSKLDLIRPVSWADLIAVAGAEAVSICGGPIIAVELGRLDFGKPDPEGKLPEESLDAVGLKQIFSKKGFATRELVALSGAHTIGGKGFGSPVVFDNAYFKILLEKPWSSKGGMSSMIGLPSDRALADDDECLRWIKEYANNQNVFFEDFQNAYIKLVNSGAKWKS
BLAST of Carg03927 vs. NCBI nr
Match: XP_023538615.1 (putative L-ascorbate peroxidase 6 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 641.3 bits (1653), Expect = 1.8e-180 Identity = 327/333 (98.20%), Postives = 328/333 (98.50%), Query Frame = 0
BLAST of Carg03927 vs. NCBI nr
Match: XP_023538616.1 (putative L-ascorbate peroxidase 6 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 635.2 bits (1637), Expect = 1.3e-178 Identity = 326/333 (97.90%), Postives = 327/333 (98.20%), Query Frame = 0
BLAST of Carg03927 vs. NCBI nr
Match: XP_022951406.1 (putative L-ascorbate peroxidase 6 isoform X1 [Cucurbita moschata]) HSP 1 Score: 632.5 bits (1630), Expect = 8.2e-178 Identity = 325/334 (97.31%), Postives = 328/334 (98.20%), Query Frame = 0
BLAST of Carg03927 vs. NCBI nr
Match: XP_022951407.1 (putative L-ascorbate peroxidase 6 isoform X2 [Cucurbita moschata]) HSP 1 Score: 625.9 bits (1613), Expect = 7.7e-176 Identity = 324/334 (97.01%), Postives = 327/334 (97.90%), Query Frame = 0
BLAST of Carg03927 vs. NCBI nr
Match: XP_023002417.1 (putative L-ascorbate peroxidase 6 isoform X1 [Cucurbita maxima]) HSP 1 Score: 622.9 bits (1605), Expect = 6.5e-175 Identity = 319/334 (95.51%), Postives = 323/334 (96.71%), Query Frame = 0
BLAST of Carg03927 vs. TAIR10
Match: AT4G32320.1 (ascorbate peroxidase 6) HSP 1 Score: 344.0 bits (881), Expect = 1.1e-94 Identity = 170/261 (65.13%), Postives = 211/261 (80.84%), Query Frame = 0
BLAST of Carg03927 vs. TAIR10
Match: AT3G09640.1 (ascorbate peroxidase 2) HSP 1 Score: 147.1 bits (370), Expect = 1.9e-35 Identity = 88/238 (36.97%), Postives = 138/238 (57.98%), Query Frame = 0
BLAST of Carg03927 vs. TAIR10
Match: AT4G35970.1 (ascorbate peroxidase 5) HSP 1 Score: 146.7 bits (369), Expect = 2.5e-35 Identity = 94/240 (39.17%), Postives = 138/240 (57.50%), Query Frame = 0
BLAST of Carg03927 vs. TAIR10
Match: AT4G35000.1 (ascorbate peroxidase 3) HSP 1 Score: 132.5 bits (332), Expect = 4.8e-31 Identity = 84/240 (35.00%), Postives = 128/240 (53.33%), Query Frame = 0
BLAST of Carg03927 vs. TAIR10
Match: AT1G07890.3 (ascorbate peroxidase 1) HSP 1 Score: 129.0 bits (323), Expect = 5.3e-30 Identity = 80/239 (33.47%), Postives = 134/239 (56.07%), Query Frame = 0
BLAST of Carg03927 vs. Swiss-Prot
Match: sp|Q8GY91|APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana OX=3702 GN=APX6 PE=2 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.9e-93 Identity = 170/261 (65.13%), Postives = 211/261 (80.84%), Query Frame = 0
BLAST of Carg03927 vs. Swiss-Prot
Match: sp|Q1PER6|APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana OX=3702 GN=APX2 PE=2 SV=3) HSP 1 Score: 147.1 bits (370), Expect = 3.4e-34 Identity = 88/238 (36.97%), Postives = 138/238 (57.98%), Query Frame = 0
BLAST of Carg03927 vs. Swiss-Prot
Match: sp|Q7XZP5|APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=APX5 PE=1 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 4.5e-34 Identity = 94/240 (39.17%), Postives = 138/240 (57.50%), Query Frame = 0
BLAST of Carg03927 vs. Swiss-Prot
Match: sp|Q6ZJJ1|APX4_ORYSJ (Probable L-ascorbate peroxidase 4, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=APX4 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-33 Identity = 87/238 (36.55%), Postives = 135/238 (56.72%), Query Frame = 0
BLAST of Carg03927 vs. Swiss-Prot
Match: sp|Q0JEQ2|APX3_ORYSJ (Probable L-ascorbate peroxidase 3, peroxisomal OS=Oryza sativa subsp. japonica OX=39947 GN=APX3 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.5e-32 Identity = 86/241 (35.68%), Postives = 138/241 (57.26%), Query Frame = 0
BLAST of Carg03927 vs. TrEMBL
Match: tr|A0A1S3BBP4|A0A1S3BBP4_CUCME (putative L-ascorbate peroxidase 6 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488313 PE=3 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 6.3e-150 Identity = 284/337 (84.27%), Postives = 300/337 (89.02%), Query Frame = 0
BLAST of Carg03927 vs. TrEMBL
Match: tr|A0A0A0LQ87|A0A0A0LQ87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381780 PE=3 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 1.4e-149 Identity = 284/340 (83.53%), Postives = 300/340 (88.24%), Query Frame = 0
BLAST of Carg03927 vs. TrEMBL
Match: tr|A0A1S3BC45|A0A1S3BC45_CUCME (putative L-ascorbate peroxidase 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488313 PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 3.8e-131 Identity = 255/306 (83.33%), Postives = 270/306 (88.24%), Query Frame = 0
BLAST of Carg03927 vs. TrEMBL
Match: tr|A0A1S3BCW6|A0A1S3BCW6_CUCME (putative L-ascorbate peroxidase 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488313 PE=3 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 3.6e-129 Identity = 254/306 (83.01%), Postives = 269/306 (87.91%), Query Frame = 0
BLAST of Carg03927 vs. TrEMBL
Match: tr|A0A1S3BD10|A0A1S3BD10_CUCME (putative L-ascorbate peroxidase 6 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488313 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.4e-128 Identity = 253/306 (82.68%), Postives = 268/306 (87.58%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |